Metagenome / Metatranscriptome Family F065994

Basic Information
Family ID	F065994
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	44 residues
Representative Sequence	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSX
Number of Associated Samples	116
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.33 %
% of genes near scaffold ends (potentially truncated)	90.55 %
% of genes from short scaffolds (< 2000 bps)	97.64 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (87.402 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.535 % of family members)
Environment Ontology (ENVO)	Unclassified (33.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.118 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.44% β-sheet: 0.00% Coil/Unstructured: 80.56%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF04392	ABC_sub_bind	2.40
PF01135	PCMT	0.80
PF00233	PDEase_I	0.80
PF13518	HTH_28	0.80
PF01527	HTH_Tnp_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.40
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.80
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.80
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.40 %
Unclassified	root	N/A	12.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.40 %
Unclassified	root	N/A	12.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.40 %
Unclassified	root	N/A	12.60 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.47 %
Unclassified	root	N/A	12.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.69 %
Unclassified	root	N/A	12.60 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	54.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.69 %
Unclassified	root	N/A	12.60 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	39.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.69 %
Unclassified	root	N/A	12.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.45 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	39.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.69 %
Unclassified	root	N/A	12.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.45 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	1.57 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.79 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Methylosinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus	39.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.69 %
Unclassified	root	N/A	12.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5.51 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1.57 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.79 %
Bradyrhizobium genosp. SA-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Methylosinus sp. C49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	39.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.69 %
Unclassified	root	N/A	12.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5.51 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1.57 %
Rhizobium mongolense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense	0.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.79 %
Bradyrhizobium genosp. SA-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Methylosinus sp. C49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	39.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.69 %
Unclassified	root	N/A	12.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5.51 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1.57 %
Rhizobium mongolense USDA 1844	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense → Rhizobium mongolense USDA 1844	0.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.79 %
Bradyrhizobium genosp. SA-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000660\|JGI12415J11908_10344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	529	Open in IMG/M
3300000699\|JGI12536J11923_103630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	542	Open in IMG/M
3300000701\|JGI12340J11893_100397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense → Rhizobium mongolense USDA 1844	1272	Open in IMG/M
3300000725\|JGI12588J11881_103362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	691	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1058897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300001108\|JGI12647J13326_102445	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300001155\|JGI12625J13251_10168	Not Available	1046	Open in IMG/M
3300001383\|JGI20194J14741_1011810	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300001661\|JGI12053J15887_10419093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300002245\|JGIcombinedJ26739_101083140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	688	Open in IMG/M
3300003351\|JGI26346J50198_1014867	Not Available	754	Open in IMG/M
3300003569\|Ga0007420J51693_1039488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	577	Open in IMG/M
3300004082\|Ga0062384_101394619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	516	Open in IMG/M
3300004281\|Ga0066397_10076551	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300004633\|Ga0066395_10449334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	735	Open in IMG/M
3300004800\|Ga0058861_12020399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	899	Open in IMG/M
3300004801\|Ga0058860_12213357	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300005178\|Ga0066688_10220110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1209	Open in IMG/M
3300005180\|Ga0066685_10428337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	919	Open in IMG/M
3300005363\|Ga0008090_14265320	Not Available	555	Open in IMG/M
3300005454\|Ga0066687_10207973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1072	Open in IMG/M
3300005556\|Ga0066707_11017121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	505	Open in IMG/M
3300005574\|Ga0066694_10374949	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005618\|Ga0068864_101225046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	749	Open in IMG/M
3300005713\|Ga0066905_101113407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300005764\|Ga0066903_105134173	Not Available	693	Open in IMG/M
3300005764\|Ga0066903_107032038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300005947\|Ga0066794_10192218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300006086\|Ga0075019_10781393	Not Available	607	Open in IMG/M
3300006175\|Ga0070712_101811344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	534	Open in IMG/M
3300006755\|Ga0079222_10452064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300006864\|Ga0066797_1208143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300010043\|Ga0126380_11467497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300010048\|Ga0126373_11284664	Not Available	798	Open in IMG/M
3300010101\|Ga0127481_1062717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	554	Open in IMG/M
3300010152\|Ga0126318_10070760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	553	Open in IMG/M
3300010154\|Ga0127503_10722245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	534	Open in IMG/M
3300010358\|Ga0126370_11480853	Not Available	644	Open in IMG/M
3300010361\|Ga0126378_13360364	Not Available	508	Open in IMG/M
3300010854\|Ga0126360_1041804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	588	Open in IMG/M
3300010855\|Ga0126355_1131184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	529	Open in IMG/M
3300010858\|Ga0126345_1052633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	586	Open in IMG/M
3300010862\|Ga0126348_1214960	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010865\|Ga0126346_1183469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012212\|Ga0150985_116251942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	585	Open in IMG/M
3300012212\|Ga0150985_118407640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	596	Open in IMG/M
3300012469\|Ga0150984_101211110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	560	Open in IMG/M
3300012929\|Ga0137404_12018334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	538	Open in IMG/M
3300012971\|Ga0126369_11879315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	687	Open in IMG/M
3300012971\|Ga0126369_13596634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	508	Open in IMG/M
3300012984\|Ga0164309_10791908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	762	Open in IMG/M
3300012984\|Ga0164309_10791908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	762	Open in IMG/M
3300013306\|Ga0163162_11616684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	739	Open in IMG/M
3300014164\|Ga0181532_10809857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	502	Open in IMG/M
3300016294\|Ga0182041_10826669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	829	Open in IMG/M
3300016294\|Ga0182041_12166508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	519	Open in IMG/M
3300018072\|Ga0184635_10216681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	762	Open in IMG/M
3300018072\|Ga0184635_10216681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	762	Open in IMG/M
3300019161\|Ga0184602_126467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	782	Open in IMG/M
3300019165\|Ga0184589_126315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	576	Open in IMG/M
3300019185\|Ga0184587_122336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	577	Open in IMG/M
3300019187\|Ga0184584_130709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	524	Open in IMG/M
3300019242\|Ga0181502_1183086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300019284\|Ga0187797_1480157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	679	Open in IMG/M
3300019284\|Ga0187797_1772692	Not Available	542	Open in IMG/M
3300020070\|Ga0206356_10929893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	699	Open in IMG/M
3300021307\|Ga0179585_1083915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	551	Open in IMG/M
3300021374\|Ga0213881_10600334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	502	Open in IMG/M
3300021560\|Ga0126371_11075157	Not Available	944	Open in IMG/M
3300021855\|Ga0213854_1141945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300021855\|Ga0213854_1347630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1567	Open in IMG/M
3300021860\|Ga0213851_1347350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	535	Open in IMG/M
3300021861\|Ga0213853_10970485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	685	Open in IMG/M
3300022195\|Ga0222625_1213815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300023046\|Ga0233356_1017581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300023656\|Ga0247547_103774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	514	Open in IMG/M
3300025432\|Ga0208821_1067726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	608	Open in IMG/M
3300025457\|Ga0208850_1002699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4186	Open in IMG/M
3300025481\|Ga0208079_1096799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300025852\|Ga0209124_10225091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	732	Open in IMG/M
3300025901\|Ga0207688_10623744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	680	Open in IMG/M
3300025925\|Ga0207650_11143689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	663	Open in IMG/M
3300026271\|Ga0209880_1077028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	697	Open in IMG/M
3300026285\|Ga0209438_1189495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	545	Open in IMG/M
3300026481\|Ga0257155_1058144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	610	Open in IMG/M
3300026490\|Ga0257153_1082449	Not Available	644	Open in IMG/M
3300026860\|Ga0207823_111005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	624	Open in IMG/M
3300026990\|Ga0207824_1034092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300027061\|Ga0209729_1037084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	612	Open in IMG/M
3300027181\|Ga0208997_1027811	Not Available	815	Open in IMG/M
3300027680\|Ga0207826_1105535	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300027680\|Ga0207826_1167385	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300028828\|Ga0307312_11028621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300029951\|Ga0311371_11840094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	652	Open in IMG/M
3300030509\|Ga0302183_10319368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	599	Open in IMG/M
3300030738\|Ga0265462_11510002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	626	Open in IMG/M
3300030763\|Ga0265763_1009091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	898	Open in IMG/M
