Overview | |
---|---|
UHGV ID | UHGV-0198352 |
vOTU ID | vOTU-010513 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SAMN05827160_a1_ct9370_vs1@linear@Podoviridae__sp._ctgOQ1 |
Associated BioSample | SAMN05827160 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 52.93 (Medium-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 11 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9748 |
Virus hallmark genes (geNomad) | 4 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 26.98 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 18,093 |
GC content | 38.67% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 34 |
CDS density | 92% |
Average CDS length (bps) | 491.56 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |