Metagenome Family F049927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049927
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	46 residues
Representative Sequence	AAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT
Number of Associated Samples	111
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.32 %
% of genes from short scaffolds (< 2000 bps)	87.67 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.959 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (34.247 % of family members)
Environment Ontology (ENVO)	Unclassified (72.603 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (80.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.67% β-sheet: 0.00% Coil/Unstructured: 85.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00528	BPD_transp_1	20.55
PF00561	Abhydrolase_1	12.33
PF02653	BPD_transp_2	11.64
PF00085	Thioredoxin	7.53
PF13599	Pentapeptide_4	6.16
PF00860	Xan_ur_permease	2.74
PF00459	Inositol_P	2.74
PF13302	Acetyltransf_3	2.05
PF12146	Hydrolase_4	2.05
PF00296	Bac_luciferase	2.05
PF07690	MFS_1	2.05
PF01177	Asp_Glu_race	1.37
PF00271	Helicase_C	1.37
PF04828	GFA	1.37
PF08386	Abhydrolase_4	1.37
PF12697	Abhydrolase_6	1.37
PF13489	Methyltransf_23	0.68
PF00571	CBS	0.68
PF00892	EamA	0.68
PF00270	DEAD	0.68
PF05050	Methyltransf_21	0.68
PF16327	CcmF_C	0.68
PF00111	Fer2	0.68
PF00005	ABC_tran	0.68
PF00355	Rieske	0.68
PF03092	BT1	0.68
PF13673	Acetyltransf_10	0.68
PF14748	P5CR_dimer	0.68
PF13469	Sulfotransfer_3	0.68
PF00291	PALP	0.68
PF00202	Aminotran_3	0.68
PF03591	AzlC	0.68
PF05437	AzlD	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.05
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.37
COG1296	Predicted branched-chain amino acid permease (azaleucine resistance)	Amino acid transport and metabolism [E]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
All Organisms	root	All Organisms	39.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
cellular organisms	root	All Organisms → cellular organisms	39.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	26.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	26.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	23.97 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	8.22 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	2.05 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.96 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	8.22 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	2.05 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	1.37 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573026\|GS311G0146KB_1112079609387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	843	Open in IMG/M
3300000181\|LPjun08P4500mDRAFT_c1004322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2429	Open in IMG/M
3300000219\|LPfeb10P161000mDRAFT_c1006328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2597	Open in IMG/M
3300000222\|LPjun09P12500mDRAFT_1041628	Not Available	786	Open in IMG/M
3300000251\|LPjun08P16500mDRAFT_1009684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1287	Open in IMG/M
3300000260\|LP_A_09_P20_500DRAFT_1004570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2574	Open in IMG/M
3300000261\|LP_A_09_P20_1000DRAFT_1004276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2264	Open in IMG/M
3300001125\|JGI11931J13222_1016500	Not Available	539	Open in IMG/M
3300001676\|TuiMalila_1016250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1904	Open in IMG/M
3300001683\|GBIDBA_10031474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2241	Open in IMG/M
3300001971\|GOS2215_10091856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1891	Open in IMG/M
3300001974\|GOS2246_10062641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2010	Open in IMG/M
3300001974\|GOS2246_10164817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1631	Open in IMG/M
3300002913\|JGI26060J43896_10059584	Not Available	1055	Open in IMG/M
3300005401\|Ga0066857_10121890	Not Available	931	Open in IMG/M
3300005404\|Ga0066856_10306522	Not Available	684	Open in IMG/M
3300005423\|Ga0066828_10106613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	967	Open in IMG/M
3300005424\|Ga0066826_10048059	Not Available	1640	Open in IMG/M
3300005424\|Ga0066826_10203980	Not Available	683	Open in IMG/M
3300005425\|Ga0066859_10259054	Not Available	507	Open in IMG/M
3300005427\|Ga0066851_10172432	Not Available	685	Open in IMG/M
3300005428\|Ga0066863_10294866	Not Available	563	Open in IMG/M
3300005430\|Ga0066849_10149233	Not Available	921	Open in IMG/M
3300005430\|Ga0066849_10182076	Not Available	821	Open in IMG/M
3300005430\|Ga0066849_10184374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300005509\|Ga0066827_10192767	Not Available	714	Open in IMG/M
3300005603\|Ga0066853_10226470	Not Available	619	Open in IMG/M
3300005604\|Ga0066852_10150457	Not Available	814	Open in IMG/M
3300005605\|Ga0066850_10100473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300005945\|Ga0066381_10014083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2127	Open in IMG/M
3300005945\|Ga0066381_10257358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	503	Open in IMG/M
3300005948\|Ga0066380_10231362	Not Available	563	Open in IMG/M
3300005951\|Ga0066379_10225436	Not Available	606	Open in IMG/M
3300006093\|Ga0082019_1023956	Not Available	1157	Open in IMG/M
3300006166\|Ga0066836_10308556	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300006166\|Ga0066836_10916638	Not Available	529	Open in IMG/M
3300006313\|Ga0068472_10340062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1306	Open in IMG/M
3300006313\|Ga0068472_10426622	Not Available	528	Open in IMG/M
3300006313\|Ga0068472_10524954	Not Available	1422	Open in IMG/M
3300006331\|Ga0068488_1449167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	847	Open in IMG/M
3300006339\|Ga0068481_1133759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3269	Open in IMG/M
3300006341\|Ga0068493_10511186	Not Available	631	Open in IMG/M
3300006341\|Ga0068493_10695422	Not Available	545	Open in IMG/M
3300006902\|Ga0066372_10120546	Not Available	1375	Open in IMG/M
3300006902\|Ga0066372_10587048	Not Available	662	Open in IMG/M
3300006902\|Ga0066372_10705857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	606	Open in IMG/M
3300006902\|Ga0066372_11001501	Not Available	509	Open in IMG/M
3300007283\|Ga0066366_10318175	Not Available	663	Open in IMG/M
3300007283\|Ga0066366_10364418	Not Available	623	Open in IMG/M
3300007291\|Ga0066367_1163363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	844	Open in IMG/M
3300007291\|Ga0066367_1276634	Not Available	656	Open in IMG/M
3300007508\|Ga0105011_1084372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1284	Open in IMG/M
3300007512\|Ga0105016_1058784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2617	Open in IMG/M
3300007514\|Ga0105020_1254389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300007515\|Ga0105021_1128743	Not Available	1510	Open in IMG/M
3300007760\|Ga0105018_1116333	Not Available	931	Open in IMG/M
3300008223\|Ga0105348_1139612	Not Available	689	Open in IMG/M
3300008251\|Ga0105359_10323607	Not Available	739	Open in IMG/M
3300008253\|Ga0105349_10194231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300008253\|Ga0105349_10359098	Not Available	606	Open in IMG/M
3300008254\|Ga0105351_1140537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	802	Open in IMG/M
3300008625\|Ga0115653_1089643	Not Available	1587	Open in IMG/M
3300008735\|Ga0115657_1022358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5545	Open in IMG/M
3300008735\|Ga0115657_1258837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300008736\|Ga0115659_141181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300009104\|Ga0117902_1102891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3129	Open in IMG/M
3300009104\|Ga0117902_1208894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1920	Open in IMG/M
3300009104\|Ga0117902_1254331	Not Available	1672	Open in IMG/M
3300009108\|Ga0117920_1030994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2726	Open in IMG/M
3300009108\|Ga0117920_1148598	Not Available	865	Open in IMG/M
3300009110\|Ga0117925_1033096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2319	Open in IMG/M
3300009110\|Ga0117925_1047239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1818	Open in IMG/M
3300009130\|Ga0118729_1191767	Not Available	856	Open in IMG/M
3300009132\|Ga0118730_1128036	Not Available	1616	Open in IMG/M
3300009173\|Ga0114996_10298686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1261	Open in IMG/M
3300009339\|Ga0117928_1064974	Not Available	1575	Open in IMG/M
3300009409\|Ga0114993_10301705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300009409\|Ga0114993_10804072	Not Available	678	Open in IMG/M
3300009481\|Ga0114932_10381883	Not Available	837	Open in IMG/M
3300009593\|Ga0115011_11075926	Not Available	685	Open in IMG/M
3300009593\|Ga0115011_11213823	Not Available	651	Open in IMG/M
3300009703\|Ga0114933_10494165	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300009703\|Ga0114933_10932470	Not Available	551	Open in IMG/M
3300009786\|Ga0114999_10896982	Not Available	648	Open in IMG/M
3300012950\|Ga0163108_10289846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1053	Open in IMG/M
3300012950\|Ga0163108_10592322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	717	Open in IMG/M
3300012950\|Ga0163108_11035713	Not Available	530	Open in IMG/M
3300012950\|Ga0163108_11141046	Not Available	502	Open in IMG/M
3300020256\|Ga0211645_1022180	Not Available	1078	Open in IMG/M
3300020262\|Ga0211537_1021713	Not Available	1362	Open in IMG/M
3300020295\|Ga0211530_1075564	Not Available	530	Open in IMG/M
3300020326\|Ga0211561_1002010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	7272	Open in IMG/M
3300020333\|Ga0211661_1013419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2611	Open in IMG/M
3300020364\|Ga0211538_1093318	Not Available	897	Open in IMG/M
3300020373\|Ga0211660_10157926	Not Available	809	Open in IMG/M
3300020373\|Ga0211660_10248432	Not Available	600	Open in IMG/M
3300020383\|Ga0211646_10248068	Not Available	632	Open in IMG/M
3300020399\|Ga0211623_10029257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1871	Open in IMG/M
3300020434\|Ga0211670_10331354	Not Available	634	Open in IMG/M
3300020457\|Ga0211643_10585802	Not Available	547	Open in IMG/M
3300020462\|Ga0211546_10187688	Not Available	1025	Open in IMG/M
3300020476\|Ga0211715_10436850	Not Available	643	Open in IMG/M
3300020477\|Ga0211585_10334304	Not Available	898	Open in IMG/M
3300020477\|Ga0211585_10400720	Not Available	795	Open in IMG/M
3300021084\|Ga0206678_10412079	Not Available	634	Open in IMG/M
3300021087\|Ga0206683_10365133	Not Available	727	Open in IMG/M
3300021089\|Ga0206679_10595728	Not Available	566	Open in IMG/M
3300022225\|Ga0187833_10457115	Not Available	665	Open in IMG/M
3300025215\|Ga0207920_1037109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	779	Open in IMG/M
3300025219\|Ga0208470_1025942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	922	Open in IMG/M
3300025221\|Ga0208336_1002325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5508	Open in IMG/M
3300025776\|Ga0208699_1022475	Not Available	807	Open in IMG/M
3300025863\|Ga0208833_1025645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1089	Open in IMG/M
3300026073\|Ga0207961_1053341	Not Available	890	Open in IMG/M
3300026192\|Ga0207986_1078237	Not Available	744	Open in IMG/M
3300026257\|Ga0208407_1066180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1183	Open in IMG/M
3300026264\|Ga0207991_1004313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	6923	Open in IMG/M
3300026292\|Ga0208277_1173271	Not Available	706	Open in IMG/M
3300026321\|Ga0208764_10331152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300027827\|Ga0209035_10345799	Not Available	734	Open in IMG/M
3300027827\|Ga0209035_10347883	Not Available	731	Open in IMG/M
3300027839\|Ga0209403_10114514	Not Available	1750	Open in IMG/M
3300027906\|Ga0209404_10969927	Not Available	582	Open in IMG/M
3300028192\|Ga0257107_1069921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1067	Open in IMG/M
3300028489\|Ga0257112_10322510	Not Available	514	Open in IMG/M
3300031605\|Ga0302132_10153274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300031701\|Ga0302120_10239734	Not Available	679	Open in IMG/M
3300031757\|Ga0315328_10432910	Not Available	762	Open in IMG/M
3300031861\|Ga0315319_10060898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1782	Open in IMG/M
3300031886\|Ga0315318_10279784	Not Available	956	Open in IMG/M
3300032006\|Ga0310344_10101203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2394	Open in IMG/M
3300032011\|Ga0315316_11096322	Not Available	644	Open in IMG/M
3300032032\|Ga0315327_10209282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1223	Open in IMG/M
3300032032\|Ga0315327_10584470	Not Available	690	Open in IMG/M
3300032088\|Ga0315321_10540380	Not Available	700	Open in IMG/M
3300032130\|Ga0315333_10260239	Not Available	822	Open in IMG/M
3300032132\|Ga0315336_1151193	Not Available	914	Open in IMG/M
3300032278\|Ga0310345_10759699	Not Available	941	Open in IMG/M
3300032278\|Ga0310345_11777323	Not Available	601	Open in IMG/M
3300032360\|Ga0315334_10259592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1432	Open in IMG/M
3300032820\|Ga0310342_100359452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1569	Open in IMG/M
3300032820\|Ga0310342_100360395	Not Available	1567	Open in IMG/M
3300032820\|Ga0310342_100936818	Not Available	1012	Open in IMG/M
3300032820\|Ga0310342_101271838	Not Available	871	Open in IMG/M
3300032820\|Ga0310342_101889417	Not Available	713	Open in IMG/M
3300034695\|Ga0372840_069520	Not Available	1041	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	58.22%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.38%
Coastal	Environmental → Aquatic → Marine → Coastal	13.01%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.96%
Volcanic	Environmental → Aquatic → Marine → Volcanic	2.05%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	46.58%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.38%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.01%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	10.96%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	6.85%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.79%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	2.05%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.68%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.68%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	34.25%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	13.01%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	8.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	6.85%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	4.11%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	3.42%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	2.74%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.05%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.05%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.37%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.37%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine	0.68%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.68%
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573026	Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-FOS-0p8-Deep1200	Environmental	Open in IMG/M
3300000181	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P4 500m	Environmental	Open in IMG/M
3300000219	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2010 P16 1000m	Environmental	Open in IMG/M
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental	Open in IMG/M
3300000251	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 500m	Environmental	Open in IMG/M
3300000260	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500	Environmental	Open in IMG/M
3300000261	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_1000	Environmental	Open in IMG/M
3300001125	Marine microbial communities from the Deep Atlantic Ocean - MP0204	Environmental	Open in IMG/M
3300001676	Black smokers hydrothermal plume microbial communities from Tui Malila, Lau Basin, Pacific Ocean	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300001971	Marine microbial communities from the Sargasso Sea - GS000c	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300002913	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300005401	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005428	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005945	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300007508	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007512	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007515	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300007760	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300008223	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN8C Hudson Canyon	Environmental	Open in IMG/M
3300008251	Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM8C Gulf of Mexico	Environmental	Open in IMG/M
3300008253	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon	Environmental	Open in IMG/M
3300008254	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN4B Hudson Canyon	Environmental	Open in IMG/M
3300008625	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um	Environmental	Open in IMG/M
3300008735	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um	Environmental	Open in IMG/M
3300008736	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009110	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009130	Combined Assembly of Gp0139511, Gp0139512	Environmental	Open in IMG/M
3300009132	Combined Assembly of Gp0139359, Gp0139510	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009339	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 103m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300020256	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556010-ERR599067)	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020295	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX555980-ERR599109)	Environmental	Open in IMG/M
3300020326	Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX556099-ERR599004)	Environmental	Open in IMG/M
3300020333	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX556081-ERR598953)	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental	Open in IMG/M
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental	Open in IMG/M
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020476	Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)	Environmental	Open in IMG/M
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025215	Marine microbial communities from the Deep Atlantic Ocean - MP0204 (SPAdes)	Environmental	Open in IMG/M
3300025219	Marine microbial communities from the Deep Atlantic Ocean - MP0740 (SPAdes)	Environmental	Open in IMG/M
3300025221	Marine microbial communities from the Deep Atlantic Ocean - MP0372 (SPAdes)	Environmental	Open in IMG/M
3300025776	Marine microbial communities from the Deep Pacific Ocean - MP2097 (SPAdes)	Environmental	Open in IMG/M
3300025863	Marine microbial communities from the Deep Pacific Ocean - MP1788 (SPAdes)	Environmental	Open in IMG/M
3300026073	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300026264	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275 (SPAdes)	Environmental	Open in IMG/M
3300026292	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027839	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031701	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS311G0146KB_00522140	2189573026	Marine Estuarine	KIVKIAVPTTAKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT
LPjun08P4500mDRAFT_10043224	3300000181	Marine	KAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
LPfeb10P161000mDRAFT_10063281	3300000219	Marine	KAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
LPjun09P12500mDRAFT_10416281	3300000222	Marine	TAKAVGNVDKDFIEPICDPTIPLKKTVIILAVNPKT*
LPjun08P16500mDRAFT_10096843	3300000251	Marine	LRPILPIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
LP_A_09_P20_500DRAFT_10045701	3300000260	Marine	ILPIIFAAKIVKIAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
LP_A_09_P20_1000DRAFT_10042761	3300000261	Marine	PNLRPILLIILAAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
JGI11931J13222_10165001	3300001125	Deep Ocean	ILLIILAAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
TuiMalila_10162501	3300001676	Black Smokers Hydrothermal Plume	PTTDKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT*
GBIDBA_100314746	3300001683	Hydrothermal Vent Plume	FAAKIVKIAVPTTAKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT*
GOS2215_100918561	3300001971	Marine	TIVKIAVPRTAKAVGNVDKDFMEVICDPTIPLKKTVIILAVNPKT*
GOS2246_100626413	3300001974	Marine	QIAVPTTDKATGKVDKDFIEVICDPIIAPKKTVIVAAVNPKT*
GOS2246_101648172	3300001974	Marine	KDVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
JGI26060J43896_100595843	3300002913	Marine	AKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0066857_101218901	3300005401	Marine	LIILAAKIVKIAVPTTYKAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0066856_103065221	3300005404	Marine	PILPIIFAAKIVKIAVPRTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066828_101066131	3300005423	Marine	PILLIIFAAKIVQIAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0066826_100480592	3300005424	Marine	ILLIILAAKIVKIAVPTTYKAVGNVDKCFTEVICDPIIPLKKTVTVAAVNPKT*
Ga0066826_102039802	3300005424	Marine	RPILPIIFAAKIVKIAVPTTAKAVGNVDKEFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066859_102590541	3300005425	Marine	IIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066851_101724321	3300005427	Marine	PNLRPILPIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066863_102948662	3300005428	Marine	KIVKIAVPTTYKAVGNVDKDFIEVVCDPIIPLKKTVIVAAVNPKT*
Ga0066849_101492331	3300005430	Marine	ILFIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILTVNPKT*
Ga0066849_101820762	3300005430	Marine	PIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066849_101843742	3300005430	Marine	LRPILLIILAAKIVKIAVPTTYKAVGNVAKNFIEVICDPIIPLKKTVMVAAVNPKT*
Ga0066827_101927671	3300005509	Marine	IIFAAKIVKIAVPTTAKAVGNVDKEFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066853_102264701	3300005603	Marine	KAVGNVAKDFIDAICDPIIPLKKTVIVAAVNPKT*
Ga0066852_101504572	3300005604	Marine	NLRPILLIILAAKIVKIAVPTTYKAVGNVDKCFTEVICDPIIPLKKTVTVAAVNPKT*
Ga0066850_101004731	3300005605	Marine	IAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0066381_100140831	3300005945	Marine	PTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066381_102573581	3300005945	Marine	VKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVKPNT*
Ga0066380_102313622	3300005948	Marine	IAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVKPNT*
Ga0066379_102254361	3300005951	Marine	ILLIILAAKIVKIAVPTTYKAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0082019_10239561	3300006093	Marine	KPNLRPILLIILAAKIVKIAVPTTYKAVGNVDKCFIEVICDPIIPLKKTVTVAAVNPKT*
Ga0066836_103085561	3300006166	Marine	PILLIILAAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0066836_109166381	3300006166	Marine	IFAAKIVQIAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVTVAAVNPNT*
Ga0068472_103400621	3300006313	Marine	AAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT*
Ga0068472_104266221	3300006313	Marine	PKIKPNLRPILPIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0068472_105249541	3300006313	Marine	ILAAKIVKIAVPTTYKAVGNVAKNFIEAICEPIIPLKKTVIILAVNPKT*
Ga0068488_14491671	3300006331	Marine	VKIAVPTTAKAVGNVDKDFIEVISDPTIPLKNTVIILAVNPKT*
Ga0068481_11337594	3300006339	Marine	ARIVNIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVKPNT*
Ga0068493_105111863	3300006341	Marine	LAVDKIAVPTTAKAVGNVDKDFIEVICEPTIPLKKTVIILAVNPKT*
Ga0068493_106954221	3300006341	Marine	KINPNLRPILPIIFAAKIVKIAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066372_101205462	3300006902	Marine	AMIVKIAVPTTYKAVGNVAKDFIEAICDPIIPLKKTVIVAAVNPKT*
Ga0066372_105870481	3300006902	Marine	KIAVPTTDKAVGNVDRDFIEVICDPTIPLKKTVIILTVYPKT*
Ga0066372_107058572	3300006902	Marine	VPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066372_110015011	3300006902	Marine	IAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAV*
Ga0066366_103181752	3300007283	Marine	AVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0066366_103644182	3300007283	Marine	PTTYIAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0066367_11633631	3300007291	Marine	VPTTAKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT*
Ga0066367_12766341	3300007291	Marine	AKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0105011_10843721	3300007508	Marine	LFIILAAKIVKIAVPTTYIAVGNVAKNFIEVISDPIIPLKKTVIVAAVNPKT*
Ga0105016_10587841	3300007512	Marine	KATGKVDKDFIEVICDPIIAPKKTVIVAAVNPKT*
Ga0105020_12543891	3300007514	Marine	RTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0105021_11287432	3300007515	Marine	LIILAAKIVKIAVPTTYKAVGNVDKDFIEVISDPIIPLKKTVIVAAVNPKT*
Ga0105018_11163332	3300007760	Marine	DKAVGNVDKDFMEVICDPTIPLKKTVIILAVNPKT*
Ga0105348_11396122	3300008223	Methane Seep Mesocosm	PTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVKPNT*
Ga0105359_103236071	3300008251	Methane Seep Mesocosm	KAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT*
Ga0105349_101942312	3300008253	Methane Seep Mesocosm	KAVGNVDKDFIEVICDPIIPLKKTVIILAVYAKT*
Ga0105349_103590981	3300008253	Methane Seep Mesocosm	LRPILPIIFAAKIVKIAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKI*
Ga0105351_11405373	3300008254	Methane Seep Mesocosm	KIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0115653_10896432	3300008625	Marine	LAAKIVKIAVPTTYIAVGNVDKNFIEVICDPIIPLKKTVMVAAVNPKT*
Ga0115657_10223581	3300008735	Marine	PMIFAAIIVKIAVPRTDNAVGNVDKDFIEVSCDPTIPLKKTVIILAVNPKI*
Ga0115657_12588371	3300008735	Marine	TTEKATGKVDKDFIEVICDPIIAPKKTVIVAAVNPKT*
Ga0115659_1411812	3300008736	Marine	VKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0117902_11028911	3300009104	Marine	IFAAKIVKIAVPRTDKDVGNVDKDFIGAICDPTIPLKKTVIILAVNPKT*
Ga0117902_12088943	3300009104	Marine	PRTDSEVGNVDKDFIGAISDPTIPLKKTVIMLAVNPKT*
Ga0117902_12543311	3300009104	Marine	NLRPILPIIFAAKIVKIAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0117920_10309941	3300009108	Marine	TYIAVGNVDKNFIEVICDPIIPLKKTVMVAAVNPKT*
Ga0117920_11485982	3300009108	Marine	VKIAVPRTDKDVGNVDKDFIGAICDPTIPLKKTVIILAVNPKT*
Ga0117925_10330961	3300009110	Marine	VPTTDKAVGNVDRDFIEVICDPTIPLKKTVIILTVYPKT*
Ga0117925_10472393	3300009110	Marine	IAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPNT*
Ga0118729_11917671	3300009130	Marine	IIFAAKIVKIAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0118730_11280361	3300009132	Marine	AVPTTYMAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0114996_102986863	3300009173	Marine	AAKIVKIAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT*
Ga0117928_10649742	3300009339	Marine	PSLRPILLIILAAKIVKIAVPTTYIAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0114993_103017051	3300009409	Marine	NLRPILLIILAAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0114993_108040721	3300009409	Marine	IVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0114932_103818832	3300009481	Deep Subsurface	AAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0115011_110759262	3300009593	Marine	KIAVPTTYIAVGNVAKNFIEVICDPIIPLKKTVIVAAVNPKT*
Ga0115011_112138231	3300009593	Marine	RTAKAVGNVDKDFIELICDPTIPLKKTVIILAVNPKT*
Ga0114933_104941651	3300009703	Deep Subsurface	IFAAKKVKIAVPTTDKATGNVDKDFIEVICDPIIPPKKTVIAAFVNPKT*
Ga0114933_109324702	3300009703	Deep Subsurface	LRPILPIIFAAKIVKIAVPRTDKAVGNVDKDFMEVICDPTIPLKKTVIILAVNPNT*
Ga0114999_108969821	3300009786	Marine	MIFAAKKVKIAVPTTDKATGNVDKDFIEVICDPIIPPKKTVIAAFVNPKT
Ga0163108_102898461	3300012950	Seawater	PIIFAAKIVKIAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0163108_105923221	3300012950	Seawater	IIFAARVVKTAVPTTVNAVGNVASDFIEAICDPIIPLKNIVIVAAVKPKI*
Ga0163108_110357131	3300012950	Seawater	KIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
Ga0163108_111410461	3300012950	Seawater	PILLIILAAMIVKIAVPTTYKAVGNVAKDFIEAICDPIIPLKKTVIVAAVNPKT*
Ga0211645_10221802	3300020256	Marine	KIVKIAVPTTYKAVGNVAKDFIDAICDPIIPLKKTVIVAAVNPKT
Ga0211537_10217131	3300020262	Marine	LAAKIVKIAVPTTYKAVGNVDKCFIEVICDPIIPLKKTVTVAAVNPKT
Ga0211530_10755641	3300020295	Marine	LIIRAAKIVKIAVPTTYKAVGNVDRIFIEVICDPIIPLKKTVTVAAVNPKT
Ga0211561_10020109	3300020326	Marine	AVPTTYKAVGNVDKDFIEVICDPIIPLRKTVIVAAVNPKT
Ga0211661_10134194	3300020333	Marine	IIFAAKIVQIAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0211538_10933181	3300020364	Marine	IILAAKIVKIAVPTTYKAVGNVAKDFIDAICDPIIPLKKTVIVAAVNPKT
Ga0211660_101579262	3300020373	Marine	VKIAVPTTYKAVGNVDKDFIEVVCDPIIPLKKTVIVAAVNPKT
Ga0211660_102484321	3300020373	Marine	VNIAVPRTDKDVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0211646_102480681	3300020383	Marine	LIILAAKIVKIAVPTTYKAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT
Ga0211623_100292571	3300020399	Marine	VPTTYKAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT
Ga0211670_103313541	3300020434	Marine	IVKIAVPTTYKAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT
Ga0211643_105858021	3300020457	Marine	IILAAKIVKIAVPTTYKAVGNVAKNFIEVICDPIIPLKKTVIVAAVNPKT
Ga0211546_101876882	3300020462	Marine	AYFTHNFCGKKVKIAVPTTDKATGNVDKDFIEVICDPIIPPKKTVIAAFVNPKT
Ga0211715_104368501	3300020476	Marine	LLIILAAKIVKIAVPTTYKAVGNVAKDFIEVISDPIIPLKNTVIVAAVNPKT
Ga0211585_103343042	3300020477	Marine	AAKIVKIAVPTTDKAVGNVDKDFIEVICDPIIALKKTVTVAFVNPKT
Ga0211585_104007202	3300020477	Marine	RTDKDVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0206678_104120792	3300021084	Seawater	KIVKIAVPTTYKAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT
Ga0206683_103651332	3300021087	Seawater	VKIAVPRTDKDVGNVDKDFIEAICDPTIPLKKTVIILAVNPKT
Ga0206679_105957281	3300021089	Seawater	YKAVGNVAKNFIEAICEPIIPLKKTVIVAAVNPKT
Ga0187833_104571152	3300022225	Seawater	ILLIILAAKIVKIAVPTTYKAVGNVDKDFIEVVCDPIIPLKKTVIVAAVNPKT
Ga0207920_10371091	3300025215	Deep Ocean	PTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0208470_10259421	3300025219	Deep Ocean	IAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0208336_10023251	3300025221	Deep Ocean	IIFAAKIVKIAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0208699_10224752	3300025776	Deep Ocean	AVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0208833_10256453	3300025863	Deep Ocean	KIAVPTTDKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0207961_10533411	3300026073	Marine	LRPILLIILAAKIVKIAVPTTYKAVGNVAKNFIEAICEPIIPLKKTVIVAAVNPKT
Ga0207986_10782372	3300026192	Marine	KIVKIAVPTTAKAVGNVDKEFIEVICDPTIPLKKTVIILAVNPKT
Ga0208407_10661803	3300026257	Marine	PILLIILAAKIVKIAVPTTYIAVGNVDKNFIEVICDPIIPLKKTVIVAAVNPKT
Ga0207991_100431312	3300026264	Marine	AKIVKIAVPTTAKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT
Ga0208277_11732712	3300026292	Marine	AAKIVKIAVPRTDKDVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0208764_103311521	3300026321	Marine	PTTDKAVGNVDKDFIEVICDPIIPLKKTVTVAAVNPNT
Ga0209035_103457992	3300027827	Marine	AAKKVKIAVPTTDKATGNVDKDFMEVICDPIIPPKKTVIVAFVNPKI
Ga0209035_103478831	3300027827	Marine	RPILLIILAAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0209403_101145142	3300027839	Marine	EAKILPREVPTTLKAIGNVAKDFVSIIDDPMIPLKKTVIGAAVKEKI
Ga0209404_109699272	3300027906	Marine	KIAVPTTYIAVGNVDKNFIEVICEPMIPLKKTVIVAAVNPKT
Ga0257107_10699211	3300028192	Marine	YKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0257112_103225101	3300028489	Marine	TTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPNI
Ga0302132_101532741	3300031605	Marine	AAKIVKIAVPTTYKAVGNVDKDFIEVICDPIIPLKKTVIVAAVNPKT
Ga0302120_102397341	3300031701	Marine	AAKIVKIAVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0315328_104329102	3300031757	Seawater	AVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0315319_100608982	3300031861	Seawater	PIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0315318_102797841	3300031886	Seawater	KIAVPTTYKAVGNVAKNFIEAICEPIIPLKKTVIVAAVNPKT
Ga0310344_101012031	3300032006	Seawater	AVPSTDKAVGNVDKDFTEVICDPTIPLKKTVIILAVKPKT
Ga0315316_110963222	3300032011	Seawater	PILLIILAAKIVKIAVPTTYIAVGNVDKNFIEVICEPIIPLKKTVIVAAVNPKT
Ga0315327_102092821	3300032032	Seawater	AVPTTDKAVGNVDKDFIEVICDPTIPLKKTVIILAVNAKT
Ga0315327_105844702	3300032032	Seawater	PNLRPIFPIIFAAKIVKIAVPRTDKDVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0315321_105403801	3300032088	Seawater	TAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0315333_102602392	3300032130	Seawater	FIIFAAKIVKIAVPKTDKDVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0315336_11511931	3300032132	Seawater	FATKIVKIAVPTTAKAVGNVDKDFKEVICDPTIPLKKTVIILAVNPKT
Ga0310345_107596992	3300032278	Seawater	IAVPTTYKAVGNVAKNFIEAICEPIIPLKKTVIVAAVNPKT
Ga0310345_117773231	3300032278	Seawater	LAAKIVKIAVPTTYKAVGNVAKDFIEAICDPIIPLKKTVIVAAVNPKT
Ga0315334_102595921	3300032360	Seawater	AKAVGNVDKDFIEVICDPIIPLKKTVIILAVNPKT
Ga0310342_1003594521	3300032820	Seawater	LPIIFAAKIVKIAVPTTDKAVGNVDKDFIDVICDPTIPLKKTVIILAVNPKT
Ga0310342_1003603951	3300032820	Seawater	AKIVKIAVPTTYKAVGNVAKNFIEAICEPIIPLKKTVIVAAVNPKT
Ga0310342_1009368182	3300032820	Seawater	ARAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0310342_1012718381	3300032820	Seawater	AKIVKIAVPRTDRAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0310342_1018894172	3300032820	Seawater	AKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT
Ga0372840_069520_3_158	3300034695	Seawater	SIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049927

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences