Overview | |
---|---|
UHGV ID | UHGV-1921440 |
vOTU ID | vOTU-085323 |
Representative Genome? | No |
Source | IMGVR4 |
Original genome ID | 3300007296|Ga0104830_100702|provirus_14337_33677 |
Associated BioSample | N/A |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | HMM-based |
CheckV completeness | 38.78 (Low-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 7 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9499 |
Virus hallmark genes (geNomad) | 4 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 18.12 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 16,921 |
GC content | 41.22% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 26 |
CDS density | 92% |
Average CDS length (bps) | 597.81 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |