| Organism information | |
|---|---|
| Name | Micromonas commoda |
| Taxonomy ID | 296587 View in NCBI |
| Taxonomic Group | Eukaryota (Plants) |
| Genome details | |
|---|---|
| Assembly Accession | GCA_000090985.2 View in NCBI |
| Assembly Name | ASM9098v2 |
| Sequencing Level | Complete Genome (haploid) |
| Source Database | GENBANK |
| Available G-quadruplexes | |||||
|---|---|---|---|---|---|
| Total | 83,927 | By regular expression | 13,117 | By G4Hunter | 70,810 |
| Chromosome/Contig Name | Start | End | Length | Sequence |
|---|---|---|---|---|
| CP001323.1 | 510,226 | 510,270 | 44 | CCCCGCCCGCGCCCCCCCCCACGTCCTCCCCCACGTCCCCCCCC |
| CP001335.1 | 196,084 | 196,128 | 44 | GGGGGGGGGGGAGATCTGGGCATCTGGGGGGGGGGGGCTCTGGG |
| CP001325.1 | 1,400,807 | 1,400,850 | 43 | CCCCCGTCGGCACCCCCGTCGGCACCCCCCGCGCTTCCCCCCC |
| CP001328.1 | 217,466 | 217,508 | 42 | CCCCCCTGGGCACCCCCCTGGGCACCCCCCTGGGCACCCCCC |
| CP001333.1 | 159,124 | 159,166 | 42 | CCCCCCTCGGCACCCCCCTCGGCACCCCCCTCGGCACCCCCC |
| CP001327.1 | 985,747 | 985,789 | 42 | CCCCCCCCTCCTCCCCCCCCTCTCCTCCCCATCCCGCCCCCC |
| CP001323.1 | 1,882,071 | 1,882,113 | 42 | GGGGGGTGCCGAAGGGGGTGCCGAAGGGGGTGCCGAAGGGGG |
| CP001327.1 | 1,043,463 | 1,043,505 | 42 | GGGGGGGGTAGACTCGGGGGTGCCGAGGGGGGTGCCGAGGGG |
| CP001324.1 | 225,522 | 225,564 | 42 | CCCCCCTCGGCACCCCCCTCGGCACCCCCCTCGGCAACCCCC |
| CP001329.1 | 1,042,841 | 1,042,883 | 42 | CCCCCCTCGGCACCCCCCTCGGCACCCCCCTCGGCAACCCCC |
| CP001323.1 | 103,244 | 103,286 | 42 | CCCCCCTCGTCACCCCCCTCGGCACCCCCCTCGGCACCCCCC |
| CP001574.1 | 86,945 | 86,986 | 41 | CCCCCGTCGGCACCCCCGTCGGCACCCCCGTCGGCACCCCC |
| CP001577.1 | 305,499 | 305,540 | 41 | GGGGGCGGTCCAGGGGGCGGCCCAGGGGGCGGCCCGGGGGG |
| CP001327.1 | 1,100,021 | 1,100,062 | 41 | GGGGGTGCCGACGGGGGTGCCGACGGGGGTGCCGACGGGGG |
| CP001327.1 | 1,142,474 | 1,142,515 | 41 | GGGGATGCCGAGGGGGATGCCGAGGGGGGTGCCGAGGGGGG |
| CP001577.1 | 509,260 | 509,301 | 41 | CCCGCAGATACCCCCCCCGCTCGCTCCCCCTCCCGCGCCCC |
| CP001327.1 | 1,208,934 | 1,208,975 | 41 | CCCCCCTCGGCACCCCCCTCGGCACCCCCCTCGGCACCCCC |
| CP001323.1 | 1,221,273 | 1,221,314 | 41 | CCCCCGAAGGCACCCCCGAAGGCACCCCCGAAGGCACCCCC |
| CP001330.1 | 215,286 | 215,327 | 41 | CCCCCTCGGCAACCCCCTCGGCAACCCCCTCGGCAACCCCC |
| CP001576.1 | 157,089 | 157,130 | 41 | CCCCCGACGGCACCCCCGACGGCACCCCCGACGGCACCCCC |
| CP001327.1 | 456,270 | 456,311 | 41 | CCCCCGACGGCACCCCCGACGGCACCCCCGACGGCACCCCC |
| CP001333.1 | 520,153 | 520,194 | 41 | CCCCCGAAGGCACCCCCGAAGGCACCCCCGAAGGCACCCCC |
| CP001574.1 | 1,913,620 | 1,913,661 | 41 | CCCCCCTCGGCACCCCCTTCGGCACCCCCTTCGGCACCCCC |
| CP001327.1 | 648,527 | 648,568 | 41 | GGGGGTCTCGGTGGGGGTCTCGGCGGGGGCCTGGGCGGGGG |
| CP001323.1 | 728,891 | 728,932 | 41 | CCCCCGCGTCCACCCCCGCGTCCACCCCCGCGTCCACCCCC |
| CP001575.1 | 1,026,826 | 1,026,867 | 41 | CCCCCGGCGGCACCCCCTCGGCACCCCCCTCGGCACCCCCC |
| CP001574.1 | 113,854 | 113,894 | 40 | GGGCGCCGCGGGGCGCGGGGGGGGTTGGCCGGGGGGGGGG |
| CP001330.1 | 91,370 | 91,410 | 40 | CCCCCTTTGACGCCCCCTTTGACGCCCCCTTTGACGCCCC |
| CP001333.1 | 424,144 | 424,184 | 40 | GGGGAGCGAGGGGGGAGGTATTGGGGGGGGGGCGGGAGGG |
| CP001330.1 | 236,777 | 236,817 | 40 | CCCCCTCGACCGCCCCCCCTACCCCCGCCCCGCCCCCCCC |
| CP001326.1 | 1,136,044 | 1,136,084 | 40 | GGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGG |
| CP001331.1 | 60,161 | 60,201 | 40 | CCCCGTGGGCACCCCCGTGGGCACCCCCGTGGGCACCCCC |
| CP001325.1 | 1,254,805 | 1,254,845 | 40 | CCCGTTTCCCGCGCCCCCCCCCCTGCTCAACCCCCCCCCC |
| CP001323.1 | 980,391 | 980,431 | 40 | GGGGTGCCGAGGGGGGTGCCGAGGGGGGTGCCGAGGGGGG |
| CP001574.1 | 64,711 | 64,750 | 39 | CCCCCGTGGGCACCCCCGTGGGCACCCCCGTGGGCACCC |
| CP001324.1 | 579,529 | 579,568 | 39 | CCCCCGTCGGCACCCCCGTCGGCACCCCCATCGGCACCC |
| CP001328.1 | 248,503 | 248,542 | 39 | CCCCCCTCGGCACCCCCCTCGGCACCCCCCTCGGGACCC |
| CP001333.1 | 389,698 | 389,737 | 39 | GGGAGCCGAGGGGGGTGCCGAGGGGGGTGCCGAAGGGGG |
| CP001574.1 | 215,740 | 215,779 | 39 | GGGTGCCGAGGGGGGTGCCGAGGGGGGTGCCGAGGGGGG |
| CP001332.1 | 450,597 | 450,636 | 39 | GGGGACGGGTCGGGGGAGGACCCGGGGGCGATCGCGGGG |
| CP001577.1 | 597,598 | 597,637 | 39 | CCCGTCGGTACCCCCGTCGGCACCCCCGTCGGCACCCCC |
| CP001331.1 | 856,459 | 856,498 | 39 | CCCGTCGGCACCCCCGTCGGCACCCCCGTCGGCACCCCC |
| CP001331.1 | 865,202 | 865,241 | 39 | CCCCCGTCGGCACCCCCGTCGGCACCCCCGTCGGCACCC |
| CP001326.1 | 1,233,813 | 1,233,852 | 39 | CCCAACCTCGCCCCCGACCTCGCCCCCGACCTCGCCCCC |
| CP001325.1 | 1,249,775 | 1,249,814 | 39 | GGGGGGGGTCAGGACGGGGGTTGGTGGGACGAGGGGGGG |
| CP001326.1 | 1,258,917 | 1,258,956 | 39 | CCCGTCGGCACCCCCGTCGGCACCCCCGTCGGCACCCCC |
| CP001575.1 | 830,152 | 830,191 | 39 | CCCCGTCTCCCCCCCTGACCGTCCCCCCCCCTTTACCCC |
| CP001577.1 | 93,212 | 93,251 | 39 | GGGGGGTGCCGAAGGGGGTGCCGAGGGGGGTGCCGCGGG |
| CP001324.1 | 1,370,015 | 1,370,054 | 39 | GGGTGCCGAGGGGGGTGCCGAGGGGGGTGCCGAGGGGGG |
| CP001333.1 | 38,729 | 38,768 | 39 | GGGGGGTGCCGAGGGGGGTGCCGAGGGGGCTGCCGAGGG |
| Chromosome/Contig Name | Start | End | Length | Score | Sequence |
|---|---|---|---|---|---|
| CP001326.1 | 1,136,001 | 1,136,138 | 137 | 2.56 |
cgtcgagcggggCGAAAAGGGGGTGGAGGAGGGGGAAGGGGAaggggagggggagggggagggggagggggagggggagggggagggggagggggagggg gagggggagggggagggggacgcgagggaggagagcG |
| CP001328.1 | 228,226 | 228,347 | 121 | -1.8 |
ggtccccaccgccgccgtagccccctcccccgccgccgccgtagccccctcccccgccgccgtagccccctcccccgccgccgccgcggtacCCCCCACC ccggcccccgccgccgcggcc |
| CP001326.1 | 1,164,577 | 1,164,697 | 120 | 2.02 |
AGCTCGGAGACGGGGGAAGGGGACGAGGGGGACgagggagggggagggggcgcgggggcgagcgggGTGGACGAGGGGGTaggggagggcgcgggggtgg cggcgggggcggcggacgct |
| CP001334.1 | 318,921 | 319,035 | 114 | 1.68 |
GATGGATGATGGGCCGGGGATTGGGGGTGCGATGGACGGGTGGGGGGGGGATGTGATGGATAAACGGGTGGGGGGGGTGTGATGGATGGGtggggagggc gacggcggcggttg |
| CP001323.1 | 728,833 | 728,943 | 110 | -1.75 |
GCGCCTGCCTCGGCccctcccgcccccgcgtccacccccgcgtccacccccgcgtccacccccgcgtccacccccgcgtccacccccgcgtccacccccg cgtccaccgc |
| CP001577.1 | 95,969 | 96,078 | 109 | -1.83 |
gtttcgaccccccgcgcctctTCCCCCGCCGACCCCAGCCCCGGCTTTCGCCCCGCCGACCCCCTCCCCtcttcccccgccgcccggtcccctttccccg ccgcccggc |
| CP001324.1 | 583,388 | 583,495 | 107 | 1.99 |
gcggctggccGGGgtaggggcggcggcggcgggggcgggggccgGGGCCGGGGCAAGGGTCGGGGCAGGGGCGGGGGtaggggcggaggcggcggccgag gggggcg |
| CP001323.1 | 510,214 | 510,318 | 104 | -2.04 |
CTAccaccgcgtccccgcccgcgcccccccccACGTCCTCCCCCACGTCcccccccgcgtcctcccccgcgtccccccccgcgtccccccccgcgcaacg cctt |
| CP001575.1 | 747,317 | 747,418 | 101 | 1.93 |
cgatcgcgggcggggggctcggcgggggcggcgacggcgggggcggggagggaggagggggagacggcgggggcgggggcggtgacggcgggggcgtgaa G |
| CP001330.1 | 236,740 | 236,840 | 100 | -2.16 | TcacccctcgcgcccccgcgcgcgccccgcgccccttcCCCCTCGACCGCCCCCCCtacccccgccccgccccccccgcgcccccccggCTCCCGAAGTC |
| CP001327.1 | 985,735 | 985,834 | 99 | -1.95 | GTGAGCTGCACGCCCCCCCCTCCTCCCCCCCCTCTCCTCCCCATCCCGCCCCCCGAcacaccgcccccgccgccccttTCCTCATCCTCCCCGTCCACC |
| CP001576.1 | 297,451 | 297,550 | 99 | -2.13 | CCAGGACTTGCCCGCCTCccccctccccgtcccccccTCCTCCCTCCCCCTCTCCCCCTCCCCCGTCCCCTCCtcccccctcgccgccgcctcccaaGG |
| CP001323.1 | 190,331 | 190,429 | 98 | 1.71 | TCGAGGGttggacgacggggacggggatggggacgacggggacgatggGGACGATGGGGATtgggaggacggggacggggacggggagaaCAAGTCGG |
| CP001326.1 | 166,498 | 166,595 | 97 | 1.97 | ggaggacgtaGGAAGGGGCGGAAGGGGCGGAAggggcgggggtggacgtgGGGGCAGGGGTaagggcgggggcgggcgcgggggtggacgcgggagC |
| CP001331.1 | 708,053 | 708,149 | 96 | 1.72 | acggcagcggcggggaAGGGGAAGAAGGCGGGGGAGGAATCGGGGGAGTCGGAGGGGTAGAAtggggaggagggggagggggacGACCGGTTCGCG |
| CP001334.1 | 93,389 | 93,484 | 95 | -1.68 | CGCCCCGACCACCGACtcaccgccccgccccgaccACCCACCCACCAACCCTGACCCTAAACCCACCCACCCACCCCCCGGCACCCAGTTCTCCG |
| CP001577.1 | 99,863 | 99,957 | 94 | -1.71 | AGATCCCAACCCGCCCGTCCCAACCCGCCCGTCCCGACGCCCCGACCCTTCCCCCGCATGACCCTTCCCCCGCCCCAATTCCCCAcgtcgcgca |
| CP001324.1 | 493,003 | 493,095 | 92 | -1.8 | CGCTTCTCCCCCCTTCCGCCTCTCCCGCCCCTTCCGCCTCTCCCGCCCCTTCCGCCCCTTCCGCCCcttccgcccccgcctcctcttccgcc |
| CP001332.1 | 269,782 | 269,874 | 92 | 1.89 | GaagacgacggggaggatgagggggatggggaggaggagggcgatgGGGATGGGGGCGAGGGGGATggggcggaggtggaggcgggtGGCGA |
| CP001326.1 | 1,293,959 | 1,294,050 | 91 | 1.89 | cgcgcggcggaggcggcggggcggggcgggggaaggggaggcgggggaaggggaggcggacgacggggacggggaggcgggggaggcgccc |
| CP001323.1 | 1,140,934 | 1,141,025 | 91 | 1.97 | gctggaggaggaggagggcggcgggggcggggttggaggcgggggcggggttggaggcgggggcggggaggggAAGGCGACGGGCGTGAGG |
| CP001327.1 | 1,328,435 | 1,328,524 | 89 | -2.01 | AGAGGCGCGCTCcccccctcctccccgtccccaccctcctccccgtccccaccCTCCctcccccccgcgcctctccccgccctcatcgc |
| CP001324.1 | 1,412,312 | 1,412,398 | 86 | 1.62 | gagggcgagcgcgagggaggcggggtggggtgccgaggggggtgccgaggggggtgccgaggggggtgccgagggggacgcgttcg |
| CP001323.1 | 249,907 | 249,992 | 85 | -1.62 | CGAttcacgccgcccgcgccccccctCGACTCCCCATTCGTCCCCAGcccccctcgtcgtcccccccCCCCGTTCGTCACGCGGC |
| CP001330.1 | 206,411 | 206,495 | 84 | 1.93 | CGTTGgaggcgggcgtcggcgggggagggggcgggggcggcgggggcggcggcgggggaggggcgttggaccgcggcgggggca |
| CP001328.1 | 1,296,252 | 1,296,336 | 84 | -1.74 | CAAACGCActccgcgccccgccccccgccctcCCTTTCCCTTTCCCCTTCTTCCCCGTCCCTTCTTCCCCGaacccgccctcgc |
| CP001327.1 | 1,242,360 | 1,242,444 | 84 | -1.94 | cgccaccgcctcctcaCCCGACCCCGCCTCCCCGCCTTCCCCTTCCCCTTCTCcccccccggcgccccctTTACGCCCCCGTCT |
| CP001331.1 | 735,828 | 735,912 | 84 | -1.94 | AACACACGGCaccctccccgtccccgtccccgtccccgtccccgtccccgtccccgtccccgtcccccgccgctGCCAACCCGT |
| CP001323.1 | 1,229,014 | 1,229,097 | 83 | 1.7 | gcggagggaggaggcggggctgtgggcggcggggctggGGGAGGAGGTGACGGTGGCGGGggggatggaggaggagacggagc |
| CP001577.1 | 1,005,736 | 1,005,819 | 83 | 1.87 | TGTGGTCcacgggcgggggcggtgggggcgggaacggcggtgggggtgggggcgcggggatgggGTACGGGCAGGGCGGAGAC |
| CP001334.1 | 327,615 | 327,697 | 82 | 1.88 | gctggcggcgtcggggcgtgcgggggccggggacgggggcgggggcgacggggacggggacgcgagggaggggaagcggcgg |
| CP001576.1 | 511,452 | 511,533 | 81 | 1.99 | GCGGTGGAGGcatcggcgggggcgggggcgggggcgggggcatcggcgggggcgggggcgggggcggtcgTTGCGGGAAGC |
| CP001323.1 | 1,834,206 | 1,834,287 | 81 | 1.89 | gcggcggaggcgggcggaGGTTGGGGATGTGGGCGGGGTCGGGGGTTGGGGGGTTGGGGTTGGGGACGGGTCGGCGCGTTT |
| CP001327.1 | 754,602 | 754,683 | 81 | 1.94 | ccgtcgggggcggAGCGGGCTCGGGGGAGGGGagcggggcggggggcgggctcgggggAGAAGAAGGGGGGgtttcgtcga |
| CP001327.1 | 84,442 | 84,523 | 81 | 1.8 | tcgcgcgaggcgggaaGGGGAAGGGGAAGgggagcgggaggaggaggaggggagGGGAAGGAGGGAGGGGGGAACGCAccg |
| CP001328.1 | 1,094,075 | 1,094,156 | 81 | -1.8 | tcctcctcctcctcctccgcctcccctcccgcccgtccctctcccccgtcgcccccctcgcccccgccgcccgcatGAACC |
| CP001327.1 | 1,208,926 | 1,209,007 | 81 | -1.77 | catcggcacccccctcggcacccccctcggcacccccctcggcacccccgcccccgccaccgtccccgccccgctCTCTTT |
| CP001334.1 | 81,903 | 81,983 | 80 | -2.13 | cgcccttcaGGTCCCCGTCTCCCCCACCTCCCCCCGCCCCtccctccccctccccctcccccttcgccgccgccgccgcc |
| CP001327.1 | 113,011 | 113,091 | 80 | -1.91 | AACTCGATACCcaccgccccgtccccgtccccgtccccgtccccgtccccgtccccgtccccgtccctcgccgccgcctc |
| CP001576.1 | 1,049,839 | 1,049,919 | 80 | 1.93 | cggcggggcgcgcgggctcggcggggggaggggcggcggcggggggccggggggcgggggcgacggcggcggcggcgggc |
| CP001327.1 | 1,015,346 | 1,015,426 | 80 | -1.79 | gaaccgccggcgcctcctcccccccCCCGCTCTCCCTCCCCCCCCCGCTCACCTCCCCATCCCCCCGTCGTCAATACATC |
| CP001327.1 | 1,266,756 | 1,266,835 | 79 | 2 | tgggcggcggcggggccggtggcgggggcggcgggggcggtgggggcgaggggggcggcggtgaggggggcggcggcgc |
| CP001329.1 | 635,977 | 636,056 | 79 | -1.72 | caGACCTCCCGcaccccgtcgtccccctCGCCCTCACCCGCCCTTCCCActcccccccgccccgcgcctcgcaGCTCCT |
| CP001326.1 | 406,917 | 406,996 | 79 | 1.9 | gcgggggcgggcgctcgaggctgggTTGGGGGCGGGGAGACGGGGGGACGAGGGGGGAAGGGGCTGGGCGGTGCGTCGT |
| CP001330.1 | 935,308 | 935,387 | 79 | -2 | ATCATTCTCCCCATCATTCTCCCCCGCATCCCCCTCCCCCGCATCCCCCTCCCCCGCATCCCCCTccatcgcctccctc |
| CP001324.1 | 1,623,263 | 1,623,341 | 78 | 1.74 | tgatggtgaggacgacgggggtggggagggcgacgggggtggggaggacgacgggggaggggaggacgacggtgacga |
| CP001329.1 | 244,862 | 244,940 | 78 | 1.76 | aagggcgcgaaggGTGGCGGGGCAGGGGGCGGTcggggcggacggggcggacggggcggacggggcggtcgaggcggc |
| CP001323.1 | 231,620 | 231,698 | 78 | -1.79 | GCGTTCACGCCTCCGCACCCCCCCCAAAAAAACCTCCCCCCGCCCCTCCCTCCCCGCCCCCACGCCTCCggaccctaa |
| CP001327.1 | 648,517 | 648,595 | 78 | 1.65 | CGGATTAGGCGGGGGTCTCGGTGGGGGTCTCGGCGGGGGCCTGGGCGGGGGCCTGGGCGGGGGCCTGGGCGGCGGGCc |
| CP001325.1 | 586,295 | 586,373 | 78 | -1.62 | AGCACCGAGCTCCCCCGCGTTCCCCCGACCCCCCCGGAcggcccgtcgccccgccccacCCTCTCCCTagccgcctcg |