| Organism information | |
|---|---|
| Name | Botrytis cinerea B05.10 |
| Taxonomy ID | 332648 View in NCBI |
| Taxonomic Group | Eukaryota (Fungi) |
| Genome details | |
|---|---|
| Assembly Accession | GCA_000143535.4 View in NCBI |
| Assembly Name | ASM14353v4 |
| Sequencing Level | Complete Genome (haploid) |
| Source Database | GENBANK |
| Available G-quadruplexes | |||||
|---|---|---|---|---|---|
| Total | 62,229 | By regular expression | 8,031 | By G4Hunter | 54,198 |
| Chromosome/Contig Name | Start | End | Length | Sequence |
|---|---|---|---|---|
| CP009808.1 | 1,901,515 | 1,901,570 | 55 | GGGGGGTTTTTTAGGGGGGGGGGGGGGGGGGGGGGGGACGGGGGAAAGGAGGGGG |
| CP009816.1 | 214,806 | 214,851 | 45 | GGGGAAATGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGTTGGG |
| CP009808.1 | 126,856 | 126,898 | 42 | CCCCCCTCCAACTCCCCCTCCAACTCCCCTCCAACTCCCCCC |
| CP009809.1 | 2,788,060 | 2,788,102 | 42 | GGGGGGCAGAAGGGGGGGGGGGGGGGGGGGAGGGGGTTTGGG |
| CP009810.1 | 2,319,708 | 2,319,749 | 41 | CCCCCCCCCCCCCCCCCCCCCCCTTTTCCCCCTCCGCCCCC |
| CP009811.1 | 344,896 | 344,937 | 41 | GGGGAGAGGGAGGGGGAGAGGGAGGGGGAGAGGGAGGGGGG |
| CP009807.1 | 2,694,978 | 2,695,019 | 41 | CCCCCCCCCGCCCCCCCCCCCCCCCCTTATCCCCTCGCCCC |
| CP009814.1 | 1,609,222 | 1,609,263 | 41 | CCCCCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
| CP009817.1 | 2,120,273 | 2,120,314 | 41 | GGGGGCGAAGAAGGGGGTGACGAAGGGGGTGACGAAGGGGG |
| CP009808.1 | 126,905 | 126,946 | 41 | CCCCTCCAACTCCCCCCTCCAACTCCCCCTTTAACTCCCCC |
| CP009817.1 | 1,560,079 | 1,560,119 | 40 | CCCTTCATTCCCCCCCCCCTCCCATCCCCCTGCAACTCCC |
| CP009806.1 | 491,608 | 491,647 | 39 | GGGCGGAAGGGGGGGGAAGGGGGGGGGGGGGAGGGGGGG |
| CP009806.1 | 2,462,765 | 2,462,804 | 39 | CCCAATGCCCCCCCCCCCCCCCCCCCCCCCAAAGTGCCC |
| CP009806.1 | 2,462,765 | 2,462,804 | 39 | CCCAATGCCCCCCCCCCCCCCCCCCCCCCCAAAGTGCCC |
| CP009814.1 | 963,853 | 963,891 | 38 | GGGGCCAGGAGGGGGGGGGCGGGGGGGGGGGGGGAGGG |
| CP009808.1 | 1,422,872 | 1,422,910 | 38 | CCCCCACTCCCGCCCTCTCTCACCCCCTCACTCCCCCC |
| CP009812.1 | 379,937 | 379,975 | 38 | GGGGGCAAGGGGTGAGGTAGGGGGGGGGGGGGGGGGGG |
| CP009805.1 | 3,346,204 | 3,346,242 | 38 | GGGGGGTTTGCGTGGGGGGTGTTGGGTGGGGGGGGGGG |
| CP009811.1 | 1,196,692 | 1,196,730 | 38 | GGGGGGAAAGGGAGGGGAAAGAGGGGGAAAAGGAGGGG |
| CP009809.1 | 1,928,352 | 1,928,390 | 38 | CCCATCCACCCATCTACCCATCCACCCCCCCCCCCCCC |
| CP009805.1 | 3,830,816 | 3,830,854 | 38 | CCCCACTACCCACTATCCCCCCCCCCCCTTTCGCTCCC |
| CP009807.1 | 1,553,551 | 1,553,589 | 38 | CCCATCAATTCCCCCCCCCCCCCCCCATCCCAATTCCC |
| CP009815.1 | 997,505 | 997,542 | 37 | CCCCCCCTCCTCTCCCCTCCTGCTCCCTCCTGCTCCC |
| CP009820.1 | 1,462,321 | 1,462,358 | 37 | CCCCTTTCCTCCCCTTCCCTCCCCTAACTTTCCCCCC |
| CP009818.1 | 1,488,781 | 1,488,818 | 37 | CCCCCCACCGCCTCCCCTCCCCTTCCCTTCCCTTCCC |
| CP009819.1 | 1,407,296 | 1,407,333 | 37 | CCCTTCTATCCCCCCCCCCCCCCCCCCCCACCCCCCC |
| CP009806.1 | 1,735,139 | 1,735,176 | 37 | GGGAGGAAGGGGGGAAGGAAGGGAAAGGGGGGGGGGG |
| CP009818.1 | 1,724,458 | 1,724,495 | 37 | GGGGAAGAGAAGGGGAAGAGAAGGGGAAGAGAAGGGG |
| CP009818.1 | 1,724,502 | 1,724,539 | 37 | GGGGAAGAGAAGGGGAAGAGAAGGGGGGAGAAGGGGG |
| CP009816.1 | 1,694,735 | 1,694,772 | 37 | CCCCCCCCATCCTTCCCCTCCCTCTCCCTCTCCACCC |
| CP009813.1 | 2,443,384 | 2,443,421 | 37 | CCCCCCTCCCCCTCCCCCTACCCCTCCCCATTCCCCC |
| CP009811.1 | 1,207,419 | 1,207,456 | 37 | CCCCAGAAGAACCCCAGAAGACCCCCAGAAGACCCCC |
| CP009808.1 | 2,130,824 | 2,130,861 | 37 | CCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCAACCC |
| CP009805.1 | 3,845,378 | 3,845,415 | 37 | GGGGGATACGAGGGGTGCGGGGAAGGGGGGGGGGGGG |
| CP009811.1 | 1,592,541 | 1,592,578 | 37 | CCCCATCTCATCCCAACTCATCCCCTCCCCCTCCCCC |
| CP009817.1 | 312,149 | 312,186 | 37 | GGGAATGAGGGGGAGGGGTAGGGGGGGGGGGGGGGGG |
| CP009806.1 | 2,620,942 | 2,620,979 | 37 | GGGGTTTATTTGGGGTGTATGGGGGTACTTGCGGGGG |
| CP009811.1 | 1,667,677 | 1,667,714 | 37 | CCCCCCCCCCCCCCCCCCCCCCCCCTTCCCCAGCCCC |
| CP009820.1 | 822,429 | 822,465 | 36 | CCCCCACGTCTTCCCCCAGCAGCCCCAGCCAAACCC |
| CP009809.1 | 2,818,560 | 2,818,596 | 36 | GGGGGGTGGATGGGGTGGGAGGGGGAGGGGGAGGGG |
| CP009820.1 | 996,445 | 996,481 | 36 | CCCTAAATGTCCCCAAAGTCTCCCCAAAGTCCCCCC |
| CP009819.1 | 859,308 | 859,344 | 36 | GGGTGTAAAGGGGGTGCAAAGGGGGTGCAAAGGGGG |
| CP009819.1 | 1,116,385 | 1,116,421 | 36 | GGGGGGGGGGGGGGGGGGGGGGGGGAGGGAGAGGGG |
| CP009806.1 | 1,148,139 | 1,148,175 | 36 | GGGATGGAAGGGGCAAGGAAGGGGAGAGGGAGGGGG |
| CP009806.1 | 1,233,649 | 1,233,685 | 36 | CCCTCTCGAGCCCCCCCTCGCTCCCTGCGGCTCCCC |
| CP009817.1 | 1,752,197 | 1,752,233 | 36 | CCCCCCCCTTCCCAACCCTCCCAGCCCCACAATCCC |
| CP009807.1 | 2,792,324 | 2,792,360 | 36 | CCCCCCGTCCCCCGTCCCCCGTCTCCCCCCCCCCCC |
| CP009818.1 | 1,935,475 | 1,935,511 | 36 | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
| CP009807.1 | 2,963,444 | 2,963,480 | 36 | CCCCTCCACCCCATCATCTCCCCCCCCGCGCGCCCC |
| CP009809.1 | 1,869,832 | 1,869,868 | 36 | GGGTTATTGGGGGGGGGGGGGGGGCGGGGGGGGGGG |
| Chromosome/Contig Name | Start | End | Length | Score | Sequence |
|---|---|---|---|---|---|
| CP009810.1 | 2,387,088 | 2,387,314 | 226 | 2.25 |
GATGGGGAGGTTTAGATGATTGGGgtggggagggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagagggga gaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggagaggggaga ggggagaggggagatggTATATGGAA |
| CP009818.1 | 1,560,707 | 1,560,896 | 189 | -1.68 |
tctctccctctccctctccctctccctctccctctcccccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctcc ctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctt |
| CP009811.1 | 1,484,621 | 1,484,793 | 172 | -1.6 |
cttcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctc ccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctc |
| CP009817.1 | 646,834 | 646,970 | 136 | -1.79 |
TTTTCCCATCCCCTgcttccctctcccccctctcccaacacctcccctcctccaatcccaaacccaaacccccaaacccccaaacccccaaacccACAAC CCACTAACCcacccctctctccctccaccCAGAGTT |
| CP009815.1 | 854,834 | 854,961 | 127 | -1.61 |
atctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctct ccctctccctctccctctccctctcct |
| CP009815.1 | 613,949 | 614,074 | 125 | 1.76 |
TTTGTGAGGAGTGGAatggggggagggaggggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaag ggaagggaagggaaggagggACGGA |
| CP009818.1 | 1,781,718 | 1,781,838 | 120 | 1.75 |
TGAGATTGGGAGGCTGGTTGGGGAGGGGGTTAGTTAGGGGGTGTGGTGTGGGAGGGGGTTAGTTAGGGGGTGTGGTGTGGGAGGGGGTGGATGACGGGGA GGGGGGACTTACAGTGCGTT |
| CP009806.1 | 3,234,411 | 3,234,528 | 117 | 2.21 |
CCATGAGATgtgggaggggaaggggagggggaaggggaaggggaaggggaaggggaaggggaaggggaaggggaaggggaaggggaaggggaaggggaag gggaatggGAAGTTCCT |
| CP009808.1 | 842,320 | 842,436 | 116 | -1.91 |
AGACTCCAACTACCATCCCCTCCCCGCCGACTTCTTCCCCGCCCCCCATACCTACACCCCCTACCCCCacacccccctccccctcatCGCCCCGCGCATC CTCCCCGCCACCATCC |
| CP009815.1 | 540,155 | 540,268 | 113 | 1.66 |
gaaaggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaggggaagg gaaggataAGAAA |
| CP009808.1 | 126,845 | 126,955 | 110 | -1.85 |
TCTATCCAACTCCCCCCTCCAACTCCCCCTCCAACTCCCCTCCAACTCCCCCCTCCAACTCCCCTCCAACTCCCCCCTCCAACTCCCCCTTTAACTCCCC CTTTAACTTC |
| CP009820.1 | 1,730,684 | 1,730,793 | 109 | 1.98 |
TGAGgttggggagggagaagaggaggggggggggagaagaggaggggggagggagaggaggaggggggagggagaggaggaggggggagggagaggagga ggaggagca |
| CP009819.1 | 1,666,821 | 1,666,927 | 106 | -1.89 |
ACCTAATCTCTCTTCCCATCCCCCCTCCCACCACCCACAAACCCCCATCCATTCCCCACCGgtcctccccctcccccaccCCCCTTAACCCCATACCCCA ACGGCG |
| CP009814.1 | 2,289,395 | 2,289,500 | 105 | -1.77 |
cCATCTCCCCCTCTCAAACCCtaaccccaaccccaacccccttcccctctctctctccaaacCCCTCCCCACACAAAAATCCCCACCCCTCCGCACCGCA AAAAA |
| CP009814.1 | 1,643,465 | 1,643,568 | 103 | 2.03 |
TGGATGGGTTGGGCGGGCTGAGGTGGGGGGTGGGGGGGAGGCTGGGGGAGAGCTTGGGGAGGATgatggggggagggggggtgggataggatgggatagg ata |
| CP009805.1 | 853,724 | 853,827 | 103 | 1.8 |
agGGGAGGTTGGatgaggagagaggggagggggttgggatgaggagagaggggagggggttgggatgaggagagaggggagggggttggGATGCAGGTAT AGT |
| CP009808.1 | 1,852,528 | 1,852,629 | 101 | -1.6 |
ttccaagctcccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctcccctccctaCACCCTCCACAAAA C |
| CP009811.1 | 1,090,252 | 1,090,352 | 100 | -1.73 | TTCGCACTCTCCTCCCCACCCGTCCCCTCTCCACCCATCCACTCCCCCATTCCCTCACCCACCCCATCCTAATCCCCCAAACTCCCCTCACAGCTTCCCA |
| CP009819.1 | 661,699 | 661,799 | 100 | -1.94 | atatcccatatcccatatccccTTCCCCAATTCCCCTTCCCcaattcccatccccatccccatccccatccccatccccaaatccaatccaaatccccaG |
| CP009815.1 | 854,957 | 855,055 | 98 | -1.59 | tcctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctccctctct |
| CP009813.1 | 1,222,728 | 1,222,826 | 98 | -1.9 | acCACAACCCACAACCCACACACCCcaatcccctcccctcccgatcccattcccaaacccaccccccctcctccccctctctaTAAACCATCCCCCGA |
| CP009815.1 | 88,078 | 88,175 | 97 | -1.9 | atccagaacttcctcctccccctcccccttctcctcctcctcttcctccccctACCCCCCTACCCCCCTACCCcctacctccctccctaccGTGCTC |
| CP009820.1 | 1,263,951 | 1,264,047 | 96 | -1.85 | AACCCACCCTCACTACCACCTTCCCCCACCctccccatctccctcccctttccctttcccctctcaTCCCCCCCACCCAAATTCAACCCACCAATC |
| CP009814.1 | 541,721 | 541,817 | 96 | 1.65 | tggagagaaggtggaggtggagggggGAGTTTTTGGTGGGTGGGGGtgaggatggggatggggatgaagatggggaggatggggatgagtTTGTCG |
| CP009807.1 | 2,798,687 | 2,798,783 | 96 | -1.73 | CCACCTCACTTCTCTCCCacaccccccctccccaaaaccGCCacaaccccctcccccccagCAACCACACACCACTCCCCCCCTCTACTCCAAGCG |
| CP009809.1 | 780,014 | 780,109 | 95 | 1.77 | GTGGTtggggagatggaagaggagggggaggagggggaggagagaggcgGGGAAGAGGGGGTTTCGATGGGGGAAGTGGGGGAAGTAGGCGTTTG |
| CP009807.1 | 2,145,743 | 2,145,837 | 94 | -2.01 | ctcctcctcctcctcctcctcctcccctcacccctctcccctcacccctctcccacccctccccatccccagCAACCCCTTTTCCTGCCCCAAA |
| CP009812.1 | 676,801 | 676,895 | 94 | 1.83 | GAAATGGTTTCTGGGgtgggaaaggggggaggggatgggaaaggggagaggggatggGAAACGGGAGAGGGGATGGGGAGAGTGTGGAATTGGA |
| CP009818.1 | 1,770,550 | 1,770,643 | 93 | -1.9 | ACACACTCCCTTCCCTCAccttccccatccccatctccctctccctccccaaccCCCTCACCACCCCCCCAGCCCACCCACAAACCGCCCGCA |
| CP009814.1 | 1,666,058 | 1,666,150 | 92 | 1.9 | GGTAGAAGACgggatgggagggaggggggaggagaggggaagggagaggggaagggagaggggaagggagaggggaagggagagggataGAT |
| CP009816.1 | 176,665 | 176,756 | 91 | -1.81 | CTCCCTCCCCAACCACCATCTTAACCCCCACCCCAACCCCGCAACCCCAAACATAACCCCCGCACAAACCCCCATCCCCTCCGTATAATAC |
| CP009819.1 | 1,524,299 | 1,524,390 | 91 | -1.77 | cctCACCCTCATCATCCCCAACCGCCCTCCTCCTcaccctccccctccccctcctcacTCCCAAACCCCCACTCCCATTCCCAAAACCTCA |
| CP009815.1 | 996,818 | 996,908 | 90 | -1.72 | ctcacctcCCCATCCTCCCTTCAACCCCCAACCAatcctccctccctaccaCCCTACCCCTCCAACCCACCATCCAAACCCCCAAGCCAT |
| CP009809.1 | 661,340 | 661,429 | 89 | -1.7 | tcccttctcATCCTAGATCCCCACCCCCCTCTTAAATTCCCCACCCCCAACTAACCCAACCGCCCCCCTTTCCCAGCATCCCAACATCC |
| CP009818.1 | 1,822,653 | 1,822,742 | 89 | 2.27 | tgtggtgtggtgtggaggaggggaggggaggggaggggaggggaggggaggggaggggaggggaggggaggggaggttATGTGTTATGA |
| CP009816.1 | 900,068 | 900,156 | 88 | 1.67 | GTTGTGAGGGGACAGGTTAATggggggtgggatgggaatgtTGGGGGGATGTCGGTAGGGATGGGGGGAGTTGGGATGGGGATACCAC |
| CP009812.1 | 828,161 | 828,249 | 88 | -2.03 | ttcccctccatcccattctctctccccatccccatccccatccccatccccatccccattcccccACCTCAACCCCTCAATCCCATTA |
| CP009816.1 | 214,777 | 214,864 | 87 | 2.36 | GCTGGGCAATTGGGGTTGGGACTGGGGGCGGGGAaatggggggggggggggggggggggggggagggggttgggATTTGGTGAATAT |
| CP009811.1 | 2,152,427 | 2,152,514 | 87 | 1.84 | GGAGGGagacgaggaagaggggTTGGGGGAGTGGGAGAGGGTGGGGAAGCGGTGTGGGGAGGGGATTGGGGGGTGTGATTGGTGAGT |
| CP009808.1 | 1,901,507 | 1,901,594 | 87 | 2.24 | AATCACTAGGGGGGTTTTttaggggggggggggggggggggggggacgggggaaaggagggggagaggggagaggggttcttgatat |
| CP009816.1 | 2,260,957 | 2,261,044 | 87 | 1.72 | GCAGGGAGATGGGGGATGAGGAGAGGGGTTGTGGGGTTGGTTGCTGGGAGTGGGGTTTTGGGGGGCGTGTGGTGGGGGTTTGTTTGT |
| CP009806.1 | 354,363 | 354,450 | 87 | -1.92 | CCCTTTCCTTGAGCAcccaaccccctcccccaactCCAATGCCCCCtcaccccctccctccccccaacCCACCTCCTCAATTCCCTc |
| CP009817.1 | 39,344 | 39,430 | 86 | 1.94 | CAACAATGagatgggggatggggaggggaggggaggggaggggatggatgggatgggatgggatgggatgggatgggatgggatta |
| CP009811.1 | 2,312,227 | 2,312,313 | 86 | 1.85 | GTTTGGGTGTTGGTCGTGGGgtaggggagaggagggggagggggagagggagagggagagggagggggaggggtaTAGAATCTAGA |
| CP009807.1 | 320,966 | 321,052 | 86 | 1.69 | ATGGGAGAGGTTCTGTATTGGGGGGGCTGGGAGGAGGGGTGTGTGGGGTTTTGGGAGGGTTGGGAGGGGTATTGGGAGAGGTTTTT |
| CP009813.1 | 463,840 | 463,926 | 86 | 1.64 | CGAGACTTGTGGGGCACGGGGAGGGTGTTGAGGGGGAAGAGGGCAGGGAGGGATTGCTGGGGTagggagggggaagagaggaagtT |
| CP009808.1 | 1,106,203 | 1,106,288 | 85 | -1.84 | CACACCATCACTCCCCAACTTCCCCTCCgccctctccccctcctccccattaaccccctccccaaacAACCTCCCCAACGCCTCA |
| CP009811.1 | 949,207 | 949,292 | 85 | 1.82 | CCGAGTTTGGCagggggaaaggggggaaaggtggaaaggggagaggggggaggagagggggtggagagaagagggggtggagagg |
| CP009809.1 | 1,831,366 | 1,831,451 | 85 | -1.58 | tgcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcctcccttcccacCCTCCGGCC |
| CP009820.1 | 446,935 | 447,020 | 85 | 1.68 | CTTGTGGATTTGTTGGGGGTGAGGGGTGAGGAGGGATGGGGAATAGGGAaagaaggggaggggagtgaTGGGGTGGAGTGAGGTG |