vOTU vOTU-085323

vOTU: vOTU-085323

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-085323
Number of genomes	12
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans
Taxonomy (UHGV)	vFAM-00003 → vOTU-085323
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2073900
Biosample ID	N/A
Genome length (bp)	36,491 bps
CheckV completeness	89.62% (Medium-quality)
CDS count	48
CDS density	92.09%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans	Total connections	6	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans	Total connections	37	Host agreement	89.19

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-2073900_1	500632.CLONEX_03740	65.5	0.000000000000663	N/A	N/A
Pfam	UHGV-2073900_1	PF20197	N/A	N/A	N/A	DUF6560
KOfam	UHGV-2073900_2	K24473	60.3	3.1e-25	TENM, ODZ; teneurin	N/A
UniRef90	UHGV-2073900_2	UniRef90_A0A3A6FL41	1093.0	0	RHS repeat protein	N/A
eggNOG-mapper	UHGV-2073900_2	500632.CLONEX_03741	1088.0	0	RHS repeat-associated core domain	N/A
Pfam	UHGV-2073900_2	PF05593	N/A	N/A	RHS Repeat	RHS_repeat
NCBIFam	UHGV-2073900_2	TIGR01643.1	N/A	N/A	YD repeat-containing protein	N/A
COG	UHGV-2073900_2	COG3209	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2073900_3	397291.C804_06247	99.8	4.59e-22	N/A	N/A
NCBIFam	UHGV-2073900_4	NF040910.1	N/A	N/A	CD1375 family protein	N/A
eggNOG-mapper	UHGV-2073900_7	1120998.AUFC01000030_gene2248	70.1	0.000000000775	N/A	N/A
eggNOG-mapper	UHGV-2073900_8	1235800.C819_00473	84.0	1.24e-17	N/A	N/A
PHROG	UHGV-2073900_9	phrog_13879	228.2	0	N/A	unknown function
eggNOG-mapper	UHGV-2073900_9	1235800.C819_00474	456.0	0	N/A	N/A
structural_annotation	UHGV-2073900_9	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_10	phrog_1194	73.2	3.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-2073900_10	1122919.KB905559_gene1345	66.2	0.00000000000198	N/A	N/A
Pfam	UHGV-2073900_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2073900_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-2073900_11	K10421	42.0	0.000000000005	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-2073900_11	phrog_1535	410.9	0	tail length tape measure protein	tail
UniRef90	UHGV-2073900_11	UniRef90_A0A4U9RES2	212.0	0	TMP repeat family	N/A
eggNOG-mapper	UHGV-2073900_11	1432847.V5USK5_9VIRU	235.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
eggNOG-mapper	UHGV-2073900_12	1235800.C819_00477	56.6	0.0000000381	N/A	N/A
UniRef90	UHGV-2073900_13	UniRef90_UPI000487273D	97.1	7.79e-23	N/A	N/A
eggNOG-mapper	UHGV-2073900_13	1235800.C819_00478	100.0	1.01e-24	N/A	N/A
Pfam	UHGV-2073900_13	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-2073900_13	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_14	phrog_158	56.3	7.1e-16	major tail protein	tail
UniRef90	UHGV-2073900_14	UniRef90_UPI001177F8F3	142.0	7.66006e-41	phage tail protein	N/A
eggNOG-mapper	UHGV-2073900_14	1235800.C819_00479	107.0	3.54e-28	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-2073900_14	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_15	phrog_78	44.6	0.0000000000025	tail terminator	connector
eggNOG-mapper	UHGV-2073900_15	1294142.CINTURNW_1695	101.0	4.05e-26	N/A	N/A
structural_annotation	UHGV-2073900_15	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_16	phrog_5	86.1	4.7e-25	tail completion or Neck1 protein	connector
UniRef90	UHGV-2073900_16	UniRef90_UPI0008369623	143.0	1.02001e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2073900_16	1280689.AUJC01000003_gene970	123.0	9.74e-34	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2073900_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-2073900_16	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-2073900_16	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_17	phrog_2168	52.5	0.000000000000004	N/A	unknown function
eggNOG-mapper	UHGV-2073900_17	1280689.AUJC01000003_gene969	83.6	2.92e-19	N/A	N/A
structural_annotation	UHGV-2073900_17	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-2073900_18	UniRef90_UPI000829FFA7	70.9	0.0000000000000818	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-2073900_18	1280689.AUJC01000003_gene968	69.7	0.0000000000000389	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-2073900_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_20	phrog_10	178.1	0	major head protein	head and packaging
UniRef90	UHGV-2073900_20	UniRef90_UPI0018A03EFB	394.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-2073900_20	1123250.KB908414_gene2105	350.0	0	Phage capsid family	N/A
Pfam	UHGV-2073900_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2073900_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2073900_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2073900_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_21	phrog_172	84.8	1.6e-24	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-2073900_21	1280689.AUJC01000003_gene966	88.6	1.11e-18	N/A	N/A
Pfam	UHGV-2073900_21	PF14265	N/A	N/A	N/A	DUF4355
PHROG	UHGV-2073900_23	phrog_115	304.8	0	minor head protein	head and packaging
UniRef90	UHGV-2073900_23	UniRef90_A0A386PHU4	326.0	0	Phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-2073900_23	1280692.AUJL01000025_gene2082	297.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-2073900_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-2073900_23	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-2073900_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2073900_23	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_24	phrog_64	360.4	0	portal protein	head and packaging
UniRef90	UHGV-2073900_24	UniRef90_UPI00115A1F99	513.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-2073900_24	1280689.AUJC01000003_gene963	518.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2073900_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-2073900_24	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-2073900_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_25	phrog_38	250.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-2073900_25	UniRef90_UPI001494C176	461.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2073900_25	796940.HMPREF9628_01310	411.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-2073900_25	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-2073900_25	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2073900_25	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_27	phrog_426	79.2	8.5e-23	terminase small subunit	head and packaging
UniRef90	UHGV-2073900_27	UniRef90_A0A3A9BC41	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-2073900_27	1121422.AUMW01000009_gene3235	98.6	2.21e-23	N/A	N/A
Pfam	UHGV-2073900_27	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-2073900_27	PF11985	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2073900_28	696281.Desru_1765	54.7	0.0000000244	N/A	N/A
structural_annotation	UHGV-2073900_28	PF10007,MF_01909,TIGR02719,COG3355	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2073900_29	645991.Sgly_0533	50.8	0.000000836	N/A	N/A
structural_annotation	UHGV-2073900_29	PF10007,MF_01819,TIGR02337,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_31	phrog_36209	42.2	0.000000000015	holin	lysis
eggNOG-mapper	UHGV-2073900_31	293826.Amet_0410	65.9	0.0000000000428	N/A	N/A
PHROG	UHGV-2073900_32	phrog_532	64.0	2.2e-18	late transcriptional activator	transcription regulation
UniRef90	UHGV-2073900_32	UniRef90_A0A358PS65	124.0	1.45e-34	Mor domain-containing protein	N/A
eggNOG-mapper	UHGV-2073900_32	665956.HMPREF1032_04096	70.5	0.0000000000000344	Mor transcription activator family	N/A
Pfam	UHGV-2073900_32	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-2073900_32	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-2073900_32	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
KOfam	UHGV-2073900_33	K07273	166.0	0	acm; lysozyme	N/A
PHROG	UHGV-2073900_33	phrog_291	134.2	1.2e-39	endolysin	lysis
UniRef90	UHGV-2073900_33	UniRef90_A0A174WTG1	342.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2073900_33	658086.HMPREF0994_03328	206.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-2073900_33	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-2073900_33	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2073900_33	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2073900_33	PF01183,PF01471,MF_02227,NF007360,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_34	phrog_286	94.2	1.6e-27	N/A	unknown function
UniRef90	UHGV-2073900_34	UniRef90_A0A358PS55	121.0	6.69e-33	GemA protein	N/A
eggNOG-mapper	UHGV-2073900_34	1121422.AUMW01000009_gene3230	92.0	5.06e-22	N/A	N/A
Pfam	UHGV-2073900_34	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
COG	UHGV-2073900_34	COG4382	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2073900_34	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_35	phrog_491	105.2	5.6e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2073900_35	UniRef90_UPI000509D47F	142.0	2.13e-40	host-nuclease inhibitor Gam family protein	N/A
eggNOG-mapper	UHGV-2073900_35	1499689.CCNN01000007_gene1840	142.0	3.56995e-41	bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-2073900_35	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
COG	UHGV-2073900_35	COG4396	N/A	N/A	Mu-like prophage host-nuclease inhibitor protein Gam	N/A
structural_annotation	UHGV-2073900_35	PF07352,COG4396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2073900_36	UniRef90_UPI001C01D3C5	395.0	0	N/A	N/A
eggNOG-mapper	UHGV-2073900_36	622312.ROSEINA2194_04464	411.0	0	N/A	N/A
Pfam	UHGV-2073900_36	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-2073900_36	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2073900_38	1122925.KB895376_gene410	68.2	0.000000000000321	N/A	N/A
KOfam	UHGV-2073900_39	K07132	118.2	7.7e-35	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-2073900_39	phrog_296	168.7	0	DNA transposition protein	integration and excision
UniRef90	UHGV-2073900_39	UniRef90_A0A358PSJ0	398.0	0	ATPase	N/A
eggNOG-mapper	UHGV-2073900_39	97138.C820_01969	302.0	0	N/A	N/A
Pfam	UHGV-2073900_39	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-2073900_39	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-2073900_39	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
KOfam	UHGV-2073900_40	K07497	57.2	3.5e-16	K07497; putative transposase	N/A
PHROG	UHGV-2073900_40	phrog_310	374.5	0	transposase	integration and excision
UniRef90	UHGV-2073900_40	UniRef90_A0A358PS57	753.0	0	MerR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2073900_40	97138.C820_01968	555.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-2073900_40	TnsB_0_V-K	55.2	0.000000000000001	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-2073900_40	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-2073900_40	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-2073900_40	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-2073900_40	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-2073900_40	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_42	phrog_26861	63.3	1.8e-18	N/A	unknown function
UniRef90	UHGV-2073900_42	UniRef90_A0A1Q6KA67	125.0	3.24e-32	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2073900_42	1347392.CCEZ01000074_gene1860	115.0	5.79e-29	PFAM single-strand binding protein	N/A
Pfam	UHGV-2073900_42	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-2073900_42	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2073900_42	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2073900_44	phrog_1468	70.9	9.7e-21	transcriptional repressor	transcription regulation
UniRef90	UHGV-2073900_44	UniRef90_F3AV44	112.0	2.74e-31	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2073900_44	665950.HMPREF1025_01598	112.0	4.59e-32	Helix-turn-helix	N/A
Pfam	UHGV-2073900_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2073900_44	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-2073900_44	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2073900_45	K22300	84.6	1.7e-24	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2073900_45	phrog_4836	43.9	0.0000000000029	CII-like regulator	transcription regulation
UniRef90	UHGV-2073900_45	UniRef90_UPI001C01EE0D	130.0	3.65e-36	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2073900_45	665950.HMPREF1025_01604	89.4	6.69e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2073900_45	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-2073900_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2073900_45	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2073900_46	K22300	54.1	0.0000000000000034	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2073900_46	phrog_8	48.6	0.00000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-2073900_46	UniRef90_A0A416HFA5	84.7	4.29e-18	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2073900_46	665950.HMPREF1025_01604	55.8	0.0000000786	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2073900_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2073900_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2073900_46	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2073900_47	K22300	62.2	1.1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2073900_47	phrog_8	44.4	0.0000000000036	transcriptional regulator	transcription regulation
UniRef90	UHGV-2073900_47	UniRef90_UPI001C01EE0D	99.4	1.44e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2073900_47	1209989.TepiRe1_2000	74.3	0.00000000000000132	Helix-turn-helix domain	N/A
Pfam	UHGV-2073900_47	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-2073900_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-2073900_48	1410650.JHWL01000004_gene1799	116.0	3.68e-26	RHS Repeat	N/A
NCBIFam	UHGV-2073900_48	TIGR03696.1	N/A	N/A	RHS repeat-associated core domain-containing protein	N/A
COG	UHGV-2073900_48	COG3209	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2073900	Yes	36,491	39	90	1
UHGV-0047262	No	51,357	38	100	1
UHGV-0062994	No	31,937	39	78	1
UHGV-0204225	No	31,616	39	78	1
UHGV-2098679	No	30,225	39	74	1
UHGV-1333289	No	25,647	40	59	1
UHGV-1588709	No	18,087	37	46	1
UHGV-1919596	No	18,613	39	46	1
UHGV-1681915	No	17,571	38	43	1
UHGV-2124981	No	16,354	37	42	1
UHGV-1738209	No	15,300	38	39	1
UHGV-1921440	No	16,921	41	39	1