Metagenome / Metatranscriptome Family F022902

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F022902
Family Type	Metagenome / Metatranscriptome
Number of Sequences	212
Average Sequence Length	49 residues
Representative Sequence	VRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV
Number of Associated Samples	150
Number of Associated Scaffolds	212

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	94.81 %
% of genes from short scaffolds (< 2000 bps)	94.34 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.207 % of family members)
Environment Ontology (ENVO)	Unclassified (55.660 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.491 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 212 Family Scaffolds
PF13884	Peptidase_S74	1.42
PF08840	BAAT_C	0.47
PF02321	OEP	0.47
PF12680	SnoaL_2	0.47
PF02837	Glyco_hydro_2_N	0.47
PF00263	Secretin	0.47
PF13520	AA_permease_2	0.47

COG ID	Name	Functional Category	% Frequency in 212 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.47

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.11 %
Unclassified	root	N/A	26.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.64 %
Unclassified	root	N/A	26.89 %
Viruses	superkingdom	All Organisms → Viruses	0.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.64 %
Unclassified	root	N/A	26.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	51.42 %
Unclassified	root	N/A	26.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	51.42 %
Unclassified	root	N/A	26.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	51.42 %
Unclassified	root	N/A	26.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.02 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.30 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	51.42 %
Unclassified	root	N/A	26.89 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.30 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.42 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.47 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.47 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	51.42 %
Unclassified	root	N/A	26.89 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	3.30 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.42 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	51.42 %
Unclassified	root	N/A	26.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.30 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	1.42 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	51.42 %
Unclassified	root	N/A	26.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.30 %
Methylobacterium sp. WL12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL12	1.42 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.47 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_3035298	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	902	Open in IMG/M
2170459002\|F0B48LX02J3ZO0	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	527	Open in IMG/M
2170459006\|GBPF9FW01BGO2G	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	502	Open in IMG/M
2170459010\|GIO7OMY01C5AM1	Not Available	530	Open in IMG/M
3300002244\|JGI24742J22300_10029824	Not Available	950	Open in IMG/M
3300002244\|JGI24742J22300_10043294	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300004114\|Ga0062593_103403958	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300004463\|Ga0063356_102041719	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300005148\|Ga0066819_1007603	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	724	Open in IMG/M
3300005330\|Ga0070690_100981640	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	665	Open in IMG/M
3300005331\|Ga0070670_100399172	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300005340\|Ga0070689_102113928	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	515	Open in IMG/M
3300005347\|Ga0070668_100207803	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1609	Open in IMG/M
3300005353\|Ga0070669_101284410	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	633	Open in IMG/M
3300005354\|Ga0070675_101403685	Not Available	644	Open in IMG/M
3300005355\|Ga0070671_101738864	Not Available	554	Open in IMG/M
3300005356\|Ga0070674_100724032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	852	Open in IMG/M
3300005356\|Ga0070674_100901926	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	770	Open in IMG/M
3300005364\|Ga0070673_101137539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300005365\|Ga0070688_100320261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL12	1126	Open in IMG/M
3300005365\|Ga0070688_101482823	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	551	Open in IMG/M
3300005457\|Ga0070662_100387960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1151	Open in IMG/M
3300005459\|Ga0068867_102345989	Not Available	507	Open in IMG/M
3300005544\|Ga0070686_100301642	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1188	Open in IMG/M
3300005578\|Ga0068854_100507259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1017	Open in IMG/M
3300005616\|Ga0068852_101192465	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005618\|Ga0068864_100816372	Not Available	917	Open in IMG/M
3300005618\|Ga0068864_100846055	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005618\|Ga0068864_101609741	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	653	Open in IMG/M
3300005618\|Ga0068864_102020322	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	583	Open in IMG/M
3300005719\|Ga0068861_100283612	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300005719\|Ga0068861_100765312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	903	Open in IMG/M
3300005842\|Ga0068858_100675748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1004	Open in IMG/M
3300005843\|Ga0068860_101856180	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	624	Open in IMG/M
3300005844\|Ga0068862_102225227	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006031\|Ga0066651_10012514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3482	Open in IMG/M
3300006048\|Ga0075363_100573770	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	674	Open in IMG/M
3300006237\|Ga0097621_100569901	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300006237\|Ga0097621_102064839	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006237\|Ga0097621_102258819	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	520	Open in IMG/M
3300006358\|Ga0068871_100957193	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	796	Open in IMG/M
3300006358\|Ga0068871_102027764	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300006358\|Ga0068871_102114132	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	536	Open in IMG/M
3300006604\|Ga0074060_10942931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	897	Open in IMG/M
3300006606\|Ga0074062_13019317	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	750	Open in IMG/M
3300006871\|Ga0075434_101825757	Not Available	614	Open in IMG/M
3300006881\|Ga0068865_100582932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	943	Open in IMG/M
3300009081\|Ga0105098_10378872	Not Available	697	Open in IMG/M
3300009094\|Ga0111539_10326730	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1785	Open in IMG/M
3300009094\|Ga0111539_12572511	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	590	Open in IMG/M
3300009098\|Ga0105245_10387019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL12	1394	Open in IMG/M
3300009098\|Ga0105245_10756644	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1008	Open in IMG/M
3300009098\|Ga0105245_10797105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	982	Open in IMG/M
3300009098\|Ga0105245_10813914	Not Available	973	Open in IMG/M
3300009098\|Ga0105245_11857018	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	655	Open in IMG/M
3300009098\|Ga0105245_12438368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	576	Open in IMG/M
3300009148\|Ga0105243_12374682	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	568	Open in IMG/M
3300009156\|Ga0111538_11172687	Not Available	971	Open in IMG/M
3300009156\|Ga0111538_12670005	Not Available	626	Open in IMG/M
3300009156\|Ga0111538_13403551	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	553	Open in IMG/M
3300009176\|Ga0105242_10204148	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1757	Open in IMG/M
3300009176\|Ga0105242_11166977	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	788	Open in IMG/M
3300009176\|Ga0105242_12272314	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	588	Open in IMG/M
3300009176\|Ga0105242_13174264	Not Available	510	Open in IMG/M
3300009177\|Ga0105248_11622338	Not Available	733	Open in IMG/M
3300009177\|Ga0105248_12475137	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	591	Open in IMG/M
3300009177\|Ga0105248_13317487	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	512	Open in IMG/M
3300009551\|Ga0105238_10002586	All Organisms → cellular organisms → Bacteria	18035	Open in IMG/M
3300009551\|Ga0105238_12313173	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	573	Open in IMG/M
3300009610\|Ga0105340_1258180	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	749	Open in IMG/M
3300009678\|Ga0105252_10571300	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	522	Open in IMG/M
3300010362\|Ga0126377_10728616	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1046	Open in IMG/M
3300011119\|Ga0105246_11829086	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	581	Open in IMG/M
3300011119\|Ga0105246_12510952	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	507	Open in IMG/M
3300011400\|Ga0137312_1013452	Not Available	1071	Open in IMG/M
3300011400\|Ga0137312_1014292	Not Available	1050	Open in IMG/M
3300011400\|Ga0137312_1024219	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	885	Open in IMG/M
3300011415\|Ga0137325_1027807	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1145	Open in IMG/M
3300011422\|Ga0137425_1098464	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	707	Open in IMG/M
3300011430\|Ga0137423_1191758	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	614	Open in IMG/M
3300011439\|Ga0137432_1187541	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	669	Open in IMG/M
3300011442\|Ga0137437_1174747	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	745	Open in IMG/M
3300012159\|Ga0137344_1044060	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	781	Open in IMG/M
3300012891\|Ga0157305_10034375	Not Available	1006	Open in IMG/M
3300012896\|Ga0157303_10069722	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	777	Open in IMG/M
3300012898\|Ga0157293_10125218	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	695	Open in IMG/M
3300012899\|Ga0157299_10289338	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	537	Open in IMG/M
3300012901\|Ga0157288_10124319	Not Available	736	Open in IMG/M
3300012903\|Ga0157289_10021072	Not Available	1424	Open in IMG/M
3300012903\|Ga0157289_10077141	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	906	Open in IMG/M
3300012905\|Ga0157296_10254579	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	591	Open in IMG/M
3300012908\|Ga0157286_10405692	Not Available	530	Open in IMG/M
3300012909\|Ga0157290_10391894	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	540	Open in IMG/M
3300012913\|Ga0157298_10368699	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	535	Open in IMG/M
3300012913\|Ga0157298_10379754	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	531	Open in IMG/M
3300013297\|Ga0157378_11425670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300013306\|Ga0163162_10685266	Not Available	1147	Open in IMG/M
3300013308\|Ga0157375_10320190	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1715	Open in IMG/M
3300013308\|Ga0157375_11251459	Not Available	871	Open in IMG/M
3300014325\|Ga0163163_10757909	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1034	Open in IMG/M
3300014325\|Ga0163163_12342044	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	593	Open in IMG/M
3300014325\|Ga0163163_12762573	Not Available	548	Open in IMG/M
3300014326\|Ga0157380_11916663	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	653	Open in IMG/M
3300014326\|Ga0157380_12424886	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	590	Open in IMG/M
3300014326\|Ga0157380_13343114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300014968\|Ga0157379_10633372	Not Available	1000	Open in IMG/M
3300014969\|Ga0157376_10038293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3900	Open in IMG/M
3300014969\|Ga0157376_11649586	Not Available	676	Open in IMG/M
3300015200\|Ga0173480_10519070	Not Available	717	Open in IMG/M
3300015201\|Ga0173478_10024276	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1763	Open in IMG/M
3300015371\|Ga0132258_12194883	Not Available	1386	Open in IMG/M
3300015374\|Ga0132255_101915268	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	902	Open in IMG/M
3300016270\|Ga0182036_11090438	Not Available	661	Open in IMG/M
3300017792\|Ga0163161_10220169	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1470	Open in IMG/M
3300017792\|Ga0163161_11013054	Not Available	709	Open in IMG/M
3300017792\|Ga0163161_11739001	Not Available	553	Open in IMG/M
3300018067\|Ga0184611_1317596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	539	Open in IMG/M
3300018067\|Ga0184611_1347776	Not Available	509	Open in IMG/M
3300018067\|Ga0184611_1353908	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	503	Open in IMG/M
3300018072\|Ga0184635_10332087	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	588	Open in IMG/M
3300018073\|Ga0184624_10351036	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	660	Open in IMG/M
3300018073\|Ga0184624_10523040	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	514	Open in IMG/M
3300018081\|Ga0184625_10284132	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	866	Open in IMG/M
3300018083\|Ga0184628_10169206	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1140	Open in IMG/M
3300018083\|Ga0184628_10279164	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	878	Open in IMG/M
3300018476\|Ga0190274_11474011	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	771	Open in IMG/M
3300018476\|Ga0190274_11532870	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	758	Open in IMG/M
3300018481\|Ga0190271_11830490	Not Available	719	Open in IMG/M
3300018481\|Ga0190271_12382171	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	633	Open in IMG/M
3300019361\|Ga0173482_10081894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1131	Open in IMG/M
3300020009\|Ga0193740_1012718	Not Available	1348	Open in IMG/M
3300020016\|Ga0193696_1071694	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	902	Open in IMG/M
3300021363\|Ga0193699_10331226	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	634	Open in IMG/M
3300021475\|Ga0210392_10973318	Not Available	635	Open in IMG/M
3300022893\|Ga0247787_1064062	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	555	Open in IMG/M
3300022899\|Ga0247795_1001236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4289	Open in IMG/M
3300022911\|Ga0247783_1200986	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	571	Open in IMG/M
3300022915\|Ga0247790_10080036	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	785	Open in IMG/M
3300022915\|Ga0247790_10191803	Not Available	540	Open in IMG/M
3300022917\|Ga0247777_1170475	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	710	Open in IMG/M
3300023067\|Ga0247743_1002584	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2036	Open in IMG/M
3300023079\|Ga0247758_1147872	Not Available	649	Open in IMG/M
3300024254\|Ga0247661_1023443	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1086	Open in IMG/M
3300024254\|Ga0247661_1094490	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	564	Open in IMG/M
3300024283\|Ga0247670_1097277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	543	Open in IMG/M
3300024286\|Ga0247687_1060994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	572	Open in IMG/M
3300024310\|Ga0247681_1004681	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1707	Open in IMG/M
3300024310\|Ga0247681_1050973	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	635	Open in IMG/M
3300025899\|Ga0207642_10349930	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	871	Open in IMG/M
3300025905\|Ga0207685_10189127	Not Available	960	Open in IMG/M
3300025914\|Ga0207671_10119009	Not Available	2017	Open in IMG/M
3300025925\|Ga0207650_10526892	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	989	Open in IMG/M
3300025926\|Ga0207659_10453118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL12	1081	Open in IMG/M
3300025927\|Ga0207687_11170803	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	661	Open in IMG/M
3300025927\|Ga0207687_11390315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	603	Open in IMG/M
3300025928\|Ga0207700_11247319	Not Available	663	Open in IMG/M
3300025930\|Ga0207701_10160626	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1989	Open in IMG/M
3300025930\|Ga0207701_10524801	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1012	Open in IMG/M
3300025931\|Ga0207644_11327620	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	604	Open in IMG/M
3300025934\|Ga0207686_11575595	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	542	Open in IMG/M
3300025937\|Ga0207669_10162555	All Organisms → Viruses → Predicted Viral	1579	Open in IMG/M
3300025937\|Ga0207669_11086680	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	675	Open in IMG/M
3300025938\|Ga0207704_10841999	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	768	Open in IMG/M
3300025938\|Ga0207704_11893728	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	513	Open in IMG/M
3300025940\|Ga0207691_10109782	Not Available	2454	Open in IMG/M
3300025941\|Ga0207711_10711015	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	937	Open in IMG/M
3300025960\|Ga0207651_11015959	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	741	Open in IMG/M
3300025960\|Ga0207651_11046247	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	730	Open in IMG/M
3300025960\|Ga0207651_11491094	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	609	Open in IMG/M
3300025960\|Ga0207651_11962986	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	526	Open in IMG/M
3300025961\|Ga0207712_11028272	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	732	Open in IMG/M
3300025972\|Ga0207668_10116983	Not Available	2011	Open in IMG/M
3300026023\|Ga0207677_11420493	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	639	Open in IMG/M
3300026078\|Ga0207702_10736736	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	972	Open in IMG/M
3300026088\|Ga0207641_10722276	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	982	Open in IMG/M
3300026089\|Ga0207648_11950454	Not Available	549	Open in IMG/M
3300026089\|Ga0207648_12167969	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	516	Open in IMG/M
3300026095\|Ga0207676_11191506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	755	Open in IMG/M
3300026118\|Ga0207675_100982150	Not Available	862	Open in IMG/M
3300026118\|Ga0207675_101151245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	796	Open in IMG/M
3300026118\|Ga0207675_101784507	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300026121\|Ga0207683_10199321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1819	Open in IMG/M
3300026121\|Ga0207683_10206082	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300026121\|Ga0207683_10333925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1389	Open in IMG/M
3300026929\|Ga0207461_1013716	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	504	Open in IMG/M
3300027523\|Ga0208890_1051123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	655	Open in IMG/M
3300027533\|Ga0208185_1075723	Not Available	797	Open in IMG/M
3300027821\|Ga0209811_10024974	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1972	Open in IMG/M
3300027874\|Ga0209465_10253897	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	880	Open in IMG/M
3300027907\|Ga0207428_10713272	Not Available	717	Open in IMG/M
3300028281\|Ga0247689_1010470	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300028293\|Ga0247662_1002824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2435	Open in IMG/M
3300028380\|Ga0268265_10854695	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	890	Open in IMG/M
3300028704\|Ga0307321_1121753	Not Available	541	Open in IMG/M
3300028790\|Ga0307283_10246079	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	524	Open in IMG/M
3300028803\|Ga0307281_10202660	Not Available	715	Open in IMG/M
3300028812\|Ga0247825_11250625	Not Available	542	Open in IMG/M
3300028889\|Ga0247827_11276984	Not Available	512	Open in IMG/M
3300031226\|Ga0307497_10128282	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1026	Open in IMG/M
3300031226\|Ga0307497_10168654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	924	Open in IMG/M
3300031455\|Ga0307505_10287501	Not Available	769	Open in IMG/M
3300031547\|Ga0310887_10541057	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	707	Open in IMG/M
3300031740\|Ga0307468_100652348	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	870	Open in IMG/M
3300031793\|Ga0318548_10332860	Not Available	745	Open in IMG/M
3300031799\|Ga0318565_10166595	Not Available	1070	Open in IMG/M
3300032060\|Ga0318505_10184061	Not Available	975	Open in IMG/M
3300032067\|Ga0318524_10763336	Not Available	511	Open in IMG/M
3300032205\|Ga0307472_102541083	Not Available	521	Open in IMG/M
3300034149\|Ga0364929_0089959	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	960	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.89%
Environmental	Environmental	48.11%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.89%
Terrestrial	Environmental → Terrestrial	37.26%
Aquatic	Environmental → Aquatic	10.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.40%
Sediment	Environmental → Aquatic → Sediment	10.38%
Roots	Host-Associated → Plants → Roots	4.72%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.42%
Freshwater	Environmental → Aquatic → Freshwater	0.47%
Floodplain	Environmental → Terrestrial → Floodplain	0.47%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.43%
Loam	Environmental → Terrestrial → Soil → Loam	4.25%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.25%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.47%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.47%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.47%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.55%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.47%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.47%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.02%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.13%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.47%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.47%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.47%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.47%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.47%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026929	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3w-12 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0074.00003420	2162886012	Miscanthus Rhizosphere	NTMWVSIGLMGFSHAPIVQVTVAQQAKPDVELIAIAATFEQAGVTV
E1_00749180	2170459002	Grass Soil	PSTATVRNTMWVSIGYTGFSHAPICQVTIAQQALPIVELISIAATYDGAGVNV
L01_03775980	2170459006	Grass Soil	IRNTGWVSIGMTGFSHAPVVQVTVAQQAKPDVELISISAVYERLGVNV
F62_04848560	2170459010	Grass Soil	AQWDQTYPNRLVTTNTRWVSDWGPTGFSHAPIVQITVAQRAKPSVDLISISATFERAGVN
JGI24742J22300_100298243	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	SHAPVVQVTIAQTAKPDIELISIAATFERLGVNV*
JGI24742J22300_100432943	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	PKNVIRNTGWVSIGMTGFSHAPIVQVTVAQQTKPEVDLINIAATFERDAIVV*
Ga0062593_1034039581	3300004114	Soil	NRNTLWVSIGMSGFAHAPIIQVTIAQTLRPEVELVAVTATFEVAGVNV*
Ga0063356_1020417192	3300004463	Arabidopsis Thaliana Rhizosphere	TLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV*
Ga0066819_10076032	3300005148	Soil	SIGMTGFSHAPIVQVTVAQQAKPDVELIAIAAVYEPAGVNV*
Ga0070690_1009816401	3300005330	Switchgrass Rhizosphere	LGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV*
Ga0070670_1003991721	3300005331	Switchgrass Rhizosphere	RNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV*
Ga0070689_1021139281	3300005340	Switchgrass Rhizosphere	APGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPNVELVALGATYEIAGVNV*
Ga0070668_1002078034	3300005347	Switchgrass Rhizosphere	SIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV*
Ga0070669_1012844102	3300005353	Switchgrass Rhizosphere	HRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV*
Ga0070675_1014036851	3300005354	Miscanthus Rhizosphere	VSIGQTGYSHAPIVQVTVAQNARPVVDLISIAAIFERAGINV*
Ga0070671_1017388642	3300005355	Switchgrass Rhizosphere	VSIGLTGFSHAPVVQVTVAQNAKPIVDMISIAATFERAGVNV*
Ga0070674_1007240321	3300005356	Miscanthus Rhizosphere	WGTAIWDAGTPPPLVVRNTGWVSIGLTGFSHAPIVQVTVAQQAKPEVDLISIAATYERAGVNV*
Ga0070674_1009019261	3300005356	Miscanthus Rhizosphere	DAIWDAGTPPPLVVRNTGWVSIGLTGFSHAPVVQVTVAQNAKPEVDLISIAATFERMGINV*
Ga0070673_1011375391	3300005364	Switchgrass Rhizosphere	VVRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV*
Ga0070688_1003202611	3300005365	Switchgrass Rhizosphere	VRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV*
Ga0070688_1014828231	3300005365	Switchgrass Rhizosphere	APGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV*
Ga0070662_1003879603	3300005457	Corn Rhizosphere	GMTGYSHAPVVQVTIAQTAKPDIELISIAATFERLGVNV*
Ga0068867_1023459891	3300005459	Miscanthus Rhizosphere	PPSVTVRNTGWVSIGVTGYSHAPIIQVTVAQRARPQVDLISIAATFERCGITV*
Ga0070686_1003016422	3300005544	Switchgrass Rhizosphere	NTMWVSIGLMGFSHAPIVQVTVAQQAKPDVELIAIAATFEQAGVTV*
Ga0068854_1005072593	3300005578	Corn Rhizosphere	MTGYSHAPVVQVTIAQTAKPDIELISIAATFERLGVNV*
Ga0070702_1017200161	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TPSPPPSPADLDAYAQWDLGIPRPPSVRNTGWVSIGLTGFSHAPVVQVTVAQNAKPIVDMISIAATFERAGVNV*
Ga0068852_1011924651	3300005616	Corn Rhizosphere	PAPATPTVRNTMWVSIGFTGFSHAPICQVTIAQQSAPDIELISIAATYDGAGVNV*
Ga0068864_1008163721	3300005618	Switchgrass Rhizosphere	FAHAPIVQVTVAQVARPRVELISIATTQERGGVNV*
Ga0068864_1008460553	3300005618	Switchgrass Rhizosphere	VPPKPVVRNTGWVSIGLTGYSHAPVVQVTVAQAAKPEVDLISIAATFERAGVNV*
Ga0068864_1016097411	3300005618	Switchgrass Rhizosphere	APGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV*
Ga0068864_1020203221	3300005618	Switchgrass Rhizosphere	RNTGWVSIGMTGYSHAPIVQVSVGQQAKPEVDLISIAATFERDGVNV*
Ga0068861_1002836124	3300005719	Switchgrass Rhizosphere	ALVTPVVRNTGWVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV*
Ga0068861_1007653121	3300005719	Switchgrass Rhizosphere	VKSTGWVSVGMTGYSHAPVVQVTIAQTAKPDIELISIAATFERLGVNV*
Ga0068858_1006757483	3300005842	Switchgrass Rhizosphere	LVTPVVRNTGWVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV*
Ga0068860_1018561802	3300005843	Switchgrass Rhizosphere	SFRNTMWVSIGLMGFSHAPIVQVTVAQQAKPDVELIAIAATFEQAGVTV*
Ga0068862_1022252271	3300005844	Switchgrass Rhizosphere	PARNRPANRNTMWVSIGKTGFSHAPIVQVTVAQQAKPDVELVAIAAIFEVAGTNV*
Ga0066651_100125144	3300006031	Soil	VRLSPVRNTLWVSIGMTGFAHAPIVQVTVAQQATPDVELLALSTTYERAGVNV*
Ga0075363_1005737702	3300006048	Populus Endosphere	VTRPAIRNTMWVSIGQTGFVHAPIVQVTIGQQAKPNVELIAIAATYEPAAINV*
Ga0097621_1005699013	3300006237	Miscanthus Rhizosphere	WDAGTPPPLVVRNTGWVSIGLTGFSHAPVVQVTVAQQAKPEVDLISIAATYERAGVNV*
Ga0097621_1020648392	3300006237	Miscanthus Rhizosphere	PPGPPTQRTTLWQSIGMSGFAHAPIVQVTVAQTSRPRVELIAITTTQERGGVNV*
Ga0097621_1022588192	3300006237	Miscanthus Rhizosphere	GDAIWDAGTPPPLVVRNTGWVSIGITGFSHAPIVQVTVAQNAKPEVDLISIAATFERAGINV*
Ga0068871_1009571933	3300006358	Miscanthus Rhizosphere	LWDKGIPHPNVVRNTGWVSIGMTGFSHAPIVQVTVAQQAKPEVDLISIAATYERDAVVV*
Ga0068871_1020277641	3300006358	Miscanthus Rhizosphere	VVRNTGWVSIGLTGFSHAPVIQVTVAQNAKPEVDLISIAATYERAGVNV*
Ga0068871_1021141322	3300006358	Miscanthus Rhizosphere	LTGFSHAPIVQVTMAQQAKPEIELISVAGTFERLAITV*
Ga0074060_109429313	3300006604	Soil	PTMRNTGWVSIGETGYSHAPVVQVTVAQQAKPTVELVSMTATYERLGVNV*
Ga0074062_130193172	3300006606	Soil	SIGMTGFAHAPIVQVMVAQRAKPQVELLAIAATFDRAGVNV*
Ga0075434_1018257571	3300006871	Populus Rhizosphere	AHAPIVQVYVGQQARPDVELVALGATYEIAGVNV*
Ga0068865_1005829321	3300006881	Miscanthus Rhizosphere	LSLPSIRSTGWVSIGETGFSHAPIVQTTIAQQARPNVELISISAMYERVGVNV*
Ga0105098_103788722	3300009081	Freshwater Sediment	KTGFSHAPIVQVTVAQQAKPDVELVAIAATFEVAGTNV*
Ga0111539_103267302	3300009094	Populus Rhizosphere	RASFRNTMWVSIGMTGFSHAPIVQVTVAQQAKPDVELIAIAATFEQEGVTV*
Ga0111539_125725112	3300009094	Populus Rhizosphere	TPGRASFRNTMWVSIGMTGFSHAPIVQVTVAQQAKPDVELIAIAASFEQEGVTV*
Ga0105245_103870191	3300009098	Miscanthus Rhizosphere	PAPVVRDTGWVSVGLTGYSHAPIVQVTVAQQAKPEVDLISVAATYERAGINV*
Ga0105245_107566441	3300009098	Miscanthus Rhizosphere	KPVVRNTGWVSIGMTGFSHAPIVQVTVAQQAKPEVDLISIAATYERDAVVV*
Ga0105245_107971051	3300009098	Miscanthus Rhizosphere	MSGFAHAPIVQVTVAQVARPRVELIAIATTQERGGVNV*
Ga0105245_108139142	3300009098	Miscanthus Rhizosphere	GFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV*
Ga0105245_114470892	3300009098	Miscanthus Rhizosphere	HWDYPTPPRASFRNTMWVSIGLMGFSHAPIVQVTVAQQAKPDVELIAIAATFEQAGVTV*
Ga0105245_118570182	3300009098	Miscanthus Rhizosphere	AGTPPPLVVRNTGWVSIGLTGFSHAPVVQVTVAQNAKPEVDLISIAATFERAGVNV*
Ga0105245_124383682	3300009098	Miscanthus Rhizosphere	VSVGMTGYSHAPVVQVMVAQTAKPSVELVSITAVYERCGVNV*
Ga0105243_123746821	3300009148	Miscanthus Rhizosphere	TTVRNTMWVSIGYTGFSHAPICQVTIAQAALPDVELISIAATYDAAGVNV*
Ga0111538_111726871	3300009156	Populus Rhizosphere	TPVVRNTGWVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV*
Ga0111538_126700051	3300009156	Populus Rhizosphere	GFSHAPIVQVTVAQQAKPEVDLISIAATFERAGINV*
Ga0111538_134035511	3300009156	Populus Rhizosphere	IGMTGFSHAPIVQVTVAQQAKPDVELIAIAATFEQEGVTV*
Ga0105242_102041485	3300009176	Miscanthus Rhizosphere	WVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV*
Ga0105242_111669773	3300009176	Miscanthus Rhizosphere	SIGMSGFAHAPIIQVTIAQTLRPEVELVAVTATFEVAGVNV*
Ga0105242_122723141	3300009176	Miscanthus Rhizosphere	SIGLTGFSHAPIVQVTVAQQAKPEVDLISIAATYERAGVNV*
Ga0105242_131742642	3300009176	Miscanthus Rhizosphere	FSHAPICQVTIAQAALPDVELISIAATYAAAGVNV*
Ga0105248_116223382	3300009177	Switchgrass Rhizosphere	SHAPICQVTVAQQAPPEVELISIAATFEPAGVNV*
Ga0105248_124751372	3300009177	Switchgrass Rhizosphere	DAGTPPPLVVRNTGWVSIGITGFSHAPIVQVTVAQNAKPEVDLISIAATFERAGINV*
Ga0105248_133174872	3300009177	Switchgrass Rhizosphere	MWVSIGETGFSHAPIVQVTIGQQFKPSVELISISATYIRMAANV*
Ga0105238_100025861	3300009551	Corn Rhizosphere	NTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV*
Ga0105238_123131732	3300009551	Corn Rhizosphere	MWVSIGYTGFSHAPICQVTIAQASPPDVELISIAATYDAAGVNV*
Ga0105340_12581802	3300009610	Soil	ANRNTMWVSIGKTGFSHAPIVQVTVAQQAKPDVELVAIAATFEVAGTNV*
Ga0105252_105713002	3300009678	Soil	DALWDEGVPHPNVVRNTGWVSIGMTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV*
Ga0126377_107286162	3300010362	Tropical Forest Soil	MWVSIGMTGFSHAPVVQATIAQQAKPNVELIAISAVFERCGINV*
Ga0105246_118290861	3300011119	Miscanthus Rhizosphere	WVSIGYTGFSHAPICQVTVAQQARPEVELISIAATFEPAGVNV*
Ga0105246_125109521	3300011119	Miscanthus Rhizosphere	QSIGMSGFAHAPIVQVTVAQVARPTVELIAIATTQERGGVNV*
Ga0137312_10134523	3300011400	Soil	DQPTAVAAPAVRSTGWVSIGKSGFVHAPIVQVTVAQQVKPSVELIAIAATFEPGGINV*
Ga0137312_10142922	3300011400	Soil	SIGTTGYSHAPIVQITVAQTAKPEVDLISIAATFERAGVNV*
Ga0137312_10242192	3300011400	Soil	AMSGFAHAPIVQVTVAQQARPRVELIAISTTQESGGVNV*
Ga0137325_10278072	3300011415	Soil	LRNTMWVSIGKTGFSHAPIVQVTIAQQAKPTVELVSIAATFERAGVTV*
Ga0137425_10984642	3300011422	Soil	DDAMWDKGIPHPNVVRNTGWVSIGMTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV*
Ga0137423_11917583	3300011430	Soil	LWDANPPPKPTVRNTGWVSIGQTGFSHAPIVQITMAQQAKPQVELISIGVTYERAGANV*
Ga0137432_11875412	3300011439	Soil	TYAQWDTGVTPLPVVRNTGWVSIGLTGYTHAPIVQVTVAQQARPEVDLISIACTYERDGINV*
Ga0137437_11747471	3300011442	Soil	RNTLWVSIGKTGFSHAPIVQVTVAQAARPDVELVAIGATFEVAGVNV*
Ga0137344_10440602	3300012159	Soil	WVSIGKTGFSHAPIVQVTVAQQAKPDVELVAIAATFEVAGTNV*
Ga0157305_100343751	3300012891	Soil	NTGWVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV*
Ga0157303_100697222	3300012896	Soil	RNTGWVSIGMTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV*
Ga0157293_101252181	3300012898	Soil	RPQNRNTLWVSVGMSGFAHAPIIQVTIAQTLRPEVELVAVTATFEVAGVNV*
Ga0157299_102893382	3300012899	Soil	LWDQPGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV*
Ga0157288_101243192	3300012901	Soil	IGPDPGPLDLWGQGLWDTALWDADPPPAPVVRNTGWVSVGVTGFTHAPILQIMVSQQAKPEVDFISVSATYGRAGINV*
Ga0157289_100210722	3300012903	Soil	FAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV*
Ga0157289_100771411	3300012903	Soil	QPARNRPANRNTMWVSIGKTGFSHAPIVQVTVAQQAKPDVELVAIAAIFEVAGTNV*
Ga0157296_102545792	3300012905	Soil	PQNRNTLWVSIGMSGFAHAPIIQVTIAQTLRPEVELVAVTATFEVAGVNV*
Ga0157286_104056922	3300012908	Soil	WDQGKWGQAMWDAETPAKPTARNTGWVSIGMTGFSHAPVVQATVAQQTRPEVEMISIAGTFERLGITI*
Ga0157290_103918942	3300012909	Soil	SIWDAGTPPPPVVRNTGWVSIGMTGYSHAPIVQVTVAQQAKPEVEIISIAATYERVGVNV
Ga0157298_103686992	3300012913	Soil	PPQVVRNTGWVSIGQTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV*
Ga0157298_103797541	3300012913	Soil	PSPARPANRNTMWVSIGKTGFSHAPIVQVTVAQQAKPDVELVCLQATFEQAGINV*
Ga0157378_114256701	3300013297	Miscanthus Rhizosphere	GYSHAPLVQVTIAQTAKPDIELISIAATFERLGVNV*
Ga0163162_106852662	3300013306	Switchgrass Rhizosphere	NTGWVSIGRTGFSHASIVQVTVAQQAKPEVDLISIAATFERAGVNV*
Ga0157375_103201904	3300013308	Miscanthus Rhizosphere	SIGMTGFSHAPIVQVTVAQLTKPEVDLINIAATFERDAIVV*
Ga0157375_112514592	3300013308	Miscanthus Rhizosphere	FSHAPVVQVTVAQQAKPEVDLISIAATYERAGVNV*
Ga0163163_107579091	3300014325	Switchgrass Rhizosphere	SVVRNTGWVSIGMTGFSHAPIVQVTVAQQLKPEVDLISIAATYERDAVVV*
Ga0163163_123420441	3300014325	Switchgrass Rhizosphere	DAGVPPKPVVRNTGWVSIGMTGYSHAPIVQVTVAQNARPVVDLISIAAIFERAGINV*
Ga0163163_127625731	3300014325	Switchgrass Rhizosphere	FAHAPIVQVYVGQQARPDVELVALGATYELAGVNV*
Ga0157380_119166631	3300014326	Switchgrass Rhizosphere	NTGWVSIGMTGFSHAPIVQVQVAQQAKPIVDLINIAATFERAGVNV*
Ga0157380_124248861	3300014326	Switchgrass Rhizosphere	PLVVRNTGWVSIGLTGFSHAPVVQVTVAQQAKPEVDLISIAATYERAGVNV*
Ga0157380_133431141	3300014326	Switchgrass Rhizosphere	LWDDALWDEGVPHPNVVRNTGWVSIGMTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV*
Ga0157379_106333721	3300014968	Switchgrass Rhizosphere	TGFSHAPICQVTIAQQSAPDIELISIAATYDGAGVNV*
Ga0157376_100382931	3300014969	Miscanthus Rhizosphere	NTGWVSIGMTGFSHAPIVQVTVAQQTKPEVDLINIAATFERDAIVV*
Ga0157376_116495862	3300014969	Miscanthus Rhizosphere	LTGFSHAPVVQVTVAQQAKPEVDLISIAATFERAGVNV*
Ga0173480_105190701	3300015200	Soil	NTMWVSIGKSGFCHAPIVQITVAQQVKPDVELVAITATFEQGGVNV*
Ga0173478_100242762	3300015201	Soil	MWVSIGKTGFSHAPIVQVTVAQQAKPDVELVAIAATFEVAGTNV*
Ga0132258_121948831	3300015371	Arabidopsis Rhizosphere	GWVSIGVTGHSHAPIVQLTIAQNSRPVFDLIAIGATFKRMGINV*
Ga0132255_1019152682	3300015374	Arabidopsis Rhizosphere	DAGTPSAPVVRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGINV*
Ga0182036_110904382	3300016270	Soil	GFSHAPVVQVTVSQKVKPNVELICISALFERAGINV
Ga0163161_102201691	3300017792	Switchgrass Rhizosphere	AAYAQWDQPGLGRPPHRNTLWVSIGMTSFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV
Ga0163161_110130541	3300017792	Switchgrass Rhizosphere	MTGYSHAPVVQVTVAQQAKPDVELISIAATFERLGVNV
Ga0163161_117390012	3300017792	Switchgrass Rhizosphere	AYAQWDTGVPPKPVVRNTGWVSIGQTGYSHAPVVQVTVAQAAKPEVDLISIAATFERAGVNV
Ga0184611_13175961	3300018067	Groundwater Sediment	FTHAPIVQVTVGQQVKPTVEMIAIAATYERAGFTV
Ga0184611_13477761	3300018067	Groundwater Sediment	NTGWVSIGSTGYSHALTVQVTVAQQAKPDVELIAIDALFWPVGTDV
Ga0184611_13539081	3300018067	Groundwater Sediment	ASLGALTQRNTLWQSIGMSGFAHAPIVQVTVAQSSRPRVELIAITTTQERGGVNV
Ga0184635_103320871	3300018072	Groundwater Sediment	SIGKTGFSHAPIVQVTVAQQAKPDVELVAIAATFEVAGVNV
Ga0184624_103510362	3300018073	Groundwater Sediment	GRAPIRNTLWVSIGKTGFSHAPIVQVTIGQQSKPDVELIAVGATFEVAGVNV
Ga0184624_105230401	3300018073	Groundwater Sediment	PATGRPPVRNTMWQSIGMSGFAHAPIVQVQIGQVARPTVELIAIGTTQERGGVNV
Ga0184625_101028663	3300018081	Groundwater Sediment	KTGFSHAPILQVSVAQKIKPAVELVAIHAIFEQGGVNV
Ga0184625_102841322	3300018081	Groundwater Sediment	WVSIGMTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV
Ga0184628_101692061	3300018083	Groundwater Sediment	QWDAGVARNAVIRNTGWVSIGVTGYTHAPIVQVMVAQHARPVVEIISVDATFERLGVNV
Ga0184628_102791641	3300018083	Groundwater Sediment	WDDALWDEGVPHPNVVRNTGWVSIGMTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV
Ga0190274_114740112	3300018476	Soil	RNTGWVSIGLTGYTHAPIVQVTVAQKSRPDVELIAIDATFERMGVNV
Ga0190274_115328702	3300018476	Soil	MWVSIGKTGFSHAPIVQVTVAQQAKPDVELVAIAATFEVAGVNV
Ga0190271_118304902	3300018481	Soil	WDVAVWDGAPAPAHVVRNTGWVSIGVTGYSHAPIVQVRVAQASKPQVDLISIAATFERAGMNV
Ga0190271_123821711	3300018481	Soil	TMWVSVGMTGFSHAPIVQVTVAQQAKPDVELIAIAATFEQEGVTV
Ga0173482_100818942	3300019361	Soil	GMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0193740_10127182	3300020009	Soil	PTNVVRNTGWVSIGQTGFTHAPIIQVYVAQQAKPEVDLIAIAATFERAGITV
Ga0193696_10716943	3300020016	Soil	WVSIGMTGFSHAPIVQVTVAQQAKPEVDLISIAATYERDAVVV
Ga0193699_103312261	3300021363	Soil	ASAPVSRAQNTGWVSIGMTGYSHAPIVQVTVSQQAKPIVDLISIAATFERDAVVV
Ga0210392_109733181	3300021475	Soil	SIGATGFSHAPVLQVTVAQQAKPNVELISIAATFERLGVNV
Ga0247787_10640622	3300022893	Soil	TPVVRNTGWVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV
Ga0247795_10012361	3300022899	Soil	LWDQESALVTPVVRNTGWVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV
Ga0247783_12009862	3300022911	Plant Litter	NVVRNTGWVSIGMTGFSHAPIVQVTVAQQARPVVDLINIAATFERAGVNV
Ga0247790_100800361	3300022915	Soil	PARPANRNTMWVSIGKTGFSHAPIVQVTVAQQAKPDVELVCLQATFEQAGINV
Ga0247790_101918031	3300022915	Soil	FSHAPIVQVTMAQNAKPEVELISIAGTFERLAITV
Ga0247777_11704752	3300022917	Plant Litter	DEGVPHPNVVRNTGWVSIGMTGFSHAPIVQVTVAQQAKPVVDLINIAATFERAGVNV
Ga0247743_10025841	3300023067	Soil	VRNTGWVSIGETGFSHAPIVQVAVAQQGKPNVELISIAAMYEKLGANV
Ga0247758_11478722	3300023079	Plant Litter	PAIRSTRWVSIGTTGYTHAPVVQVTVAQTARPTVEMVAIDAVFERQGVNV
Ga0247661_10234431	3300024254	Soil	GRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV
Ga0247661_10944901	3300024254	Soil	ATVRNTMWVSIGFTGFSHAPICQVTIAQAALPDVELISIAATYDAAGVNV
Ga0247670_10972772	3300024283	Soil	TPVMKNTMWVSVGETGFSHAPIVQVTVAQQATPNVELISIGATYERLGVNV
Ga0247687_10609942	3300024286	Soil	MWVSVGETGFSHAPIVQVTVAQQATPNVELISIGATYERLGVNV
Ga0247681_10046812	3300024310	Soil	DAPGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV
Ga0247681_10509732	3300024310	Soil	VSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0207642_103499301	3300025899	Miscanthus Rhizosphere	GLWDDAVWDASTPPKPVVRNTGWVSIGMTGFSHAPVVQVTVAQQAKPEVDLISIAATYERDAVVV
Ga0207685_101891272	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VSIGFTGFSHAPICQVTIAQQSAPDIELISIAATYDGAGVNV
Ga0207671_101190094	3300025914	Corn Rhizosphere	GWVSIGLTGYSHAPVVQVTVAQQAKPDVELISISAVYERLGVNV
Ga0207650_105268922	3300025925	Switchgrass Rhizosphere	ALWDQPGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0207659_104531182	3300025926	Miscanthus Rhizosphere	TPVVRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV
Ga0207687_111708032	3300025927	Miscanthus Rhizosphere	PPPLVVRNTGWVSIGLTGFSHAPVVQVTVAQNAKPEVDLISIAATFERGGINV
Ga0207687_113903152	3300025927	Miscanthus Rhizosphere	SVRSTGWVSVGMTGYSHAPVVQVMVAQTAKPSVELVSITAVYERCGVNV
Ga0207700_112473191	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TGFSHAPVVQVTVAQAARPNVELISIAATFERLGVNV
Ga0207701_101606262	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RNTLWVSIGKTGFSHAPIVQVTVGQQAKPDVELVAIAAIFEVAGTNV
Ga0207701_105248012	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RNTGWVSIGMTGYSHAPIVQVSVGQQAKPEVDLISIAATFERDGVNV
Ga0207644_113276202	3300025931	Switchgrass Rhizosphere	RNTGWVSIGLTGFSHAPVVQVTVAQNAKPIVDMISIAATFERAGVNV
Ga0207686_115755951	3300025934	Miscanthus Rhizosphere	VRNTMWVSIGMTGYSHAPIVQVTVAQNARPIVDLISIAATFERAGVNV
Ga0207669_101625551	3300025937	Miscanthus Rhizosphere	TTGWVSIGITGFSHAPIVQVTVGQNARPNVELISIDALYTRGGVNV
Ga0207669_110866801	3300025937	Miscanthus Rhizosphere	NTMWVSIGKTGFSHAPIVQVTVGQQAKPDVELVAIAATFEVAGTNV
Ga0207704_108419992	3300025938	Miscanthus Rhizosphere	GASASLNLSDEALSDDAIWDAGVTPIAVVRNTGWVSIGMTGYSHAPVVQVTVAQQARPQVDLISIAATFERCGITV
Ga0207704_118937282	3300025938	Miscanthus Rhizosphere	VRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV
Ga0207691_101097822	3300025940	Miscanthus Rhizosphere	VSIGVTGYSHAPIIQVTVAQRARPQVDLISIAATFERCGITV
Ga0207711_107110152	3300025941	Switchgrass Rhizosphere	GLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYELAGVNV
Ga0207651_110159591	3300025960	Switchgrass Rhizosphere	PHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0207651_110462472	3300025960	Switchgrass Rhizosphere	VVRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV
Ga0207651_114910941	3300025960	Switchgrass Rhizosphere	WVSIGLTGFSHAPVVQVTVAQQAKPEVDLISIAATYERAGVNV
Ga0207651_119629861	3300025960	Switchgrass Rhizosphere	SIGKTGFSHAPIVQVTIGQQAKPDVELIAVGATFEVAGVNV
Ga0207712_110282721	3300025961	Switchgrass Rhizosphere	TPPPLVVRNTGWVSIGLTGFSHAPVVQVTVAQQAKPEVDLISIAATYERAGVNV
Ga0207668_101169833	3300025972	Switchgrass Rhizosphere	VSVGMTGYSHAPVVQVTIAQTAKPDIELISIAATFERLGVNV
Ga0207677_114204931	3300026023	Miscanthus Rhizosphere	VPTVRNTMWVSIGMTGFSHAPICQVTIAQQSAPDIELISIAATYDGAGVNV
Ga0207702_107367361	3300026078	Corn Rhizosphere	FSHAPIVQTTIAQQARPNVELISISAMYERVGVNV
Ga0207641_107222763	3300026088	Switchgrass Rhizosphere	MTGYSHAPICQVTVAQTAKPNVELLAIAAVYDPAGVNV
Ga0207648_119504542	3300026089	Miscanthus Rhizosphere	APPSVTVRNTGWVSIGVTGYSHAPIIQVTVAQRARPQVDLISIAATFERCGITV
Ga0207648_121679691	3300026089	Miscanthus Rhizosphere	IWDAGTPPPLVVRNTGWVSIGLTGFSHAPVIQVTVAQNAKPEVDLISIAATFERAGVNV
Ga0207676_111915062	3300026095	Switchgrass Rhizosphere	MWVSIGKTGFSHAPIVQVTVAQQAKPDVELVCLQATFEQAGINV
Ga0207675_1009821503	3300026118	Switchgrass Rhizosphere	VKSTGWVSVGMTGYSHAPVVQVTIAQTAKPDIELISIAATFERLGVNV
Ga0207675_1011512451	3300026118	Switchgrass Rhizosphere	VTGYTHAPIVQITVGQIAKPSVELVAIDVTYQRAGVNV
Ga0207675_1017845071	3300026118	Switchgrass Rhizosphere	SGFAHAPVVQVTIAQIARPAVELVALHTTQERGGVNV
Ga0207683_101993213	3300026121	Miscanthus Rhizosphere	PSTPAVRNTGWVSIGRTGFSHAPIVQVTVAQQAKPEVDLISIAATFERAGVNV
Ga0207683_102060823	3300026121	Miscanthus Rhizosphere	VPPAKTVTNTGWVSIGMTGFSHAPIVQVTVAQAVRPEVDLINIAATYERDAIVV
Ga0207683_103339251	3300026121	Miscanthus Rhizosphere	VGLTGYSHAPIVQVTVAQQAKPEVDLISVAATYERAGINV
Ga0207461_10137162	3300026929	Soil	NTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0208890_10511232	3300027523	Soil	ETGYSHAPVVQVTVAQQAKPTVELVSMTATYERLGVNV
Ga0208185_10757231	3300027533	Soil	TGWVSIGTTGYSHAPIVQITVAQTAKPEVDLISIAATFERAGVNV
Ga0209811_100249741	3300027821	Surface Soil	LWVSIGKTGFAHAPIIQVTVAQQRTPDVELIALTATYEPAGVNV
Ga0209465_102538972	3300027874	Tropical Forest Soil	WVSIGMTGFAHAPIVQVTVAQQAKPNVELIALAATFERAGVNV
Ga0207428_107132721	3300027907	Populus Rhizosphere	PGQAPAKNTMWVSVGETGFSHAPICQVTVGQQAKPDVELISISATFVRMGANV
Ga0247689_10104701	3300028281	Soil	GRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0247662_10028241	3300028293	Soil	LWDQPGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0268265_108546952	3300028380	Switchgrass Rhizosphere	DQPGLGRPPHRNTLWVSIGMTGFAHAPIVQVYVGQQARPDVELVALGATYEIAGVNV
Ga0307321_11217532	3300028704	Soil	YSHAPIVQVTVSQQAKPIVDLISIAATFERDAVVV
Ga0307283_102460791	3300028790	Soil	EAYAQWDTGVTPLPVIRNTGWVSIGLTGFSHAPIVQITVAQKLKPEVDLINIAATFERDGVNV
Ga0307281_102026601	3300028803	Soil	VSIGMTGYSHAPIVQVSVGQQAKPEVDLISIAATFERDGVNV
Ga0247825_112506252	3300028812	Soil	QPAPTTVPIRNTRWVSIGRTGYTHAPVVQVYVGQQARPEVELIAIDVTFNRMGVTV
Ga0247827_112769841	3300028889	Soil	VSIGKSGFAHAPIVQVQVAQQAKPNVELIALHTTQETGGVNV
Ga0307497_101282821	3300031226	Soil	WDAGEPLSPIVGNTGWVSIGLTGFSHAPIIQVTMAQQAKPEVELISIAGVFERLAITV
Ga0307497_101686543	3300031226	Soil	KNTGWVSIGEVGFSHAPICQVTVAQQGNPNVELVSIAATFERLGVNV
Ga0307505_102875011	3300031455	Soil	GYSHAPVVQVTMHQRAKPDVELISISATYERCGVNV
Ga0310887_105410571	3300031547	Soil	SIGETGFSHAPIVQVTIAQQAKPNVELISIAAMYEKLGANV
Ga0307468_1006523482	3300031740	Hardwood Forest Soil	NVNRNTMWVSVGMSGFSHAPIVQITVAQQATPDVELVAIAATYERAGINV
Ga0318548_103328602	3300031793	Soil	GFTHAPVVQATISQQAKPNIELISISAAFERAGINV
Ga0318565_101665952	3300031799	Soil	VRNTMWVSIGRTGFSLAPVVQVTVAQRAPPEVELITVNAVFDRAGIDV
Ga0318505_101840612	3300032060	Soil	VRNTMWVSIGVTGFTHAPVVQATVSQQAKPNIELISISAAFERAGINV
Ga0318524_107633361	3300032067	Soil	TMWVSIGVTGFTHAPVVQATISQQAKPNIELISISAAFERAGINV
Ga0307472_1025410832	3300032205	Hardwood Forest Soil	TAIWDAGVAPPKVVRNTGWVSIGVTGFSHAPVVQVTVAQQARPEVDLISIAATFERMGIN
Ga0364929_0089959_790_960	3300034149	Sediment	AAAAPKPVVRNTGWVSIGMTGFSHAPIVQVTVAQQAKPEVDLISIAATYERDAVVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F022902

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences