Metagenome / Metatranscriptome Family F018019

Basic Information
Family ID	F018019
Family Type	Metagenome / Metatranscriptome
Number of Sequences	237
Average Sequence Length	41 residues
Representative Sequence	FVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Number of Associated Samples	170
Number of Associated Scaffolds	237

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.27 %
% of genes near scaffold ends (potentially truncated)	97.05 %
% of genes from short scaffolds (< 2000 bps)	92.41 %
Associated GOLD sequencing projects	155
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (92.827 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.097 % of family members)
Environment Ontology (ENVO)	Unclassified (29.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.131 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.25% β-sheet: 2.90% Coil/Unstructured: 89.86%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 237 Family Scaffolds
PF09865	DUF2092	4.64
PF01758	SBF	1.69
PF00691	OmpA	1.69
PF04392	ABC_sub_bind	0.84
PF07728	AAA_5	0.84
PF06186	DUF992	0.84
PF13439	Glyco_transf_4	0.84
PF01042	Ribonuc_L-PSP	0.84
PF07411	DUF1508	0.84
PF16576	HlyD_D23	0.84
PF02630	SCO1-SenC	0.84
PF00528	BPD_transp_1	0.84
PF00004	AAA	0.84
PF13505	OMP_b-brl	0.84
PF03401	TctC	0.42
PF00120	Gln-synt_C	0.42
PF13091	PLDc_2	0.42
PF00497	SBP_bac_3	0.42
PF00873	ACR_tran	0.42
PF01734	Patatin	0.42
PF01163	RIO1	0.42
PF13011	LZ_Tnp_IS481	0.42
PF01617	Surface_Ag_2	0.42
PF07681	DoxX	0.42
PF09364	XFP_N	0.42
PF00378	ECH_1	0.42
PF00005	ABC_tran	0.42
PF01408	GFO_IDH_MocA	0.42
PF01061	ABC2_membrane	0.42
PF01011	PQQ	0.42
PF13546	DDE_5	0.42
PF00296	Bac_luciferase	0.42
PF13751	DDE_Tnp_1_6	0.42
PF00082	Peptidase_S8	0.42
PF13683	rve_3	0.42
PF13441	Gly-zipper_YMGG	0.42
PF13511	DUF4124	0.42
PF09363	XFP_C	0.42
PF13340	DUF4096	0.42
PF12759	HTH_Tnp_IS1	0.42
PF00274	Glycolytic	0.42

COG ID	Name	Functional Category	% Frequency in 237 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.84
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.84
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	0.84
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.42
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.42
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.42
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.42
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	0.42
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.42
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.42
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.42

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.83 %
Unclassified	root	N/A	7.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.83 %
Unclassified	root	N/A	7.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.83 %
Unclassified	root	N/A	7.17 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	50.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.89 %
Unclassified	root	N/A	7.17 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.42 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	50.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.08 %
Unclassified	root	N/A	7.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.11 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.11 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.42 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	50.63 %
Unclassified	root	N/A	7.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.11 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.11 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.27 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.42 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.42 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.42 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.42 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	50.63 %
Unclassified	root	N/A	7.17 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.69 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.27 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.84 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.42 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.42 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.42 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.42 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	50.63 %
Unclassified	root	N/A	7.17 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.27 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	0.84 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.84 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.42 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.42 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.42 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.42 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	50.63 %
Unclassified	root	N/A	7.17 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.27 %
Acidisoma cellulosilyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	0.84 %
unclassified Rubrivivax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax	0.84 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.42 %
Mesorhizobium waimense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium waimense	0.42 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.42 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.42 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.42 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	50.63 %
Unclassified	root	N/A	7.17 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.27 %
Rubrivivax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp.	0.84 %
Acidisoma cellulosilyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	0.84 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
Bradyrhizobium sp. DOA9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	0.42 %
Mesorhizobium waimense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium waimense	0.42 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.42 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.42 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.42 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig63465	Not Available	771	Open in IMG/M
2170459011\|GI3SL7401CTQQN	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	502	Open in IMG/M
3300000550\|F24TB_11480263	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	521	Open in IMG/M
3300000559\|F14TC_104402121	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	602	Open in IMG/M
3300000955\|JGI1027J12803_101147657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300000956\|JGI10216J12902_101645940	All Organisms → cellular organisms → Bacteria	2217	Open in IMG/M
3300004104\|Ga0058891_1579817	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	528	Open in IMG/M
3300004156\|Ga0062589_101066854	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	761	Open in IMG/M
3300004801\|Ga0058860_10217885	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300005093\|Ga0062594_101094556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300005332\|Ga0066388_104266610	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	729	Open in IMG/M
3300005354\|Ga0070675_100965488	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005354\|Ga0070675_101069127	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300005439\|Ga0070711_100451233	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1053	Open in IMG/M
3300005467\|Ga0070706_101540885	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300005468\|Ga0070707_100137283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	2379	Open in IMG/M
3300005536\|Ga0070697_100791641	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	839	Open in IMG/M
3300005617\|Ga0068859_100780080	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005618\|Ga0068864_101031914	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005718\|Ga0068866_10758777	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	671	Open in IMG/M
3300005841\|Ga0068863_100221825	All Organisms → cellular organisms → Bacteria → Proteobacteria	1822	Open in IMG/M
3300005841\|Ga0068863_102144469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp.	569	Open in IMG/M
3300005842\|Ga0068858_100311295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1504	Open in IMG/M
3300005843\|Ga0068860_101848904	Not Available	626	Open in IMG/M
3300005844\|Ga0068862_100193017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1833	Open in IMG/M
3300006028\|Ga0070717_11787838	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	555	Open in IMG/M
3300006050\|Ga0075028_100901732	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	545	Open in IMG/M
3300006237\|Ga0097621_100656099	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300006845\|Ga0075421_100402807	Not Available	1643	Open in IMG/M
3300006845\|Ga0075421_100901911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1009	Open in IMG/M
3300006854\|Ga0075425_101734424	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	702	Open in IMG/M
3300006880\|Ga0075429_100077041	All Organisms → cellular organisms → Bacteria → Proteobacteria	2904	Open in IMG/M
3300006881\|Ga0068865_101578387	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	589	Open in IMG/M
3300006881\|Ga0068865_101967150	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	530	Open in IMG/M
3300006904\|Ga0075424_100276061	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1787	Open in IMG/M
3300009094\|Ga0111539_11830207	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300009098\|Ga0105245_12457913	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	574	Open in IMG/M
3300009100\|Ga0075418_11587124	Not Available	711	Open in IMG/M
3300009101\|Ga0105247_10319296	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300009162\|Ga0075423_12169508	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300009177\|Ga0105248_10570643	Not Available	1277	Open in IMG/M
3300009553\|Ga0105249_13452835	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300010047\|Ga0126382_12176685	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300010147\|Ga0126319_1650960	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	509	Open in IMG/M
3300010154\|Ga0127503_10468155	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	574	Open in IMG/M
3300010373\|Ga0134128_13052573	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300010375\|Ga0105239_10557016	All Organisms → cellular organisms → Bacteria → Proteobacteria	1306	Open in IMG/M
3300010396\|Ga0134126_11119517	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	878	Open in IMG/M
3300010397\|Ga0134124_12193837	Not Available	592	Open in IMG/M
3300010398\|Ga0126383_12929337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	557	Open in IMG/M
3300010399\|Ga0134127_10990100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	900	Open in IMG/M
3300010399\|Ga0134127_11582347	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	729	Open in IMG/M
3300012198\|Ga0137364_10434939	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300012212\|Ga0150985_113746486	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300012898\|Ga0157293_10330542	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300012914\|Ga0157297_10044169	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300012943\|Ga0164241_10509638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300012960\|Ga0164301_10420446	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	941	Open in IMG/M
3300012960\|Ga0164301_11128443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300013104\|Ga0157370_11261539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300013297\|Ga0157378_12013232	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	627	Open in IMG/M
3300013308\|Ga0157375_12910674	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300014325\|Ga0163163_10387670	All Organisms → cellular organisms → Bacteria → Proteobacteria	1455	Open in IMG/M
3300014325\|Ga0163163_12076614	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300014325\|Ga0163163_13137576	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	515	Open in IMG/M
3300014326\|Ga0157380_10009769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6885	Open in IMG/M
3300014326\|Ga0157380_10625650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300014968\|Ga0157379_10151064	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300014969\|Ga0157376_10106266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2462	Open in IMG/M
3300014969\|Ga0157376_10254496	Not Available	1642	Open in IMG/M
3300014969\|Ga0157376_11225048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	779	Open in IMG/M
3300015371\|Ga0132258_10267938	All Organisms → cellular organisms → Bacteria	4185	Open in IMG/M
3300015371\|Ga0132258_10941826	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300015371\|Ga0132258_11877821	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300015371\|Ga0132258_13836655	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1023	Open in IMG/M
3300015372\|Ga0132256_101011376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	947	Open in IMG/M
3300015372\|Ga0132256_101364704	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300015373\|Ga0132257_103944794	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	540	Open in IMG/M
3300015374\|Ga0132255_103378734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300016270\|Ga0182036_10909785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	722	Open in IMG/M
3300016294\|Ga0182041_10274613	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1384	Open in IMG/M
3300016294\|Ga0182041_11159153	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	704	Open in IMG/M
3300016294\|Ga0182041_12246252	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	510	Open in IMG/M
3300016319\|Ga0182033_10158012	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1759	Open in IMG/M
3300016341\|Ga0182035_10439046	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1104	Open in IMG/M
3300016341\|Ga0182035_10770268	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	842	Open in IMG/M
3300016341\|Ga0182035_12039732	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	521	Open in IMG/M
3300016357\|Ga0182032_11452399	Not Available	595	Open in IMG/M
3300016371\|Ga0182034_10242741	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1417	Open in IMG/M
3300016371\|Ga0182034_10254739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1386	Open in IMG/M
3300016371\|Ga0182034_10851542	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	782	Open in IMG/M
3300016371\|Ga0182034_11948078	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	519	Open in IMG/M
3300016387\|Ga0182040_10174342	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300016387\|Ga0182040_10487187	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	983	Open in IMG/M
3300016387\|Ga0182040_11099959	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	666	Open in IMG/M
3300016387\|Ga0182040_11120528	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	660	Open in IMG/M
3300016387\|Ga0182040_11408692	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	590	Open in IMG/M
3300016404\|Ga0182037_10957850	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	744	Open in IMG/M
3300016422\|Ga0182039_10167256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1722	Open in IMG/M
3300016422\|Ga0182039_10401060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300017792\|Ga0163161_10229477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1440	Open in IMG/M
3300017792\|Ga0163161_10945733	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	733	Open in IMG/M
3300017792\|Ga0163161_11169818	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	664	Open in IMG/M
3300017932\|Ga0187814_10260224	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	659	Open in IMG/M
3300018469\|Ga0190270_10844350	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300018469\|Ga0190270_11445495	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300018476\|Ga0190274_11365413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300019356\|Ga0173481_10868196	Not Available	505	Open in IMG/M
3300020580\|Ga0210403_10901310	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	697	Open in IMG/M
3300020583\|Ga0210401_11538622	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	522	Open in IMG/M
3300021401\|Ga0210393_10121973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2084	Open in IMG/M
3300021403\|Ga0210397_10509528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	912	Open in IMG/M
3300021403\|Ga0210397_10841317	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	709	Open in IMG/M
3300021405\|Ga0210387_10486436	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1097	Open in IMG/M
3300021474\|Ga0210390_11592231	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	514	Open in IMG/M
3300021475\|Ga0210392_10792780	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	707	Open in IMG/M
3300022506\|Ga0242648_1007411	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1158	Open in IMG/M
3300022525\|Ga0242656_1070360	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	640	Open in IMG/M
3300022533\|Ga0242662_10009507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1929	Open in IMG/M
3300022533\|Ga0242662_10089780	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	861	Open in IMG/M
3300022533\|Ga0242662_10091189	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	856	Open in IMG/M
3300022712\|Ga0242653_1068905	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	605	Open in IMG/M
3300022726\|Ga0242654_10348509	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	556	Open in IMG/M
3300022726\|Ga0242654_10436554	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	509	Open in IMG/M
3300025315\|Ga0207697_10200189	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300025899\|Ga0207642_11111526	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	511	Open in IMG/M
3300025901\|Ga0207688_10435997	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300025903\|Ga0207680_10143091	Not Available	1587	Open in IMG/M
3300025907\|Ga0207645_10929276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp.	590	Open in IMG/M
3300025907\|Ga0207645_10980061	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	573	Open in IMG/M
3300025908\|Ga0207643_10685777	Not Available	662	Open in IMG/M
3300025908\|Ga0207643_10734565	Not Available	639	Open in IMG/M
3300025910\|Ga0207684_10460662	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1091	Open in IMG/M
3300025910\|Ga0207684_10793680	Not Available	801	Open in IMG/M
3300025926\|Ga0207659_10112883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	2069	Open in IMG/M
3300025930\|Ga0207701_10612575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M
3300025933\|Ga0207706_10865925	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300025933\|Ga0207706_11255419	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	614	Open in IMG/M
3300025936\|Ga0207670_11253775	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	628	Open in IMG/M
3300025937\|Ga0207669_10167066	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300025937\|Ga0207669_11144987	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	658	Open in IMG/M
3300025941\|Ga0207711_11212841	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	696	Open in IMG/M
3300025960\|Ga0207651_10020032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4026	Open in IMG/M
3300025981\|Ga0207640_11880716	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	541	Open in IMG/M
3300025986\|Ga0207658_12173094	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300026023\|Ga0207677_10283311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1361	Open in IMG/M
3300026067\|Ga0207678_10853050	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300026075\|Ga0207708_10257964	Not Available	1406	Open in IMG/M
3300026095\|Ga0207676_11481027	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	675	Open in IMG/M
3300026118\|Ga0207675_102638396	Not Available	512	Open in IMG/M
3300026121\|Ga0207683_11042225	Not Available	759	Open in IMG/M
3300027701\|Ga0209447_10091932	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	833	Open in IMG/M
3300027727\|Ga0209328_10034720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1551	Open in IMG/M
3300027821\|Ga0209811_10124022	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	943	Open in IMG/M
3300027907\|Ga0207428_10454085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	934	Open in IMG/M
3300028047\|Ga0209526_10691453	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	643	Open in IMG/M
3300028809\|Ga0247824_10436990	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300029636\|Ga0222749_10752948	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	533	Open in IMG/M
3300030590\|Ga0247643_1194659	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300030740\|Ga0265460_11192352	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	728	Open in IMG/M
3300030844\|Ga0075377_11696701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	650	Open in IMG/M
3300030923\|Ga0138296_1758719	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	930	Open in IMG/M
3300031057\|Ga0170834_102885678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1308	Open in IMG/M
3300031057\|Ga0170834_105310547	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	811	Open in IMG/M
3300031226\|Ga0307497_10514464	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	593	Open in IMG/M
3300031231\|Ga0170824_110376429	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	726	Open in IMG/M
3300031231\|Ga0170824_115061258	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	990	Open in IMG/M
3300031231\|Ga0170824_122742695	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	703	Open in IMG/M
3300031231\|Ga0170824_123716799	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	504	Open in IMG/M
3300031231\|Ga0170824_127935282	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	501	Open in IMG/M
3300031231\|Ga0170824_128800869	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	705	Open in IMG/M
3300031446\|Ga0170820_12868012	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	604	Open in IMG/M
3300031469\|Ga0170819_11130037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300031474\|Ga0170818_109507022	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1017	Open in IMG/M
3300031474\|Ga0170818_112687504	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	505	Open in IMG/M
3300031474\|Ga0170818_115380808	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1155	Open in IMG/M
3300031543\|Ga0318516_10430587	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031545\|Ga0318541_10326734	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300031545\|Ga0318541_10549798	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	646	Open in IMG/M
3300031546\|Ga0318538_10626297	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031547\|Ga0310887_10582666	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300031572\|Ga0318515_10083195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300031681\|Ga0318572_10354121	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	871	Open in IMG/M
3300031720\|Ga0307469_10599167	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	984	Open in IMG/M
3300031720\|Ga0307469_10606917	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300031724\|Ga0318500_10295295	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031740\|Ga0307468_100303396	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300031740\|Ga0307468_101987185	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	557	Open in IMG/M
3300031748\|Ga0318492_10804108	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	506	Open in IMG/M
3300031768\|Ga0318509_10215891	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1068	Open in IMG/M
3300031792\|Ga0318529_10496260	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	568	Open in IMG/M
3300031796\|Ga0318576_10625641	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	507	Open in IMG/M
3300031798\|Ga0318523_10253242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300031823\|Ga0307478_11140601	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	650	Open in IMG/M
3300031823\|Ga0307478_11487557	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	561	Open in IMG/M
3300031832\|Ga0318499_10325394	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	592	Open in IMG/M
3300031833\|Ga0310917_10666488	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	705	Open in IMG/M
3300031879\|Ga0306919_10084836	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	2192	Open in IMG/M
3300031879\|Ga0306919_10132879	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1795	Open in IMG/M
3300031879\|Ga0306919_11215929	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	572	Open in IMG/M
3300031880\|Ga0318544_10006463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3554	Open in IMG/M
3300031890\|Ga0306925_10262906	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300031890\|Ga0306925_10486673	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1315	Open in IMG/M
3300031890\|Ga0306925_10492356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium waimense	1306	Open in IMG/M
3300031890\|Ga0306925_11577600	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	639	Open in IMG/M
3300031894\|Ga0318522_10212555	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	733	Open in IMG/M
3300031910\|Ga0306923_10076783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3738	Open in IMG/M
3300031910\|Ga0306923_10827314	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1020	Open in IMG/M
3300031912\|Ga0306921_10515022	Not Available	1390	Open in IMG/M
3300031912\|Ga0306921_11492836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300031912\|Ga0306921_12012018	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	615	Open in IMG/M
3300031912\|Ga0306921_12383830	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	552	Open in IMG/M
3300031942\|Ga0310916_11461228	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	558	Open in IMG/M
3300031945\|Ga0310913_10680182	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	728	Open in IMG/M
3300031945\|Ga0310913_10825277	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	653	Open in IMG/M
3300031945\|Ga0310913_11244447	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	517	Open in IMG/M
3300031946\|Ga0310910_10128386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1917	Open in IMG/M
3300031946\|Ga0310910_11208095	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	586	Open in IMG/M
3300031947\|Ga0310909_10873219	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	740	Open in IMG/M
3300032001\|Ga0306922_10222394	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300032035\|Ga0310911_10057744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2039	Open in IMG/M
3300032044\|Ga0318558_10338498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300032055\|Ga0318575_10644652	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	536	Open in IMG/M
3300032064\|Ga0318510_10170541	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	867	Open in IMG/M
3300032065\|Ga0318513_10559724	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	560	Open in IMG/M
3300032076\|Ga0306924_10159196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2587	Open in IMG/M
3300032076\|Ga0306924_11532642	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	705	Open in IMG/M
3300032076\|Ga0306924_11756482	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	648	Open in IMG/M
3300032091\|Ga0318577_10445507	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	618	Open in IMG/M
3300032180\|Ga0307471_103147365	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300032261\|Ga0306920_100697329	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300032261\|Ga0306920_101522207	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	954	Open in IMG/M
3300032261\|Ga0306920_102410283	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	726	Open in IMG/M
3300033475\|Ga0310811_10702335	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	977	Open in IMG/M
3300033551\|Ga0247830_11167576	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	615	Open in IMG/M
3300034149\|Ga0364929_0121323	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	835	Open in IMG/M
3300034668\|Ga0314793_131603	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.35%
Host-Associated	Host-Associated	31.22%
Engineered	Engineered	0.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.24%
Plants	Host-Associated → Plants	30.80%
Aquatic	Environmental → Aquatic	2.11%
Human	Host-Associated → Human	0.42%
Modeled	Engineered → Modeled	0.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.66%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Roots	Host-Associated → Plants → Roots	1.69%
Sediment	Environmental → Aquatic → Sediment	0.42%
Floodplain	Environmental → Terrestrial → Floodplain	0.42%
Digestive System	Host-Associated → Human → Digestive System	0.42%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.28%
Loam	Environmental → Terrestrial → Soil → Loam	6.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.42%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.42%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.42%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.42%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.42%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.42%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.27%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.42%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.42%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.42%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.42%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030590	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F018019

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0465.00004330	2166559005	Simulated	MEIQPTVVDPAVFDKVKVGDKVDITWNTDVTVTVQ
F64_05274900	2170459011	Grass Soil	PNGWNYSRSVVDPTVFDKVKVGDKVDITWNTDVTVAMQ
F24TB_114802632	3300000550	Soil	ITFTGPNGWKYSRVVTDPNVLDMLKVGDKIDILWNTDVTVSVE*
F14TC_1044021212	3300000559	Soil	NGWQYSRRVVDPTVFDQVKVGDRIDITWNTDLVVSKE*
JGI1027J12803_1011476571	3300000955	Soil	KYSRHVVDPAVLDTLKVGDRVDITWSTDLKVSVE*
JGI10216J12902_1016459401	3300000956	Soil	SSISFEGPNGWKYSRRVVDPMVFAQVNVGDRVDIIWNTDLTVSVQ*
Ga0058891_15798172	3300004104	Forest Soil	ASSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVN*
Ga0062589_1010668541	3300004156	Soil	ISFEGPNGWKYSRRVVDPMVFAQVNVGDRVDIIWNTDLAVSVQ*
Ga0058860_102178855	3300004801	Host-Associated	VGPGGWKYSRHVVDPAVFEKIKVGDQADISWNTDLKVTVE*
Ga0062594_1010945562	3300005093	Soil	KGASSATFEAPNGWKYSRRVIDPAVFDKVKVGDKVDIIWNTDLTVSVK*
Ga0066388_1042666101	3300005332	Tropical Forest Soil	GPNGWKYSRRVVDPSILDKVKVGDKVDITWDTNVTVTMQ*
Ga0070675_1009654883	3300005354	Miscanthus Rhizosphere	ISFVGPNGWKYSRRVVDPTIFDKVKVGDMVDITWDTDLTVSVQ*
Ga0070675_1010691271	3300005354	Miscanthus Rhizosphere	GPNGWKYTRRIVDPTIFDKIKVGDQVDITWDSDLTVSVK*
Ga0070711_1004512333	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ*
Ga0070706_1015408851	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AITFVGPNGWKYSRRVVDPAVFDQVKVGDRVDITWNTDLSVSVE*
Ga0070707_1001372831	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ*
Ga0070697_1007916411	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FVGPNGWKYSRHIVDPTVLDKAKVGDKVDITWNTDVTVAVQ*
Ga0068859_1007800801	3300005617	Switchgrass Rhizosphere	IDKSTSSMTFVGPNGWKYSRRVVDPNVFDQVKAGDKVDITWSTDVNFAVQ*
Ga0068864_1010319142	3300005618	Switchgrass Rhizosphere	FEAPNGWKYSRRVVDPTVFDKVKVGDKVDIIWNTDLTVSVK*
Ga0068866_107587771	3300005718	Miscanthus Rhizosphere	SSISFEGVNGWKYSRRVVDPTVFDQVKVGDKVDITWSTDLSVLVE*
Ga0068863_1002218251	3300005841	Switchgrass Rhizosphere	SMTFVGPNQWKYSRRIVDPNVFDQVKVGDRVDITWGTELVLAVE*
Ga0068863_1021444692	3300005841	Switchgrass Rhizosphere	WKYSRRIVDPTVFDQVKAGDRVDITWSTDAAFVTE*
Ga0068858_1003112953	3300005842	Switchgrass Rhizosphere	IDKAASSMTFVGPNGWKYSRRIVDPTVFDQVKVGDKIDVTWSTDVTYVVQ*
Ga0068860_1018489041	3300005843	Switchgrass Rhizosphere	NGWKYSRRIVDPKVFDQVKVGDRVDITWSTDVTYVVQ*
Ga0068862_1001930174	3300005844	Switchgrass Rhizosphere	KYSRHVVDPAVFEKIKVGDQADISWNTDLKVTVE*
Ga0070717_117878382	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	NGWKYTRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ*
Ga0075028_1009017321	3300006050	Watersheds	GPNGWKYSRHVVDPTVFDKVKVGDKVDITWNTDVTVTVQ*
Ga0097621_1006560992	3300006237	Miscanthus Rhizosphere	GPNGWKYSRHVVDPAVLEKAKVGDAVDVTWNTDLKVTVE*
Ga0075421_1004028071	3300006845	Populus Rhizosphere	WKYSRHIVDPAVLDKVKVGDKVDITWNTDVTVAVQ*
Ga0075421_1009019113	3300006845	Populus Rhizosphere	FVGPNGWKYSRHVVDPAVFEKVKVGDQVDISWNTDLKVTVE*
Ga0075425_1017344243	3300006854	Populus Rhizosphere	GWKYSRHVVDPAVFEKVKVGDQADISWNTDLKVTVE*
Ga0075429_1000770411	3300006880	Populus Rhizosphere	TFVGPNGWKYSRHVVDPAVLEKVKIGDAVDVTWNTDLKVVVE*
Ga0068865_1015783871	3300006881	Miscanthus Rhizosphere	KTSSTIAVVGPNGWKYSRRIVDPTVLDKVKVGDQVDLTWNTDMTVSVQ*
Ga0068865_1019671502	3300006881	Miscanthus Rhizosphere	TSAITFVGPGGWKYSRHVVDPAVFEKIKVGDQADISWNTDLKVTVE*
Ga0075424_1002760614	3300006904	Populus Rhizosphere	GWKYSRHIVDPAVFDKVKVGDKVDIIWATDVTVSVQ*
Ga0111539_118302072	3300009094	Populus Rhizosphere	MTFVGPNGWKYSRHVVDPTVFEKVKVGDSVDITWNTDVTISVQ*
Ga0105245_124579131	3300009098	Miscanthus Rhizosphere	ATFEAPNGWKYSRRVVDPAVFDKVKVGDKVDIIWNTDLTVSVK*
Ga0075418_115871241	3300009100	Populus Rhizosphere	MVLASRRAGGRTVFNQVKVGDRVDIIWSTDLTVSVE*
Ga0105247_103192961	3300009101	Switchgrass Rhizosphere	ASMTFVGPNGWKYSRHVVDPAVLEKAKVGDAVDVTWNTDLKVVVE*
Ga0075423_121695081	3300009162	Populus Rhizosphere	GWKYSRHVVDPAVLEKAKVGDAVDVTWNTDLKVVVE*
Ga0105248_105706431	3300009177	Switchgrass Rhizosphere	SFVGPNGWKYSRRVVDPTIFDKVKVGDMVDITWDTDLTVSVQ*
Ga0105249_134528352	3300009553	Switchgrass Rhizosphere	SSITFVGPNGWKYSRRVVDQAVFDQVKTGDQVDITWNTDVTVMVE*
Ga0126382_121766851	3300010047	Tropical Forest Soil	AVTFVGPDGWKYSRHVVDPTVFNQLKVGDQIDVTWNTDLQVTVQ*
Ga0126319_16509601	3300010147	Soil	ASSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ*
Ga0127503_104681551	3300010154	Soil	SASSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ*
Ga0134128_130525731	3300010373	Terrestrial Soil	NGWKYSRRVVDPAVFDQVKVGDRVDIIWNTDLTVSVE*
Ga0105239_105570161	3300010375	Corn Rhizosphere	WKYSRRVVDPTVFDQVKVGDKVDITWSTDLSVLVE*
Ga0134126_111195172	3300010396	Terrestrial Soil	MTFVGPNGWKYSRRIVDPTVFDQVKVGDRVDITWSTDVTFVVE*
Ga0134124_121938372	3300010397	Terrestrial Soil	WRYSRRVADPTLLDKIKPGDKIDITWDTNVTLAPQ*
Ga0126383_129293372	3300010398	Tropical Forest Soil	ISFAGPNGWSYSRRVFDPTVLDQVKVGDKVDITWNIELKVPVE*
Ga0134127_109901002	3300010399	Terrestrial Soil	SAITFVGPGGWKYSRHVVDPAVFEKIKVGDQADISWNTDLKVTVE*
Ga0134127_115823473	3300010399	Terrestrial Soil	GPNGWKYSRHIVDPAVFDKVKVGDKVDITWATDVTVAVQ*
Ga0137364_104349391	3300012198	Vadose Zone Soil	GWKYTRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ*
Ga0150985_1137464862	3300012212	Avena Fatua Rhizosphere	ASSMTFVGPNGGKYSRRVVDPAVFNQVKTGDRVDITWSTDVNFAVQ*
Ga0157293_103305422	3300012898	Soil	SSMTFVGPNQWKYSRRIVDPKVFDQVKVGDRVDITWGTELILAVE*
Ga0157297_100441692	3300012914	Soil	FEGPNGWKYSRRVVDPMVFAQVNVGDRVDIIWNTDLAVSVQ*
Ga0164241_105096382	3300012943	Soil	SISFADQNGWKYTRRVVDPTVFDKVKVGDKVDITWNTDLTVAVN*
Ga0164301_104204462	3300012960	Soil	TFSGPNGWKYSRHVVDPTVFDKVKVGDKVDITWATDVTVAVQ*
Ga0164301_111284432	3300012960	Soil	VVGPNDWRYSRRVADPTLLDKIKPGDKIDITWDTNVTLAPQ*
Ga0157370_112615391	3300013104	Corn Rhizosphere	NGWKYSRRVIDPAVFDKVKVGDKVDIIWNTDLTVSVK*
Ga0157378_120132321	3300013297	Miscanthus Rhizosphere	TFVGPNGWKYSRRVVDPAVFDQVKVGDRVDITWNTDLTVSVE*
Ga0157375_129106741	3300013308	Miscanthus Rhizosphere	GPNGWKYSRRVVDPTVFDQVKVGDKVDITWNTDLTVLVE*
Ga0163163_103876702	3300014325	Switchgrass Rhizosphere	MTFVGPNAWKYSRRVVDPTVFDQVKVGDKVDITWSTEVNFAVQ*
Ga0163163_120766142	3300014325	Switchgrass Rhizosphere	EGPNGWKYSRRVVDPEVFAQVKVGDRVDIVWNTDLTVTKAS*
Ga0163163_131375761	3300014325	Switchgrass Rhizosphere	FAGPSGWKYSRQVVDPTVFDKVKVGDKVDITWNTDVTVSVN*
Ga0157380_100097699	3300014326	Switchgrass Rhizosphere	WKYSRRVVDPKVFDQVKVGDRVDITWSTEVNFAVQ*
Ga0157380_106256501	3300014326	Switchgrass Rhizosphere	SMTFVGPNGWKYSRHVVDPAVLEKAKVGDAVDVTWNTDLKVTVE*
Ga0157379_101510641	3300014968	Switchgrass Rhizosphere	NGWKYSRRVVDPMAFDQVKVGDRVDITWSTEVNFAVQ*
Ga0157376_101062663	3300014969	Miscanthus Rhizosphere	TSSISFEGVNGWKYSRRVVDPTVFDQVKVGDKVDITWSTDLSVLVE*
Ga0157376_102544961	3300014969	Miscanthus Rhizosphere	TIAEVDKSASSMTFVGANGWKYSRRVVDPKVFDQVKVGDRVDITWSTEVNFAVQ*
Ga0157376_112250482	3300014969	Miscanthus Rhizosphere	VGPNGWKYSRRIVDPTVFDQVKAGDRVDITWSTDAAFVTE*
Ga0132258_102679383	3300015371	Arabidopsis Rhizosphere	SMTFVGPNDWKYSRRIVDPKVFDQVKVGDRVDITWSTDLVIAVE*
Ga0132258_109418263	3300015371	Arabidopsis Rhizosphere	WKYSRRVVDPTVFDQVKVGDRVDITWNTDLTVSVE*
Ga0132258_118778213	3300015371	Arabidopsis Rhizosphere	SISFQGPNGWKYSRRVVDPQVFDQVKVGDKVDIVWSTDLTVAVE*
Ga0132258_138366551	3300015371	Arabidopsis Rhizosphere	STSSMTVVGPNGWKYSRDVVDPTVFDKVKVGDSVDITWNTDVTVSVQ*
Ga0132256_1010113761	3300015372	Arabidopsis Rhizosphere	WKYSRRVLDPTVLDKVNVGDRVDIIWSTDVTVTAN*
Ga0132256_1013647041	3300015372	Arabidopsis Rhizosphere	GWKYSRRVVDPTVLDKTNVGDQVDITWDTSVTVSVQ*
Ga0132257_1039447941	3300015373	Arabidopsis Rhizosphere	STSSMTVVGPNGWKYSRDVVDPTVFDKVKVGDQVDISWNTDLTVKVE*
Ga0132255_1033787341	3300015374	Arabidopsis Rhizosphere	GWKYSRRVVDPTVFNQVKVGDKVDIIWSTDLTVSVE*
Ga0182036_109097852	3300016270	Soil	ITGTGPSGWKGSRRVGDPAGREKLKVGDQVDITWDTNVTVAVQ
Ga0182041_102746131	3300016294	Soil	SAQSITFTGPNGWNYSRRVADPTVLDKIKVGDQVDITWDTSVTVAVQ
Ga0182041_111591533	3300016294	Soil	MKYDRRVVDPTVLDKLKVGDQVDITWDTNVTVSVQ
Ga0182041_122462521	3300016294	Soil	TFVGPNGWKYSRRVVDPSILDKVKVGDKVDITWSTDVTVTVN
Ga0182033_101580124	3300016319	Soil	GPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0182035_104390461	3300016341	Soil	SITFTGPNGWKYSRRVVDPTVLDKVKVGDQVDVTWDTDVTVSVQ
Ga0182035_107702682	3300016341	Soil	SITFTGPNGWKYSRRVVDPTVLDKVKVGDQVDVTWDTDVTVAVQ
Ga0182035_120397321	3300016341	Soil	NGWKYSRHIVDPAVFDKVKAGDKIDITWDADTTMSVEKP
Ga0182032_114523991	3300016357	Soil	ASSVSFTGPNGWKYERHVVDPTVLDKLKVDITWDTNVTVAVQ
Ga0182034_102427413	3300016371	Soil	ASSITFTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0182034_102547391	3300016371	Soil	SITFTGPNGWKYSRRVVDPTVLDKLKVGDQVDITWDTNVTVAVQ
Ga0182034_108515421	3300016371	Soil	PNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0182034_119480782	3300016371	Soil	FVGPNGWKYSRHVVDPAVCDKVKAGDKIDITWDADATMSVEKP
Ga0182040_101743422	3300016387	Soil	PSITFTGPNGWKYDRRVADPTVLDKIKVGDQVDITWDTNVTVAVQ
Ga0182040_104871871	3300016387	Soil	SASSVSFTGPNGWKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0182040_110999593	3300016387	Soil	SASSVSFTGPNGWKYERRVVDPTVLDKLKVGDLVTITWNTDVTVAVQ
Ga0182040_111205281	3300016387	Soil	ITFTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0182040_114086921	3300016387	Soil	ITFTGPNGWKYSPRAVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0182037_109578502	3300016404	Soil	GWNYSRRVADPTVLDKIKVGDQVDITWDTSVTVAVQ
Ga0182039_101672561	3300016422	Soil	ASSITFTGPNGWKYSRRVVDPTVLDKLKVGDQVDITWDTNVTVAVQ
Ga0182039_104010603	3300016422	Soil	ASSISFAGPNGWKYSRRVVDPAVLDKVKVGDKVDITSDTNVTVSVQ
Ga0163161_102294775	3300017792	Switchgrass Rhizosphere	GVNGWKYSRRVVDPTVFDQVKVGDKVDITWSTDLSVLVE
Ga0163161_109457331	3300017792	Switchgrass Rhizosphere	NGWKYSRHVVDPTVFDKVKVGDSVDITWNTDVTVSVQ
Ga0163161_111698183	3300017792	Switchgrass Rhizosphere	GVNGWKYSRRVVDPTVFDQVKVGDKVDITWSTNLSVLVE
Ga0187814_102602241	3300017932	Freshwater Sediment	PSITFVGPNGWKYSRHIVDPAVLNNLKVGDKVDITWNTDVTVAVQ
Ga0190270_108443501	3300018469	Soil	KSASSVTFEGPNGWKYSRRVVDPTVFDKIKVGDKVDIVWNTDLTVSVK
Ga0190270_114454952	3300018469	Soil	VGPNGWKYSRKVVDPTVLDNIKIGDRVDITWNTDVTIAVK
Ga0190274_113654132	3300018476	Soil	AGSNGWKYTRRVVDPTVFDKVKVGDKVDITWITDITVTVN
Ga0173481_108681962	3300019356	Soil	GVNTWKYSRHVVDPAVLEKVKVGDQVDISWNTDLKVTVE
Ga0210403_109013101	3300020580	Soil	GPNGWKYSRHIVDPAVFDKLKVGDKVDITWNTDVTVAVQ
Ga0210401_115386222	3300020583	Soil	FTGPNGWKYDRRVVDPAVLDKIKPGDKVDITWSTDVTVAVQ
Ga0210393_101219731	3300021401	Soil	KSTSSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0210397_105095281	3300021403	Soil	WKYSRHIVDPTVFDKVKVGDKVDITWNTDVTVAVQ
Ga0210397_108413171	3300021403	Soil	LDRGTSSISFEGVNGWKYSRRVVDPVVFDQVKVGDKVDITWNTELKISSQ
Ga0210387_104864363	3300021405	Soil	ASAITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0210390_115922311	3300021474	Soil	SITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0210392_107927802	3300021475	Soil	SMTFSGPNGWKYSRHIVDPTVFDKVKVGDKVDITWNTDVTVAVQ
Ga0242648_10074113	3300022506	Soil	ITFVGPNGWKYSRHIVDPAVFDKLKVGDKVDITWNTDVTVAVQ
Ga0242656_10703601	3300022525	Soil	TFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0242662_100095071	3300022533	Soil	VGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0242662_100897801	3300022533	Soil	TFVGPNGFKYSRHVVDPAVFDQVKVGDKVDISWRTGVTFSVE
Ga0242662_100911891	3300022533	Soil	GPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0242653_10689052	3300022712	Soil	SSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0242654_103485092	3300022726	Soil	ASSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0242654_104365541	3300022726	Soil	FVGPNGWKYSRHIVDPSVIDKVKVGDKVDITWYTDVTVAVQ
Ga0207697_102001892	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	SEIDKGSSSMTFVGPNQWKYSRRIVDPNVFDQVKVGDRVDITWGTELVLAVE
Ga0207642_111115261	3300025899	Miscanthus Rhizosphere	VGPNQWKYSRRIVDPKVFDQVKVGDRVDITWGTELILAVE
Ga0207688_104359972	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	SEIDKGASSMTFVGPNSWKYSRRIVDPMVFDQVKVGDKVDITWSTDVTFAVE
Ga0207680_101430914	3300025903	Switchgrass Rhizosphere	SMTFVGANGWKYSRRVVDPKVFDQVKVGDRVDITWSTEVNFAVQ
Ga0207645_109292761	3300025907	Miscanthus Rhizosphere	GPNGWKYSRRIVDPTVFDQVKVGDRVDITWSTDAAFVTE
Ga0207645_109800611	3300025907	Miscanthus Rhizosphere	IDKAASSMTFVGPNGWKYSRRIVDPTVFDQVKVGDKIDVTWSTDVTYVVQ
Ga0207643_106857772	3300025908	Miscanthus Rhizosphere	KSSSSISFAGPNGWKYTRRVVEPAVFDKVKVGDKVDITWNTDVTVAME
Ga0207643_107345651	3300025908	Miscanthus Rhizosphere	TFVGPNGWKYSRRIVDPKVFDQVKVGDKVDVTWSTDVTYVVE
Ga0207684_104606621	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0207684_107936802	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0207659_101128834	3300025926	Miscanthus Rhizosphere	GPNDWKYSRRIVDPKVFDQVKVGDKVDITWSTDLTIDVN
Ga0207701_106125751	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TFEAPNGWKYSRRVVDPAVFDKVKVGDKVDIIWNTDLTVSVK
Ga0207706_108659252	3300025933	Corn Rhizosphere	IDKANSSMTFVGPNDWKYSRRIVDPKVFDQVKVGDKVDITWSTDLTIDVN
Ga0207706_112554191	3300025933	Corn Rhizosphere	TFVGPNGWKYSRRIVDPKVFDQVKVGDRVDVTWSTDVTFAVE
Ga0207670_112537751	3300025936	Switchgrass Rhizosphere	GPNQWKYSRRIVDPKVFDQVKVGDRVDITWGTELILAVE
Ga0207669_101670661	3300025937	Miscanthus Rhizosphere	DRNASSISFEGPNGWKYSRRVVDPMVFAQVNVGDRVDIIWDTDLTVSVQ
Ga0207669_111449872	3300025937	Miscanthus Rhizosphere	TFVGPNGWKYSRRIVDPKVFDQVKVGDRVDITWSTDVTYVVQ
Ga0207711_112128411	3300025941	Switchgrass Rhizosphere	VGPNGWKYSRRIVDPKVFDQVKVGDRVDITWSTDVTYVVQ
Ga0207651_100200321	3300025960	Switchgrass Rhizosphere	DKGSSSMTFVGPNQWKYSRRIVDPNVFDQVKVGDRVDITWGTELVLAVE
Ga0207640_118807161	3300025981	Corn Rhizosphere	NASSISFEGPNGWKYSRRVVDPMVFAQVNVGDRVDIIWNTDLAVSVQ
Ga0207658_121730942	3300025986	Switchgrass Rhizosphere	DKGTSSMTFVGPNAWKYSRRVVDPTVFDQVKVGDKVDITWSTEVNFAVQ
Ga0207677_102833112	3300026023	Miscanthus Rhizosphere	EAPNGWKYSRRVIDPAVFDKVKVGDKVDIIWNTDLTVSVK
Ga0207678_108530502	3300026067	Corn Rhizosphere	ATFEAPNGWKYSRRVIDPAVFDKVKVGDKVDIIWNTDLTVSVK
Ga0207708_102579641	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ASSMTFVGPNGWKYSRRIVDPTVFDQVKVGDKIDVTWSTDVTYVVQ
Ga0207676_114810271	3300026095	Switchgrass Rhizosphere	FEAPNGWKYSRRVVDPTVFDKVKVGDKVDIIWNTDLTVSVK
Ga0207675_1026383962	3300026118	Switchgrass Rhizosphere	SMTFVGPNDWKYSRRIVDPMVFDQVKVGDKVDITWSTDLTIDVN
Ga0207683_110422251	3300026121	Miscanthus Rhizosphere	SSMTFVGPNGWKYSRRIVDPTVFDQVKVGDKIDVTWSTDVTYVVQ
Ga0209447_100919322	3300027701	Bog Forest Soil	NASSITFVGPNGWKYSRHIVDPDVLDKVKVGDKVDITWNTDVTVAVQ
Ga0209328_100347204	3300027727	Forest Soil	ASSITFIGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0209811_101240221	3300027821	Surface Soil	SSISFEGPNGWKYSRRVVDPTVFNQVKVGDKVDIIWSTDLTVSVE
Ga0207428_104540851	3300027907	Populus Rhizosphere	SFAGPNGFKYTRRVVDPTVFDKVKVGDKVDISWNTDIAVKVN
Ga0209526_106914531	3300028047	Forest Soil	TSSITFVGPNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0247824_104369902	3300028809	Soil	VGPNGWKYSRHVVDPAVLEKVKIGDAVDVTWNTDLKVVVE
Ga0222749_107529481	3300029636	Soil	NGWKYTRHIVDPTVLDKVKVGDKVDITWNTDVTVAVQ
Ga0247643_11946592	3300030590	Soil	VTFEGPNGWKYSRRVVDPTVFDKIKVGDKVDIIWNTDLTVSVK
Ga0265460_111923522	3300030740	Soil	PNGWKYSRHIVDPAVLNNLKVGDKVDITWNTDVTVAVQ
Ga0075377_116967011	3300030844	Soil	TSSITFAGPNGWKYSRRVVDPTVFDKVKVGDKVDITWNTDVTVAVN
Ga0138296_17587193	3300030923	Soil	WKYSRHVADPAVFEKVKVGDQVDVTWNTDLKVSVQ
Ga0170834_1028856782	3300031057	Forest Soil	PNGFKYTRRVVDPDVLDKVKVGDQVDITWNTDLTVSVEEPVSEE
Ga0170834_1053105473	3300031057	Forest Soil	SAPSITFVGPNGFKYTRRVVDPDVLEKVKVGDQVDITWNTDLKVSVE
Ga0307497_105144642	3300031226	Soil	FEAPNGWKYSRRVVDPAVYDKVKVGDKVDIIWNTDLTVSVK
Ga0170824_1103764293	3300031231	Forest Soil	PNGFKYSRLVVDPTVFDQVKVGDKVDITWNTDVTFSVDN
Ga0170824_1150612583	3300031231	Forest Soil	PNGWKYSRRVVDPTVFDKVKVGDKVDISWNTDVTVKVN
Ga0170824_1227426952	3300031231	Forest Soil	FVGPNGFKYSRHVVDPAVFVKVKVGDKVDINWNTDLTISVE
Ga0170824_1237167992	3300031231	Forest Soil	PNGWKYSRHIVDPTVLDKVKVGDKVDITWNTDVAVAVQ
Ga0170824_1279352822	3300031231	Forest Soil	NGFKYTRRVVDPDVLDKVKVGDQVDITWNTDLKVSVE
Ga0170824_1288008691	3300031231	Forest Soil	SGPNGWKYSQHIVDPSVFDKVKVGDKIDITWNTDVTVTVN
Ga0170820_128680122	3300031446	Forest Soil	TFVGPNGFKYTRRVVDPDVLEKVKVGDQVDITWNTDLKVSVE
Ga0170819_111300372	3300031469	Forest Soil	PNGWKYSRHIVDPTVFDKVKVGDTVDITWNTDITVAVN
Ga0170818_1095070223	3300031474	Forest Soil	WKYSRHIVDPTVLDKVKVGDKVDITWNTDVTVAVN
Ga0170818_1126875041	3300031474	Forest Soil	SMTFVGPNGWKYSRRIVDPAVFDQVKLGDKVDITWSTDVTYTVQ
Ga0170818_1153808083	3300031474	Forest Soil	APSITFVGPNGFKYTRRVVDPDVLDKVKVGDQVDITWNTDVTVAVQ
Ga0318516_104305872	3300031543	Soil	APSITFTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0318541_103267341	3300031545	Soil	PSITYTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0318541_105497983	3300031545	Soil	TFTGPNGWKYSRRVVDPTVLDKGKVGDQVDITWDTNVTVAVQ
Ga0318538_106262971	3300031546	Soil	RPSGWKYSRRVLDPTVLDKIKVGDQVDITWDTNVTVAVQ
Ga0310887_105826661	3300031547	Soil	KGASSMTFVGPNSWKYSRRIVDPMVFDQVKVGDKVDITWSTDVTFAVE
Ga0318515_100831953	3300031572	Soil	PNGWKYSRRVVDPSVLDKVKVGDQVDITWDTDVTVAVQ
Ga0318572_103541213	3300031681	Soil	TFTGPNGWKYSRRVLDPTVLDKVKVGDQVDITWDTDVAVAVQ
Ga0307469_105991674	3300031720	Hardwood Forest Soil	GPNGWKYSRRVVDPAVFDQVKVGDRVDITWNTDLSVSVE
Ga0307469_106069174	3300031720	Hardwood Forest Soil	SFVGPNDWKYSRRVVDPTVFDQVKVGDKVDITWNTDLTVAVQ
Ga0318500_102952951	3300031724	Soil	TFTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0307468_1003033962	3300031740	Hardwood Forest Soil	WQYSRRVVDPTVFDQVKVGDRIDITWNTDLVVSKE
Ga0307468_1019871851	3300031740	Hardwood Forest Soil	SSVSFEAPNGWKYSRRVVDPTVFDKIKVGDKVDITWNTDLTVSVE
Ga0318492_108041081	3300031748	Soil	SITFTGPNGWKYSRRVADPTVLDKIKVGDQVDITWDTNVTVAVQ
Ga0318509_102158911	3300031768	Soil	GPNGWKYSRHIVDPSVFDKVKVGDKLDITWDADTTLSVEKP
Ga0318529_104962602	3300031792	Soil	WKYDRRVADPTVLDKVKVGDQADITWDTNVTVAVQ
Ga0318576_106256411	3300031796	Soil	ASSVFTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDPNVTVSVQ
Ga0318523_102532421	3300031798	Soil	FTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0307478_111406011	3300031823	Hardwood Forest Soil	ASSITFVGPNGWKYSRHIVDPTVLDRVKVGDKVDITWNTDVTVAVQ
Ga0307478_114875571	3300031823	Hardwood Forest Soil	TFVGPNVWKYSRHIVDPAVFDKLKVGDKVDITWNTDVTVAVQ
Ga0318499_103253941	3300031832	Soil	TGPNGWKYDRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0310917_106664882	3300031833	Soil	WKYERRVVDPTVLDKLKVGDQVDITWDTNVTVAVQ
Ga0306919_100848364	3300031879	Soil	TGPNGWKYSRRVVDPSVLDKVKVGDQVDITWDTDVTVAVQ
Ga0306919_101328793	3300031879	Soil	GPNGWNYSRRVADPTVLDKIKVGDQVDITWDTSVTVAVQ
Ga0306919_112159292	3300031879	Soil	GPNGWKYSRRVVDPTVLDKGKVGDQVDITWDTNVTVAVQ
Ga0318544_100064631	3300031880	Soil	GPNGWKYDRRAVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0306925_102629064	3300031890	Soil	GPNGWKYDRRVADPTVLDKVKVGDQADITWDTNVTVAVQ
Ga0306925_104866733	3300031890	Soil	NGWKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0306925_104923561	3300031890	Soil	WKYSRRVVDPTVLDKVKVGDQVDITWDPNVTVSVQ
Ga0306925_115776002	3300031890	Soil	FTGPNGWKYERRVVDPTVLDKLKVGDQVDITWDTNVTVAVQ
Ga0318522_102125551	3300031894	Soil	TGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0306923_100767839	3300031910	Soil	TGPNGWKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0306923_108273141	3300031910	Soil	HLHWSEGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0306921_105150223	3300031912	Soil	IDKSASSVSFTGPNGWKYERHVVDPTVLDKLKVDITWDTNVTVAVQ
Ga0306921_114928361	3300031912	Soil	FTGPNGWKYDRRVADPTVLDQVKVGDQVDITWDTNVTVAVQ
Ga0306921_120120181	3300031912	Soil	PNGWKYERRVVDPTVLDKVKVGDQVDITWDTNVTVAIQ
Ga0306921_123838302	3300031912	Soil	NASSITFTGPNGWKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVSVQ
Ga0310916_114612281	3300031942	Soil	FTGPNGWKYSRRVVDPTVLDKIKVGDQVDITWDTNVTVAVQ
Ga0310913_106801822	3300031945	Soil	GWKYSRRVVDPTVLDKIKVGDLVDITWDTDVTVSVQ
Ga0310913_108252771	3300031945	Soil	WKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0310913_112444472	3300031945	Soil	NGWKYERRVVEPTVLDKVKVGDQVDVTWDTNVTVSVQ
Ga0310910_101283864	3300031946	Soil	PNGWKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0310910_112080951	3300031946	Soil	WKYSRRVVDPTVLDKVKVGDQVDITWDTNVTVSVQ
Ga0310909_108732191	3300031947	Soil	RMKYDRRVVDPTVLDKLKVGDQVDITWDTNVTVSVQ
Ga0306922_102223941	3300032001	Soil	NGWKYSRRFVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0310911_100577441	3300032035	Soil	GWKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0318558_103384981	3300032044	Soil	SITFTGPNGWKYGRRVADPTVLDQVKVGDQVDITWDTNVTVAVQ
Ga0318575_106446521	3300032055	Soil	TFTGPNGWKYDRRVVDPTVLDKVKVGDQVDITWDTNVTVAVQ
Ga0318510_101705412	3300032064	Soil	FTRPSGWKYSRRVLDPTVLDKIKVGDQVDITWDTNVTVAVQ
Ga0318513_105597241	3300032065	Soil	KSAQSITFTGPNGWKYSRRVVDPAVLDKVKVGDKVDITSDTSVTIAVQ
Ga0306924_101591964	3300032076	Soil	MTTTITGIDPAVLDKVKVGDQVDITWDTNVTVAVQ
Ga0306924_115326421	3300032076	Soil	GPNGWKYERRVVDPTVLDKLKVGDQVDITWDTNVTVAVQ
Ga0306924_117564821	3300032076	Soil	NGWKYSRRVVDPTVLDKLKVGDLVDITWDTDVTVAVQ
Ga0318577_104455072	3300032091	Soil	NGWKYSRRVVDPTGLEKLKVGDQVDITWDTSVTVAVQ
Ga0307471_1031473651	3300032180	Hardwood Forest Soil	SASSMTFVASYGWKYSRRIVDPKVFDQVKVGDKVDITWSTEVNFAVQ
Ga0306920_1006973294	3300032261	Soil	FTGPNGWKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0306920_1015222071	3300032261	Soil	GPNGWKYERRVVDPTVLDKLKVGDLVDITWNTDVTVAVQ
Ga0306920_1024102832	3300032261	Soil	FTGPNGWKYSRRVVDPAVLDKVKVGDQVDITWDTNVTVAVQ
Ga0310811_107023352	3300033475	Soil	ISFEGVNGWKYSRRVVDPTVFDQVKVGDKVDITWSTDLSVLVE
Ga0247830_111675761	3300033551	Soil	KSTSSMTFVGPNGWKYSRHVVDPAVLEKAKVGDAVDVTWNTDLKVVVE
Ga0364929_0121323_1_123	3300034149	Sediment	VGPNGWKYSRRVVDPAVFNQVKVGDRVDITWNTDLTVSVN
Ga0314793_131603_424_549	3300034668	Soil	FVGPGGWKYSRHVVDPAVFDKVKVGDQVDISWNTDLKVTVE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign