Sample 3300009340

3300009340: Microbial communities of water from the North Atlantic ocean - ACM60

Overview

Basic Information
IMG/M Taxon OID	3300009340 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117984 \| Gp0126427 \| Ga0103838
Sample Name	Microbial communities of water from the North Atlantic ocean - ACM60
Sequencing Status	Permanent Draft
Sequencing Center	University of Georgia
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	38393926
Sequencing Scaffolds	41
Novel Protein Genes	50
Associated Families	34

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	9
Not Available	9
All Organisms → cellular organisms → Eukaryota	7
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	6
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Tunicata → Appendicularia → Copelata → Oikopleuridae → Oikopleura → Oikopleura dioica	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida	2
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Aquatic Microbial Communities From Amazon River, Brazil And North Atlantic Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water → Aquatic Microbial Communities From Amazon River, Brazil And North Atlantic Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → surface water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	North Pacific Ocean
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000048	Metagenome / Metatranscriptome	3365	Y
F000070	Metagenome / Metatranscriptome	2710	N
F000075	Metagenome / Metatranscriptome	2622	Y
F000147	Metagenome / Metatranscriptome	1917	Y
F000237	Metagenome / Metatranscriptome	1498	Y
F000491	Metatranscriptome	1079	Y
F001583	Metagenome / Metatranscriptome	668	Y
F002297	Metatranscriptome	573	Y
F002556	Metagenome / Metatranscriptome	548	Y
F003009	Metagenome / Metatranscriptome	513	Y
F003081	Metagenome / Metatranscriptome	508	Y
F003495	Metagenome / Metatranscriptome	483	Y
F004023	Metagenome / Metatranscriptome	456	Y
F005202	Metatranscriptome	408	N
F005505	Metagenome / Metatranscriptome	398	Y
F007792	Metatranscriptome	344	N
F009309	Metagenome / Metatranscriptome	319	Y
F011139	Metagenome / Metatranscriptome	294	Y
F013645	Metagenome / Metatranscriptome	269	Y
F024323	Metagenome / Metatranscriptome	206	Y
F027191	Metagenome / Metatranscriptome	195	Y
F030403	Metatranscriptome	185	Y
F032157	Metagenome / Metatranscriptome	180	Y
F032526	Metagenome / Metatranscriptome	179	N
F034058	Metagenome / Metatranscriptome	175	Y
F038531	Metatranscriptome	165	N
F041572	Metatranscriptome	159	N
F043763	Metatranscriptome	155	N
F049398	Metatranscriptome	146	N
F061512	Metatranscriptome	131	N
F065388	Metatranscriptome	127	N
F065401	Metatranscriptome	127	N
F090441	Metatranscriptome	108	N
F090442	Metagenome / Metatranscriptome	108	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0103838_1000961	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1064	Open in IMG/M
Ga0103838_1001012	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1045	Open in IMG/M
Ga0103838_1001122	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1009	Open in IMG/M
Ga0103838_1001386	Not Available	949	Open in IMG/M
Ga0103838_1001520	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	919	Open in IMG/M
Ga0103838_1001948	All Organisms → cellular organisms → Eukaryota	842	Open in IMG/M
Ga0103838_1001961	Not Available	840	Open in IMG/M
Ga0103838_1002097	Not Available	820	Open in IMG/M
Ga0103838_1002310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	792	Open in IMG/M
Ga0103838_1002331	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	788	Open in IMG/M
Ga0103838_1002668	Not Available	754	Open in IMG/M
Ga0103838_1002773	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	744	Open in IMG/M
Ga0103838_1002802	Not Available	741	Open in IMG/M
Ga0103838_1002853	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	736	Open in IMG/M
Ga0103838_1002871	All Organisms → cellular organisms → Eukaryota	734	Open in IMG/M
Ga0103838_1003341	All Organisms → cellular organisms → Eukaryota	696	Open in IMG/M
Ga0103838_1003387	Not Available	692	Open in IMG/M
Ga0103838_1003662	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Tunicata → Appendicularia → Copelata → Oikopleuridae → Oikopleura → Oikopleura dioica	674	Open in IMG/M
Ga0103838_1003725	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida	669	Open in IMG/M
Ga0103838_1003772	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	666	Open in IMG/M
Ga0103838_1004654	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	620	Open in IMG/M
Ga0103838_1004849	Not Available	612	Open in IMG/M
Ga0103838_1005046	All Organisms → cellular organisms → Eukaryota → Sar	605	Open in IMG/M
Ga0103838_1005470	All Organisms → cellular organisms → Eukaryota	587	Open in IMG/M
Ga0103838_1005577	Not Available	584	Open in IMG/M
Ga0103838_1006032	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	569	Open in IMG/M
Ga0103838_1006148	All Organisms → cellular organisms → Eukaryota	565	Open in IMG/M
Ga0103838_1006363	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	558	Open in IMG/M
Ga0103838_1006541	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	553	Open in IMG/M
Ga0103838_1006934	Not Available	542	Open in IMG/M
Ga0103838_1007135	All Organisms → cellular organisms → Eukaryota	537	Open in IMG/M
Ga0103838_1007247	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	534	Open in IMG/M
Ga0103838_1007312	All Organisms → cellular organisms → Eukaryota	532	Open in IMG/M
Ga0103838_1007455	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	528	Open in IMG/M
Ga0103838_1007665	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	523	Open in IMG/M
Ga0103838_1007680	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	523	Open in IMG/M
Ga0103838_1007763	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	521	Open in IMG/M
Ga0103838_1007872	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	518	Open in IMG/M
Ga0103838_1007952	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	516	Open in IMG/M
Ga0103838_1008138	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	512	Open in IMG/M
Ga0103838_1008519	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103838_1000961	Ga0103838_10009611	F027191	KKNEIEKPLLHSINLVRVVRLLISPNKNKMKIEVSKIMKPAFLLGIAFNIAYWQRKYHSGTICKGVSNPLTSKALSGCEREDIPKCT*
Ga0103838_1001012	Ga0103838_10010121	F003009	VYYPLQGKTIFNYFALLSVAFHDIYSVFGFFVFLIVTNQLISGTMLSFSLILEPMIVPMVREEEDVEDLYIDDFF*
Ga0103838_1001122	Ga0103838_10011221	F003081	MFNDTRFGFEVFHMHVRGVDTLMVLSYMHILKKIYLKNYVTAESDG*
Ga0103838_1001386	Ga0103838_10013861	F090441	WELATLSFLDSLAFGALVTRRAIVGCQFPDAVSYRKNDCDTFRSHSGT*
Ga0103838_1001520	Ga0103838_10015201	F011139	MLPAIYNFYNSTNKYVAAIPMQNSLLQTTFFMLFMMSVYCVSSVLPCGRYYYEPEGGYVGNP*
Ga0103838_1001817	Ga0103838_10018171	F000237	SDLTLTVFANVFSLLNNIHKSYYIVFTNKHLNVDQLTRFMVLHYFTPYYLYLVQLHVMFCHESDTDSGENTLEDKSGTYVSFYDAFLKEIQDAWFSQFVFVYFVMHHFHASTVNYHFFERNISELDEIRFYGVAPHYFGPLMGILVISPTHYEGLMMGLFFALLAFLPVIYNLYNSFSKFVCIIPMQNSALQTTLFVVFMMSLYCTASMLPCGRYYYEPEGGYVGNPVKFSYQFVYVYLGILHHLDALDHYFFQFSQSFKRRSKALSSRVLTSRN*
Ga0103838_1001948	Ga0103838_10019481	F030403	EASDDEVWRVDRTAFVSFCKAAAAAEPSQAKREWNGFLSLAFADVDASKTGMIDPDQFDELCEQVARLPRRFGLAPSWEEEYGGSREKRTAARKAMFDAIDSMQGPARGWIGPAQFIHWATEHVAKKTSGNVEAKSASGKMVDFYHVENYDKDAFLKAIKTAISDRKSPEFTRLYEFLLTVFVEEDHACRGVVNREGFERLVNRAAFVPRQFGLAPPTASTERIEELYQGMEDSRLKGITFRKFLDWSVKHLETKVA*
Ga0103838_1001961	Ga0103838_10019611	F002297	DQAWTYEGGREHTANGGFTLTHKITHGENVIQEAERVFDVKANDGSKFEMEHLHKMTMTEESPFYGMVYWYTGRYGKNVERKMTVFFDKINKSILFVPKMKMDTTLTVDGEKISEFVFDNTQAKKHIKFFYSPDAYTKDYLYEEEWEYPGFSGIKCKIDFKRGGVSTYNYDGEYSWVNNANKFEVKSNEKANQEANGPYYGMDYWLVGTYWKSAVVTRTFTYEKKNRNFLLGKLFVENTITLDGEKFSQEKLDTRSTPYTMVWFNQPVRGLFPITRDNT
Ga0103838_1002097	Ga0103838_10020972	F024323	MGLFESIWFLVSSLIIMIVLLVDPKSSLAGSNTNAVVGLFSSPNSGQQFIYNFSAVLILLFFILTIALSLGN*
Ga0103838_1002175	Ga0103838_10021751	F000237	VVSLFNFIHKTYYIIFTNKHLNVDQLTRFMILHYFTPYYLYLVQLHVLFCHEADSDSGENVYEDKSGSYISFYDAMLKEFQDGYTLYVFVYFLHHFTPSTVNYFFFERNIAELDEIRFYAVAPHYFRPLMGLLVVSPSHYEGLMMGLFVLLSALPIIYNWYNSNNNYLPIIPMQSSLLQTSGFILFMLSMYCVSSMLPCGRYYYEPEGGYVGNPVKFSYQYMYLYLG*FIHHLDLIEHYSFQFVQTFVRQCRKAPNS
Ga0103838_1002310	Ga0103838_10023102	F003495	MKENNEKKIKKEDEISKLIKAPPKDTAALDKRSVLAKVNSQGSGR*
Ga0103838_1002331	Ga0103838_10023311	F003081	MSCFFLGLYFVPEPGLVVELREEMFNDTRFGVEVFYMHVRGVDTIMVLSYMHILKKIFLKNYVTAESDG*
Ga0103838_1002668	Ga0103838_10026681	F065388	NGNDHMVFSGAYDKRAATVDAVTEILAGKCCEVECDSAWCAGKDWGVDKNNCQVISTSNTNAQELVCPSGTLMTEVEDGLSGNAHGVQKVASVTCCALDLIAPPTMAPSVAPTTARPTSAPTGAPSTSMPTLAPTSVADCLLGLRDPQDTDSEFLSGIDRCLPGCRSSSRAPTALHRRALESRLLSENNRRQ*
Ga0103838_1002773	Ga0103838_10027732	F034058	NIMVPFSFLSLMGDEIPKEDCAKLLESLADPEDEDGFFPYTPFLDKLCGK*
Ga0103838_1002802	Ga0103838_10028021	F049398	MAPFDEELSDDPEFPPFRTPLKISPNEGLLGGFLLPPGLYELEPPGRPGLYELEPKGLYELELEPPGLYELEPPAGLYELEPPGRYEPEL*
Ga0103838_1002853	Ga0103838_10028531	F001583	LGGYAFFFFHYIIFLGISLSATHLSDLTLTIVANIVSLMNFYYKTYYIIFTNKHLNTDQLVRLMMLHYLTPYYLYLVQLHAMFCHESDTDSGENTIEDKSGAYISFYDAFLKEIQDAYTLFVFVYFTHHFNPSTVNYFFFERNVSEVEEIRFYGVAPHYFRPLMGMLIVCPTHYEGVFLLLYLVLIASLPI
Ga0103838_1002871	Ga0103838_10028711	F000491	EFFGFCALAFGDVDVDKDGFINLEEFDRLLESVAAVPRRYGLAPVSTQSTLERQMAHKKLFDQLDTKAGPARGVLGLDQFVEWAFDHVISKIGKVPAKDVGLYQVQDYTEEEYIGFVERAVNNPGSYEHASFYNFILNCFVEADEQCQGRITYDQFDKLLSRAATVPRHFGLAPPESSTEARKKMFDELELKRGGKGTGYVTARTFWEWTVVHVKGMIELQKAGKGWRENH*
Ga0103838_1003341	Ga0103838_10033411	F005202	KDMMRSNYQNDYDMSEFFNDRMDNYRTNNAMSQFKQMFNSYRSKRQASRRQGPRPAPRQTGDNLDLGDRLVEKLAEQKHHMEAKIGNMTCVMKELNVLDASNNIDVQAMKRDIQKYTMPSEWFKNKYEHLLDTCYEMATNLPADIAENSVVTGDSFGTVKLGEVKMFTKCCEKAKTKLCMHQDIKKKVESNFGPMEDILQETQLTEHEFFPLVMQLLHGKEMDYMTGGM*
Ga0103838_1003387	Ga0103838_10033871	F090442	MLFQLEYESGKSGIRRGIPAKPRKCIGKKQTLTPTNVDQK*
Ga0103838_1003662	Ga0103838_10036621	F009309	LTVTAAVKKLSVVSPGTATGSVTVQSFEWKSVWVSTATSFLSRNSFDTWFDWASFVVAWVESVLVSVGVVVDLGSRQKKSKERVNKLSFDGTSISGAVIGVQGVARVSQVDTSTGTWVVRNFPWNARFTGGFGVQNSALVSVSQSFTESIDFIDWGTFTSSDVIVEVAPASVFIQRVNGVGDVSGESS
Ga0103838_1003725	Ga0103838_10037251	F065401	DRTWEQALAPSKMVVDSVSLNSWLHMWARMCKGAAGIDDFPIWVQLIPRVIFNVICSKEGGLIISRSSLRNFYENFTGLSGDTLEKVSTEGFRSMSANGDYELDWSSYKLLFSNFLLGRTIYGPGKYVFGCFDNSDMTEKYKIDYNG*
Ga0103838_1003772	Ga0103838_10037721	F011139	MGLFLGSLAFLPLIYNVYNSFNKYLATIPMQNSILQTTTFILFMLSLFCANSMLPCGRYYYEPEGGYVGNP*
Ga0103838_1004654	Ga0103838_10046541	F005505	INRKYASFYDAMLKEFQDGYVMYIFIYFALHHFNGATVNYFFFERNIAEMDEIRYYGVAPHYFRPLMGMLIVCPTHYEGVFLLFYLVLIAALPVIYNIYNSYGKYVSAIPMQNSLLQTTTFILFMMSLYCSASILPCGRYYYEPEGGYVGNPIKFSYQYIYLYLAILHHLDVLDHHIYQFSSTFTRRTNSYNLRVST*
Ga0103838_1004849	Ga0103838_10048491	F032526	IKLPKMSDCSEYDAKIESGRVAKYEYDTQASGSKACKGPDAADLTQYVWDYKNDENKDLGLEVGAVVHNREWSYGLIKYASLVQVAVSFKAKCTFSFRDEGATRTLKIVDDTGYTHGELDINIHAGTPCVCAVPRKEKIAVKDKVIRCPQKLSSRKAGNCA*
Ga0103838_1005046	Ga0103838_10050462	F013645	MRIEVNKIMNPAFLLGTAFNIAYWHRKYHSGTICKGVTNPHTSNALSGCDKE*
Ga0103838_1005385	Ga0103838_10053851	F000048	CEALHEKVSTFDKTCLTYAKVLDAANGAAQKMTTHAEADAEVAALRERYAKVKAVSDEWVKKVDILLKEWTLLDNTVTELNSWVAKDKSSEGENQFSLEKMESTLGELKNIFKEKEKLVENL*
Ga0103838_1005470	Ga0103838_10054701	F002556	QGAPRGWIGLEQFVNWATDHLITKVATIDVNADVDYYHIEQYGEHQYLSHLEEAVTNPSSRAHASLYEFLLAIFTECDSRSTGVLTFGEFDTLLSRAAEVPRTFGLAPPEASKEVRKQFFDSMEDKQMGGVTFRTLVAWTTEHARGKIADQKAGKGYKK*
Ga0103838_1005577	Ga0103838_10055771	F090441	SFPDSLALGALITRRVIVGCQFPDAALNRKNDCDTFRFHSGT*
Ga0103838_1006032	Ga0103838_10060321	F001583	IFWSLMNFCYKTYYIIFTNKHLNTDQLTRIMMLHYFMPYYLYLVQLHVMFCHESDTDSGESSLEDKSGTYISFYDGFLKEIQDAFTQFVFVYIMHHFHASTVNYHFFERNISELEEIRFYGVAPHYFRPLMGLLTITPTHYEGLLMGMFGLLAALPLINSFYNSGLSYVPVIPMQSSLV
Ga0103838_1006148	Ga0103838_10061481	F061512	LADYDECKEDIGSMIGNLTCVMTKLDMLDSALQVNLKLWTTDVWQQLDLKKTLAGEDPEWRQKMIGGYTDCYQVASNWPQQSLDRNPITKVFGRHMIFFKCAMKQEKKMCGMAQMYSWLKTLYGDSDDFNWSQFGLPQDKYDRAALTIMVQTQAASKEERFINDFFVNDEL*
Ga0103838_1006363	Ga0103838_10063631	F001583	TNKHLNTDQLTRMMMLHYFTPYYLYLVKLHALFCHESWDTDSGENVFEDKSGSYISFYDAMLKEFQDAYTMFCFIYFFLHHFNGATVNFFFFERNIVEMDDIRFYGVAPHYFRPLMGLLVISPTHYEGLMMGLFGLLAFLPIFYNLYNSFHRYVGAIPMQNSLLQTSLFITFLMSLG
Ga0103838_1006481	Ga0103838_10064811	F000147	FAKRKRVGSWVNAPMFIAAWKKIQEEGLWQDKDWVVKVDVDAVFLPSRLRTYLEKVEVTNNGIYLENCKYVSYGFFGSLEVLSHTAASTYMANLDDCKAALNYMGHEKVTGNQAWGEDLFQQRCMDLHGVDKVQAFDINTDASCAAWRPEGQKKNRKWLPECALTKTPAMHHFKTPKLYFDCLK
Ga0103838_1006541	Ga0103838_10065411	F032157	LERGHVQLLSSRKIFTQMAFMKAMKVKKSKKVSFIAKGPRAKAVVFLGLGSTTKTSSGFKKTDLMKSKTGKIVTKKQHAAGRKAYKHIKGWTTALQQARKDLGVKGFVAIKKGTALYKAAKAIHEA*
Ga0103838_1006544	Ga0103838_10065441	F000048	AEVAGLRERYTKVKATSDTWVKKLEVLVKEWVLLDNTVTELNSWVAKDKSAEGENQFSLEKMESTLGELKNIFKQKEKLVEGL*
Ga0103838_1006894	Ga0103838_10068941	F000048	KGRYEKVKAVSDDWCKKVDTLVKEWKLLDNTVNELNSWVAKDRGAEGEQQYSLEKMESTLGELKNIFKEKEKLVENL*
Ga0103838_1006934	Ga0103838_10069341	F043763	KNKNFKMVATPRSNGKIQKLPTEEWGCDFADEAPEELIVSGREGYNETMNGRYQRGDRLHEGRVFYSHTERKFVIRWCPAKRSWFFDWRGLNTDTTASAALAQDIEHPHLATQAWRVFDGKKWISDAKLALCATIEKKQSEGEHVDFSEINGSEEGTSALTGGVSV*
Ga0103838_1007135	Ga0103838_10071351	F038531	EVCITIALVNGKPQVPFLGLGPGPFHGPGPLPYALGPAVCPEEVCTACEEEGATDLKPILEINCQEGLEDCHASAKDCSANAVDCNEPLKDCTCHIDPQDEGCTKECLIGPGPCLRENAITVGKCVAEHREEIAKCVLEQENTVGKCLNEKRISLAKAEECLACAPGCKKEEK*
Ga0103838_1007247	Ga0103838_10072471	F003081	MPEPGLVIELREEMFNDTRYGAEVFYMHVRGVDSLMLLSYIHILKKIFLKNYVTSESDG*
Ga0103838_1007312	Ga0103838_10073121	F041572	LGIQVSSNVGGFLSVGVLFLGFWAAVIDVVDSFGFFFSEFVGLLSSKSFGVVRLVELSEGGSIDSNDGTFDQSFCSDHFVGGGVVDDIDNPGGSGDSFAGPTEVTVVQPQSSEFHVATHSSDGVNSLWGDLGVRSWSTEFELSLLVHLWFSTTGLSSFVP*
Ga0103838_1007455	Ga0103838_10074552	F003081	MPEPGLVVELREEMFSETRFGAEVFYMHVRGVDSLMLLSYLHIFKKVYLKNYVTSESDG*
Ga0103838_1007639	Ga0103838_10076391	F000147	DYLGKVEVTDNGIYLENCKYVNYGFFGSLAVVSHDAAATYMANIDDCKNTLNYMGHEKDTGNQAWGEDLFQQRCMDLHGVDKVGAYDINTDASCAAWRPEGEKKNRKWVPDCATVQTPGIHHFKKPEAYFKCLKATQGNM*
Ga0103838_1007665	Ga0103838_10076651	F001583	ESDGLLGGYAFFFHYIVALGISLSATHLSDLTLTIIANIFSVFNFAYKTYYIVFTNKHLNTDQLTRLMMFHYFTPYYLYLVKLHALFCHESDSDSGENVYEDKSGTYLSFYDAFLKEIQDAYTLYVFVYFFIHHFDASTVNYHFFERNISELDEIRFYGVAPHY
Ga0103838_1007680	Ga0103838_10076801	F011139	MGLFLGSLAFLPLIYNVYNTFNKYVSTIPMQNSILQTTTFTLFMMSLYCANSMLPCGRYYYEPE
Ga0103838_1007689	Ga0103838_10076891	F000075	NRYDSMNEDDLLVNLESTLSSALSSEARGDSDAAVAKTSAIKNIQKALTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*
Ga0103838_1007763	Ga0103838_10077631	F003081	EPGMVIELREEMFNDTRYGAEVYYMHVRGVDTLMILSYLHILKKIFLKNYVTAESDG*
Ga0103838_1007872	Ga0103838_10078721	F004023	FFDFKGKPYWIFTDKQLNSDTMVRLAYGHYLLAFFMFYLGLIHGIDMHYDKNETSFDGVDAEMAYDEAISNEVSHVMDVLMIVTIVAFVYVEPEALSYEIFMGDIGLVTDVRYYGVAPHYFRPFQAWLIACPHHKTGIFGIIFYMVVLFYQPTLHGTNEFNNFNKK
Ga0103838_1007952	Ga0103838_10079521	F003081	MPEPGLVIELREEMFNDTLFGAEVFYMHVRGVDTIFVLSYLHILKKIYLKNYVTAESDG*
Ga0103838_1008138	Ga0103838_10081381	F005505	MGMLTICPTHYEGLFMGAYMVGLAALPVIYNLYNTMNKHVAAIPMQNSLLQTTAFMLFMMSVYCAASVLPCGRYYYEPEGGYVGSPSIKFSFQYLYVYLYILHHLDVFDQHIFQFSQTYMRKCSSYANRTLF*RKASASKKTRKKSFV
Ga0103838_1008478	Ga0103838_10084781	F000070	LKNDIRQKQQEAFEKIGAVEQQAELRSAEASRRLVALDLRMSGVQGGLGEHKRDILKLREEVNGLTVKSASHEVDIQKNSDAVRKMEKQRNMDEQNWKAQMDAVHDVLDTKVNEKPFEDLKHCVASLTKGTVKFAQVVGVFPGPRFDDAEGLDQSEADVELLGWEECA
Ga0103838_1008519	Ga0103838_10085191	F007792	EQLSKENAGILCASHGGWIVEIPHPPVNYWIKAKLLDLYTPDKQEKAGVPWGNLFWMGAVTEDRHDDHVNGNWWWPHANASVQWFDWGDNEPNDFHGQNCMTYMEYRDVIFQNYRDYFWNDSDCKNDVAHYICVKDCADCPEQGTTPAV*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009340: Microbial communities of water from the North Atlantic ocean - ACM60

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences