UHGV-1506850 (vOTU-137489)

Viral Genome: UHGV-1506850

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1506850
vOTU ID	vOTU-137489
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0103735
Associated BioSample	SAMEA3951798
Viral genome confidence	Confident

Quality assessment
CheckV method	HMM-based
CheckV completeness	55.27 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9682
Virus hallmark genes (geNomad)	0
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	2.19
Jumbo phage	No

Genome content
Genome length (bp)	15,909
GC content	41.84%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	19
CDS density	96%
Average CDS length (bps)	807.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1506850_2	K03111	100.7	2.5e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1506850_2	phrog_44	104.2	1.4e-30	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506850_2	UniRef90_A0A373B679	99.4	6.73e-24	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1506850_2	397290.C810_04698	89.0	1.2e-20	Single-strand binding protein family	N/A
Pfam	UHGV-1506850_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1506850_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1506850_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1506850_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1506850_2	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1506850_3	phrog_2150	82.9	3e-24	terminase	head and packaging
structural_annotation	UHGV-1506850_5	PF13604,MF_01488,TIGR01448,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-1506850_7	phrog_38078	42.2	0.0000000000083	N/A	unknown function
Pfam	UHGV-1506850_7	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1506850_7	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1506850_9	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-1506850_10	phrog_2038	55.4	3.3e-16	upper collar connector	connector
PHROG	UHGV-1506850_14	phrog_4898	41.5	0.00000000002	holin	lysis
PHROG	UHGV-1506850_16	phrog_2006	114.1	1.2e-34	major head protein	head and packaging
UniRef90	UHGV-1506850_16	UniRef90_A0A843GM45	73.2	0.000000000243	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506850_16	10756.CAPSD_BPPH2	101.0	2.28e-20	viral capsid	N/A
structural_annotation	UHGV-1506850_16	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506850_18	742733.HMPREF9469_02856	58.9	0.000000447	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
COG	UHGV-1506850_18	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A

Viral Genome: UHGV-1506850

Genome Information

Genome content

Genome View (Completeness: 55.27)

Functional Annotation