Overview | |
---|---|
UHGV ID | UHGV-0213343 |
vOTU ID | vOTU-106234 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SAMN09781772_a1_ct105166_vs1@Siphoviridae__sp._ctt9X1 |
Associated BioSample | SAMN09781772 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 69.81 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 11 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9804 |
Virus hallmark genes (geNomad) | 9 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - viral or bacterial |
viralVerify score | 6.38 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 26,845 |
GC content | 57.14% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 46 |
CDS density | 93% |
Average CDS length (bps) | 544.04 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |