vOTU vOTU-171563

vOTU: vOTU-171563

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-171563
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00117 → vOTU-171563
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0180050
Biosample ID	N/A
Genome length (bp)	21,864 bps
CheckV completeness	51.64% (Medium-quality)
CDS count	34
CDS density	95.97%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	171	Host agreement	89.47
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0180050_1	K14059	131.1	1.6e-38	int; integrase	N/A
PHROG	UHGV-0180050_1	phrog_1	151.5	7.00649e-45	integrase	integration and excision
UniRef90	UHGV-0180050_1	UniRef90_A0A810Q0Y2	407.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0180050_1	693746.OBV_43340	361.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0180050_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0180050_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0180050_1	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180050_2	1226322.HMPREF1545_00079	107.0	8.94e-29	N/A	N/A
structural_annotation	UHGV-0180050_3	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_4	phrog_20016	190.5	0	N/A	unknown function
UniRef90	UHGV-0180050_4	UniRef90_A0A285PT46	192.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0180050_4	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-0180050_4	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_6	phrog_16490	106.9	2.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-0180050_6	1408437.JNJN01000043_gene803	107.0	3.85e-25	N/A	N/A
PHROG	UHGV-0180050_7	phrog_374	204.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0180050_7	755731.Clo1100_2169	154.0	4.17587e-43	N/A	N/A
PHROG	UHGV-0180050_8	phrog_22984	81.1	4.4e-24	N/A	unknown function
PHROG	UHGV-0180050_9	phrog_21718	84.1	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0180050_9	397290.C810_05210	57.4	0.0000000462	N/A	N/A
PHROG	UHGV-0180050_10	phrog_3754	91.8	7.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0180050_10	476272.RUMHYD_01764	162.0	0	N/A	N/A
structural_annotation	UHGV-0180050_11	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_12	phrog_14030	144.1	9.09443e-43	N/A	unknown function
UniRef90	UHGV-0180050_12	UniRef90_R6LL81	246.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0180050_12	1121866.AUGK01000003_gene1444	94.4	2e-19	amidase activity	N/A
COG	UHGV-0180050_12	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0180050_13	phrog_6918	94.7	6.6e-28	holin	lysis
UniRef90	UHGV-0180050_13	UniRef90_A0A316QCY7	102.0	3.48e-26	Holin	N/A
eggNOG-mapper	UHGV-0180050_13	1297617.JPJD01000020_gene301	100.0	2.43e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0180050_13	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0180050_13	PF09682,TIGR01673	N/A	N/A	N/A	N/A
Pfam	UHGV-0180050_16	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0180050_16	PF07484	N/A	N/A	N/A	N/A
Pfam	UHGV-0180050_17	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0180050_17	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_18	phrog_18725	97.8	1.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0180050_18	1226322.HMPREF1545_00062	119.0	9.13e-32	N/A	N/A
PHROG	UHGV-0180050_19	phrog_35892	43.9	0.000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0180050_19	36875.HQ29_03185	68.9	0.000000000229	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-0180050_19	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0180050_19	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-0180050_19	PF13306	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180050_20	411471.SUBVAR_06929	306.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0180050_20	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0180050_22	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_23	phrog_13879	238.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0180050_23	693746.OBV_18210	387.0	0	N/A	N/A
structural_annotation	UHGV-0180050_23	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_24	phrog_1194	67.7	1.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0180050_24	411902.CLOBOL_00125	108.0	1.69e-28	N/A	N/A
structural_annotation	UHGV-0180050_24	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_25	phrog_1535	92.5	8.8e-39	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0180050_25	693746.OBV_18190	181.0	4.06377e-44	domain protein	N/A
COG	UHGV-0180050_25	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180050_25	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_26	phrog_806	87.9	9.7e-26	N/A	unknown function
UniRef90	UHGV-0180050_26	UniRef90_UPI00137B5163	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0180050_26	397290.C810_05150	116.0	6.56e-29	N/A	N/A
Pfam	UHGV-0180050_26	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0180050_26	PF11611,PF06832,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_27	phrog_706	109.8	2.7e-32	N/A	unknown function
UniRef90	UHGV-0180050_27	UniRef90_UPI000682A80B	203.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0180050_27	693746.OBV_18170	200.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0180050_27	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0180050_27	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_28	phrog_11299	69.4	6.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0180050_28	693746.OBV_18160	199.0	0	N/A	N/A
structural_annotation	UHGV-0180050_28	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_29	phrog_3099	84.7	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0180050_29	1235797.C816_04186	232.0	0	N/A	N/A
structural_annotation	UHGV-0180050_29	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_30	phrog_3266	48.9	0.000000000000097	tail completion	connector
eggNOG-mapper	UHGV-0180050_30	1232443.BAIA02000078_gene24	174.0	0	N/A	N/A
structural_annotation	UHGV-0180050_30	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_31	phrog_556	70.9	1.7e-20	minor head protein	head and packaging
UniRef90	UHGV-0180050_31	UniRef90_UPI00195E1497	206.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0180050_31	1226322.HMPREF1545_00054	170.0	0	Minor capsid protein	N/A
Pfam	UHGV-0180050_31	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0180050_31	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_32	phrog_3366	100.8	1.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0180050_32	1226322.HMPREF1545_00053	166.0	0	N/A	N/A
Pfam	UHGV-0180050_32	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0180050_32	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0180050_33	phrog_541	105.0	4.6e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0180050_33	642492.Clole_0822	69.3	0.000000000000371	N/A	N/A
PHROG	UHGV-0180050_34	phrog_10	68.3	1.6e-19	major head protein	head and packaging
UniRef90	UHGV-0180050_34	UniRef90_A0A2U1BEF2	266.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0180050_34	1226322.HMPREF1545_00050	233.0	0	Phage capsid family	N/A
Pfam	UHGV-0180050_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0180050_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0180050_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0180050_34	PF05065,NF041188,COG1659	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0180050	Yes	21,864	55	52	1