Metagenome / Metatranscriptome Family F021978

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F021978
Family Type	Metagenome / Metatranscriptome
Number of Sequences	216
Average Sequence Length	54 residues
Representative Sequence	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Number of Associated Samples	154
Number of Associated Scaffolds	216

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.31 %
% of genes near scaffold ends (potentially truncated)	29.17 %
% of genes from short scaffolds (< 2000 bps)	77.31 %
Associated GOLD sequencing projects	140
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.389 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (15.278 % of family members)
Environment Ontology (ENVO)	Unclassified (33.796 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (42.593 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.10% β-sheet: 0.00% Coil/Unstructured: 36.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 216 Family Scaffolds
PF00326	Peptidase_S9	18.06
PF13649	Methyltransf_25	5.56
PF00027	cNMP_binding	4.17
PF00578	AhpC-TSA	3.70
PF02163	Peptidase_M50	1.85
PF07676	PD40	1.85
PF13545	HTH_Crp_2	1.39
PF01894	UPF0047	0.93
PF00166	Cpn10	0.93
PF06463	Mob_synth_C	0.93
PF00982	Glyco_transf_20	0.46
PF13659	Obsolete Pfam Family	0.46
PF05175	MTS	0.46
PF08713	DNA_alkylation	0.46
PF00877	NLPC_P60	0.46
PF04945	YHS	0.46
PF13508	Acetyltransf_7	0.46
PF08241	Methyltransf_11	0.46
PF13098	Thioredoxin_2	0.46
PF08240	ADH_N	0.46
PF03881	Fructosamin_kin	0.46
PF02653	BPD_transp_2	0.46

COG ID	Name	Functional Category	% Frequency in 216 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.93
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.93
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.46
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.46
COG3001	Fructosamine-3-kinase	Carbohydrate transport and metabolism [G]	0.46
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	0.46

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.39 %
Unclassified	root	N/A	23.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.39 %
Unclassified	root	N/A	23.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.39 %
Unclassified	root	N/A	23.61 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.31 %
Unclassified	root	N/A	23.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.85 %
Unclassified	root	N/A	23.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.46 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.48 %
Unclassified	root	N/A	23.61 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.46 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	29.63 %
Unclassified	root	N/A	23.61 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.46 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.63 %
Unclassified	root	N/A	23.61 %
Euzebyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae	0.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.46 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.63 %
Unclassified	root	N/A	23.61 %
Euzebya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya	0.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.46 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig515041	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101788245	All Organisms → cellular organisms → Bacteria	11755	Open in IMG/M
3300000858\|JGI10213J12805_10310482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300000858\|JGI10213J12805_10554154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1542	Open in IMG/M
3300000956\|JGI10216J12902_100539313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5745	Open in IMG/M
3300002120\|C687J26616_10098519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300002149\|C687J26657_10054780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	846	Open in IMG/M
3300002243\|C687J29039_10031244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2123	Open in IMG/M
3300002243\|C687J29039_10182291	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300003995\|Ga0055438_10182989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300004156\|Ga0062589_100254001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1320	Open in IMG/M
3300004463\|Ga0063356_101373463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300004479\|Ga0062595_100777789	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300004480\|Ga0062592_102108356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya	560	Open in IMG/M
3300004643\|Ga0062591_100304212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300005093\|Ga0062594_100150598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1523	Open in IMG/M
3300005093\|Ga0062594_100262383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1276	Open in IMG/M
3300005093\|Ga0062594_100664753	Not Available	931	Open in IMG/M
3300005105\|Ga0066812_1000532	Not Available	1424	Open in IMG/M
3300005331\|Ga0070670_100073549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2935	Open in IMG/M
3300005332\|Ga0066388_101111309	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300005438\|Ga0070701_10217731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300005444\|Ga0070694_100028644	All Organisms → cellular organisms → Bacteria	3625	Open in IMG/M
3300005471\|Ga0070698_100883904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300005713\|Ga0066905_101377890	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005713\|Ga0066905_102223965	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005844\|Ga0068862_100801344	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300005937\|Ga0081455_10001005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35749	Open in IMG/M
3300005937\|Ga0081455_10001128	All Organisms → cellular organisms → Bacteria	33411	Open in IMG/M
3300005937\|Ga0081455_10011872	All Organisms → cellular organisms → Bacteria	8722	Open in IMG/M
3300006049\|Ga0075417_10514451	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300006572\|Ga0074051_10001031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1503	Open in IMG/M
3300006581\|Ga0074048_13374320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1940	Open in IMG/M
3300006844\|Ga0075428_100018995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7602	Open in IMG/M
3300006844\|Ga0075428_100073718	All Organisms → cellular organisms → Bacteria	3729	Open in IMG/M
3300006844\|Ga0075428_100213870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2083	Open in IMG/M
3300006844\|Ga0075428_100396303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1480	Open in IMG/M
3300006845\|Ga0075421_100145431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2964	Open in IMG/M
3300006847\|Ga0075431_101731257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300006865\|Ga0073934_10000755	All Organisms → cellular organisms → Bacteria	87208	Open in IMG/M
3300006865\|Ga0073934_10007339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15418	Open in IMG/M
3300006865\|Ga0073934_10070310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2849	Open in IMG/M
3300006865\|Ga0073934_10323482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	977	Open in IMG/M
3300006969\|Ga0075419_10845631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	657	Open in IMG/M
3300009081\|Ga0105098_10034072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2014	Open in IMG/M
3300009087\|Ga0105107_10471912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300009087\|Ga0105107_10731069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300009094\|Ga0111539_11080860	Not Available	932	Open in IMG/M
3300009094\|Ga0111539_11363236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300009157\|Ga0105092_10470586	Not Available	719	Open in IMG/M
3300009168\|Ga0105104_10012861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5176	Open in IMG/M
3300009168\|Ga0105104_10202199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300009610\|Ga0105340_1051453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1608	Open in IMG/M
3300009678\|Ga0105252_10319078	Not Available	697	Open in IMG/M
3300009789\|Ga0126307_10504347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	977	Open in IMG/M
3300009809\|Ga0105089_1102955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300009811\|Ga0105084_1080178	Not Available	601	Open in IMG/M
3300009813\|Ga0105057_1060114	Not Available	642	Open in IMG/M
3300009817\|Ga0105062_1001256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3019	Open in IMG/M
3300009819\|Ga0105087_1036195	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300009821\|Ga0105064_1028840	Not Available	1038	Open in IMG/M
3300009821\|Ga0105064_1034057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	959	Open in IMG/M
3300009837\|Ga0105058_1027675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1215	Open in IMG/M
3300009837\|Ga0105058_1174253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300009837\|Ga0105058_1192802	Not Available	507	Open in IMG/M
3300010029\|Ga0105074_1119214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300010041\|Ga0126312_10405410	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300010362\|Ga0126377_10001046	All Organisms → cellular organisms → Bacteria	17734	Open in IMG/M
3300010399\|Ga0134127_11949576	Not Available	665	Open in IMG/M
3300011119\|Ga0105246_11602555	Not Available	615	Open in IMG/M
3300011398\|Ga0137348_1011121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1354	Open in IMG/M
3300011412\|Ga0137424_1117984	Not Available	553	Open in IMG/M
3300011420\|Ga0137314_1061436	Not Available	910	Open in IMG/M
3300011429\|Ga0137455_1264252	Not Available	506	Open in IMG/M
3300011439\|Ga0137432_1155837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300011445\|Ga0137427_10320416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012040\|Ga0137461_1207991	Not Available	574	Open in IMG/M
3300012159\|Ga0137344_1029856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300012360\|Ga0137375_10535966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	988	Open in IMG/M
3300012360\|Ga0137375_11343038	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012905\|Ga0157296_10075315	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012948\|Ga0126375_12065519	Not Available	505	Open in IMG/M
3300013306\|Ga0163162_10635959	Not Available	1191	Open in IMG/M
3300013308\|Ga0157375_10841855	Not Available	1064	Open in IMG/M
3300014318\|Ga0075351_1209339	Not Available	501	Open in IMG/M
3300014320\|Ga0075342_1085667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300014965\|Ga0120193_10091019	Not Available	519	Open in IMG/M
3300014969\|Ga0157376_12480138	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300015371\|Ga0132258_12376831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1328	Open in IMG/M
3300017792\|Ga0163161_11944605	Not Available	523	Open in IMG/M
3300017997\|Ga0184610_1003602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3574	Open in IMG/M
3300017997\|Ga0184610_1005185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3077	Open in IMG/M
3300017997\|Ga0184610_1030276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1515	Open in IMG/M
3300018000\|Ga0184604_10023069	Not Available	1500	Open in IMG/M
3300018028\|Ga0184608_10280813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300018028\|Ga0184608_10393818	Not Available	603	Open in IMG/M
3300018031\|Ga0184634_10028577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2189	Open in IMG/M
3300018031\|Ga0184634_10031466	Not Available	2102	Open in IMG/M
3300018031\|Ga0184634_10156026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300018031\|Ga0184634_10461613	Not Available	571	Open in IMG/M
3300018051\|Ga0184620_10168182	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300018052\|Ga0184638_1012833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2872	Open in IMG/M
3300018052\|Ga0184638_1094567	Not Available	1096	Open in IMG/M
3300018053\|Ga0184626_10065782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1524	Open in IMG/M
3300018054\|Ga0184621_10328611	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300018055\|Ga0184616_10158796	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300018056\|Ga0184623_10005637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5339	Open in IMG/M
3300018056\|Ga0184623_10072768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1582	Open in IMG/M
3300018056\|Ga0184623_10076523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1541	Open in IMG/M
3300018056\|Ga0184623_10191258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300018056\|Ga0184623_10215740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300018056\|Ga0184623_10300454	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300018063\|Ga0184637_10010387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5604	Open in IMG/M
3300018072\|Ga0184635_10019106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2495	Open in IMG/M
3300018072\|Ga0184635_10044824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1697	Open in IMG/M
3300018076\|Ga0184609_10013780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3077	Open in IMG/M
3300018077\|Ga0184633_10192326	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300018077\|Ga0184633_10304781	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300018078\|Ga0184612_10009569	All Organisms → cellular organisms → Bacteria	4889	Open in IMG/M
3300018078\|Ga0184612_10483697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300018079\|Ga0184627_10274953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300018082\|Ga0184639_10357288	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300018083\|Ga0184628_10240316	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300018466\|Ga0190268_10081586	Not Available	1429	Open in IMG/M
3300018466\|Ga0190268_11928300	Not Available	539	Open in IMG/M
3300018469\|Ga0190270_10370028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1312	Open in IMG/M
3300018469\|Ga0190270_10406667	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300018469\|Ga0190270_10976598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300018469\|Ga0190270_11588226	Not Available	705	Open in IMG/M
3300018476\|Ga0190274_10012027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5411	Open in IMG/M
3300019233\|Ga0184645_1230155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300019249\|Ga0184648_1343167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300019884\|Ga0193741_1009685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2528	Open in IMG/M
3300019884\|Ga0193741_1040831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1197	Open in IMG/M
3300019884\|Ga0193741_1085461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300020003\|Ga0193739_1068813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300021081\|Ga0210379_10009870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3496	Open in IMG/M
3300021510\|Ga0222621_1119925	Not Available	559	Open in IMG/M
3300021510\|Ga0222621_1146528	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300022195\|Ga0222625_1198094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1229	Open in IMG/M
3300022756\|Ga0222622_10143832	Not Available	1529	Open in IMG/M
3300025155\|Ga0209320_10043309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2149	Open in IMG/M
3300025159\|Ga0209619_10315549	Not Available	829	Open in IMG/M
3300025164\|Ga0209521_10011608	All Organisms → cellular organisms → Bacteria	6572	Open in IMG/M
3300025167\|Ga0209642_10000897	All Organisms → cellular organisms → Bacteria	19531	Open in IMG/M
3300025167\|Ga0209642_10200413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1150	Open in IMG/M
3300025310\|Ga0209172_10001797	All Organisms → cellular organisms → Bacteria	42389	Open in IMG/M
3300025310\|Ga0209172_10011162	All Organisms → cellular organisms → Bacteria	7823	Open in IMG/M
3300025313\|Ga0209431_10218643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1504	Open in IMG/M
3300025313\|Ga0209431_10681143	Not Available	762	Open in IMG/M
3300025319\|Ga0209520_10814201	Not Available	512	Open in IMG/M
3300025322\|Ga0209641_10557255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300025322\|Ga0209641_10570078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300025325\|Ga0209341_10076535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2829	Open in IMG/M
3300025325\|Ga0209341_10724550	Not Available	763	Open in IMG/M
3300025901\|Ga0207688_10431026	All Organisms → cellular organisms → Bacteria → Terrabacteria group	820	Open in IMG/M
3300025922\|Ga0207646_11206909	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300025925\|Ga0207650_11812160	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026035\|Ga0207703_11158786	Not Available	743	Open in IMG/M
3300026088\|Ga0207641_12237727	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300026827\|Ga0207591_103485	Not Available	704	Open in IMG/M
3300026878\|Ga0208891_1003526	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300026894\|Ga0207980_1004386	Not Available	877	Open in IMG/M
3300027006\|Ga0209896_1000513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3220	Open in IMG/M
3300027056\|Ga0209879_1000247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6231	Open in IMG/M
3300027056\|Ga0209879_1017207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1193	Open in IMG/M
3300027056\|Ga0209879_1071659	Not Available	548	Open in IMG/M
3300027277\|Ga0209846_1012903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1407	Open in IMG/M
3300027324\|Ga0209845_1015245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1276	Open in IMG/M
3300027379\|Ga0209842_1000669	All Organisms → cellular organisms → Bacteria	6564	Open in IMG/M
3300027379\|Ga0209842_1004874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2659	Open in IMG/M
3300027379\|Ga0209842_1019152	Not Available	1327	Open in IMG/M
3300027561\|Ga0209887_1064140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300027650\|Ga0256866_1019376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1726	Open in IMG/M
3300027743\|Ga0209593_10079402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1226	Open in IMG/M
3300027818\|Ga0209706_10485029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300027880\|Ga0209481_10021119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2883	Open in IMG/M
3300027907\|Ga0207428_11199184	Not Available	528	Open in IMG/M
3300027909\|Ga0209382_10230075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2113	Open in IMG/M
3300027909\|Ga0209382_11189700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300027909\|Ga0209382_11438676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300027909\|Ga0209382_12147635	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027956\|Ga0209820_1123015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300027961\|Ga0209853_1045164	Not Available	1238	Open in IMG/M
3300028589\|Ga0247818_10723828	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300028589\|Ga0247818_11057179	Not Available	576	Open in IMG/M
3300028708\|Ga0307295_10177041	Not Available	599	Open in IMG/M
3300028719\|Ga0307301_10066932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300028720\|Ga0307317_10088500	Not Available	1020	Open in IMG/M
3300028812\|Ga0247825_10557412	Not Available	819	Open in IMG/M
3300028814\|Ga0307302_10275645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300028819\|Ga0307296_10008711	All Organisms → cellular organisms → Bacteria	5309	Open in IMG/M
3300028878\|Ga0307278_10006022	All Organisms → cellular organisms → Bacteria	5790	Open in IMG/M
3300030006\|Ga0299907_10025567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4514	Open in IMG/M
3300030606\|Ga0299906_11040226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300031114\|Ga0308187_10350670	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031184\|Ga0307499_10167805	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031548\|Ga0307408_102018882	Not Available	555	Open in IMG/M
3300031854\|Ga0310904_11448962	Not Available	501	Open in IMG/M
3300031949\|Ga0214473_10080724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3804	Open in IMG/M
3300031949\|Ga0214473_10321830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1761	Open in IMG/M
3300031949\|Ga0214473_10428317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1489	Open in IMG/M
3300031949\|Ga0214473_10805630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300031949\|Ga0214473_10935460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300031949\|Ga0214473_11218984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300031965\|Ga0326597_10311967	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300032174\|Ga0307470_10342065	Not Available	1034	Open in IMG/M
3300033551\|Ga0247830_10986045	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300033812\|Ga0364926_135842	Not Available	522	Open in IMG/M
3300034113\|Ga0364937_000808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3331	Open in IMG/M
3300034151\|Ga0364935_0068013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1060	Open in IMG/M
3300034151\|Ga0364935_0233115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300034165\|Ga0364942_0314430	Not Available	513	Open in IMG/M
3300034663\|Ga0314784_173716	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300034664\|Ga0314786_088936	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300034664\|Ga0314786_166581	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.72%
Host-Associated	Host-Associated	15.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.17%
Aquatic	Environmental → Aquatic	30.56%
Plants	Host-Associated → Plants	15.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.85%
Sediment	Environmental → Aquatic → Sediment	21.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.19%
Freshwater	Environmental → Aquatic → Freshwater	6.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.09%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.78%
Floodplain	Environmental → Terrestrial → Floodplain	2.31%
Marine	Environmental → Aquatic → Marine	0.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	21.30%
Sand	Environmental → Terrestrial → Soil → Sand	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.26%
Loam	Environmental → Terrestrial → Soil → Loam	8.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.63%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	2.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	21.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.98%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.02%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.70%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	2.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.31%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.46%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	15.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	10.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.41%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	5.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.70%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.31%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.39%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.46%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.46%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002149	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026827	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)	Environmental	Open in IMG/M
3300026878	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC (SPAdes)	Environmental	Open in IMG/M
3300026894	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_03240380	2124908045	Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSRAAESRSVTRRIGRAALAAAAWPIKH
INPhiseqgaiiFebDRAFT_1017882459	3300000364	Soil	MLSGEMARHQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH*
JGI10213J12805_103104821	3300000858	Soil	MLSGEMARYQIADRVRDAEVDRMARSTRRAKVASRQTFARKIGRAAVAVAQWPVKH*
JGI10213J12805_105541543	3300000858	Soil	MLSDEMARYRIADRVRDAEAARLARSTRRGKELETRGFARRIGRAALAVALWPVRQ*
JGI10216J12902_1005393131	3300000956	Soil	MLSGEMARYQIADRHREAQADRLARSTRRSKAVEARSLTRRIGRAALAAATWPVKH*
C687J26616_100985192	3300002120	Soil	MLNGDPSLARYRMADRLREAEAARLSKATRRARTADERGVTRRVGRAALAVALWPVKH*
C687J26657_100547801	3300002149	Soil	MLSGEMARHQIADRVREAEAERFARATRRSRAADERSATRRFARAAFAAVLWPVKH*
C687J29039_100312441	3300002243	Soil	YRMAXRLREAXAARLSXATRRARTADERGVTRRVGRAALAVALWPVKH*
C687J29039_101822912	3300002243	Soil	MLSGDMARYQIADRVREAEAARMAKSTRRARTADERGMARRVGRAALAAALWPVKH*
Ga0055438_101829891	3300003995	Natural And Restored Wetlands	MLSGDMARYQIADRVREAEHARIAKTTRRARTADERGVARRVGRAALAAALW
Ga0062589_1002540013	3300004156	Soil	MLSGEMARYQIADRHREAHADRLARSTRRGKAVEARSLTRRIGRAALAAATWPVKH*
Ga0063356_1013734632	3300004463	Arabidopsis Thaliana Rhizosphere	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH*
Ga0062595_1007777892	3300004479	Soil	MLSGEMARYQIADRHREAHADRLARSTRRGRAVETRGLTRRIGRAALAAATWPVKH*
Ga0062592_1021083562	3300004480	Soil	VREAEADRLARSTRRSRAADSRSVTRRIGRAALAAATWPIKH*
Ga0062591_1003042123	3300004643	Soil	MLSGEMARYQIADRHREAQADRMARSTRRGKAVEARGLTRRIGRAALAAATWPVKH*
Ga0062594_1001505983	3300005093	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAADSRSVTRRIGRAALAAATWPIKH*
Ga0062594_1002623831	3300005093	Soil	MLSGEMARSQIGDRVREAEADRLARSTRRSRAASSRGVTRRIGRAALAAATWPIKH*
Ga0062594_1006647531	3300005093	Soil	MLSGEMARHQINDRVREAEADRLARSTRRSRAATSRGVTRRIGRAALAAATWPIKH*
Ga0066812_10005321	3300005105	Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPVKH*
Ga0070670_1000735492	3300005331	Switchgrass Rhizosphere	MLSGEMARHQIGDRVREAEAERLARSTRRSRAAESRSVTRRIGRAALAAATWPIKH*
Ga0066388_1011113092	3300005332	Tropical Forest Soil	MLSGEMARYQIADRHREAEADRMARSTRRSKSADARGLTRRIGRAAIAAAVWPVKH*
Ga0070701_102177311	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLSGEMARHQIGDRVREAEADRLARSTRRSRAAESRGVTRRIGRAALAAATWPIKH*
Ga0070694_1000286444	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLSGEMARSQIGDRVREAEADRLARSTRRSRAADSRSVTRRIGRAALAAATWPIKH*
Ga0070698_1008839041	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLSGEMARHQISDRVREAEADRLARSTRRARAADSRGVARRIGRAALAAATWPIKH*
Ga0066905_1013778901	3300005713	Tropical Forest Soil	MLSGEMARYQIADRHREAQADRLARSTRRSRAADARGLTRRIGRAALAAATWPVKH*
Ga0066905_1022239652	3300005713	Tropical Forest Soil	SSEGGAQMLSGEMARSQIADRHREAQADRLARSTRRGRAVEARSFTRRIGRAALAAATWPVKH*
Ga0068862_1008013442	3300005844	Switchgrass Rhizosphere	MLSGEMARHQIGDRVREAEAERLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH*
Ga0081455_1000100525	3300005937	Tabebuia Heterophylla Rhizosphere	MFSGEMARYQIADRHREAEADRLARSTRRSKALDRRSFTRRIGRAALAAATWPVKH*
Ga0081455_100011283	3300005937	Tabebuia Heterophylla Rhizosphere	MLSGEMARYQIADRHREAHADRLARSTRRGKAVEARSFTRRIGRAALAAATWPVKH*
Ga0081455_100118724	3300005937	Tabebuia Heterophylla Rhizosphere	MLSGEMARYQIADRHREAQADRLARSTRRARSVEARSFTRRIGRAAIAAATWPIKH*
Ga0075417_105144512	3300006049	Populus Rhizosphere	MLSGEMARHQIGDRVREAEADRLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH*
Ga0074051_100010313	3300006572	Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATW
Ga0074048_133743202	3300006581	Soil	MLSGEMAQYQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH*
Ga0075428_1000189956	3300006844	Populus Rhizosphere	MLSGDMARSQIADRVREAEAARLAKSTRRAQAASDQSFRRRIGRAAIAAARWPTRHQTRPRPSVHGADT*
Ga0075428_1000737183	3300006844	Populus Rhizosphere	MLSGDMARYQIADRHREAHADRLARSTRRGKAVEARGFTRRIGRAALAAATWPVKH*
Ga0075428_1002138703	3300006844	Populus Rhizosphere	MLSGEMARHQIADRHREAQADRLARSTRRGRAVEARSFTRRIGRAALAAATWPVKH*
Ga0075428_1003963033	3300006844	Populus Rhizosphere	MLSGEMARHQIADRVREAEAARLARSTRKGKAVESRGITRRIGRAALAAATWPIKH*
Ga0075421_1001454313	3300006845	Populus Rhizosphere	MLSDEMARYRIADRVRDAEAARLARSTRRGKELETRGFARRIGRAALAVALWPVRH*
Ga0075431_1017312572	3300006847	Populus Rhizosphere	MLSGEMARYQISDRVREAEADRRARSTRRSKAMESRGIARRIGRAALAAATWPIKH*
Ga0073934_100007554	3300006865	Hot Spring Sediment	MLSGEMAKHRIADRVREAEAERIARATRRSRVADERGATRRFARAAFAAVLWPIKH*
Ga0073934_1000733911	3300006865	Hot Spring Sediment	MLSGEMARLRIADRVREAEADRLAHATRRSRSADERSATRRFARAAIAAVLWPVRH*
Ga0073934_100703101	3300006865	Hot Spring Sediment	MLSGEMARYQIADRVREAEAARVARSTRKGKATESRGITRRIGRAALAAATWPIKH*
Ga0073934_103234822	3300006865	Hot Spring Sediment	MLSGDMARYQIADRVREAEADRRARSTRRSKMADERGITRRIGRAAIAAVVWPVRH*
Ga0075419_108456311	3300006969	Populus Rhizosphere	LSGEMARHQIADRHREAQADRLARSTRRGRAVEARSFTRRIGRAALAAATWPVKH*
Ga0105098_100340722	3300009081	Freshwater Sediment	MLSGEMARHQIADRVREAEAARVARSTRKGKAAESRGITRRIGRAALAAATWPIKH*
Ga0105107_104719122	3300009087	Freshwater Sediment	MLSGDMARHRIADRVREAEAERLARATRRSRLADERSVRFRVERAATAAVPWPARR*
Ga0105107_107310692	3300009087	Freshwater Sediment	MLSGEMARYRIDDRVREAEAERRARTTRRSRIADERSIARRATRAAIAVVVWPVKH*
Ga0111539_110808602	3300009094	Populus Rhizosphere	MLSGEMARHQISDRVREAEADRLARSTRRSRAATSRGVTRRIGRAALAAATWPIKH*
Ga0111539_113632362	3300009094	Populus Rhizosphere	MARHQIADRHREAQADRLARSTRRGRAVEARSFTRRIGRAALAAATWPVKH*
Ga0105092_104705862	3300009157	Freshwater Sediment	MLSGEMARHQIADRVREAEAARLARSTRKGKATESRGITRRIGRAALAAATWPIKH*
Ga0105104_100128613	3300009168	Freshwater Sediment	MLSGEMARHQIADRVREAEASRLARSTRKGKAMESRGITRRIGRAALAAATWPIKH*
Ga0105104_102021991	3300009168	Freshwater Sediment	MLSGEMARYQIADRVREAEAARMARSTRKVKAMESRGITRRIGRAALAAATWPIKH*
Ga0105340_10514533	3300009610	Soil	MLSGEMARYQISDRVRGAEADRRARSTRRSKAMGSRGITRRIGRAALAAATWPIKH*
Ga0105252_103190782	3300009678	Soil	MLSGEMARYQIADRVRDGEAARVARTTRRAKASDERAFARRVGRAALVAALWPVKH*
Ga0126307_105043472	3300009789	Serpentine Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRSVSRRIGRAALAAATWPIKH*
Ga0105089_11029551	3300009809	Groundwater Sand	RVREAEAARLARSTRKGKAMESRGITRRIGRAALAAATWPIKH*
Ga0105084_10801782	3300009811	Groundwater Sand	MLSGEMARHQIADRVREAEAARVARSTRKGKAVESRGITRRIGRAALAAATWPIKH*
Ga0105057_10601142	3300009813	Groundwater Sand	MLSGEMARHQIGDRVREAEADRLARSTRRSKAAESRGVTRRIGRAALAAATWPI
Ga0105062_10012563	3300009817	Groundwater Sand	MLSGEMARYQIGDRVREAEADRLARSTRRSKAAESRSVTRRIGRAALTAATWPIKH*
Ga0105087_10361951	3300009819	Groundwater Sand	MLSGEMARYQIGDRVREAEADRLARSTRRSKAAESRRVTRRIGRAALAAATWPIKH*
Ga0105064_10288401	3300009821	Groundwater Sand	ARHQIADRVREAEAARLARSTRKGKAMESRGITRRIGRAALAAATWPIKH*
Ga0105064_10340571	3300009821	Groundwater Sand	MLSGEMARYQIGDRVREAEADRLARSTRRSKAAESRSVTRRIGRAALTA
Ga0105058_10276752	3300009837	Groundwater Sand	MLSGEMARYRIADRVRDAEAARLARSTRRGKELETRGFARRIGRAALAVALWAVRQ*
Ga0105058_11742531	3300009837	Groundwater Sand	IADRVREAEAERVARSTRKGKTMESRGITRRIGRAALAAATWPIKH*
Ga0105058_11928022	3300009837	Groundwater Sand	MLSGEMARYQISARVREAEADPRARSTRRSKAMESRGITRRIRRAALAAATWPIKH*
Ga0105074_11192141	3300010029	Groundwater Sand	GGSEMLSGEMARHQIADRVREAEAERVARSTRKGKTMESRGITRRIGRAALAAATWPIKH
Ga0126312_104054102	3300010041	Serpentine Soil	MLSGEMARYEIGDRVREAEAERLARSTRRSRAAESRSVTRRIGRAALAAAAWPIKH*
Ga0126377_1000104619	3300010362	Tropical Forest Soil	MLSGEMARYQIADRHREAQADRLARTTRRSKAVEARSFTRRIGRAALAAATWPVKH*
Ga0134127_119495761	3300010399	Terrestrial Soil	MLSGEMARHQISDRVREAEADRLARSTRRARAADSRSVTRRIGRAALAAATWPIKH*
Ga0105246_116025552	3300011119	Miscanthus Rhizosphere	MLSGEMARRQINDRVREAEADRLARSTRRSRAATSRGVTRRIGRAALAAATWPIKH*
Ga0137348_10111212	3300011398	Soil	MLSGEMARYQISDRVREAEADRRARSTRRSKAMESRGITRRIGRAALAAATWPIKH*
Ga0137424_11179841	3300011412	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAADSRGVARRIGRAALAAATWPIKH*
Ga0137314_10614361	3300011420	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAAESRSVTRRIGRAALAAATWPIKH*
Ga0137455_12642522	3300011429	Soil	MLSGEMARYQIGDRLREAEADRLARSTRRSRAADSRGVARRIGRAALAAATWPIKH*
Ga0137432_11558371	3300011439	Soil	ISDRVREAEADRRARSTRRSKAMESRGITRRIGRAALAAATWPIKH*
Ga0137427_103204161	3300011445	Soil	MLSGEMARYQIADRVRDGEAARVARTTRRAKASDERAFARRVGRAALAAALWPVKH*
Ga0137461_12079911	3300012040	Soil	MLSGEMARYQIADRVRDAEAARTAKTTRRAKAADGRAFTRRVGRAALAAALWPVKH*
Ga0137344_10298562	3300012159	Soil	GEMARYQIADRVREAEAARVARSTRKGKAMESRGITRRIGRAALAAATWPIKH*
Ga0137375_105359663	3300012360	Vadose Zone Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSRAAESRSVTRRIGRAALAAATWPIKH*
Ga0137375_113430381	3300012360	Vadose Zone Soil	QIGDRVREAEAERLAKSTRRSRAAESRSVTRRIGRAALAAAAWPIKH*
Ga0157296_100753151	3300012905	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAANSRGVTRRIGRAALAAATWPIKH*
Ga0126375_120655191	3300012948	Tropical Forest Soil	MLSGEMARYQIADRHREAEADRVARSTRRSRSADVRSFTRRIGRAAIAAAVWPVKH*
Ga0163162_106359591	3300013306	Switchgrass Rhizosphere	MARSQIGDRVREAEADRLARSTRRSRAASSRGVTRRIGRAALAAATWPIKH*
Ga0157375_108418551	3300013308	Miscanthus Rhizosphere	IGDRVREAEADRLARSTRRSRAASSRGMTRRIGRAALAAATWPIKH*
Ga0075351_12093392	3300014318	Natural And Restored Wetlands	MLSGEMARYQIAERVRDAQADRIARTTRRAKAAGERGFGRRVGRVAL
Ga0075342_10856671	3300014320	Natural And Restored Wetlands	SRRRKETEMLSGEMARYQIADRVRDAEAARIAKSTRRARSADSRGVARRMGRAALAAALWPVKH*
Ga0120193_100910191	3300014965	Terrestrial	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH*
Ga0157376_124801382	3300014969	Miscanthus Rhizosphere	AEMLSGEMARSQIGDRVREAEADRLARSTRRSRAASSRGVTRRIGRAALAAATWPIKH*
Ga0132258_123768312	3300015371	Arabidopsis Rhizosphere	MLSGEMARYQIADRHREAHADRLARSTRRGKAVEARGLTRRIGRAALAAATWPVKH*
Ga0163161_119446052	3300017792	Switchgrass Rhizosphere	MLSGEMARHQIGDRVREAEADRLARSTRRSRAAESRGVTRRIGRAALAAATWPIKH
Ga0184610_10036024	3300017997	Groundwater Sediment	MLSGEMARHQIGDRVREAEAERLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0184610_10051851	3300017997	Groundwater Sediment	MLSGEMARYQIADRVREAEAARVARSTHKGKAMESRGITRRIGRAALAAATWPIKH
Ga0184610_10302762	3300017997	Groundwater Sediment	MLSGEMARHQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH
Ga0184604_100230691	3300018000	Groundwater Sediment	LSGEMARHQIGDRVREAEAERMARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0184608_102808132	3300018028	Groundwater Sediment	MLSGEMARYQIADRVREAEAARVARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0184608_103938181	3300018028	Groundwater Sediment	MLSGEMARHQIGDRVREAEADRLARSTRRSKAAESRGVTRRIGRAALAAAT
Ga0184634_100285771	3300018031	Groundwater Sediment	MLSGEMARYQIADRVREAEAARMARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0184634_100314662	3300018031	Groundwater Sediment	MLSGEMARYQIADRVREAEADRLARSTRRAKTADQRGFTRKVGRAALAAALWPITH
Ga0184634_101560262	3300018031	Groundwater Sediment	MLSGEMARYQIEDRVRQAEAARMARTTRNGKSLETRSITRRIGRAALAAATWPIKH
Ga0184634_104616131	3300018031	Groundwater Sediment	GFAQGRAAGGAQMLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0184620_101681821	3300018051	Groundwater Sediment	RVREAEADRLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0184638_10128332	3300018052	Groundwater Sediment	MLSGEMARYQIADRVREAEAARVARSTRKSKAVESRGITRRIGRAALAAATWPIKH
Ga0184638_10945672	3300018052	Groundwater Sediment	MLSGEMARHQIGDRVREAEAERLARSTRRSKALESRGVSRRIGRAALAAATWPIKH
Ga0184626_100657823	3300018053	Groundwater Sediment	MLSGEMARYQIADRVREAEAARVARSTRKGKAVESRGITRRIGRAALAAATWPIKH
Ga0184621_103286112	3300018054	Groundwater Sediment	RVREAEAERLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0184616_101587962	3300018055	Groundwater Sediment	MLSGEMARYQIGDRVREAEADRMARSTRRSRVASSRGVTRRIGRAALAAATWPIKH
Ga0184623_100056376	3300018056	Groundwater Sediment	MLSGEMARYQIADRVREAEAARVARSTRKGKAVESRGITRRIGRAAVAAATWPIKH
Ga0184623_100727683	3300018056	Groundwater Sediment	MLSGEMARYQIADRVREAEAARTARSTRRVKAVESRSISRRIGRAALAAATWPIKH
Ga0184623_100765231	3300018056	Groundwater Sediment	KVLEGGAEMLSGEMARYQIADRVREAEAARVARSTHKGKAMESRGITRRIGRAALAAATWPIKH
Ga0184623_101912582	3300018056	Groundwater Sediment	MLSGEMARYQIADRVLQADAARMARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0184623_102157402	3300018056	Groundwater Sediment	LSGEMARYQIGDRVREADADRRARSTRRSKAMESRGITRRIGRAALAAATWPIKH
Ga0184623_103004542	3300018056	Groundwater Sediment	MLSGEMARYQIADRVREAEVDRVARSTRRARTADRRSFTRRSVRATLVAALWPIKH
Ga0184637_100103878	3300018063	Groundwater Sediment	MLSGEMARYQIADRVLQADAARMARSTRKGKAMESRGVTRRIGRAALAAATWPIKH
Ga0184635_100191063	3300018072	Groundwater Sediment	MLSGEMARHQIGDRVREAEADRLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0184635_100448243	3300018072	Groundwater Sediment	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRSATRRIGRAALAAATWPIKH
Ga0184609_100137802	3300018076	Groundwater Sediment	MLSGEMARYQIADRVREAEAARVARSTRKGKAMESRGITRRIGRAAVAAATWPIKH
Ga0184633_101923262	3300018077	Groundwater Sediment	REAEAERLARSTRRSKALESRGVSRRIGRAALAAATWPIKH
Ga0184633_103047812	3300018077	Groundwater Sediment	MLSGEMARYQIADRVREAEADRLARSTRRAKTADQRGFTRKVGRAALAAALWPIKH
Ga0184612_100095696	3300018078	Groundwater Sediment	MLSGEMARYQISDRVRGAEADRRARSTRRSKAMESRGITRRIGRAALAAATWPIKH
Ga0184612_104836972	3300018078	Groundwater Sediment	MLSGEMVRYQIADRVREAEAARVARSTRKSNAVESRGITRRIGRAALAAATWPIKH
Ga0184627_102749532	3300018079	Groundwater Sediment	MLSGEMAQYQIADRVREAEAARVARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0184639_103572882	3300018082	Groundwater Sediment	MLSGEMARYQIADRVREAEADRVARSTRRARAADQRSFTRRSGRAALVAALWPFKH
Ga0184628_102403162	3300018083	Groundwater Sediment	MLSGEMARHQISDRVREAEADRLARSTRRSRAATSRGVTRRIGRAALAAATWPIKH
Ga0190268_100815861	3300018466	Soil	DRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH
Ga0190268_119283001	3300018466	Soil	MLSGEMARHQIADRVREAEAARVARSTRRGKAVESRGITRRIGRAALAAATWPIKH
Ga0190270_103700281	3300018469	Soil	MLSDEMARYRIADRVRDAEAARLARSTRRGKELETRGFARRIGRAALAAALWPVRQ
Ga0190270_104066672	3300018469	Soil	MLSGEMARHQIGDRVREAEADRLARSTRRSKAADSRGVARRIGRAALAAATWPIKH
Ga0190270_109765981	3300018469	Soil	MLSGEMARHQIADRVREAEAERVARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0190270_115882262	3300018469	Soil	MLSGEMARHQIADRLREAEAARVARSTRRGKAVESRGITRRIGRAALAAATWPIKH
Ga0190274_100120277	3300018476	Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSRAADSRGVTRRIGRAALAAATWPIKH
Ga0184645_12301551	3300019233	Groundwater Sediment	QIADRVREAEAARVARSTHKGKAMESRGITRRIGRAALAAATWPIKH
Ga0184648_13431672	3300019249	Groundwater Sediment	SGEMARYQIADRVREAEAARVARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0193741_10096852	3300019884	Soil	MLSGEMAQYQIADRVREAEAARVARSTRKGRAMESRGITRRIGRAALAAATWPIKH
Ga0193741_10408311	3300019884	Soil	QIADRVREAEAARVARSTRKGRAMESRGITRRIGRAALAAATWPIKH
Ga0193741_10854612	3300019884	Soil	MLSGEMARHQIADRVREAEAARVARSTRKGKAVESRGITRRIGRAALAAATWPIKH
Ga0193739_10688131	3300020003	Soil	MLSGELARYQIADRVREAEAARVARSTRKRKAVESRGITRRIGRAALAVA
Ga0210379_100098703	3300021081	Groundwater Sediment	MLSGEMARYQIGDRVREADADRRARSTRRSKAMESRGITRRIGRAALAAATWPIKH
Ga0222621_11199251	3300021510	Groundwater Sediment	MLSGEMARYQIGDRVREAEADRLARSTRRSKAAQSRGVTRRIGRAALAAATWPIKH
Ga0222621_11465282	3300021510	Groundwater Sediment	MLSGEMARYQIGDRVREAEADRLARSTRRSRAANSRSVTRRIGRAALAAASWPVKH
Ga0222625_11980942	3300022195	Groundwater Sediment	GAEMLSGEMARYQIADRVREAEAARMARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0222622_101438321	3300022756	Groundwater Sediment	RGGAEMLSGEMARHQIGDRVREAEADRLARSTRRSKAAESRGVTRRIGRAALAAATWPIK
Ga0209320_100433093	3300025155	Soil	MLNGDPSLARYRMADRLREAEAARLSKATRRARTADERGVTRRVGRAALAVALWPVKH
Ga0209619_103155491	3300025159	Soil	MLSGDMARYQIADRVREAEAARMAKSTRRARTADERGMARRVGRAALAAALWPVKH
Ga0209521_100116082	3300025164	Soil	MLNGDPSLARYRMADRLREAEAARLSEATRRARTADERGVTRRVGRAALAVALWPVKH
Ga0209642_1000089718	3300025167	Soil	MLSGEMARHQIADRVREAEAERFARATRRSRAADERSATRRFARAAFAAVLWPVKH
Ga0209642_102004132	3300025167	Soil	MLNGEMARHQIADRVREAEAERFARATRRSRAVDERSTARRFARAAIATVLWPVKH
Ga0209172_100017974	3300025310	Hot Spring Sediment	MLSGEMAKHRIADRVREAEAERIARATRRSRVADERGATRRFARAAFAAVLWPIKH
Ga0209172_1001116211	3300025310	Hot Spring Sediment	MLSGEMARLRIADRVREAEADRLAHATRRSRSADERSATRRFARAAIAAVLWPVRH
Ga0209431_102186431	3300025313	Soil	MLNGDPSLARYRMADRLREAEAARLSKATRRARTADERGVTRRV
Ga0209431_106811432	3300025313	Soil	MLSGDMARYQIADRVREAEAARIARTTRRARTADERGIARRVGRA
Ga0209520_108142011	3300025319	Soil	MLSGDMARYQIADRVREAEAARMAKSTRRARTADERGMARRVGRAAL
Ga0209641_105572551	3300025322	Soil	MLSGDMARYQIADRVREAEAGRLARTTRRARTADERGVARRVGRAALAAALWPVKH
Ga0209641_105700782	3300025322	Soil	MLSGDMARYQIADRVREAEAAGLARTTRRSGVADERGIARRVGRAALAAALWPVKH
Ga0209341_100765353	3300025325	Soil	MLSGDMARYQIADRVREAEAARIAKTTRRARTADEHGIARRVGRAALAAALWPVKH
Ga0209341_107245501	3300025325	Soil	MLSGDMARYQIADRVREAEAARIARTTRRARTADERGIARKVGRAALAAALWPVKH
Ga0207688_104310261	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MLSGEMARSQIGDRVREAEADRLARSTRRSRAASSRGVTRRIGRAALAAATWPIKH
Ga0207646_112069092	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLSGEMARHQIGDRVREAEAERLAQSTRRSKAAESRSVTRRIGRAALAAATCPIKH
Ga0207650_118121601	3300025925	Switchgrass Rhizosphere	FPKVPTEGGPEMLSGEMARHQIGDRVREAEAERLARSTRRSRAAESRSVTRRIGRAALAAATWPIKH
Ga0207703_111587861	3300026035	Switchgrass Rhizosphere	MLSGEMARSQIGDRVREAEADRLARSTRRSRAASSRGVTRRIGRAAL
Ga0207641_122377272	3300026088	Switchgrass Rhizosphere	GGPEMLSGEMARHQIGDRVREAEAERLARSTRRSRAAESRSVTRRIGRAALAAATWPIKH
Ga0207591_1034851	3300026827	Soil	MLSGEMARSQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH
Ga0208891_10035261	3300026878	Soil	AEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPVKH
Ga0207980_10043862	3300026894	Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPVKH
Ga0209896_10005132	3300027006	Groundwater Sand	MLSGEMARYQIGDRVREAEADRLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH
Ga0209879_10002475	3300027056	Groundwater Sand	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH
Ga0209879_10172072	3300027056	Groundwater Sand	MLSGEMARYQIGDRVREAEADRLARSTRRSKAAESRSVTRRIGRAALTAATWPIKH
Ga0209879_10716592	3300027056	Groundwater Sand	MLSGEMARHQIADRVREAEAARVARSTRKGKAAESRGITRRIGRAALAAATWPIKH
Ga0209846_10129031	3300027277	Groundwater Sand	MLSGEMARHQIADRVREAEAARLARSTRKGKAMESRGITRRIGRAALAAATWPIKH
Ga0209845_10152451	3300027324	Groundwater Sand	MLSGEIARYQISDRVREAEADRRARSTRRSKAMESRGITRRIGRSAL
Ga0209842_10006691	3300027379	Groundwater Sand	MLSGEMARYQIGDRVREAEADRLARSTRRSKAAESRSVTRRIGRAAL
Ga0209842_10048741	3300027379	Groundwater Sand	VREAEADRLARSTRRSKAAESRSVTRRIGRAALTAATWPIKH
Ga0209842_10191521	3300027379	Groundwater Sand	VREAEADRLARSTRRSKAAESRSVTRRIGRAALAAATWPIKH
Ga0209887_10641401	3300027561	Groundwater Sand	MLSGEMARYRIADRVRDAEAARLARSTRRGKELETRGFARRIGRAALAVALWAVRQ
Ga0256866_10193762	3300027650	Soil	MLSGEMARHQIADRVREAEAARVARSTRNGKAVESRGITRRIGRAALAAATWPIKH
Ga0209593_100794022	3300027743	Freshwater Sediment	MLSGEMARYQIADRVREAEAARMARSTRKVKAMESRGITRRIGRAALAAATWPIKH
Ga0209706_104850292	3300027818	Freshwater Sediment	EMLSGDMARHRIADRVREAEAERLARATRRSRLADERSVRFRVERAATAAVPWPARR
Ga0209481_100211193	3300027880	Populus Rhizosphere	MLSGDMARSQIADRVREAEAARLAKSTRRAQAASDQSFRRRIGRAAIAAARWPTRHQTRPRPSVHGADT
Ga0207428_111991841	3300027907	Populus Rhizosphere	MLSGEMARHQISDRVREAEADRLARSTRRSRAATSRGVTRRIGRAALAAATWP
Ga0209382_102300753	3300027909	Populus Rhizosphere	MLSGEMARHQIADRVREAEAARLARSTRKGKAVESRGITRRIGRAALAAATWPIKH
Ga0209382_111897001	3300027909	Populus Rhizosphere	MLSDEMARYRIADRVRDAEAARLARSTRRGKELETRGFARRIGRAALAVALWPVRH
Ga0209382_114386761	3300027909	Populus Rhizosphere	MLSGEMARHQIADRHREAQADRLARSTRRGRAVEARSFTRRIGRAALAAATWPVKH
Ga0209382_121476352	3300027909	Populus Rhizosphere	REAHADRLARSTRRGKAVEARGFTRRIGRAALAAATWPVKH
Ga0209820_11230152	3300027956	Freshwater Sediment	RVARSTRKGKAAESRGITRRIGRAALAAATWPIKH
Ga0209853_10451642	3300027961	Groundwater Sand	MLSGEMARHQIGDRVREAEADRLARSTRRSKAAESRSVTRRIGRAALTAATWPIKH
Ga0247818_107238281	3300028589	Soil	MLSGEMARYQIGDRVREAEAERLARSTRRSKAAESRGVTRRVGRAALAAATWPIKH
Ga0247818_110571792	3300028589	Soil	MLSGEMARHQINDRVREAEADRLARSTRRSRAATSRGVTRRIGRAALAAATWPIKH
Ga0307295_101770412	3300028708	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAANSRSVTRRICRAALAAASWPVKH
Ga0307301_100669321	3300028719	Soil	MLNGEMARYQIGDRVREAEAERLARSTRRSKAAESRSVSRRIGRAALAAATWPIKH
Ga0307317_100885002	3300028720	Soil	AEMLSGEMARYQIGDRVREAEADRLARSTRRSKAAQSRGVTRRIGRAALAAATWPIKH
Ga0247825_105574122	3300028812	Soil	YQIGDRVREAEADRLARSTRRSRAADSRSVTRRIGRAALAAATWPIKH
Ga0307302_102756452	3300028814	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAANSRSVTRRIGRAALAAATWPIKH
Ga0307296_100087118	3300028819	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAAQSRGVTRRIGRAALAAATWPIKH
Ga0307278_100060222	3300028878	Soil	MLSGEMARYQIGDRVREAEAERLARSTHRSKAAESRSVTRRIGRAALAAATWPIKH
Ga0299907_100255672	3300030006	Soil	MLSGDMARYQIADRVREAEAARLAKSTRRANAASEQSFRRRIGRAALAAALWPTKH
Ga0299906_110402262	3300030606	Soil	GEMARYQIGDRVREAEAARLARSTRKGKAMESRGITRRIGGAALAAATWPIKH
Ga0308187_103506702	3300031114	Soil	SGEMARHQIGDRVREAEAERLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0307499_101678051	3300031184	Soil	MLSGEMARYQIGDRVREAEADRLARSTRRSRAASSRGVTRRIGRAALAAATWPIKH
Ga0307408_1020188821	3300031548	Rhizosphere	MLSGEMARYQIADRHREAQADRLARSTRRSKAAEARSFTRRIGRAALAAATWPIKH
Ga0310904_114489621	3300031854	Soil	MLSGEMARYQIGDRVRQAEADRLARSTRRSKAADSRSVTRRIGRAA
Ga0214473_100807245	3300031949	Soil	MLSGDMARYQIADRVREAEAARIARTTRRARTADERGIARRVGRAALAAALWPVKH
Ga0214473_103218301	3300031949	Soil	MLSGDMARYQIADRVREAEAARMAKSTRRARTTDERGMARRVGRAALAAALWPVKH
Ga0214473_104283171	3300031949	Soil	MLSGDMARYQIADRVREAEAARIAGSTRRAKAADERGFTRRVGRAALVAVLWPVKH
Ga0214473_108056301	3300031949	Soil	MLSGEMARYQIADRVRDAEAARVAKTTRRAKAADERAFTRRVGRAALAAALWPVKH
Ga0214473_109354601	3300031949	Soil	MLSGEMARYQIADRVRDAEADRLARSTRRSKAVRSRSISRRIGRAALAAATWPIKH
Ga0214473_112189842	3300031949	Soil	MLSGDMARYQIADRVREAEAARIAKTTRRARTADERGITRRVGRAALAAALWPVKH
Ga0326597_103119673	3300031965	Soil	MLNGDPTLARYRMADRLREAEAARLSKATRRARTADERGVASRVGRAALAVALWPVKH
Ga0307470_103420651	3300032174	Hardwood Forest Soil	HQIGDRVREAEADRLARSTRRSKAAESRGVARRIGRAALAAATWPIKH
Ga0247830_109860451	3300033551	Soil	QIGDRVREAEADRLARSTRRSKAAESRGVTRRIGRAALAAATWPIKH
Ga0364926_135842_20_190	3300033812	Sediment	MLSGEMARYQIADRVREAEAARVARSTRKGKATESRGITRRIGRAALAAATWPIKH
Ga0364937_000808_2636_2806	3300034113	Sediment	MLSGEMARYQISDRVRGAEADRRARSTRRSKAMGSRGITRRIGRAALAAATWPIKH
Ga0364935_0068013_486_656	3300034151	Sediment	MLSVEMARYQISDRVRGAEADRRARSTRRSKAMESRGITRRIGRAALAAATWPIKH
Ga0364935_0233115_3_152	3300034151	Sediment	MLSGEMARYQIADRVREAEAARVARSTRKGKAVESRGITRRIGRAALAAA
Ga0364942_0314430_378_512	3300034165	Sediment	MLSGEMARYQIADRVRDAEAARVAKTTRRAKAADERAFTRRVGRA
Ga0314784_173716_3_146	3300034663	Soil	QIGDRVREAEADRLARSTRRSKAADSRGVARRIGRAALAAATWPIKH
Ga0314786_088936_20_190	3300034664	Soil	MLSGEMARSQIGDRVREAEADRLARSTRRSRAANSRGVTRRIGRAALAAATWPIKH
Ga0314786_166581_3_176	3300034664	Soil	EMLSGEMARYQIADRHREAHADRLARSTRRGKAVEARGLTRRIGRAALAAATWPVKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F021978

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences