NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090442

Metagenome / Metatranscriptome Family F090442

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090442
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 51 residues
Representative Sequence VINEPNVAIVFHSLYESGKSGIRRGIPANPKKCIGKKQRLTPINVVQK
Number of Associated Samples 64
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 8.33 %
% of genes near scaffold ends (potentially truncated) 62.96 %
% of genes from short scaffolds (< 2000 bps) 88.89 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (72.222 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(35.185 % of family members)
Environment Ontology (ENVO) Unclassified
(75.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.667 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.42%    β-sheet: 0.00%    Coil/Unstructured: 81.58%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00115COX1 82.24
PF02326YMF19 1.87
PF00507Oxidored_q4 1.87
PF02790COX2_TM 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0711FoF1-type ATP synthase, membrane subunit b or b'Energy production and conversion [C] 1.87
COG0838NADH:ubiquinone oxidoreductase subunit 3 (chain A)Energy production and conversion [C] 1.87
COG1622Heme/copper-type cytochrome/quinol oxidase, subunit 2Energy production and conversion [C] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.22 %
All OrganismsrootAll Organisms27.78 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006374|Ga0075512_1315903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile681Open in IMG/M
3300006384|Ga0075516_1365734Not Available549Open in IMG/M
3300006397|Ga0075488_1002429Not Available1397Open in IMG/M
3300006397|Ga0075488_1002853All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa2056Open in IMG/M
3300006720|Ga0031675_1007969All Organisms → cellular organisms → Eukaryota518Open in IMG/M
3300007325|Ga0079257_1079706All Organisms → cellular organisms → Eukaryota1063Open in IMG/M
3300007331|Ga0079271_1289572Not Available652Open in IMG/M
3300007333|Ga0079270_1066741Not Available660Open in IMG/M
3300007333|Ga0079270_1413184Not Available863Open in IMG/M
3300007333|Ga0079270_1457258Not Available705Open in IMG/M
3300007334|Ga0079269_1070343Not Available1793Open in IMG/M
3300007601|Ga0102772_1007258Not Available541Open in IMG/M
3300007604|Ga0102771_1227953Not Available568Open in IMG/M
3300007610|Ga0102778_1329800Not Available717Open in IMG/M
3300007610|Ga0102778_1366972Not Available1532Open in IMG/M
3300007610|Ga0102778_1391596All Organisms → cellular organisms → Eukaryota1843Open in IMG/M
3300007615|Ga0102773_1256108All Organisms → cellular organisms → Eukaryota927Open in IMG/M
3300008564|Ga0103930_1501Not Available536Open in IMG/M
3300008916|Ga0103481_1001430Not Available1123Open in IMG/M
3300008993|Ga0104258_1047948Not Available799Open in IMG/M
3300009214|Ga0103830_1030172Not Available519Open in IMG/M
3300009334|Ga0103841_1003116Not Available692Open in IMG/M
3300009334|Ga0103841_1004371Not Available618Open in IMG/M
3300009340|Ga0103838_1003387Not Available692Open in IMG/M
3300009390|Ga0103831_1024275Not Available504Open in IMG/M
3300009543|Ga0115099_10098791Not Available1048Open in IMG/M
3300009543|Ga0115099_10404852Not Available541Open in IMG/M
3300009543|Ga0115099_10483750Not Available579Open in IMG/M
3300009543|Ga0115099_10667145Not Available6075Open in IMG/M
3300009543|Ga0115099_10667145Not Available6075Open in IMG/M
3300009543|Ga0115099_10754706All Organisms → cellular organisms → Eukaryota2442Open in IMG/M
3300009543|Ga0115099_10958265All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida1424Open in IMG/M
3300009550|Ga0115013_10302890Not Available990Open in IMG/M
3300009550|Ga0115013_11247849All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta544Open in IMG/M
3300009592|Ga0115101_1050720Not Available1434Open in IMG/M
3300009592|Ga0115101_1300777All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida1605Open in IMG/M
3300009592|Ga0115101_1486790All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida2344Open in IMG/M
3300009592|Ga0115101_1590971Not Available939Open in IMG/M
3300009593|Ga0115011_11524978Not Available591Open in IMG/M
3300009599|Ga0115103_1690398Not Available749Open in IMG/M
3300009599|Ga0115103_1810134All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta766Open in IMG/M
3300009606|Ga0115102_10234976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile910Open in IMG/M
3300009677|Ga0115104_10040492All Organisms → cellular organisms → Bacteria2768Open in IMG/M
3300009677|Ga0115104_10149059Not Available1858Open in IMG/M
3300009677|Ga0115104_10427383All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta1464Open in IMG/M
3300009677|Ga0115104_10508319All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida2158Open in IMG/M
3300009677|Ga0115104_10531985Not Available1960Open in IMG/M
3300009677|Ga0115104_10574251Not Available1436Open in IMG/M
3300009677|Ga0115104_10605067Not Available534Open in IMG/M
3300009677|Ga0115104_10758274All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida1363Open in IMG/M
3300009677|Ga0115104_10796164All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida1365Open in IMG/M
3300009677|Ga0115104_10894729Not Available743Open in IMG/M
3300009677|Ga0115104_10894921Not Available1907Open in IMG/M
3300009677|Ga0115104_10928732Not Available2525Open in IMG/M
3300009677|Ga0115104_11129524Not Available1112Open in IMG/M
3300009677|Ga0115104_11177101Not Available519Open in IMG/M
3300009677|Ga0115104_11210841Not Available512Open in IMG/M
3300009677|Ga0115104_11278239Not Available1436Open in IMG/M
3300009679|Ga0115105_10646784All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales2312Open in IMG/M
3300009679|Ga0115105_10648041Not Available2137Open in IMG/M
3300009679|Ga0115105_11034245Not Available1054Open in IMG/M
3300009679|Ga0115105_11269879All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays951Open in IMG/M
3300009679|Ga0115105_11367097All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Adephaga → Caraboidea → Carabidae → Trechinae → Trechini → Paraphaenops1124Open in IMG/M
3300009728|Ga0123371_128747Not Available904Open in IMG/M
3300009735|Ga0123377_1011184Not Available1168Open in IMG/M
3300009741|Ga0123361_1121090Not Available1434Open in IMG/M
3300009748|Ga0123370_1108429All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Chattonella → Chattonella marina584Open in IMG/M
3300010883|Ga0133547_10956050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile1663Open in IMG/M
3300010885|Ga0133913_10190776Not Available5466Open in IMG/M
3300011120|Ga0150983_15694909Not Available823Open in IMG/M
3300011300|Ga0138364_1057834Not Available641Open in IMG/M
3300011315|Ga0138402_1052298Not Available857Open in IMG/M
3300011315|Ga0138402_1104627Not Available569Open in IMG/M
3300011326|Ga0138403_1085243All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta518Open in IMG/M
3300011326|Ga0138403_1237660Not Available592Open in IMG/M
3300011330|Ga0138383_1000170Not Available573Open in IMG/M
3300011330|Ga0138383_1094948Not Available594Open in IMG/M
3300011330|Ga0138383_1124432Not Available801Open in IMG/M
3300011330|Ga0138383_1134509All Organisms → cellular organisms → Eukaryota1590Open in IMG/M
3300011331|Ga0138384_1332265Not Available512Open in IMG/M
3300012370|Ga0123369_1005110Not Available1809Open in IMG/M
3300012394|Ga0123365_1018542Not Available532Open in IMG/M
3300012394|Ga0123365_1090192Not Available500Open in IMG/M
3300012412|Ga0138266_1104837All Organisms → cellular organisms → Eukaryota2225Open in IMG/M
3300012413|Ga0138258_1299398Not Available797Open in IMG/M
3300012415|Ga0138263_1233267Not Available917Open in IMG/M
3300012418|Ga0138261_1557562Not Available616Open in IMG/M
3300012419|Ga0138260_10345935Not Available1447Open in IMG/M
3300012504|Ga0129347_1301277Not Available744Open in IMG/M
3300012523|Ga0129350_1179444Not Available1210Open in IMG/M
3300012523|Ga0129350_1273446Not Available538Open in IMG/M
3300012708|Ga0157595_1056209All Organisms → cellular organisms → Eukaryota → Opisthokonta1398Open in IMG/M
3300012729|Ga0157625_1251465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1464Open in IMG/M
3300012773|Ga0138290_1055072Not Available1645Open in IMG/M
3300012780|Ga0138271_1127198All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1566Open in IMG/M
3300012782|Ga0138268_1636812Not Available1538Open in IMG/M
3300012920|Ga0160423_10226367Not Available1298Open in IMG/M
3300012952|Ga0163180_10845186Not Available720Open in IMG/M
3300012966|Ga0129341_1023141Not Available621Open in IMG/M
3300012969|Ga0129332_1380603Not Available786Open in IMG/M
3300013295|Ga0170791_12415591Not Available1827Open in IMG/M
3300014325|Ga0163163_11032722Not Available885Open in IMG/M
3300018639|Ga0192864_1045063Not Available651Open in IMG/M
3300019048|Ga0192981_10038785Not Available1645Open in IMG/M
3300019049|Ga0193082_10827985Not Available521Open in IMG/M
3300026495|Ga0247571_1112512Not Available635Open in IMG/M
3300026495|Ga0247571_1119359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria616Open in IMG/M
3300028333|Ga0247595_1045292Not Available727Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine35.19%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine30.56%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous8.33%
Polar MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine5.56%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water4.63%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.78%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.78%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.85%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.93%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.93%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.93%
Coastal WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Coastal Water0.93%
Ocean WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water0.93%
Bay WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300006374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006384Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006397Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006720Metatranscriptome of deep ocean microbial communities from Atlantic Ocean - MP2618 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007325Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S9 Surf_B metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007331Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 DCM_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007333Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Surf_B metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007334Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Surf_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007601Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM1_B metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007604Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM1_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007610Marine microbial communities from the Southern Atlantic ocean - KN S15 Surf_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007615Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM2_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300008564Planktonic microbial communities from coastal waters of California, USA - Canon-33EnvironmentalOpen in IMG/M
3300008916Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - KA2EnvironmentalOpen in IMG/M
3300008993Marine microbial communities from eastern North Pacific Ocean - P1 free-livingEnvironmentalOpen in IMG/M
3300009214Microbial communities of water from the North Atlantic ocean - ACM51EnvironmentalOpen in IMG/M
3300009334Microbial communities of water from the North Atlantic ocean - ACM46EnvironmentalOpen in IMG/M
3300009340Microbial communities of water from the North Atlantic ocean - ACM60EnvironmentalOpen in IMG/M
3300009390Microbial communities of water from the North Atlantic ocean - ACM34EnvironmentalOpen in IMG/M
3300009543Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009592Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009606Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009677Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009679Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009728Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_213_2m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009735Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_240_2m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009741Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_193_2m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009748Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_210_18m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011300Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S9 DCM_A metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011315Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S21 Surf_A metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011326Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S21 Surf_B metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011330Marine microbial communities from the Southern Atlantic ocean - KN S17 Surf_A metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011331Marine microbial communities from the Southern Atlantic ocean - KN S17 Surf_B metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012370Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_209_2m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012394Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_201_2m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012412Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA24.B_192.20151118 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012413Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012415Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012418Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012419Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA10.B_24.20151111 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012504Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012523Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012708Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES113 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012729Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES157 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012773Freshwater microbial communities from Lake Simoncouche, Canada - S_140212_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012780Freshwater microbial communities from Lake Croche, Canada - C_130625_M_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012782Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA30.ICE_1m.20151125 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012966Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012969Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300018639Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_066 - TARA_N000000791 (ERX1782310-ERR1712181)EnvironmentalOpen in IMG/M
3300019048Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001030 (ERX1782209-ERR1712166)EnvironmentalOpen in IMG/M
3300019049Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_064 - TARA_N000000531 (ERX1782179-ERR1712232)EnvironmentalOpen in IMG/M
3300026495Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 24R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028333Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 60R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0075512_131590313300006374AqueousKNTVDTRVINDPKDAIVFHSWKASGKSGIRRGIPANPRKCIGKNVKFTPMKVVQK*
Ga0075516_136573423300006384AqueousMVETIVIIEPTDAIVFHWLNESGKSGIRRGIPAKPKKCIGKKQTLTPINVVQKWILPKTSQ*
Ga0075488_100242913300006397AqueousVDTRVINDPKDAIVFHSWKASGKSGIRRGIPANPRKCIGKNVKFTPMKVVQK*
Ga0075488_100285353300006397AqueousVETVVMKEPIVAMVFHSVYESGKSGILRGIPANPKKCIGKKHKFTPIKVVQK*
Ga0031675_100796913300006720Deep OceanTVDTSVMNEPNEAIVFHSWKASGKSGIRRGIPANPRKCIGKNVRFTPINVVQKWIFPRTSG*
Ga0079257_107970633300007325MarineKKAVEAIVIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNTSG*
Ga0079271_128957233300007331MarineKVAIEFHSEYASGKSGIRRGIPAKPKKCIGKNVTLTPIKVVQKCILPNASS*
Ga0079270_106674113300007333MarineMIEPNVAIVFQDAYESGKSGIRRGIPANPKKCIGKKQTFTPTKVAQK*
Ga0079270_141318413300007333MarineVINEPNVAIVFHSLYESGKSGIRRGIPANPKKCIGKKQRLTPINVVQK*
Ga0079270_145725813300007333MarinePNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNASG*
Ga0079269_107034313300007334MarineAIVFQLEYESGKSGIRRGIPANPKKCIGKKHTLTPTNVDQK*
Ga0102772_100725813300007601MarineVATVVMIEPNVAIVFQDAYESGKSGIRRGIPANPKKCIGKKQTFTPTKVAQK*
Ga0102771_122795333300007604MarineFQLEYESGKSGIRRGIPANPKKCIGKKHTLTPTNVDQK*
Ga0102778_132980013300007610MarineMNEPNVAIEFHAEYESGKSGILRGIPANPKKCIGKNVTLTPINVVQK*
Ga0102778_136697253300007610MarineYTKKSVATVVMIEPNVAIVFQDAYESGKSGIRRGIPANPKKCIGKKQTFTPTKVAQK*
Ga0102778_139159613300007610MarineKTKKAVEAIVIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNTSG*
Ga0102773_125610813300007615MarineEATVFQALYASGKSGILLGIPAKPKKCIGKKQRLTPIKVVQKCICPRTSL*
Ga0103930_150113300008564Coastal WaterALYESGKSGIRRGIPARPKKCIGKKHKLTPMKVVQK*
Ga0103481_100143043300008916Bay WaterMKKALATVVIIEPKVATLFHAEYESGKSGTRRGIPAKPRKCIGKKHTLTPMKVDQK*
Ga0104258_104794823300008993Ocean WaterMKKKSIVEIIVIIDPNEAMLFQPPKASGKSGIRLGIPAKPKKCIGKKVKFTPMKVVQK*
Ga0103830_103017223300009214River WaterMNEPKDAIIFQSEYESGKSGIRRGIPAKPRKCIGKKHKLTPIKVDQK*
Ga0103841_100311633300009334River WaterMKEPNVAMLFQGLYASGKSGIRLGIPAKPKKCIGKKQTLTPIKVVQK*
Ga0103841_100437133300009334River WaterKAVEAIVIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNTSG*
Ga0103838_100338713300009340River WaterMLFQLEYESGKSGIRRGIPAKPRKCIGKKQTLTPTNVDQK*
Ga0103831_102427513300009390River WaterLFQLEYESGKSGIRRGIPAKPRKCIGKKQTLTPINVAQK*
Ga0115099_1009879123300009543MarineMIYIKNVVETIVITEPIEAIVFHCVYASGKSGMRLGIPARPKKCIGKKQTLTPMKVDQK*
Ga0115099_1040485223300009543MarineVEIIVINEPTVAIAFHCAKASGKSGILRGIPAKPKKCIGKKHKLTPIKVVQK*
Ga0115099_1048375023300009543MarineYAKKILDTVVIKEPKVAMVFHSLYESGKSGILRGIPAKPRKCIGKKHTFTPIKVVQKWIFPKVSS*
Ga0115099_1066714523300009543MarineMYTNSNVDTVVMIDPYVAIVFQLEYESGKSGIRRGIPAKPKKCIGKKQTLTPIKVVQK*
Ga0115099_1066714593300009543MarineVVINEPTVAIEFHSVKASGKSGIRRGIPANPKKCIGKKVKLTPTNVDQKWILPKVSS*
Ga0115099_1075470613300009543MarineVINEPNVAILFHGLYASGKSGIRLGIPANPKKCIGKKQTFTPIKVVQK*
Ga0115099_1095826513300009543MarineDAIVIKEPRDAILFHALKASGKSGILLGIPAKPKKCIGKKHKLTPIKVVQK*
Ga0115013_1030289013300009550MarineLEYESGKSGIRLGIPAKPRKCIGKKQTLTPTNVDQK*
Ga0115013_1124784913300009550MarineNAKKSVEAVVMKEPRVAILFHCEYASGKSGIRRGIPANPKKCIGKKQTFTPIKVVQK*
Ga0115101_105072013300009592MarineIVEAIVIKDPIDAILFQALKASGKSGILLGIPAKPKKCIGKKHKLTPIKVVQK*
Ga0115101_130077713300009592MarineAILFHCEYASGKSGIRLGIPARPRKCIGKKQRLTPIKVVQKCIFPKTSS*
Ga0115101_148679013300009592MarineMKSNVETVVIIEPNVAIVFQPAYESGKSGIRRGIPAKPKKCIGKKQTLTPTNVDQK*
Ga0115101_159097133300009592MarineVEIVVINEPNVAILFHALNASGKSGIRRGIPAIPKKCIGKKQTLTPMKVVQK*
Ga0115011_1152497823300009593MarineVDTVVINDPSVAIAFHCAYESGKSGIRRGIPAKPRKCIGKKHKLTPINVVQK*
Ga0115103_169039843300009599MarineAIEFQPLKASGKSGIRLGIPAKPKKCIGKKVTFTPIKKIQK*
Ga0115103_181013433300009599MarineKEPKVAMVFHSLYESGKSGILRGIPAKPRKCIGKKHTFTPIKVVQK*
Ga0115102_1023497643300009606MarineFQPAYESGKSGIRRGIPANPKKCIGKKHTFTPIKVAQK*
Ga0115104_1004049213300009677MarineMNDPKEAIVFHSLKASGKSGIRRGIPAKPRKCIGKKVRFTPIKVVQK*
Ga0115104_1014905963300009677MarineVINEPNVAIEFHALYESGKSGIRRGIPAKPRKCIGKKHKLTPINVVQK*
Ga0115104_1042738313300009677MarineKITYTKNIVDTIVMIEPIEAMLFHCVYASGKSGIRLGIPAKPRKCIGKKQTLTPMKVDQK
Ga0115104_1050831913300009677MarinePNVAIVFHCVYASGKSGIRRGIPAKPRKCIGKKHKLTPTNVDQK*
Ga0115104_1053198553300009677MarineVAIIFQLEYESGKSGIRRGIPASPKKCIGKKQTFTPINVDQK*
Ga0115104_1057425113300009677MarineRVINDPKDAIVFHSWKASGKSGIRRGIPANPRKCIGKNVRFTPIKVVQK*
Ga0115104_1060506713300009677MarineVIKEPIDAILFQALKASGKSGIRLGIPAKPKKCIGKKHKLTPIKVVQK*
Ga0115104_1075827443300009677MarineAIVFQLEYESGKSGIRRGIPANPKKCIGKKQTFTPINVVQK*
Ga0115104_1079616413300009677MarineIIDPKVAIEFQAAYESGKSGIRRGIPAKLRKCIGKKQTLTPINVDQK*
Ga0115104_1089472913300009677MarineQKKIVEIVVINEPNVAILFHALKASGKSGTRRGIPAIPKKCIGKKQTLTPINVVQKWIFPSASS*
Ga0115104_1089492113300009677MarineVETKVTNEPKDATMFQLEYESGKSGIRRGIPAKPKKCIGKKHKLTPIKVVQK*
Ga0115104_1092873253300009677MarineVITEPNVAMLFQAEYESGKSGIRRGIPANPRKCIGKKQTFTPTNVAQK*
Ga0115104_1112952433300009677MarineIVINEPIEAILFQALYESGKSGIRRGIPARPKKCIGKKHKLTPIKVVQK*
Ga0115104_1117710123300009677MarineTIVIMEPTDAIVFHCVYASGKSGIRLGIPARPKKCIGKKQTLTPMNVDQK*
Ga0115104_1121084113300009677MarineVINEPNVAIVFHCVYASGKSGIRRGIPAKPRKCIGKKHKLTPMNVDQK*
Ga0115104_1127823913300009677MarineTRVMNDPKDAIVFHPWKASGKSGIRRGIPANPRKCIGKNVKLTPMKVVQK*
Ga0115105_1064678433300009679MarineVINDPKDAIVFHSWKASGKSGIRRGIPANPRKCIGKNVRFTPIKVVQK*
Ga0115105_1064804143300009679MarineMIYIKKREENIVIKEPIVAIEFHCVYESGKSGIRRGIPAKPKKCIGKKHKFTPMKVVQK*
Ga0115105_1103424533300009679MarineEIVVINDPAVAIEFHWLKASGKSGIRRGIPASPKKCIGKKHKFTPIKVVQK*
Ga0115105_1126987913300009679MarineKDAIVFHSWKASGKSGIRRGIPANPKKCIGKKHRLTPMKVVQK*
Ga0115105_1136709733300009679MarineSWKASGKSGIRRGIPANPRKCIGKNVKFTPMKVVQK*
Ga0123371_12874733300009728MarineVKVAKTTYAKKIVDIVVMKEPKVAIVFHSLYESGKSGIRRGIPAKPRKCIGKKQIFTPINVVQK*
Ga0123377_101118423300009735MarineILFHCEYESGKSGIRRGIPAKHKKCIGKKQTFTPINVDQKWILPIQ*
Ga0123361_112109013300009741MarineRVINDPKDAIVFHSWKASGKSGIRRGIPANPRKCIGKNVKFTPMKVVQK*
Ga0123370_110842913300009748MarineFHSEYASGKSGILRGIPAKPKKCIGKKHKFTPIKVLQK*
Ga0133547_1095605053300010883MarineMYTKNKVATVVIIEPIVAIVFQPAYESGKSGILRGIPANPKKCIGKKHTFTPIKVAQK*
Ga0133913_1019077683300010885Freshwater LakeVIIEPTDEMLFQKPNASGKSGIRLGIPAKPRKCIGKKQTLTPMKVDQKWILPRYSL*
Ga0150983_1569490913300011120Forest SoilTKFQPAYESGKSGILRGIPANPKKCCGKKVKLTPMKSVQK*
Ga0138364_105783413300011300MarineMVETVVIIEPTVAIVFQFAYESGKSGIRRGIPAKPRKCIGKKQTLTPINVDQK*
Ga0138402_105229823300011315MarineEAIVIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNTSG*
Ga0138402_110462713300011315MarineKPKKIVETIVINDPNVATEFQAEYASGKSGIRRGIAASPRKCIGKKHKFTPINVVQK*
Ga0138403_108524313300011326MarineIKEPKVATEFHAEYASGKSGIRRGIAASPRKCIGKKHKLTPTNVLQKWIFPRTSLY*
Ga0138403_123766013300011326MarineVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNTSG*
Ga0138383_100017013300011330MarineKKAVEAIVIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHRLTPINVVQKWILPNTSG*
Ga0138383_109494823300011330MarineMIDPYVAIWFQFEYESGKSGIRRGIPANPRKCIGKKQTLTPIKVDQK*
Ga0138383_112443213300011330MarineVFHSLYESGKSGILRGIPAKPRKCIGKKHTFTPIKVVQKWIFPKVSS*
Ga0138383_113450953300011330MarineAIVIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNASG*
Ga0138384_133226513300011331MarineIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNTSG*
Ga0123369_100511013300012370MarineVMKEPKVAIVFHSLYESGKSGIRRGIPAKPRKCIGKKQIFTPINVVQK*
Ga0123365_101854223300012394MarineMQKKNVETVVINDPKVAIEFHSEYESGKSGILRGIPANPKKCIGKKHKLTPTNVDQK*
Ga0123365_109019223300012394MarineMKEPNVAMLFQGLYASGKSGIRLGIPAKPKKCIGKKHTLTPIKVVQK*
Ga0138266_110483723300012412Polar MarineMEPNDAIVFHSLYASGKSGIRLGIPAKPKKCIGKNVKFTPIKVVQK*
Ga0138258_129939823300012413Polar MarineVVIKEPKVAILFQPAKASGKSGMRRGIPAKPKKCIGKKHKLTPKNVVQK*
Ga0138263_123326713300012415Polar MarinePNEAIVFHPLYASGKSGIRLGIPAKPKKCIGKKVKLTPMKVVQK*
Ga0138261_155756213300012418Polar MarineEAIVFHPLYASGKSGIRLGIPAKPKKCIGKKVKLTPMKVVQK*
Ga0138260_1034593513300012419Polar MarineIVIIEPNEAIVFHPLYASGKSGIRLGIPAKPKKCIGKKVKLTPMKVVQK*
Ga0129347_130127713300012504AqueousMNEPKVATEFHAEYESGKSGIRRGIPAKPKKCIGKNVTLTPINVVQK*
Ga0129350_117944433300012523AqueousMKEPNVAILFHCEYASGKSGIRRGIPANPKKCIGKKQTFTPINVVQK*
Ga0129350_127344623300012523AqueousEFHSLYASGKSGIRLGIPAKPKKCIGKKQTFTPIKVVQK*
Ga0157595_105620943300012708FreshwaterSTEIIEPQDAILLKPINASGKSGIRRGIPAKPKKCIGKKVKLTPIKNVQK*
Ga0157625_125146563300012729FreshwaterKEATLFHPANASGKSGILLGIPANPKKCIGKKVTLTPIKKVQK*
Ga0138290_105507253300012773Freshwater LakeITEPTLAIVFQPAYESGKSGILRGIPANPKKCIGKKQTLTPINVDQK*
Ga0138271_112719813300012780Freshwater LakeYEPREATLFHPTYESGKSGIRRGIPANPKKCIGKKVKLTPKKNIQK*
Ga0138268_163681213300012782Polar MarineVIIEPNEAIVFHPLYASGKSGIRLGIPAKPKKCIGKKVKLTPMKVVQK*
Ga0160423_1022636733300012920Surface SeawaterMIDPNVATVFQPEYESGKSGIRRGIPAKPKKCIGKKQTFTPTKVAQK*
Ga0163180_1084518613300012952SeawaterMKEPNEAIVFHPEYESGKSGIRRGIPAKPKKCIGKKVTLTPIKVVQKCILPKASS*
Ga0129341_102314113300012966AqueousVIIEPTVAIVFQLAYESGKSGIRRGIPANPKKCIGKKQTFTPIKVVQK*
Ga0129332_138060343300012969AqueousIDPIVAIKFHSENESGKSGIRRGMPASPRKCIGKKHKLTPTNVDQKCIFPRASE*
Ga0170791_1241559153300013295FreshwaterTEPTLAIVFQPAYESGKSGILRGIPANPKKCIGKKQTLTPINVDQK*
Ga0163163_1103272213300014325Switchgrass RhizospherePKEANEFQAAKASGKSGILRGIPERPKKCIGKKVRLTPIKVVQKCICAKTSL*
Ga0192864_104506333300018639MarineTVETSVINDPKDAIVFHSWKASGKSGIRRGIPASPRKCIGKNVKFTPMKVVQK
Ga0192981_1003878523300019048MarineMEPNDAIVFHSLYASGKSGIRLGIPAKPKKCIGKNVKFTPIKVVQK
Ga0193082_1082798513300019049MarineMKEPNEAIVFHPEYESGKSGIRRGIPAKPRKCIGKKQTFTPINVDQKXIFPPC
Ga0247571_111251213300026495SeawaterIVFQLEYESGKSGIRRGIPAKPKKCIGKKHTLTPINVDQK
Ga0247571_111935933300026495SeawaterILIIDPIEAIVFHAAYESGKSGMRRGIPASPRKCIGKKQTLTPMKVDQK
Ga0247595_104529223300028333SeawaterMETKKALETIVIQLPKLAILFQALKLSGKSGTLRGIPAKPKKCIGKKHKFTPIKVVQK


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