vOTU vOTU-171232

vOTU: vOTU-171232

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-171232
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp003516765
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00116 → vOTU-171232
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1421366
Biosample ID	SAMN02334036
Genome length (bp)	23,055 bps
CheckV completeness	54.04% (Medium-quality)
CDS count	36
CDS density	99.19%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	59	Host agreement	93.22
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp003516765	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1421366_1	K00390	103.3	2.4e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1421366_1	phrog_424	121.0	9.2e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1421366_1	UniRef90_UPI001D087498	425.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1421366_1	1408437.JNJN01000032_gene2312	335.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1421366_1	BrxP_00001	64.3	1e-18	BrxP	BREX
Pfam	UHGV-1421366_1	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1421366_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1421366_1	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_3	phrog_3136	134.9	2.69999e-40	N/A	unknown function
UniRef90	UHGV-1421366_3	UniRef90_A0A3D0HBD2	121.0	3.09e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1421366_3	642492.Clole_1416	67.4	0.00000000000193	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1421366_3	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1421366_3	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1421366_3	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_4	phrog_38832	48.8	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1421366_4	1232443.BAIA02000078_gene48	50.1	0.00000568	N/A	N/A
structural_annotation	UHGV-1421366_4	PF11717,TIGR02450	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421366_8	UniRef90_A0A1C6DFA0	197.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1421366_8	935948.KE386495_gene2250	105.0	3.18e-26	N/A	N/A
Pfam	UHGV-1421366_8	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1421366_8	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_9	phrog_1770	45.2	0.0000000000013	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1421366_9	536233.CLO_1822	124.0	1.35e-33	N/A	N/A
structural_annotation	UHGV-1421366_9	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421366_10	PF04606,NF007241	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_11	phrog_24386	239.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1421366_11	478749.BRYFOR_08546	229.0	0	UMP catabolic process	N/A
COG	UHGV-1421366_11	COG0647	N/A	N/A	Ribonucleotide monophosphatase NagD, HAD superfamily	N/A
PHROG	UHGV-1421366_12	phrog_801	58.3	1.6e-16	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1421366_12	UniRef90_A0A316M891	99.8	6.32e-25	N/A	N/A
eggNOG-mapper	UHGV-1421366_12	551790.B5BTW0_9CAUD	55.1	0.000000145	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1421366_12	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1421366_12	PF18909	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421366_13	742738.HMPREF9460_02503	94.4	7.99e-24	N/A	N/A
structural_annotation	UHGV-1421366_13	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421366_14	UniRef90_UPI00164C5C54	154.0	1.4013e-45	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1421366_14	1226322.HMPREF1545_00042	133.0	2.09e-38	N/A	N/A
structural_annotation	UHGV-1421366_14	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-1421366_15	K06909	376.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1421366_15	phrog_3717	160.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1421366_15	UniRef90_A0A2U1BEH4	718.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1421366_15	1123511.KB905868_gene187	473.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1421366_15	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1421366_15	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1421366_15	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1421366_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1421366_15	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_16	phrog_533	359.4	0	portal protein	head and packaging
UniRef90	UHGV-1421366_16	UniRef90_UPI0006C81717	701.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1421366_16	1226322.HMPREF1545_00044	610.0	0	N/A	N/A
Pfam	UHGV-1421366_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1421366_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_17	phrog_581	289.2	0	minor head protein	head and packaging
UniRef90	UHGV-1421366_17	UniRef90_A0A1C5N7V1	480.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1421366_17	1226322.HMPREF1545_00046	368.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1421366_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1421366_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421366_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_18	phrog_29211	44.0	0.0000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1421366_20	1232443.BAIA02000078_gene31	93.2	1.21e-21	N/A	N/A
structural_annotation	UHGV-1421366_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_21	phrog_10	171.4	0	major head protein	head and packaging
UniRef90	UHGV-1421366_21	UniRef90_A0A2U1BEF2	501.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1421366_21	1226322.HMPREF1545_00050	471.0	0	Phage capsid family	N/A
Pfam	UHGV-1421366_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1421366_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1421366_21	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1421366_21	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_22	phrog_541	100.6	1e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-1421366_22	642492.Clole_0822	62.8	0.000000000124	N/A	N/A
PHROG	UHGV-1421366_23	phrog_3366	101.4	7.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1421366_23	1226322.HMPREF1545_00053	170.0	0	N/A	N/A
structural_annotation	UHGV-1421366_23	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_24	phrog_556	71.1	1.4e-20	minor head protein	head and packaging
UniRef90	UHGV-1421366_24	UniRef90_UPI00195E1497	202.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1421366_24	1226322.HMPREF1545_00054	170.0	0	Minor capsid protein	N/A
Pfam	UHGV-1421366_24	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1421366_24	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_25	phrog_3266	48.0	0.00000000000017	tail completion	connector
eggNOG-mapper	UHGV-1421366_25	1232443.BAIA02000078_gene24	172.0	0	N/A	N/A
structural_annotation	UHGV-1421366_25	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_26	phrog_3099	88.0	1.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1421366_26	1235797.C816_04186	231.0	0	N/A	N/A
structural_annotation	UHGV-1421366_26	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_27	phrog_11299	74.8	1.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-1421366_27	693746.OBV_18160	188.0	0	N/A	N/A
structural_annotation	UHGV-1421366_27	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_28	phrog_706	120.2	1.5e-35	N/A	unknown function
UniRef90	UHGV-1421366_28	UniRef90_UPI000682A80B	223.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1421366_28	693746.OBV_18170	216.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1421366_28	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1421366_28	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_29	phrog_1535	115.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1421366_29	UniRef90_A0A810PX76	166.0	2.51e-39	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1421366_29	693746.OBV_18190	197.0	0	domain protein	N/A
COG	UHGV-1421366_29	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421366_29	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_30	phrog_1194	77.6	1.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-1421366_30	411902.CLOBOL_00125	116.0	1.11e-31	N/A	N/A
structural_annotation	UHGV-1421366_30	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_31	phrog_13879	249.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1421366_31	1226322.HMPREF1545_00061	360.0	0	N/A	N/A
structural_annotation	UHGV-1421366_31	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_32	phrog_18725	56.0	3.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1421366_32	1226322.HMPREF1545_00062	82.8	9.11e-18	N/A	N/A
Pfam	UHGV-1421366_33	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1421366_33	PF09826,MF_03001,TIGR04528,COG2706	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421366_34	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1421366_36	phrog_19111	41.8	0.000000000008	N/A	unknown function
COG	UHGV-1421366_36	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1421366	Yes	23,055	53	54	1