vOTU vOTU-171423

vOTU: vOTU-171423

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-171423
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00262 → vSUBFAM-04594 → vOTU-171423
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Longicatena → Longicatena caecimuris
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0381495
Biosample ID	SAMN07259901
Genome length (bp)	38,352 bps
CheckV completeness	56.03% (Medium-quality)
CDS count	65
CDS density	85.62%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Longicatena → Longicatena caecimuris	Total connections	25	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Longicatena → Longicatena caecimuris	Total connections	7	Host agreement	85.71

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 56.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0381495_2	phrog_5319	60.5	2.4e-17	outer membrane protein	other
eggNOG-mapper	UHGV-0381495_2	1042156.CXIVA_15870	95.1	3.4e-19	sh3 domain protein	N/A
COG	UHGV-0381495_2	COG3103	N/A	N/A	N/A	N/A
UniRef90	UHGV-0381495_3	UniRef90_UPI00059AA7B8	93.2	1.26e-22	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0381495_3	658659.HMPREF0983_03305	77.0	5.95e-17	N/A	N/A
KOfam	UHGV-0381495_4	K22300	60.5	4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0381495_4	phrog_8	66.8	4.6e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0381495_4	UniRef90_A0A372T150	160.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0381495_4	1136177.KCA1_3008	69.3	0.000000000000512	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0381495_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0381495_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0381495_5	UniRef90_A0A223MJQ8	86.3	1.24e-20	N/A	N/A
eggNOG-mapper	UHGV-0381495_5	626523.GCWU000342_01049	75.5	2.86e-17	N/A	N/A
Pfam	UHGV-0381495_5	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0381495_5	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0381495_5	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0381495_6	K07741	99.9	6e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0381495_6	phrog_63	185.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0381495_6	UniRef90_UPI000ADC2C60	380.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0381495_6	1123250.KB908434_gene5	224.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0381495_6	PF10543	N/A	N/A	ORF6N domain	ORF6N
Pfam	UHGV-0381495_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0381495_6	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0381495_6	PF03374,PF10543,TIGR02681,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0381495_8	UniRef90_UPI001BAC953F	82.0	1.08e-16	XRE family transcriptional regulator	N/A
Pfam	UHGV-0381495_11	PF10367	N/A	N/A	Vacuolar sorting protein 39 domain 2	Vps39_2
PHROG	UHGV-0381495_12	phrog_434	145.4	3.9937e-43	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_12	UniRef90_A0A372SUY9	422.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0381495_12	428127.EUBDOL_01507	333.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0381495_12	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0381495_12	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0381495_12	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0381495_12	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_13	phrog_4400	297.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0381495_13	886882.PPSC2_p0514	167.0	0	N/A	N/A
dbAPIS	UHGV-0381495_13	APIS008	N/A	N/A	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	N/A
structural_annotation	UHGV-0381495_13	PF01743,MF_00957,TIGR01942,COG0617	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_14	phrog_674	60.9	2e-17	N/A	unknown function
UniRef90	UHGV-0381495_14	UniRef90_A0A417JGK8	376.0	0	N/A	N/A
Pfam	UHGV-0381495_14	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0381495_14	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_16	phrog_3657	287.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0381495_16	458233.MCCL_0909	224.0	0	N/A	N/A
KOfam	UHGV-0381495_18	K17080	91.2	3.5e-27	PHB1; prohibitin 1	N/A
PHROG	UHGV-0381495_18	phrog_200	149.0	2.8026e-44	lipoprotein	other
UniRef90	UHGV-0381495_18	UniRef90_A0A223MJP1	334.0	0	PHB domain-containing protein	N/A
eggNOG-mapper	UHGV-0381495_18	33035.JPJF01000066_gene3563	193.0	0	prohibitin homologues	N/A
Pfam	UHGV-0381495_18	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-0381495_18	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-0381495_18	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_19	phrog_997	87.8	1.1e-25	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_19	UniRef90_UPI001C0ED106	75.9	0.00000000000000932	replication terminator protein	N/A
eggNOG-mapper	UHGV-0381495_19	1486428.A0A097BY30_9CAUD	73.9	0.00000000000000829	N/A	N/A
PHROG	UHGV-0381495_20	phrog_1029	218.5	0	N/A	unknown function
UniRef90	UHGV-0381495_20	UniRef90_M1QIB9	156.0	1.23314e-43	Phage-related protein	N/A
eggNOG-mapper	UHGV-0381495_20	1232449.BAHV02000016_gene1838	221.0	0	N/A	N/A
structural_annotation	UHGV-0381495_20	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_21	phrog_1770	42.7	0.00000000001	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_21	UniRef90_A0A832L5E4	147.0	1.75022e-42	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-0381495_21	536233.CLO_1822	135.0	2.55e-38	N/A	N/A
structural_annotation	UHGV-0381495_21	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0381495_23	1336234.JAGN01000004_gene538	54.7	0.000000166	N/A	N/A
PHROG	UHGV-0381495_24	phrog_2514	144.4	7.39886e-43	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_24	UniRef90_A0A544TWL6	158.0	3.22299e-44	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0381495_24	649747.HMPREF0083_01050	149.0	1.90997e-41	primosome component and related proteins	N/A
COG	UHGV-0381495_24	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0381495_24	PF09681,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0381495_25	K02315	123.4	2.5e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0381495_25	phrog_50	111.2	1.2e-32	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_25	UniRef90_UPI00163D4A7C	384.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0381495_25	1211844.CBLM010000016_gene1509	235.0	0	N/A	N/A
Pfam	UHGV-0381495_25	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0381495_25	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0381495_25	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_26	phrog_9298	71.7	9.2e-21	radical SAM domain protein	other
UniRef90	UHGV-0381495_26	UniRef90_A0A372SUR7	251.0	0	CTP_transf_like domain-containing protein	N/A
eggNOG-mapper	UHGV-0381495_26	357809.Cphy_0505	98.2	3.13e-23	N/A	N/A
COG	UHGV-0381495_26	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
KOfam	UHGV-0381495_28	K03111	147.5	1.30321e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0381495_28	phrog_44	153.0	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_28	UniRef90_U5FBV2	255.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0381495_28	552396.HMPREF0863_00560	255.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0381495_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0381495_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0381495_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0381495_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0381495_28	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0381495_29	K07074	55.8	9.6e-16	N/A	N/A
PHROG	UHGV-0381495_29	phrog_388	49.9	0.000000000000011	nucleotidyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_29	UniRef90_A0A843FSU3	130.0	2.08e-32	Nucleotidyltransferase domain-containing protein	N/A
Pfam	UHGV-0381495_29	PF10127	N/A	N/A	RNA repair pathway DNA polymerase beta family	RlaP
structural_annotation	UHGV-0381495_32	PF04319,TIGR00686	N/A	N/A	N/A	N/A
Pfam	UHGV-0381495_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0381495_33	PF08281,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_35	phrog_59	136.3	2.70002e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_35	UniRef90_A0A481YQJ4	134.0	1.5e-33	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0381495_35	357276.EL88_11520	116.0	9.78e-30	HNH endonuclease domain protein	N/A
PADLOC	UHGV-0381495_35	HEase_00016	83.4	1.4e-26	homing endonuclease	RM
Pfam	UHGV-0381495_35	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0381495_35	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0381495_35	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-0381495_35	PF07453	N/A	N/A	N/A	N/A
UniRef90	UHGV-0381495_41	UniRef90_UPI001D07B715	87.0	1.4e-17	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0381495_41	1235793.C809_00539	60.1	0.0000000263	N/A	N/A
Pfam	UHGV-0381495_41	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0381495_42	phrog_355	48.6	0.00000000000013	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381495_42	UniRef90_UPI00067EC354	131.0	6.03e-38	N/A	N/A
eggNOG-mapper	UHGV-0381495_42	999411.HMPREF1092_00897	112.0	4.04e-31	N/A	N/A
Pfam	UHGV-0381495_42	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0381495_42	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_43	phrog_774	59.3	8.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-0381495_43	397290.C810_05225	84.3	3.15e-20	N/A	N/A
PHROG	UHGV-0381495_46	phrog_38	196.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0381495_46	UniRef90_UPI001D063AE7	498.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0381495_46	476272.RUMHYD_01940	389.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0381495_46	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0381495_46	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0381495_46	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_48	phrog_64	191.2	0	portal protein	head and packaging
UniRef90	UHGV-0381495_48	UniRef90_A0A374HKE8	415.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0381495_48	1121866.AUGK01000003_gene1429	337.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0381495_48	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0381495_48	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0381495_49	UniRef90_UPI000E41BB01	88.6	1.54e-18	N/A	N/A
eggNOG-mapper	UHGV-0381495_49	1232453.BAIF02000058_gene1626	87.0	1.25e-18	N/A	N/A
structural_annotation	UHGV-0381495_49	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_50	phrog_909	64.8	1.3e-18	major head protein	head and packaging
eggNOG-mapper	UHGV-0381495_50	1298920.KI911353_gene2661	72.0	0.00000000000000875	N/A	N/A
PHROG	UHGV-0381495_51	phrog_29	157.2	0	major head protein	head and packaging
UniRef90	UHGV-0381495_51	UniRef90_UPI000CDB6260	338.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0381495_51	476272.RUMHYD_01946	250.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0381495_51	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0381495_51	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_53	phrog_132	41.0	0.000000000027	head-tail adaptor	connector
UniRef90	UHGV-0381495_53	UniRef90_A0A7C7ERG0	86.3	1.38e-19	DNA-packaging protein	N/A
structural_annotation	UHGV-0381495_53	TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0381495_54	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0381495_56	1235800.C819_00481	63.9	0.000000000199	N/A	N/A
structural_annotation	UHGV-0381495_56	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0381495_57	PF08873,COG5003	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0381495_58	PF16463,PF17892,MF_04116,TIGR02241,NF012211,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_61	phrog_9243	53.1	4.1e-16	N/A	unknown function
UniRef90	UHGV-0381495_61	UniRef90_UPI001C0F1652	175.0	0	N/A	N/A
eggNOG-mapper	UHGV-0381495_61	936596.HMPREF1495_0803	149.0	7.9902e-42	N/A	N/A
Pfam	UHGV-0381495_61	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-0381495_61	MF_00052_A,NF011119	N/A	N/A	N/A	N/A
PHROG	UHGV-0381495_62	phrog_373	95.7	5.5e-28	anti-repressor	transcription regulation
UniRef90	UHGV-0381495_62	UniRef90_U5F860	236.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-0381495_62	552396.HMPREF0863_00756	236.0	0	P22_AR N-terminal domain	N/A
COG	UHGV-0381495_62	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
PHROG	UHGV-0381495_64	phrog_1726	141.2	3.80032e-42	anti-repressor	transcription regulation
UniRef90	UHGV-0381495_64	UniRef90_U5F883	413.0	0	Rha family phage regulatory protein	N/A
eggNOG-mapper	UHGV-0381495_64	552396.HMPREF0863_00753	413.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0381495_64	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0381495_64	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0381495_64	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0381495_64	PF09669,PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0381495	Yes	38,352	34	56	1