3300030763\|Ga0265763_1013522	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300030863\|Ga0265766_1016798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300030903\|Ga0308206_1138221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300030987\|Ga0308155_1031012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300031018\|Ga0265773_1015438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300031043\|Ga0265779_110224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	574	Open in IMG/M
3300031082\|Ga0308192_1078387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300031092\|Ga0308204_10166682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	665	Open in IMG/M
3300031123\|Ga0308195_1071082	Not Available	540	Open in IMG/M
3300031226\|Ga0307497_10662869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300031543\|Ga0318516_10438359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	751	Open in IMG/M
3300031546\|Ga0318538_10519694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300031663\|Ga0307484_113754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	571	Open in IMG/M
3300031679\|Ga0318561_10530477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	648	Open in IMG/M
3300031679\|Ga0318561_10584118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300031753\|Ga0307477_10378919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300031780\|Ga0318508_1225855	Not Available	537	Open in IMG/M
3300031781\|Ga0318547_10893433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	554	Open in IMG/M
3300031782\|Ga0318552_10301812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	814	Open in IMG/M
3300031798\|Ga0318523_10386294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	696	Open in IMG/M
3300031833\|Ga0310917_10961556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	573	Open in IMG/M
3300031866\|Ga0316049_114504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300031941\|Ga0310912_11168613	Not Available	586	Open in IMG/M
3300032001\|Ga0306922_10054721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4136	Open in IMG/M
3300032063\|Ga0318504_10197116	Not Available	939	Open in IMG/M
3300032068\|Ga0318553_10325906	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300032076\|Ga0306924_11220571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300032094\|Ga0318540_10406732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300033289\|Ga0310914_10043828	All Organisms → cellular organisms → Bacteria	3657	Open in IMG/M
3300034447\|Ga0370544_16370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.13%
Host-Associated	Host-Associated	7.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.31%
Aquatic	Environmental → Aquatic	11.81%
Plants	Host-Associated → Plants	6.30%
Human	Host-Associated → Human	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.95%
Freshwater	Environmental → Aquatic → Freshwater	9.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%
Sediment	Environmental → Aquatic → Sediment	2.36%
Peat	Environmental → Terrestrial → Peat	1.57%
Digestive System	Host-Associated → Human → Digestive System	1.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.57%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.27%
Loam	Environmental → Terrestrial → Soil → Loam	15.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.57%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.15%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.15%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.57%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.72%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	3.15%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.36%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.57%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.57%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.57%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000660	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 16	Environmental	Open in IMG/M
3300000699	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79	Environmental	Open in IMG/M
3300000701	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4	Environmental	Open in IMG/M
3300000725	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 6	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001108	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3	Environmental	Open in IMG/M
3300001155	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1	Environmental	Open in IMG/M
3300001383	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003569	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_36 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010855	Boreal forest soil eukaryotic communities from Alaska, USA - W1-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019161	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300023656	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026860	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030863	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031043	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065994

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12415J11908_103443	3300000660	Tropical Forest Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSRPD
JGI12536J11923_1036301	3300000699	Tropical Forest Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSX
JGI12340J11893_1003973	3300000701	Tropical Forest Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSRPDL*
JGI12588J11881_1033621	3300000725	Tropical Forest Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARV
AP72_2010_repI_A001DRAFT_10588971	3300000893	Forest Soil	MPVERRGQVTDVEIESTGNRRSSISRRKAAAFKRWHEPEKSRG
JGI12647J13326_1024453	3300001108	Forest Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPD
JGI12625J13251_101681	3300001155	Forest Soil	MPVERRGQVTDVGSESTGNRRSSNSRREAAAFVRWHEPDD
JGI20194J14741_10118103	3300001383	Arctic Peat Soil	MPAERRGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRPESVSDSG*
JGI12053J15887_104190931	3300001661	Forest Soil	MPVEQREQVIDAESEPTGDRMSSNSRRKAAAFVRWHEPDDARVSSPDL*AARGE
JGIcombinedJ26739_1010831401	3300002245	Forest Soil	MPAEQREQVIGVGSEPTGNRMSSNSRRKAAAFVRWHEPDDARVSSPDL*
JGI26346J50198_10148672	3300003351	Bog Forest Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAXVRWHEPDDARVSSP
Ga0007420J51693_10394882	3300003569	Avena Fatua Rhizosphere	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSP
Ga0062384_1013946192	3300004082	Bog Forest Soil	MPVERRGQVTDVGSGPTGNRMSSNSRRKAAAFVRWHEPDDARVSSPD
Ga0066397_100765513	3300004281	Tropical Forest Soil	MPAERRGQVIAVGIEPTGHRTSSISRRKAAAFKRWHEPDDARVSRPESVSGSG*
Ga0066395_104493342	3300004633	Tropical Forest Soil	MPAEQRGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRPESVSGSG
Ga0058861_120203994	3300004800	Host-Associated	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPDLC
Ga0058860_122133572	3300004801	Host-Associated	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPDL*
Ga0066688_102201102	3300005178	Soil	MPVERRGQVTDVGSEPTGNRRSSNSRWEAAAFVRWHEPDDARVSSPDL*
Ga0066685_104283372	3300005180	Soil	MPVERRGQVTDVGSEPTGNRKSSNSRREAAAFVRWHEPDDARVSSPDL*
Ga0008090_142653201	3300005363	Tropical Rainforest Soil	MPVERRGQVTDVEIESTGNRRSSISRRKAAAFKRWHEPEKSRGLRPVL
Ga0066687_102079731	3300005454	Soil	SGVMPVERRGQVTDVGSEPTGNRRSSNSRWEAAAFVRWHEPDDARVSSPDL*
Ga0066707_110171211	3300005556	Soil	MPVERRGQVTDVGSEPTGNSSNSRREAAAFVRWHEPDDARVSSPDL*
Ga0066694_103749491	3300005574	Soil	MPVERRGQVTDVGSEPTGNRRSSNSQRKAAAFVRWHEPD
Ga0068864_1012250462	3300005618	Switchgrass Rhizosphere	VERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPDL
Ga0066905_1011134071	3300005713	Tropical Forest Soil	VERRGQVTDVEIESTGNRRSSISRRKAAAFKRWHEP
Ga0066903_1051341731	3300005764	Tropical Forest Soil	VERRGWVTRAWIGEPTGNRRSSLIERKAAAFGEWHE
Ga0066903_1070320382	3300005764	Tropical Forest Soil	VMPVERRGWVTRAWIGEPTGNRRSSLIERKAAAFGEWHEPYKSRGLRTVL*
Ga0066794_101922181	3300005947	Soil	MLVERRGQVTDVGSEPTGNRRSSNSRRKATAFAWWHEPDEARVSSPESVRG
Ga0075019_107813931	3300006086	Watersheds	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRW
Ga0070712_1018113441	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPVERRGQVTDVGSESTGNRRSSNSRREAAAFVRWHEPDDARVSSPDL*
Ga0079222_104520642	3300006755	Agricultural Soil	MPVEQRGQVTDVGREPTGDRMSSNFRRKAAAFVSVARAG*
Ga0066797_12081431	3300006864	Soil	MPVEQRGQVTDVGSEPTGDRMSSNFRRKAAAFVSVARA
Ga0126380_114674971	3300010043	Tropical Forest Soil	MPVERRGQVTDVEIESTGNRRSSISRRKAAAFKRW
Ga0126373_112846641	3300010048	Tropical Forest Soil	RSGVIPVERRGQVTGVEIDRSTGNGMNRLSWRKAAAFTRWHEPDKLRGLCPVL*
Ga0127481_10627171	3300010101	Grasslands Soil	VERRGQVTDVGSEPTGNRKSSNSRREAAAFVRWHEPDDA
Ga0126318_100707601	3300010152	Soil	VERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSS
Ga0127503_107222451	3300010154	Soil	VERRGQVTDVGSEPTGNRRSSNSRWEAAAFVRWHEPDDARVS
Ga0126370_114808531	3300010358	Tropical Forest Soil	MPVERRGQVTDVESGPTGNRKSPISRREAAAFVRWHEPD
Ga0126378_133603641	3300010361	Tropical Forest Soil	MPAEQSGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEP
Ga0126360_10418041	3300010854	Boreal Forest Soil	VEQREQVIDVGREPTGNRMSSKSRRKAAAFVRWHEPDDARVSR
Ga0126355_11311841	3300010855	Boreal Forest Soil	MPAEQREQVIGVGSEPTGNRMNSSSRRKAAAFVRWHEPDDMRVSSPD
Ga0126345_10526331	3300010858	Boreal Forest Soil	VERRGQVTDVGSEPTGNRRSSNSRRKAAAFVRWHEPDDARVSSP
Ga0126348_12149601	3300010862	Boreal Forest Soil	VEQREQVIDAESEPTGNRMSSNSRRKAAAFVSVARA
Ga0126346_11834691	3300010865	Boreal Forest Soil	MPVEQREQVIDAEIEPTGDRMSSKSRRKAAAFVRWHEPDDARVSSPD
Ga0150985_1162519421	3300012212	Avena Fatua Rhizosphere	MPVEQRGQVTDVGSEPTGNRRSSDSRRKAAAFVRWHEPDDARVSSPDL
Ga0150985_1184076401	3300012212	Avena Fatua Rhizosphere	VERRGQVTDVGSEPTGNRRSSNSRRKAAAFARWHEPDDARVSSPD
Ga0150984_1012111101	3300012469	Avena Fatua Rhizosphere	VERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDAR
Ga0137404_120183341	3300012929	Vadose Zone Soil	EAGVMLVERRGQVIAVGSEPTGNRRSSNSRRKAAAFVRWHEPDDARVSSPDL*
Ga0126369_118793151	3300012971	Tropical Forest Soil	SDEAGVMPVERRGQVTDVEIESTGNRRSSISRRKAAAFKRWHEPEKSRGLRPVL*
Ga0126369_135966341	3300012971	Tropical Forest Soil	MGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRPESVSGSGRNS
Ga0164309_107919081	3300012984	Soil	SGVMPVEQRGQVTEVGSEPTGDRRSSNSRRKAAAFGWWHEPDDARVSSPDL*
Ga0164309_107919082	3300012984	Soil	VEQRGQVTEVGSEPTGDRRSSNSRRKAAAFGWWHE
Ga0163162_116166841	3300013306	Switchgrass Rhizosphere	ERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPDL*
Ga0181532_108098571	3300014164	Bog	VEQREPVIDVGSGPTGNRMSSNSRRKAAAFARWHEPDDARVSSPESVRG
Ga0182041_108266691	3300016294	Soil	MAVERRGQVTGVEIDRSTGNGRNHWSWRKAAAFTRWHEPDKLRG
Ga0182041_121665081	3300016294	Soil	MPAERREQVIDVEIEPTGNRMSSMSQWKAAAFMRWHEPDDARVSRPE
Ga0184635_102166811	3300018072	Groundwater Sediment	VEQRGQVTEVGSGPTGDRRSSNSRRKAAAFGWWHEPDDAR
Ga0184635_102166812	3300018072	Groundwater Sediment	VEQRGQVTEVGSGPTGDRRSSNSRRKAAAFGWWHEPDDARVSSPDL
Ga0184602_1264673	3300019161	Soil	MLVERRGQVTDVGREPTGNGRSSNSRLKAAAFARWHEPDDTRV
Ga0184589_1263151	3300019165	Soil	MPAERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSRPD
Ga0184587_1223362	3300019185	Soil	MLVERRGQVTDVGREPTANGRSSNSRLKAAAFARWHEPDDTRVS
Ga0184584_1307093	3300019187	Soil	MLVERRGQVTDVGREPTGNGRSSNSRRKAAAFARWHEPDDTRVSR
Ga0181502_11830862	3300019242	Peatland	MPVEQREQVIDAGSGPTGNRMISNPRRKAAAFVRWHEP
Ga0187797_14801571	3300019284	Peatland	VEQRGQVTDVGSEPTGNRRSSNSRRKAAAFVRWHEPDDARVSSP
Ga0187797_17726921	3300019284	Peatland	MPVEQRGQVIDVGSEPTGDRRSSNSRRKAAAFNRWHEPDEARASCP
Ga0206356_109298931	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVS
Ga0179585_10839151	3300021307	Vadose Zone Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDA
Ga0213881_106003341	3300021374	Exposed Rock	MPAEQRGQVIDVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRPESVSGSGRN
Ga0126371_110751572	3300021560	Tropical Forest Soil	MGWVIDAEIRSTGNRKSLMSWRKAAAFKRWHEPDDARVSRPESV
Ga0213854_11419451	3300021855	Watersheds	MLVERRGQVTDVGREPTGNGRSSNSRLKAAAFARWHEPDDTRVSRP
Ga0213854_13476302	3300021855	Watersheds	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPDL
Ga0213851_13473501	3300021860	Watersheds	MPVERREQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSP
Ga0213853_109704851	3300021861	Watersheds	MPVEQREQVIDVGSEPTGNRMSSNSPRKAAAFVRWHEPDDARVSSP
Ga0222625_12138151	3300022195	Groundwater Sediment	VEQRGQVTEVGSEPTGDRRSSNSRRKAAAFGWWHEPDDARVSSP
Ga0233356_10175812	3300023046	Soil	MPAEQREQVIGVGSEPTGNRMSSNSRRKAAAFVRWHEPD
Ga0247547_1037742	3300023656	Soil	MLVERRGQVTDVGREPTGNGRSSNSRRKAAAFARWHEPDDTRVS
Ga0208821_10677261	3300025432	Peatland	MLVERRGQVTDVGREPTGNGRSSNSRRKAAAFTAIIT
Ga0208850_10026994	3300025457	Arctic Peat Soil	MPAERRGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRPESVSDSG
Ga0208079_10967991	3300025481	Arctic Peat Soil	MLVEQRGQVTDVGSEPTGNRRSSNSRRKATAFAWWHEPDEARVSS
Ga0209124_102250911	3300025852	Arctic Peat Soil	MPAEQRGQVIGVGKEPTVKGRSFKSQRKAAAFVRRHEPDDARVSRPESVSD
Ga0207688_106237441	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSVRICERLGVK
Ga0207650_111436891	3300025925	Switchgrass Rhizosphere	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSS
Ga0209880_10770281	3300026271	Soil	MPAERRGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRPESVS
Ga0209438_11894951	3300026285	Grasslands Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSRPDL
Ga0257155_10581441	3300026481	Soil	MPVERRGQATDVGSEPTGNRRSSNSRRKAAAFARWHEPDDA
Ga0257153_10824491	3300026490	Soil	VERRGQVTDVGSEPTGNRRSSNSRWEAAAFVRWHEPDD
Ga0207823_1110051	3300026860	Tropical Forest Soil	VERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARV
Ga0207824_10340922	3300026990	Tropical Forest Soil	MLVERRGQVTDVGREPTGNGRSSNSRRKAAAFARGHEPDD
Ga0209729_10370841	3300027061	Forest Soil	MPAERRGQVIGVGKEPTVKGKSFKSQRKAAAFVRWHEPDDAR
Ga0208997_10278112	3300027181	Forest Soil	MPVERRGQVTDVESEPTGNRRSSDSRREAAAFVRWHEPDD
Ga0207826_11055351	3300027680	Tropical Forest Soil	MPVEQRGQVTDVGSEPTGNRRSSNSRRKAAAFAQWHEPDDARVSSPDVCPVKASMYSR
Ga0207826_11673851	3300027680	Tropical Forest Soil	MPAERRGQVIAVGIEPTGHRTSSISRRKAAAFKRWHEPDDARVSRPEAV
Ga0307312_110286211	3300028828	Soil	VEQRGQVTDVGSEPTGNRRSSNSRRKAAAFVRWHEPDDARV
Ga0311371_118400941	3300029951	Palsa	VEQREQVIDAGSGPTGNRMSSNPRRKAAAFVRWHEPDDARVSSPDL
Ga0302183_103193681	3300030509	Palsa	VEQREQVIDAGSGPTGNRMSSNPRRKAAAFVRWHEPDDARV
Ga0265462_115100021	3300030738	Soil	MLVERRGQVTDVGREPTGNGRSSNSRLKAAAFARWHEPDDTRVS
Ga0265763_10090912	3300030763	Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVS
Ga0265763_10135222	3300030763	Soil	MPAERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVS
Ga0265766_10167981	3300030863	Soil	MPAEQREQVIGVGSEPTGNSMSSNSRRKAAAFVRWHEPDDARVS
Ga0308206_11382211	3300030903	Soil	VEQRGQVTEVGSGPTGDRRSSNSRRKAAAFGWWHEPDDARVSSP
Ga0308155_10310121	3300030987	Soil	VEQRGQVTEVGSEPTGDRRSSNSRRKAAAFGWWHEPDDARVS
Ga0265773_10154382	3300031018	Soil	MLVERRGQVTDVGREPTGNGRSSNSRRKAAAFARWHEPD
Ga0265779_1102241	3300031043	Soil	MPAERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSP
Ga0308192_10783871	3300031082	Soil	VEQRGQVTEVGSGPTGDRRSSNSRRKAAAFGWWHEPDDARV
Ga0308204_101666821	3300031092	Soil	VERRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSP
Ga0308195_10710821	3300031123	Soil	MPVERRGQVTDVGREPTGNGRSSNSRRKAAAFARWHEPDES
Ga0307497_106628691	3300031226	Soil	VERRGQVTDVGSESTGNRRSSNSRRKAAAFRRWHEPDDAR
Ga0318516_104383591	3300031543	Soil	VERRGQVTDVEIESTGNRRSSISRRKAAAFKRWHEPEKSRGL
Ga0318538_105196941	3300031546	Soil	VERRGQVTDVEIESTGNRRSSISRRKAAAFKRWHE
Ga0307484_1137541	3300031663	Hardwood Forest Soil	MPAERRGQVIDVGSEPTDNRRSSNSRREAAAFIRWHEPDDARVSSPD
Ga0318561_105304771	3300031679	Soil	MPAEQSGQVIGVGKEPTVKGRSFKSQRKAAAFVRWHEPDDARVSRLDL
Ga0318561_105841181	3300031679	Soil	VERRGQVTDVESEPTGNRRSSNSRRKAAAFAQWHEPDDARVSS
Ga0307477_103789191	3300031753	Hardwood Forest Soil	MPVERRGQVTDVGSEPTGNRRSSNSRREAAVFARWHEPDDARVSRP
Ga0318508_12258551	3300031780	Soil	VERRGQVTGVEIESTGNRRSSISRRKAAAFKRWHEPEKSRGL
Ga0318547_108934332	3300031781	Soil	MPAERREQVIDVEIEPTGNRMSSMSQWKAAAFMRWHEPDDAR
Ga0318552_103018121	3300031782	Soil	MPTERREQVIDVEIEPTGNRTSSMFQRKAAAFIRWHEPDDARVSRPESVSGSG
Ga0318523_103862941	3300031798	Soil	VERRGQVTDVGSEPTGNRRSSNSRRKAAAFARWHEPDDTRVSSPDLV
Ga0310917_109615562	3300031833	Soil	VERRGQVTDVGSEPTGNRRSFNSRREAAAFVRWHEPDDARVSSPDL
Ga0316049_1145042	3300031866	Soil	MLVERRGQVTDVGREPTGNGRSSNSRLKAAAFARWHEPD
Ga0310912_111686131	3300031941	Soil	MAVERRGQVTGVEIDRSTGNGRNHWSWRKAAAFTR
Ga0306922_100547211	3300032001	Soil	MPVERRGQITDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPDL
Ga0318504_101971161	3300032063	Soil	MPVERRGQVTGVEIESTGNRRSSISRRKAAAFKRWHEPEKSRGLRPVL
Ga0318553_103259062	3300032068	Soil	VEPRGQVIDVETEPTGNRTSSIFQRKAAAFNRWHEPDKSRG
Ga0306924_112205711	3300032076	Soil	VERRGQVTGVEIESTGNRRSSISRRKAAAFKRWHEPEKS
Ga0318540_104067322	3300032094	Soil	MPVERRGQVTDVEIESTGNRRSSISRRKAAAFKRWHEPEKSR
Ga0310914_100438281	3300033289	Soil	MPVKRRGQVTDVGSEPTGNRRSSNSRREAAAFVRWHEPDDARVSSPD
Ga0370544_16370_2_133	3300034447	Soil	MEQRGQVTEVGSEPTGDRRSSNSRREAAAFVRWHEPDDARVSSP

Hidden Markov Model


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