Overview | |
---|---|
UHGV ID | UHGV-1345888 |
vOTU ID | vOTU-017170 |
Representative Genome? | No |
Source | GVD |
Original genome ID | Minot_Diet_SRR5088936_NODE_49_length_35402_cov_6.068973 |
Associated BioSample | SAMN06117584 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | HMM-based |
CheckV completeness | 25.24 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 3 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9681 |
Virus hallmark genes (geNomad) | 3 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 12.44 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 35,402 |
GC content | 47.52% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 36 |
CDS density | 94% |
Average CDS length (bps) | 927.58 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |