Basic Information | |
---|---|
IMG/M Taxon OID | 3300009763 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0114676 | Gp0141794 | Ga0123340 |
Sample Name | Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents | |
---|---|
Total Genome Size | 378933329 |
Sequencing Scaffolds | 98 |
Novel Protein Genes | 106 |
Associated Families | 10 |
Dataset Phylogeny | |
---|---|
Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 17 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida | 5 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae | 6 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae | 6 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Phaseolus → Phaseolus vulgaris | 1 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max | 4 |
Not Available | 54 |
All Organisms → cellular organisms → Eukaryota | 1 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata | 2 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna angularis | 1 |
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna | 1 |
Ecosystem Assignment (GOLD) | |
---|---|
Name | Root Nodule Microbial Communities Of Legume Samples Collected From Usa, Mexico And Botswana |
Type | Host-Associated |
Taxonomy | Host-Associated → Plants → Nodule → Unclassified → Unclassified → Root Nodule → Root Nodule Microbial Communities Of Legume Samples Collected From Usa, Mexico And Botswana |
Alternative Ecosystem Assignments | |
---|---|
Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere |
Location Information | ||||||||
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Location | Mexico: Nepantla | |||||||
Coordinates | Lat. (o) | 19.09098 | Long. (o) | -98.87936 | Alt. (m) | N/A | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F026491 | Metagenome | 197 | Y |
F027116 | Metagenome | 195 | Y |
F051739 | Metagenome | 143 | N |
F056359 | Metagenome | 137 | Y |
F057148 | Metagenome | 136 | Y |
F072021 | Metagenome | 121 | N |
F072022 | Metagenome | 121 | Y |
F082226 | Metagenome | 113 | Y |
F096732 | Metagenome | 104 | Y |
F098773 | Metagenome | 103 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
Ga0123340_1000247 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 31237 | Open in IMG/M |
Ga0123340_1000947 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 22496 | Open in IMG/M |
Ga0123340_1001173 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida | 21063 | Open in IMG/M |
Ga0123340_1001443 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 19739 | Open in IMG/M |
Ga0123340_1001576 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae | 19141 | Open in IMG/M |
Ga0123340_1002192 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae | 17392 | Open in IMG/M |
Ga0123340_1002559 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida | 16517 | Open in IMG/M |
Ga0123340_1002605 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 16412 | Open in IMG/M |
Ga0123340_1002739 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 16109 | Open in IMG/M |
Ga0123340_1003110 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 15393 | Open in IMG/M |
Ga0123340_1003219 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 15220 | Open in IMG/M |
Ga0123340_1003478 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida | 14790 | Open in IMG/M |
Ga0123340_1004185 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Phaseolus → Phaseolus vulgaris | 13637 | Open in IMG/M |
Ga0123340_1004329 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 13453 | Open in IMG/M |
Ga0123340_1004543 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max | 13174 | Open in IMG/M |
Ga0123340_1005072 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 12505 | Open in IMG/M |
Ga0123340_1006306 | Not Available | 11326 | Open in IMG/M |
Ga0123340_1006828 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae | 10885 | Open in IMG/M |
Ga0123340_1007680 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae | 10281 | Open in IMG/M |
Ga0123340_1007907 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae | 10122 | Open in IMG/M |
Ga0123340_1010299 | Not Available | 8670 | Open in IMG/M |
Ga0123340_1012537 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae | 7636 | Open in IMG/M |
Ga0123340_1013613 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 7221 | Open in IMG/M |
Ga0123340_1013800 | Not Available | 7156 | Open in IMG/M |
Ga0123340_1013829 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae | 7148 | Open in IMG/M |
Ga0123340_1013915 | All Organisms → cellular organisms → Eukaryota | 7120 | Open in IMG/M |
Ga0123340_1014546 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 6883 | Open in IMG/M |
Ga0123340_1014615 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata | 6859 | Open in IMG/M |
Ga0123340_1014849 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna angularis | 6768 | Open in IMG/M |
Ga0123340_1016370 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max | 6286 | Open in IMG/M |
Ga0123340_1016423 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida | 6272 | Open in IMG/M |
Ga0123340_1016586 | Not Available | 6218 | Open in IMG/M |
Ga0123340_1017513 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae | 5931 | Open in IMG/M |
Ga0123340_1017930 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max | 5818 | Open in IMG/M |
Ga0123340_1017987 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae | 5800 | Open in IMG/M |
Ga0123340_1018150 | Not Available | 5750 | Open in IMG/M |
Ga0123340_1019500 | Not Available | 5401 | Open in IMG/M |
Ga0123340_1020539 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 5136 | Open in IMG/M |
Ga0123340_1021015 | Not Available | 5023 | Open in IMG/M |
Ga0123340_1021436 | Not Available | 4926 | Open in IMG/M |
Ga0123340_1021633 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 4884 | Open in IMG/M |
Ga0123340_1022617 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 4678 | Open in IMG/M |
Ga0123340_1023566 | Not Available | 4477 | Open in IMG/M |
Ga0123340_1024177 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata | 4363 | Open in IMG/M |
Ga0123340_1024212 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 4357 | Open in IMG/M |
Ga0123340_1025824 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max | 4050 | Open in IMG/M |
Ga0123340_1026983 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 3852 | Open in IMG/M |
Ga0123340_1028150 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida | 3662 | Open in IMG/M |
Ga0123340_1028731 | Not Available | 3566 | Open in IMG/M |
Ga0123340_1029341 | Not Available | 3469 | Open in IMG/M |
Ga0123340_1032059 | Not Available | 3072 | Open in IMG/M |
Ga0123340_1032878 | Not Available | 2970 | Open in IMG/M |
Ga0123340_1032886 | Not Available | 2968 | Open in IMG/M |
Ga0123340_1034998 | Not Available | 2717 | Open in IMG/M |
Ga0123340_1035452 | Not Available | 2667 | Open in IMG/M |
Ga0123340_1035920 | Not Available | 2618 | Open in IMG/M |
Ga0123340_1035947 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae | 2617 | Open in IMG/M |
Ga0123340_1036076 | Not Available | 2605 | Open in IMG/M |
Ga0123340_1037566 | Not Available | 2457 | Open in IMG/M |
Ga0123340_1038388 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta | 2379 | Open in IMG/M |
Ga0123340_1039131 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae | 2305 | Open in IMG/M |
Ga0123340_1039658 | Not Available | 2257 | Open in IMG/M |
Ga0123340_1040541 | Not Available | 2185 | Open in IMG/M |
Ga0123340_1041315 | Not Available | 2121 | Open in IMG/M |
Ga0123340_1041397 | Not Available | 2114 | Open in IMG/M |
Ga0123340_1042498 | Not Available | 2028 | Open in IMG/M |
Ga0123340_1045899 | Not Available | 1791 | Open in IMG/M |
Ga0123340_1046552 | Not Available | 1749 | Open in IMG/M |
Ga0123340_1047983 | Not Available | 1664 | Open in IMG/M |
Ga0123340_1049547 | Not Available | 1575 | Open in IMG/M |
Ga0123340_1050980 | Not Available | 1498 | Open in IMG/M |
Ga0123340_1051840 | Not Available | 1456 | Open in IMG/M |
Ga0123340_1054223 | Not Available | 1350 | Open in IMG/M |
Ga0123340_1057529 | Not Available | 1211 | Open in IMG/M |
Ga0123340_1059406 | Not Available | 1139 | Open in IMG/M |
Ga0123340_1060067 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae | 1117 | Open in IMG/M |
Ga0123340_1060856 | Not Available | 1090 | Open in IMG/M |
Ga0123340_1061341 | Not Available | 1073 | Open in IMG/M |
Ga0123340_1061881 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna | 1058 | Open in IMG/M |
Ga0123340_1062588 | Not Available | 1036 | Open in IMG/M |
Ga0123340_1065337 | Not Available | 958 | Open in IMG/M |
Ga0123340_1066484 | Not Available | 928 | Open in IMG/M |
Ga0123340_1068022 | Not Available | 892 | Open in IMG/M |
Ga0123340_1069378 | Not Available | 860 | Open in IMG/M |
Ga0123340_1069611 | Not Available | 854 | Open in IMG/M |
Ga0123340_1069617 | Not Available | 854 | Open in IMG/M |
Ga0123340_1071869 | Not Available | 805 | Open in IMG/M |
Ga0123340_1072339 | Not Available | 796 | Open in IMG/M |
Ga0123340_1073796 | Not Available | 767 | Open in IMG/M |
Ga0123340_1074765 | Not Available | 749 | Open in IMG/M |
Ga0123340_1076463 | Not Available | 719 | Open in IMG/M |
Ga0123340_1078224 | Not Available | 690 | Open in IMG/M |
Ga0123340_1082232 | Not Available | 631 | Open in IMG/M |
Ga0123340_1086648 | Not Available | 577 | Open in IMG/M |
Ga0123340_1091340 | Not Available | 528 | Open in IMG/M |
Ga0123340_1093226 | Not Available | 510 | Open in IMG/M |
Ga0123340_1093267 | Not Available | 509 | Open in IMG/M |
Ga0123340_1093835 | Not Available | 504 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
---|---|---|---|
Ga0123340_1000247 | Ga0123340_100024713 | F096732 | MEVKHVEALMYKLEEVDETPNDAEAMEVQGRKRARRFMVK* |
Ga0123340_1000947 | Ga0123340_10009479 | F096732 | VQALMEVEHDETLKHRIEEVDETPHDAEAIEMQGMKHVRRLMVK* |
Ga0123340_1001173 | Ga0123340_100117315 | F072022 | MLEEIRITDERMKNSITEERRTHIPHTVSSPSLQHV* |
Ga0123340_1001443 | Ga0123340_10014435 | F057148 | MYTTYQLFKVGKTHRQ*FNMDVGVMNVANHLDVHD* |
Ga0123340_1001576 | Ga0123340_100157629 | F027116 | YNQSSYQIKFWLLNNYKIEVMIEFSNQLSQYNSYLTLATKVLVTYAIRF* |
Ga0123340_1002192 | Ga0123340_100219216 | F057148 | MYTTNQLFKVGKTHKQ*FNIGVGVMNVANHLDVHD* |
Ga0123340_1002192 | Ga0123340_100219217 | F057148 | MYMTNQLFKVGKTNKQ*FNTGVEVMNVANHLDVHD* |
Ga0123340_1002192 | Ga0123340_100219218 | F057148 | MYTTNQLFKTGKTHRQ*FNMGVEVMNVVNHLDVHD* |
Ga0123340_1002192 | Ga0123340_100219219 | F057148 | MYTTNQLFKIGKTHKQLFNMGVGIMNVANHLDVHD* |
Ga0123340_1002192 | Ga0123340_100219220 | F057148 | MYTTNQLFKVGKTHRQ*FNMSVGVMNVANHLDVHD* |
Ga0123340_1002192 | Ga0123340_100219221 | F057148 | MYTTNQLFKVGITHRQ*FNMGVRVMNVANHLNVHD* |
Ga0123340_1002540 | Ga0123340_10025402 | F082226 | MKAHKGLFHNDEELQNGFTQFKTLDALNSKLTINTQYIFFNVLYDVFLFCFFLLLNLKLFLYI* |
Ga0123340_1002559 | Ga0123340_10025591 | F082226 | MKAQKGLLHNGEELHNNFTQPKTLDAFNSRLTINTQYIFLNVLYDVSLSSLLVLSSST* |
Ga0123340_1002605 | Ga0123340_10026051 | F026491 | VANCDQNSHQIKFWLLNNYKIEVMIEFSDQLSQIIDI* |
Ga0123340_1002739 | Ga0123340_100273913 | F082226 | MKAHKGLLHNSEELHNGFKQPKTLYALYSRLIINTQYIFFNVLYDIFLFLFLLVYSST* |
Ga0123340_1003110 | Ga0123340_10031103 | F026491 | MVANCDQNSYQIGFWLLSNYKIEVMIEFSDQLSQDN* |
Ga0123340_1003219 | Ga0123340_100321917 | F098773 | MITNNTVIPFQVSADPEPLEHKSIEDIRKEWATYFTEKKNDNLE* |
Ga0123340_1003478 | Ga0123340_100347812 | F072022 | MLEEIRITDERMKNSITEERRTHIPHIVSSPALQHV* |
Ga0123340_1004185 | Ga0123340_10041851 | F082226 | MKAHKGLLHNGEELHNGFTQPKTLNALYRRLTINTQYIFFNVLYDVFLFLLLVVILQLELAPLYVA |
Ga0123340_1004329 | Ga0123340_10043294 | F098773 | MITTNTIILFQVFIDPNPIELKYIKDIWKEWATYFIEKKNKNLE* |
Ga0123340_1004543 | Ga0123340_10045438 | F072022 | MRITTRMILKEIKIADERMKNSITEEMRTQIPHPISSPALQHV* |
Ga0123340_1005072 | Ga0123340_10050722 | F027116 | MVANCDQNNHQIRLWLLNNYKIKVIIEFCDQLSQDNLYLTLVTMNLVTYTIRF* |
Ga0123340_1006306 | Ga0123340_10063068 | F027116 | MIVNYDQNNHQIRFWWLNNYKIKVMIGFSDQLSQNNLYVRLATKVLATYIIRF* |
Ga0123340_1006828 | Ga0123340_10068288 | F096732 | VQASMEVEHDETLKHQIEEVDETPHDAEAMEMQGRKHARRLMVK* |
Ga0123340_1007680 | Ga0123340_100768013 | F026491 | MVTNCDQNSHQIKFWLLNNYKIEIMSEFSDQLSQIIGI* |
Ga0123340_1007907 | Ga0123340_100790710 | F051739 | MLLVVGFSKGVLEAHSGFCGVSCSAVGSAGVGCRVQCRLAVGKCCKLDRVDQFSEIFTVCKGLDIALLLGEPV* |
Ga0123340_1007907 | Ga0123340_100790711 | F072021 | MSKQMMDEQGYCNTSTSIQTNTKETSKGIEGLVLMIKSVKNSLSQMIAPAAVQ |
Ga0123340_1010299 | Ga0123340_10102994 | F027116 | MVVNCDQNNHQIRFWLLNNYKIKVMIEFSCQLSLDNWYLALATKI* |
Ga0123340_1012537 | Ga0123340_10125377 | F072021 | MSKQMMCKQGYCHTSTSIQTNTKETSKGIEGLVLMIKSAKNSLSQMIAPAGVQENRS* |
Ga0123340_1013613 | Ga0123340_10136135 | F027116 | MVVNCDQNNYQIRFWLLNNYKIKAIIKFSDQLSQDNWYLTLATKVLATYIIRF* |
Ga0123340_1013800 | Ga0123340_10138005 | F051739 | VGFIKGVLEAHSGFCGVSWSAVGSAGVGCRVQCCLAVGKRCKLDQVYQFSEILTVCKGLDVALLLGELV* |
Ga0123340_1013829 | Ga0123340_10138298 | F072022 | MLEEIRITDERMKNSITKERRTHISHTVSSPALQQV* |
Ga0123340_1013915 | Ga0123340_10139151 | F072021 | MKDEHSYCNTSTSIQRMTKVIRKGIEGLVLMIESAKNCLTQMIAPAAVQENSSL* |
Ga0123340_1014546 | Ga0123340_10145462 | F027116 | MIVNCDQNNHQIRFWFLNNYKIKVMIEFSDQLSQDNWYLKLI* |
Ga0123340_1014615 | Ga0123340_10146155 | F027116 | MIANCNQNSHQNEFWLLNNYKIKVIIEFSDQLSQDNWYITLATKI* |
Ga0123340_1014849 | Ga0123340_10148491 | F026491 | MVTNCDQISHKIRFWLLNNYKIEVMIEFSDQLSQIISI* |
Ga0123340_1016370 | Ga0123340_10163707 | F072022 | MMLEEIRIADERMKNSITEKRRTTHIPHIVSSPALQHI* |
Ga0123340_1016423 | Ga0123340_10164231 | F026491 | MVANCDQNSHQIRFWLLNNYKIEVMIEFSDQLSQIIGI* |
Ga0123340_1016586 | Ga0123340_10165861 | F072022 | MMLKEIRITDERMKNSITEKNKTIHIPNDVSSPILQYI* |
Ga0123340_1017513 | Ga0123340_10175131 | F096732 | MEVEHDKTLKHPIEEVDETPHDAEAMEMQGRKCARRLMVK* |
Ga0123340_1017930 | Ga0123340_10179305 | F096732 | MEVKHDETLKHRIEEVNETPHDVKAMEMQGRKYARRLMVK* |
Ga0123340_1017987 | Ga0123340_10179875 | F027116 | MVANYDQNSYQIRFWLLNSSKIEIMIEFSDQLSQDNWYLTLVTKILVIYTIRF* |
Ga0123340_1018150 | Ga0123340_10181502 | F027116 | MVINCDQYSHQIKFLLLNNYKIEVMIELSDQLSQENWFLTLTTKVLVTYVIRF* |
Ga0123340_1019500 | Ga0123340_10195004 | F026491 | LPNEMVANCDQNSHQIKFWLLNNYKIEVMIEFSDQLS* |
Ga0123340_1020539 | Ga0123340_10205391 | F051739 | VGFSKGVLEAHSGFCGVSWSVVGSAGVGCRVQCCLAVGKRCKLDQVDQFSEILTMCKGLDVALLLGELV* |
Ga0123340_1021015 | Ga0123340_10210153 | F096732 | MQASMEVELDETLKHRIEEVDETPHDAEAMEMQGKKHARRLLVK* |
Ga0123340_1021436 | Ga0123340_10214361 | F027116 | PNKMVANCDQNSHQIRF*LLNNYKIKVMIEFSDQLSQDNWYLTLTTKVLVTYIL* |
Ga0123340_1021633 | Ga0123340_10216334 | F096732 | VQASMEVEHDETLKHRIEEVDETPHDVEAMEIQGRKRARRLMMK* |
Ga0123340_1022617 | Ga0123340_10226172 | F096732 | VQASMEVEHDETLKHRIEEVDETPHDAEAIEMQGKKRARRLMVK* |
Ga0123340_1023566 | Ga0123340_10235664 | F026491 | QNSHQIRFWLLNNYKIEVMIEFSDQLSQIIGISH* |
Ga0123340_1024177 | Ga0123340_10241772 | F051739 | VGFSNGVLEAHSGFCGVSCSAVGSAGVGCRVQCRLAVGKCCKLNQVDQFSEILTVCEGLDVALLLGEPI* |
Ga0123340_1024212 | Ga0123340_10242123 | F072022 | MMLEENGITDERMKNSITKEMRTHISHTVSFSALQHV* |
Ga0123340_1025824 | Ga0123340_10258245 | F096732 | MEIEHDETLKHRIEEVDEIPHDAEATEMQGRKRARRLMVNRW* |
Ga0123340_1026983 | Ga0123340_10269831 | F072022 | MMLEEIRIANERMKNSITEERRTHIPHTVSSPALQHV* |
Ga0123340_1028150 | Ga0123340_10281505 | F057148 | MYTTNQLFKVGKTHKQ*FNMGVGVMIVANHFDVHD* |
Ga0123340_1028731 | Ga0123340_10287311 | F027116 | MVVNCDKNSHQIRFWSLNNYKIEVMIEFSDKLSQDN*YLTLSTKVLVTYTIKF* |
Ga0123340_1029341 | Ga0123340_10293414 | F098773 | MITTNTVIPFQVFIDPDPIEHKYIEDIRKEWATYFIKKRNENLE* |
Ga0123340_1032059 | Ga0123340_10320594 | F051739 | VGFSKGVLEAHSGFCGVSCSAVGSAGVGCRVQCRLAVGKCCKLDQVYQFSEILTVCKGLDVARLLGEPV* |
Ga0123340_1032878 | Ga0123340_10328784 | F057148 | MYTTNQLFKVGITHRK*FNKGVEVMNVSNHLDIHD* |
Ga0123340_1032886 | Ga0123340_10328862 | F096732 | MEIEHDEILKHQIEEVDETPHDLEAMEMQGRKCARKLMVK* |
Ga0123340_1034998 | Ga0123340_10349981 | F026491 | ANCDQNSHQIKF*LLNNYKIEVMIEFSDQLSQIIGI* |
Ga0123340_1035452 | Ga0123340_10354521 | F072022 | MMLEEIRITDKRLKNSITEERRTHIPHTVSSPALQQV* |
Ga0123340_1035920 | Ga0123340_10359201 | F027116 | MVANYDQNNHQIRFWLLNNYKIKIMFGFSDQLSQDNLYLTLATKVLATYIIKF* |
Ga0123340_1035947 | Ga0123340_10359471 | F098773 | MITTNTIILFQVFIDPDPIEHKYIEDIQTEWATYFIEKRNEILE* |
Ga0123340_1036076 | Ga0123340_10360761 | F082226 | SKEKTMKAHKGLLHNGEELHNGFTQPKTLDALYSRLTINTQHIFFNVLYDVFLFLLLVVYFLQLEFAPLYVAF* |
Ga0123340_1037566 | Ga0123340_10375661 | F072021 | MSKQMMYEQGYCNTSTSIQTNTKEISKGIEGLVLMIKSTKNSVSQMIAPAAVQENRS* |
Ga0123340_1038388 | Ga0123340_10383884 | F072021 | QGYCNTSTSIQRMTKVIRKGIEGLVLMIKSAKNSLSQMIAPTAVQENNS* |
Ga0123340_1039131 | Ga0123340_10391311 | F096732 | MEVEHDETLKHRIEEVDETPYDSEAMEMQGRKRARRLMVR* |
Ga0123340_1039658 | Ga0123340_10396581 | F026491 | MVANCDQNSQQIKFWLLNNYKIEVMIEFSDQLSQITGI* |
Ga0123340_1040541 | Ga0123340_10405412 | F098773 | MMITTNTIVLFQMFIDADPIEHKYIEDIRTEWATYFIEKRNEIL* |
Ga0123340_1041315 | Ga0123340_10413153 | F072021 | MKDEHSYCNTSTPIQRMTKVIKKGIEGLVLMIKLAKNCLSQMIAPAAVQENSS* |
Ga0123340_1041397 | Ga0123340_10413971 | F056359 | MFSIF*QVLIGEIGKKDYQNNNKIKKTNSKRWNL*RILDFKLYFFEKFYMIFQNSLIKSIIHKIKKHKNL* |
Ga0123340_1042498 | Ga0123340_10424981 | F056359 | MF*MF*QVWIGEIGKRDYQNAKKKTNSKRWNL*RILDFKYLYFIEKYSMIFQKFLIKSLVHKINKHKNL* |
Ga0123340_1045899 | Ga0123340_10458991 | F051739 | VGFSKGVLEAHNGFCSVSCSAVGSAGVGCRVQCRLTVGKCCKLDQVDQFSEILTVCEGLDVALLLGEPV* |
Ga0123340_1046552 | Ga0123340_10465522 | F072021 | MSKQMMDEQGYCNTSTSIQTNTKETSKGIEGLVLMIKSAKNSLSQMIAPAAVQ |
Ga0123340_1046789 | Ga0123340_10467891 | F057148 | MYMTNHLDKVGRIDMQ*FNMGVEIMNVANHLDVHD* |
Ga0123340_1047983 | Ga0123340_10479832 | F072021 | MKEEHSYCNTSTSIQRMTKVIRKSIEGLVLMIESAKNCLSQMIAPAAVQENSS |
Ga0123340_1049547 | Ga0123340_10495471 | F072021 | MSKQMMYEQGYCNTSTSIQRNTKETSKGIEGLVLMIKSAKNSLSQMIAPAAVQENRS* |
Ga0123340_1050980 | Ga0123340_10509802 | F072021 | YCNTSTSIQTNTKETSKGIEGLVLMIKSAKNSLSQMIAPAGVQENRS* |
Ga0123340_1051840 | Ga0123340_10518401 | F072021 | MLKQMMDEQGYCNTSTSIQRMTKVIRKGIKGLVLMIKSANNSLSEMIASAAVQENIS* |
Ga0123340_1054223 | Ga0123340_10542231 | F026491 | MVTNCDQNSHQIRF*LLNNYKIKVMIEFSDQLSEIISI* |
Ga0123340_1057529 | Ga0123340_10575291 | F072021 | MSKQMMCEQGYYNTSTSIQTNTKETSKGIEGLVLMIKSAKNSLSQMIAPAAVQENRS* |
Ga0123340_1059406 | Ga0123340_10594061 | F072021 | KQMMYEQGYCNTSTSIQTNTKETSKGIEGLVLMIKSAKNSLSQMIASAAVQENRS* |
Ga0123340_1060067 | Ga0123340_10600671 | F051739 | GFSKGVLEAHSGFCGVSWSAVGSAGVGCRVQCRLAVGKCCNLDQVDQFSEILTVCEGLDVALLLGEPV* |
Ga0123340_1060856 | Ga0123340_10608563 | F072021 | MSKQMMYEQGYCNTITSIQTNTKETSKCTEGLVLMIKSVKNSLSQMIAPAAVQENRS* |
Ga0123340_1061341 | Ga0123340_10613411 | F027116 | MVANCDQNSHQIKFRLLNNSKIEVIIEFSDQLSQDNWYLILTTKVLVTYTIRF* |
Ga0123340_1061881 | Ga0123340_10618811 | F098773 | MITTNTIIPFQMFIDADPIEHKYIEDIQTEWTTYFIEKRNEIL* |
Ga0123340_1062588 | Ga0123340_10625881 | F056359 | MFRIF*QIRIGEIGKKDYQNAKRRKKTNSKRWNLLRILDFKCLYFSEKHSMIFQNSLIK |
Ga0123340_1065337 | Ga0123340_10653372 | F056359 | MFRIF*QVWIGEIGKNDNQTANKNKKTNCKRWNL*IILDFKCLYFFKKYSMIFQNSLIKSLIHKIKKI |
Ga0123340_1066484 | Ga0123340_10664841 | F051739 | VGFSKGVLEAHSGLCSVSCSAVGSAGVGCRVQCCLVVGKCCKLDQVDQFNEILTTCEGLDVALLLGEPV* |
Ga0123340_1068022 | Ga0123340_10680221 | F056359 | MFRIF*QVWIGEIGKKDYQNAKRRKKKTNSKR*NLLRILDFKCLYFSEKHSMIFQNSLIKSLIHKIKKHKNF* |
Ga0123340_1069378 | Ga0123340_10693781 | F056359 | MFRIF*QVWIGEIGKKDYQNAKRIKKTNSKR*NL*RILDFKCIYFFFVKYSMIFQNSLIK |
Ga0123340_1069611 | Ga0123340_10696111 | F051739 | VGFSKGVLEAHSGFYGVSCSAVWSAGVGCRVQCRLAVGKCCKLDQVDQFSEILTVCEGLDVALLL |
Ga0123340_1069617 | Ga0123340_10696171 | F056359 | MFRIF*QVWIGEIGKKDYQNDKKETNRKRWNL*KILDFKCIYFLEKYSMIFQNSLIKSLFHKIKKNIKISRIC |
Ga0123340_1071869 | Ga0123340_10718691 | F056359 | MFRIL*QLWIREIGKKDYQNAKKTNSKRWNV*RILDFKCLYFLEKYSMIFQNSLIKSLIHKIKKKHTN |
Ga0123340_1072339 | Ga0123340_10723392 | F056359 | MFGIF*QVLIGEIGKKDYQNARKIKKTNSKRWNL*RILDFKCLYLLEKYSMIFQNSLIKSLI |
Ga0123340_1073796 | Ga0123340_10737961 | F056359 | MYRIF*QV*IGEIRKKDYENAKRIKKNSKRWNL*IILDFKCLYFFEKYSMIFQNSSIKS |
Ga0123340_1074765 | Ga0123340_10747651 | F056359 | MFRIF*QVWIGEIGKIDYQNAKRIKKNSKR*NL*RILDFKCLYFFKKHSMIFQNSLIKSLIYKIKKYKFLEFFDKYR* |
Ga0123340_1076463 | Ga0123340_10764631 | F056359 | MFRIF*QVWIGEIGKKVYQNAKNIKNKTNSKRWNL**VLDFKCLYFLEKYSMIFQNSLIKSLIHK |
Ga0123340_1078224 | Ga0123340_10782241 | F056359 | MFRIF*QVWIGEIGKKKAYKTGKKIKKTISKR*NL*TILDFKCLYFLEKYSVIFQNSLIKSLIHKTKKHKNV* |
Ga0123340_1082232 | Ga0123340_10822321 | F056359 | MFRTF*QVWIGDIGKKDYPNAKRIKKNSKR*NL*RILDFKCLYFFKKHSMIFQNSLIKSL |
Ga0123340_1086648 | Ga0123340_10866482 | F027116 | MVTNCDKNNHQTKFLLLNNYKIKIMIEFSEQLSQDNYYLTLTTNVLITYTIRF* |
Ga0123340_1091340 | Ga0123340_10913401 | F056359 | MFKIF*QVWIGEIGKKDYQNAKRIKKINSKRWNL*RILDFKCLYFFEKYSMIFQNSLIKSLIHKIK |
Ga0123340_1093226 | Ga0123340_10932261 | F051739 | VGFSKGVLEAHSGFCGVSCSAVGSAGIGCRVQCRLAVGKCCKLDQVDQFSEILTVCEGLDVALLLGEPV |
Ga0123340_1093267 | Ga0123340_10932671 | F072021 | QMMYEQGYCNTSTSIQTNTKETSKGIEGLVLMIKSAKNSLNQMIAPATVQENRS* |
Ga0123340_1093835 | Ga0123340_10938351 | F026491 | VANCDQNSHQIKFWLLNNYKIEVMIEFSDQLSQIIGI* |
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