Overview | |
---|---|
UHGV ID | UHGV-0203611 |
vOTU ID | vOTU-015321 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SRS048164_a1_ct31598_vs1@Siphoviridae__sp._ctb2J1 |
Associated BioSample | SAMN00068173 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 86.7 (Medium-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 14 |
CheckV host markers | 6 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9572 |
Virus hallmark genes (geNomad) | 6 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 38.22 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 38,868 |
GC content | 39.37% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 61 |
CDS density | 93% |
Average CDS length (bps) | 590.90 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |