vOTU vOTU-171697

vOTU: vOTU-171697

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-171697
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vOTU-171697
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1430590
Biosample ID	N/A
Genome length (bp)	40,155 bps
CheckV completeness	69.03% (Medium-quality)
CDS count	62
CDS density	91.76%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	23	Host agreement	91.3
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1430590_1	phrog_20593	46.7	0.00000000000015	N/A	unknown function
PHROG	UHGV-1430590_4	phrog_19106	342.7	0	N/A	unknown function
UniRef90	UHGV-1430590_4	UniRef90_R6RVQ6	285.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_4	658655.HMPREF0988_00875	245.0	0	N/A	N/A
Pfam	UHGV-1430590_4	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-1430590_4	TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-1430590_5	K19789	97.0	3.4e-30	radD; DNA repair protein RadD	N/A
PHROG	UHGV-1430590_5	phrog_16	127.0	1e-37	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430590_5	UniRef90_A0A417CXP6	219.0	0	Helicase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_5	180332.JTGN01000007_gene3623	177.0	3.78351e-44	domain protein	N/A
PADLOC	UHGV-1430590_5	mREase_IV_00005	57.8	9.7e-17	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1430590_5	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1430590_5	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
Pfam	UHGV-1430590_5	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-1430590_5	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
PHROG	UHGV-1430590_7	phrog_9298	98.1	1e-28	radical SAM domain protein	other
UniRef90	UHGV-1430590_7	UniRef90_A0A658JBA8	98.2	3.18e-24	Radical SAM protein (Fragment)	N/A
eggNOG-mapper	UHGV-1430590_7	1235793.C809_02647	120.0	4.76e-32	N/A	N/A
COG	UHGV-1430590_7	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
PHROG	UHGV-1430590_9	phrog_28936	228.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1430590_9	573061.Clocel_3563	141.0	1.92e-39	N/A	N/A
structural_annotation	UHGV-1430590_9	PF11645,MF_01490,NF040854	N/A	N/A	N/A	N/A
KOfam	UHGV-1430590_10	K03111	95.0	1.3e-27	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1430590_10	phrog_44	113.6	2.1e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430590_10	UniRef90_A0A6L5Y0Z9	125.0	2.02e-34	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1430590_10	592026.GCWU0000282_000981	119.0	1.39e-32	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1430590_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1430590_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1430590_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1430590_10	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_11	phrog_16527	114.7	5.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-1430590_12	397288.C806_00101	52.8	0.0000000169	N/A	N/A
KOfam	UHGV-1430590_13	K06167	46.9	1.5e-20	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1430590_13	phrog_392	164.8	0	metal-dependent hydrolase	other
UniRef90	UHGV-1430590_13	UniRef90_R9KL69	235.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_13	397290.C810_01486	235.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1430590_13	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1430590_13	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1430590_13	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_14	phrog_757	60.8	1.3e-17	DNA methyltransferase	other
eggNOG-mapper	UHGV-1430590_14	658655.HMPREF0988_00884	329.0	0	N/A	N/A
AcrCatalog	UHGV-1430590_14	cluster_47493	189.0	0	NA	N/A
structural_annotation	UHGV-1430590_14	PF00145,MF_00341,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1430590_15	K07455	181.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1430590_15	phrog_148	205.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430590_15	UniRef90_A0A7G5N1F5	411.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1430590_15	1298920.KI911353_gene2727	300.0	0	RecT family	N/A
Pfam	UHGV-1430590_15	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1430590_15	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1430590_15	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1430590_15	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430590_16	TIGR02582,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_17	phrog_15946	76.0	5.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1430590_17	1041147.AUFB01000014_gene330	70.1	0.000000000000402	N/A	N/A
KOfam	UHGV-1430590_18	K19171	83.1	2.6e-24	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1430590_18	phrog_77	250.4	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430590_18	UniRef90_A0A1Q6KA53	494.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_18	1294142.CINTURNW_1008	323.0	0	nuclear chromosome segregation	N/A
PADLOC	UHGV-1430590_18	PbeC_00033	45.5	0.0000000000001	PbeC	PBE
Pfam	UHGV-1430590_18	PF13175	N/A	N/A	AAA ATPase domain	AAA_15
COG	UHGV-1430590_18	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1430590_18	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_20	phrog_26861	89.0	2.4e-26	N/A	unknown function
UniRef90	UHGV-1430590_20	UniRef90_R6Y8K9	169.0	0	Single-strand binding protein/Primosomal replication protein n	N/A
eggNOG-mapper	UHGV-1430590_20	1280689.AUJC01000005_gene521	163.0	0	PFAM single-strand binding protein	N/A
Pfam	UHGV-1430590_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1430590_20	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1430590_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1430590_20	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_22	phrog_32437	75.7	6.2e-22	N/A	unknown function
UniRef90	UHGV-1430590_22	UniRef90_A0A350VVB0	139.0	2.02e-37	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_22	411470.RUMGNA_00204	59.3	0.0000000631	Transglycosylase SLT domain protein	N/A
Pfam	UHGV-1430590_22	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
KOfam	UHGV-1430590_23	K07741	46.0	0.0000000000017	antB; anti-repressor protein	N/A
PHROG	UHGV-1430590_23	phrog_5817	52.8	0.00000000000001	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1430590_23	UniRef90_UPI001A9A46FC	103.0	4.9e-27	antA/AntB antirepressor family protein	N/A
eggNOG-mapper	UHGV-1430590_23	552396.HMPREF0863_00756	147.0	7.94536e-43	P22_AR N-terminal domain	N/A
Pfam	UHGV-1430590_23	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1430590_23	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
UniRef90	UHGV-1430590_24	UniRef90_UPI00156E2D91	88.2	5.92e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_24	655812.HMPREF0061_0222	63.9	0.00000000000441	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1430590_24	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1430590_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1430590_25	K22300	45.1	0.000000000002	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1430590_25	phrog_8	68.9	1.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1430590_25	UniRef90_UPI001570EBDA	73.9	0.0000000000000125	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1430590_25	420890.LCGL_0312	62.4	0.0000000000548	Lactococcus bacteriophage repressor	N/A
Pfam	UHGV-1430590_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1430590_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1430590_25	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430590_26	1336241.JAEB01000004_gene513	120.0	1.51e-31	N/A	N/A
structural_annotation	UHGV-1430590_26	PF07233,NF038353,COG5633	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430590_28	UniRef90_R6JNH0	85.9	3.15e-16	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_28	883109.HMPREF0380_00270	107.0	7.4e-24	pathogenesis	N/A
Pfam	UHGV-1430590_28	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1430590_28	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-1430590_28	PF00877,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_30	phrog_6616	124.6	6.8e-37	tail protein	tail
eggNOG-mapper	UHGV-1430590_30	86416.Clopa_0591	156.0	4.86e-36	Phage minor structural protein	N/A
COG	UHGV-1430590_30	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1430590_31	phrog_1401	48.2	0.00000000000018	N/A	unknown function
eggNOG-mapper	UHGV-1430590_31	272562.CA_C1175	60.1	0.000000000736	N/A	N/A
structural_annotation	UHGV-1430590_31	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_32	phrog_1194	70.9	1.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-1430590_32	1232453.BAIF02000058_gene1638	68.2	0.000000000000469	N/A	N/A
structural_annotation	UHGV-1430590_32	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_33	phrog_28918	143.4	1.3999e-42	N/A	unknown function
eggNOG-mapper	UHGV-1430590_33	1298920.KI911353_gene2649	272.0	0	tape measure	N/A
COG	UHGV-1430590_33	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1430590_35	phrog_36112	111.8	1.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-1430590_35	476272.RUMHYD_01969	117.0	2.49e-31	N/A	N/A
structural_annotation	UHGV-1430590_35	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430590_36	476272.RUMHYD_01968	189.0	0	N/A	N/A
structural_annotation	UHGV-1430590_36	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430590_37	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430590_38	1298920.KI911353_gene2654	149.0	1.65353e-43	N/A	N/A
AcrCatalog	UHGV-1430590_38	cluster_24841	114.0	5.8e-34	NA	N/A
PHROG	UHGV-1430590_39	phrog_774	71.6	1.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-1430590_39	397290.C810_05225	149.0	0	N/A	N/A
PHROG	UHGV-1430590_40	phrog_1233	75.5	8.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-1430590_40	1151292.QEW_4538	81.6	1.1e-18	N/A	N/A
eggNOG-mapper	UHGV-1430590_41	1298920.KI911353_gene2656	65.5	0.0000000000152	N/A	N/A
structural_annotation	UHGV-1430590_41	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_42	phrog_881	80.4	1.3e-23	holin	lysis
UniRef90	UHGV-1430590_42	UniRef90_UPI001D0692FC	114.0	8.85e-32	phage holin	N/A
eggNOG-mapper	UHGV-1430590_42	742740.HMPREF9474_02251	118.0	2.86e-34	Putative phage holin Dp-1	N/A
Pfam	UHGV-1430590_42	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1430590_42	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_43	phrog_1863	55.3	6e-16	N/A	unknown function
eggNOG-mapper	UHGV-1430590_43	411468.CLOSCI_01509	73.6	0.00000000000000124	N/A	N/A
eggNOG-mapper	UHGV-1430590_44	397290.C810_01402	72.4	0.00000000000000656	N/A	N/A
PHROG	UHGV-1430590_45	phrog_3673	71.2	5.6e-21	Arc-like repressor	transcription regulation
UniRef90	UHGV-1430590_45	UniRef90_UPI001E602BF5	69.3	0.000000000000473	Rho termination factor N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_45	1197953.I6T7M8_9CAUD	62.8	0.0000000000286	DNA-dependent transcription, termination	N/A
structural_annotation	UHGV-1430590_45	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_46	phrog_544	200.2	0	major head protein	head and packaging
UniRef90	UHGV-1430590_46	UniRef90_A0A810PZM2	424.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_46	1347392.CCEZ01000005_gene1236	289.0	0	N/A	N/A
structural_annotation	UHGV-1430590_46	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_48	phrog_64	136.9	1.10001e-40	portal protein	head and packaging
UniRef90	UHGV-1430590_48	UniRef90_A0A8D9PG58	469.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1430590_48	397290.C810_01397	429.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1430590_48	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1430590_48	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430590_49	PF10122,NF041070,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_50	phrog_36	54.5	0.0000000000000026	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1430590_50	397290.C810_01391	226.0	0	N/A	N/A
structural_annotation	UHGV-1430590_50	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_51	phrog_38	151.7	4.2039e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1430590_51	UniRef90_A0A8D9UIV2	808.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1430590_51	397290.C810_01390	629.0	0	chromosome segregation	N/A
Pfam	UHGV-1430590_51	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1430590_51	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430590_51	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_56	phrog_6721	146.9	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-1430590_56	748727.CLJU_c30720	218.0	0	N/A	N/A
structural_annotation	UHGV-1430590_56	MF_01408,TIGR02170	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430590_57	PF04606,NF007241	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_58	phrog_270	44.3	0.0000000000026	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430590_58	UniRef90_UPI001F045849	79.3	0.0000000000000739	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_58	397290.C810_01368	121.0	2.07e-29	N/A	N/A
structural_annotation	UHGV-1430590_58	PF13730,MF_01819,TIGR04176,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-1430590_59	phrog_1485	105.0	8.4e-31	N/A	unknown function
UniRef90	UHGV-1430590_59	UniRef90_F1TED9	107.0	2.78e-28	N/A	N/A
eggNOG-mapper	UHGV-1430590_59	588581.Cpap_1497	107.0	4.66e-29	N/A	N/A
Pfam	UHGV-1430590_59	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
PHROG	UHGV-1430590_60	phrog_229	84.0	2.1e-24	MazG-like pyrophosphatase	other
UniRef90	UHGV-1430590_60	UniRef90_UPI00156E6FB9	148.0	2.66247e-44	nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-1430590_60	411473.RUMCAL_00277	96.7	1.76e-24	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1430590_60	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1430590_60	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1430590_60	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430590_61	658655.HMPREF0988_00895	125.0	7.37e-34	N/A	N/A
KOfam	UHGV-1430590_62	K07727	41.6	0.00000000003	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1430590_62	UniRef90_F7K072	89.7	4.91e-22	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1430590_62	411470.RUMGNA_00075	89.7	8.24e-23	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1430590_62	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1430590_62	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1430590	Yes	40,155	37	69	1