Overview | |
---|---|
UHGV ID | UHGV-2104555 |
vOTU ID | vOTU-017170 |
Representative Genome? | No |
Source | IMGVR4 |
Original genome ID | 3300029573|Ga0245101_100086|provirus_2_44617 |
Associated BioSample | SAMEA3449153 |
Viral genome confidence | Uncertain |
Quality assessment | |
---|---|
CheckV method | HMM-based |
CheckV completeness | 46.88 (Low-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 4 |
CheckV host markers | 5 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9476 |
Virus hallmark genes (geNomad) | 4 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 10.23 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 34,014 |
GC content | 48.14% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 30 |
CDS density | 94% |
Average CDS length (bps) | 1,064.00 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |