vOTU vOTU-017170

vOTU: vOTU-017170

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017170
Number of genomes	8
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → UBA644 → UBA644 → UBA644 sp900547165
Taxonomy (UHGV)	vFAM-00022 → vOTU-017170
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → UBA644 → UBA644 → UBA644 sp900547165
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2159973
Biosample ID	SAMEA3449211
Genome length (bp)	39,710 bps
CheckV completeness	52.87% (Medium-quality)
CDS count	39
CDS density	92.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → UBA644 → UBA644 → UBA644 sp900547165	Total connections	69	Host agreement	91.3
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → UBA644 → UBA644 → UBA644 sp900547165	Total connections	42	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2159973_1	phrog_87	85.3	4.5e-25	metallo-protease	other
UniRef90	UHGV-2159973_1	UniRef90_A0A2N0ULV1	120.0	7.35e-31	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-2159973_1	445971.ANASTE_00176	90.1	7.16e-20	IrrE N-terminal-like domain	N/A
Pfam	UHGV-2159973_1	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2159973_1	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2159973_1	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-2159973_2	K22300	42.6	0.0000000000094	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2159973_2	phrog_3	43.7	0.0000000000091	transcriptional repressor	transcription regulation
UniRef90	UHGV-2159973_2	UniRef90_UPI0015F3DE1D	121.0	2.09e-32	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2159973_2	411463.EUBVEN_00115	80.1	2.52e-17	Helix-turn-helix domain	N/A
Pfam	UHGV-2159973_2	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2159973_2	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2159973_2	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2159973_3	UniRef90_A0A8J6PHW3	72.8	0.00000000000000149	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2159973_3	1121289.JHVL01000079_gene1187	50.4	0.000000188	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2159973_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-2159973_3	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2159973_7	phrog_5781	99.0	4.8e-29	N/A	unknown function
UniRef90	UHGV-2159973_7	UniRef90_A0A2V2FSM6	103.0	1.93e-26	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-2159973_7	2342.SOPEG_2218	90.5	3.4e-22	N/A	N/A
Pfam	UHGV-2159973_7	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-2159973_7	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-2159973_7	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2159973_9	phrog_111	156.7	0	DNA methyltransferase	other
UniRef90	UHGV-2159973_9	UniRef90_A0A316S635	219.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-2159973_9	411468.CLOSCI_00567	196.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-2159973_9	oMTase_00015	200.2	0	orphan methyltransferase	RM
Pfam	UHGV-2159973_9	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-2159973_9	PF05869,TIGR01712,COG0338	N/A	N/A	N/A	N/A
NCBIFam	UHGV-2159973_10	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
eggNOG-mapper	UHGV-2159973_11	476272.RUMHYD_03348	50.4	0.00000537	N/A	N/A
structural_annotation	UHGV-2159973_11	PF18300,MF_01549,NF007981	N/A	N/A	N/A	N/A
KOfam	UHGV-2159973_14	K03111	94.0	2.5e-27	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2159973_14	phrog_44	106.5	2.9e-31	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2159973_14	UniRef90_A0A350IHS4	110.0	2.18e-28	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2159973_14	1278306.KB906914_gene1072	101.0	1.57e-25	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2159973_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2159973_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2159973_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2159973_14	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2159973_14	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2159973_16	500632.CLONEX_00691	55.5	0.000000463	Replication initiator protein A	N/A
PHROG	UHGV-2159973_17	phrog_3584	122.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2159973_17	UniRef90_R6RCC6	195.0	0	Gp31	N/A
eggNOG-mapper	UHGV-2159973_17	1414720.CBYM010000002_gene589	114.0	3.31e-27	N/A	N/A
structural_annotation	UHGV-2159973_17	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-2159973_18	phrog_824	133.0	1.1e-39	N/A	unknown function
UniRef90	UHGV-2159973_18	UniRef90_A0A3B8VJR3	137.0	1.24e-39	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-2159973_18	97139.C824_00735	130.0	3.67e-37	VRR-NUC domain	N/A
Pfam	UHGV-2159973_18	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-2159973_18	PF08774	N/A	N/A	N/A	N/A
Pfam	UHGV-2159973_20	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2159973_20	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-2159973_24	K06909	257.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2159973_24	phrog_3717	213.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-2159973_24	UniRef90_UPI00082C9116	595.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2159973_24	445971.ANASTE_00711	516.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2159973_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-2159973_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2159973_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2159973_24	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2159973_25	phrog_156	199.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-2159973_25	693746.OBV_23930	352.0	0	N/A	N/A
structural_annotation	UHGV-2159973_25	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-2159973_26	phrog_35275	40.6	0.000000000033	N/A	unknown function
Pfam	UHGV-2159973_27	PF09956	N/A	N/A	N/A	DUF2190
PHROG	UHGV-2159973_28	phrog_371	142.7	2.49992e-42	major head protein	head and packaging
UniRef90	UHGV-2159973_28	UniRef90_UPI00164C0E21	306.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-2159973_28	1226322.HMPREF1545_03848	337.0	0	N/A	N/A
Pfam	UHGV-2159973_28	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-2159973_28	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2159973_29	1232449.BAHV02000016_gene1817	53.9	0.00000755	N/A	N/A
structural_annotation	UHGV-2159973_29	PF20387,NF038128,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2159973_30	445971.ANASTE_00721	92.0	2.05e-16	N/A	N/A
PHROG	UHGV-2159973_32	phrog_22978	71.1	4.3e-37	N/A	unknown function
eggNOG-mapper	UHGV-2159973_32	1226322.HMPREF1545_00787	92.4	0.00000000000000417	N/A	N/A
KOfam	UHGV-2159973_33	K10804	99.1	2.9e-29	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-2159973_33	phrog_14008	50.3	0.000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-2159973_33	536233.CLO_1374	123.0	1.24e-25	GDSL-like Lipase/Acylhydrolase family	N/A
Pfam	UHGV-2159973_33	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
PHROG	UHGV-2159973_36	phrog_443	61.0	3.2e-17	holin	lysis
UniRef90	UHGV-2159973_36	UniRef90_UPI0009B98E42	94.0	6.61e-24	holin	N/A
eggNOG-mapper	UHGV-2159973_36	1469948.JPNB01000002_gene3855	87.8	2.9e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-2159973_36	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-2159973_36	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-2159973_37	phrog_9066	41.8	0.0000000000083	endolysin	lysis
UniRef90	UHGV-2159973_37	UniRef90_R7ID00	158.0	5.49309e-43	SH3 domain protein	N/A
eggNOG-mapper	UHGV-2159973_37	428127.EUBDOL_01569	100.0	4.33e-22	N/A	N/A
structural_annotation	UHGV-2159973_37	PF01551,PF08460,NF040883,COG0739,COG4991	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2159973_39	1291050.JAGE01000001_gene991	170.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2159973	Yes	39,710	47	53	1
UHGV-1844352	No	28,938	48	67	1
UHGV-0002712	No	24,273	50	56	1
UHGV-0012084	No	24,273	50	56	1
UHGV-2104555	No	34,014	48	47	1
UHGV-1572504	No	19,362	50	45	1
UHGV-1345888	No	35,402	48	25	1
UHGV-1734629	No	14,753	51	20	1