vOTU vOTU-137489

vOTU: vOTU-137489

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-137489
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vOTU-137489
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1506850
Biosample ID	SAMEA3951798
Genome length (bp)	15,909 bps
CheckV completeness	55.27% (Medium-quality)
CDS count	19
CDS density	96.40%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas	Total connections	15	Host agreement	93.33
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.27)

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1506850_2	K03111	100.7	2.5e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1506850_2	phrog_44	104.2	1.4e-30	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506850_2	UniRef90_A0A373B679	99.4	6.73e-24	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1506850_2	397290.C810_04698	89.0	1.2e-20	Single-strand binding protein family	N/A
Pfam	UHGV-1506850_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1506850_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1506850_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1506850_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1506850_2	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1506850_3	phrog_2150	82.9	3e-24	terminase	head and packaging
structural_annotation	UHGV-1506850_5	PF13604,MF_01488,TIGR01448,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-1506850_7	phrog_38078	42.2	0.0000000000083	N/A	unknown function
Pfam	UHGV-1506850_7	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1506850_7	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1506850_9	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-1506850_10	phrog_2038	55.4	3.3e-16	upper collar connector	connector
PHROG	UHGV-1506850_14	phrog_4898	41.5	0.00000000002	holin	lysis
PHROG	UHGV-1506850_16	phrog_2006	114.1	1.2e-34	major head protein	head and packaging
UniRef90	UHGV-1506850_16	UniRef90_A0A843GM45	73.2	0.000000000243	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506850_16	10756.CAPSD_BPPH2	101.0	2.28e-20	viral capsid	N/A
structural_annotation	UHGV-1506850_16	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506850_18	742733.HMPREF9469_02856	58.9	0.000000447	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
COG	UHGV-1506850_18	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1506850	Yes	15,909	42	55	1