vOTU vOTU-171033

vOTU: vOTU-171033

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-171033
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium disporicum
Taxonomy (UHGV)	vFAM-00114 → vSUBFAM-03921 → vOTU-171033
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp900547475
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0369582
Biosample ID	N/A
Genome length (bp)	23,270 bps
CheckV completeness	51.44% (Medium-quality)
CDS count	46
CDS density	87.19%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp900547475	Total connections	14	Host agreement	92.86
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium disporicum	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0369582_1	phrog_29	239.3	0	major head protein	head and packaging
UniRef90	UHGV-0369582_1	UniRef90_A0A1C6KXX0	618.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0369582_1	1280692.AUJL01000004_gene846	626.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0369582_1	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0369582_1	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_2	phrog_909	77.4	1.6e-22	major head protein	head and packaging
UniRef90	UHGV-0369582_2	UniRef90_UPI001D2572A1	187.0	0	head decoration protein	N/A
eggNOG-mapper	UHGV-0369582_2	1280692.AUJL01000004_gene847	190.0	0	N/A	N/A
PHROG	UHGV-0369582_3	phrog_172	73.3	4.6e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-0369582_3	UniRef90_UPI00189A475E	348.0	0	N/A	N/A
eggNOG-mapper	UHGV-0369582_3	1280692.AUJL01000004_gene848	326.0	0	N/A	N/A
Pfam	UHGV-0369582_3	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0369582_3	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_4	phrog_15580	40.2	0.00000000005	N/A	unknown function
PHROG	UHGV-0369582_5	phrog_115	132.8	2.2e-39	minor head protein	head and packaging
UniRef90	UHGV-0369582_5	UniRef90_UPI00164A61BC	471.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0369582_5	1499683.CCFF01000017_gene2578	265.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0369582_5	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0369582_5	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0369582_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0369582_5	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_6	phrog_64	289.0	0	portal protein	head and packaging
UniRef90	UHGV-0369582_6	UniRef90_A0A1C6KXQ6	865.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0369582_6	1280692.AUJL01000004_gene853	741.0	0	portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0369582_6	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0369582_6	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0369582_7	K06909	398.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0369582_7	phrog_3717	250.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0369582_7	UniRef90_A0A1I3PY95	758.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0369582_7	1499683.CCFF01000005_gene64	711.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0369582_7	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0369582_7	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0369582_7	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0369582_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0369582_7	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_8	phrog_10934	114.0	5.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-0369582_8	565664.EFXG_02687	122.0	6.83e-36	N/A	N/A
KOfam	UHGV-0369582_9	K14060	84.1	2.1e-24	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0369582_9	phrog_125	151.2	5.60519e-45	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0369582_9	UniRef90_A0A1C6KYB1	409.0	0	Transposon Tn1000 resolvase	N/A
eggNOG-mapper	UHGV-0369582_9	1540257.JQMW01000013_gene749	279.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0369582_9	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0369582_9	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0369582_9	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_10	phrog_606	86.9	2e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0369582_10	UniRef90_A0A1I3PZ25	155.0	0	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0369582_10	999411.HMPREF1092_03330	163.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0369582_10	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0369582_12	phrog_17021	76.3	2.9e-22	N/A	unknown function
UniRef90	UHGV-0369582_12	UniRef90_Q8SBK6	61.2	0.0000000000315	Gp48 protein	N/A
eggNOG-mapper	UHGV-0369582_13	1280692.AUJL01000025_gene2086	112.0	7.4e-32	N/A	N/A
PHROG	UHGV-0369582_14	phrog_36	63.8	2.2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0369582_14	UniRef90_A0A1C6KXU9	315.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-0369582_14	1031288.AXAA01000059_gene1754	145.0	7.20968e-42	N/A	N/A
structural_annotation	UHGV-0369582_14	PF08281,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0369582_16	K04763	224.6	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0369582_16	phrog_1	180.0	0	integrase	integration and excision
UniRef90	UHGV-0369582_16	UniRef90_A0A1C6KY93	651.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0369582_16	536233.CLO_1819	278.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0369582_16	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0369582_16	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0369582_16	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0369582_16	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0369582_19	UniRef90_UPI00037862BA	597.0	0	N/A	N/A
eggNOG-mapper	UHGV-0369582_19	666686.B1NLA3E_02410	527.0	0	N/A	N/A
Pfam	UHGV-0369582_19	PF12686	N/A	N/A	N/A	DUF3800
PHROG	UHGV-0369582_22	phrog_2245	79.5	4.4e-23	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0369582_22	UniRef90_N9WF59	87.0	2.58e-20	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0369582_22	1519439.JPJG01000059_gene1914	58.2	0.00000000158	N/A	N/A
eggNOG-mapper	UHGV-0369582_23	1414720.CBYM010000001_gene681	358.0	0	N/A	N/A
PHROG	UHGV-0369582_24	phrog_28936	201.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0369582_24	573061.Clocel_3563	221.0	0	N/A	N/A
structural_annotation	UHGV-0369582_24	PF11645,MF_01490,NF040854	N/A	N/A	N/A	N/A
KOfam	UHGV-0369582_25	K03111	132.8	4.2e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0369582_25	phrog_44	138.7	3.59994e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0369582_25	UniRef90_A0A1C6KXJ1	254.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0369582_25	545697.HMPREF0216_02833	226.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0369582_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0369582_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0369582_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0369582_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0369582_25	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0369582_26	1196322.A370_02042	67.8	0.000000000000309	N/A	N/A
PHROG	UHGV-0369582_27	phrog_1770	65.9	7e-19	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0369582_27	536233.CLO_1822	239.0	0	N/A	N/A
structural_annotation	UHGV-0369582_27	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_29	phrog_25509	73.4	2.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0369582_29	1196322.A370_05735	90.5	1.92e-22	N/A	N/A
PHROG	UHGV-0369582_31	phrog_2514	128.2	5.5e-38	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0369582_31	UniRef90_A0A174F2L9	274.0	0	N/A	N/A
eggNOG-mapper	UHGV-0369582_31	1415775.U729_2588	224.0	0	DnaD domain protein	N/A
COG	UHGV-0369582_31	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0369582_31	PF09681,PF17214,MF_01819,TIGR01714,COG5529	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0369582_32	PF19849	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_33	phrog_155	173.9	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0369582_33	UniRef90_A0A1C6HTX6	341.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-0369582_33	386415.NT01CX_2192	221.0	0	ERF superfamily	N/A
Pfam	UHGV-0369582_33	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0369582_33	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0369582_34	phrog_2205	150.6	5.60519e-45	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0369582_34	UniRef90_UPI00164B837B	293.0	0	host-nuclease inhibitor Gam family protein	N/A
eggNOG-mapper	UHGV-0369582_34	1415774.U728_1122	202.0	0	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0369582_34	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-0369582_34	PF07352	N/A	N/A	N/A	N/A
UniRef90	UHGV-0369582_35	UniRef90_A0A1C6HV05	56.6	0.00000000638	Spo0E like sporulation regulatory protein	N/A
Pfam	UHGV-0369582_42	PF08271	N/A	N/A	TFIIB zinc-binding	TF_Zn_Ribbon

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0369582	Yes	23,270	30	51	1