Metagenome / Metatranscriptome Family F023979

Basic Information
Family ID	F023979
Family Type	Metagenome / Metatranscriptome
Number of Sequences	208
Average Sequence Length	44 residues
Representative Sequence	FFETEDDYRRGDETLNAMPAGDTPGRRTSVTKYDVAIRMTS
Number of Associated Samples	176
Number of Associated Scaffolds	208

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.83 %
% of genes near scaffold ends (potentially truncated)	48.56 %
% of genes from short scaffolds (< 2000 bps)	48.56 %
Associated GOLD sequencing projects	172
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (53.365 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.269 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.481 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.84% β-sheet: 0.00% Coil/Unstructured: 81.16%
Feature Viewer

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Pfam ID	Name	% Frequency in 208 Family Scaffolds
PF04029	2-ph_phosp	6.25
PF07883	Cupin_2	5.29
PF01872	RibD_C	2.88
PF08241	Methyltransf_11	1.92
PF00291	PALP	1.44
PF02082	Rrf2	1.44
PF00072	Response_reg	1.44
PF01070	FMN_dh	1.44
PF04134	DCC1-like	1.44
PF13602	ADH_zinc_N_2	0.96
PF00005	ABC_tran	0.96
PF05988	DUF899	0.96
PF01266	DAO	0.96
PF03320	FBPase_glpX	0.96
PF03992	ABM	0.96
PF00356	LacI	0.96
PF13561	adh_short_C2	0.48
PF03795	YCII	0.48
PF01979	Amidohydro_1	0.48
PF12680	SnoaL_2	0.48
PF13545	HTH_Crp_2	0.48
PF02080	TrkA_C	0.48
PF02628	COX15-CtaA	0.48
PF08327	AHSA1	0.48
PF04234	CopC	0.48
PF12681	Glyoxalase_2	0.48
PF01553	Acyltransferase	0.48
PF03972	MmgE_PrpD	0.48
PF00857	Isochorismatase	0.48
PF07508	Recombinase	0.48
PF01545	Cation_efflux	0.48
PF01370	Epimerase	0.48
PF07040	DUF1326	0.48
PF07452	CHRD	0.48
PF13847	Methyltransf_31	0.48
PF00571	CBS	0.48
PF04542	Sigma70_r2	0.48
PF06983	3-dmu-9_3-mt	0.48
PF00174	Oxidored_molyb	0.48
PF03737	RraA-like	0.48
PF00378	ECH_1	0.48
PF03476	MOSC_N	0.48
PF11799	IMS_C	0.48
PF13671	AAA_33	0.48
PF02417	Chromate_transp	0.48
PF04066	MrpF_PhaF	0.48
PF14342	DUF4396	0.48
PF14534	DUF4440	0.48
PF11139	SfLAP	0.48
PF00462	Glutaredoxin	0.48
PF16861	Carbam_trans_C	0.48
PF14378	PAP2_3	0.48
PF13191	AAA_16	0.48
PF00730	HhH-GPD	0.48
PF13489	Methyltransf_23	0.48
PF01113	DapB_N	0.48
PF00282	Pyridoxal_deC	0.48
PF00903	Glyoxalase	0.48
PF05721	PhyH	0.48
PF03459	TOBE	0.48
PF08031	BBE	0.48
PF02687	FtsX	0.48
PF13340	DUF4096	0.48
PF07690	MFS_1	0.48
PF11131	PhrC_PhrF	0.48
PF13343	SBP_bac_6	0.48
PF14907	NTP_transf_5	0.48
PF01734	Patatin	0.48
PF01042	Ribonuc_L-PSP	0.48
PF04261	Dyp_perox	0.48
PF05496	RuvB_N	0.48
PF00532	Peripla_BP_1	0.48
PF06723	MreB_Mbl	0.48
PF00202	Aminotran_3	0.48
PF06772	LtrA	0.48
PF02580	Tyr_Deacylase	0.48
PF07885	Ion_trans_2	0.48

COG ID	Name	Functional Category	% Frequency in 208 Family Scaffolds
COG2045	Phosphosulfolactate phosphohydrolase or related enzyme	Coenzyme transport and metabolism [H]	12.50
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.88
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.88
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.44
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	1.44
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	1.44
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	1.44
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.44
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.44
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	1.44
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	1.44
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	1.44
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.44
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	1.44
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	0.96
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.96
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.48
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.48
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.48
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.48
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.48
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	0.48
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.48
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.48
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	0.48
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.48
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.48
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.48
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.48
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.48
COG2212	Multisubunit Na+/H+ antiporter, MnhF subunit	Inorganic ion transport and metabolism [P]	0.48
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.48
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.48
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.48
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	0.48
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.48
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.48
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.48
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.48
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.48
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.48
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.48
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.48
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.48
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.48
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.48
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.48
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.48
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.48
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.48
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.48
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.48
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.48
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.48
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.48
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.48

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
All Organisms	root	All Organisms	46.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
cellular organisms	root	All Organisms → cellular organisms	46.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.67 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.58 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.21 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.71 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.33 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.96 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.48 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.88 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.48 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	0.48 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.48 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.48 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.48 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.48 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.87 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.96 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.96 %
Halorubraceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae	0.48 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.48 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.48 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	0.48 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.48 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.48 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.48 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.87 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.96 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.96 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	0.48 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.48 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.48 %
Salinigranum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Salinigranum	0.48 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.48 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.48 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.48 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.87 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.96 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	0.48 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.48 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.48 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.48 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.48 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.48 %
Salinigranum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Salinigranum	0.48 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.48 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.87 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.96 %
Pseudonocardia sp. S2-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. S2-4	0.48 %
Actinomadura sp. KC06	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. KC06	0.48 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.48 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	0.48 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.48 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.48 %
Salinigranum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Salinigranum	0.48 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.48 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.48 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725004\|GPKC_F5OHE3B02JN6FP	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	531	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0517996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	861	Open in IMG/M
3300000956\|JGI10216J12902_115643981	Not Available	581	Open in IMG/M
3300003987\|Ga0055471_10106933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	824	Open in IMG/M
3300004114\|Ga0062593_100602669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1048	Open in IMG/M
3300004153\|Ga0063455_100058911	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1365	Open in IMG/M
3300004156\|Ga0062589_102544065	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300004157\|Ga0062590_102000305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300004479\|Ga0062595_100487755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300004643\|Ga0062591_101645781	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005179\|Ga0066684_10085717	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300005179\|Ga0066684_11128192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005338\|Ga0068868_100586912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300005343\|Ga0070687_100757106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300005356\|Ga0070674_100319978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1243	Open in IMG/M
3300005441\|Ga0070700_101806517	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005445\|Ga0070708_101697908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	587	Open in IMG/M
3300005445\|Ga0070708_102276955	All Organisms → cellular organisms → Bacteria → Terrabacteria group	500	Open in IMG/M
3300005533\|Ga0070734_10877164	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005538\|Ga0070731_10593992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300005546\|Ga0070696_101935700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005713\|Ga0066905_101833402	Not Available	560	Open in IMG/M
3300005764\|Ga0066903_102090340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. S2-4	1090	Open in IMG/M
3300005843\|Ga0068860_100116834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2552	Open in IMG/M
3300005937\|Ga0081455_10366790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1011	Open in IMG/M
3300006028\|Ga0070717_12097740	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006163\|Ga0070715_10057829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1691	Open in IMG/M
3300006581\|Ga0074048_10064178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2932	Open in IMG/M
3300006581\|Ga0074048_10690251	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300006581\|Ga0074048_13198304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300009148\|Ga0105243_11256112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300009162\|Ga0075423_12003915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300009177\|Ga0105248_12967869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300009545\|Ga0105237_12208081	Not Available	560	Open in IMG/M
3300009553\|Ga0105249_11361710	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300009553\|Ga0105249_11772883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300009553\|Ga0105249_12793193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300009789\|Ga0126307_11389356	Not Available	569	Open in IMG/M
3300009789\|Ga0126307_11678578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300010040\|Ga0126308_10251211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1150	Open in IMG/M
3300010045\|Ga0126311_10729160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300010373\|Ga0134128_11835236	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300010373\|Ga0134128_12341621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300010398\|Ga0126383_13128968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300010403\|Ga0134123_13208033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300011119\|Ga0105246_10467808	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300012001\|Ga0120167_1112596	All Organisms → cellular organisms → Bacteria → Terrabacteria group	550	Open in IMG/M
3300012209\|Ga0137379_11779557	Not Available	511	Open in IMG/M
3300012210\|Ga0137378_11086927	All Organisms → cellular organisms → Bacteria → Terrabacteria group	714	Open in IMG/M
3300012350\|Ga0137372_10273931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1318	Open in IMG/M
3300012357\|Ga0137384_10873197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300012530\|Ga0136635_10073479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300012685\|Ga0137397_10474844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932	Open in IMG/M
3300012915\|Ga0157302_10001646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4742	Open in IMG/M
3300012930\|Ga0137407_11670511	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	607	Open in IMG/M
3300012938\|Ga0162651_100095700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012989\|Ga0164305_11244726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300013772\|Ga0120158_10107498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1655	Open in IMG/M
3300014272\|Ga0075327_1089079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300015372\|Ga0132256_102329230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300015374\|Ga0132255_100555837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1692	Open in IMG/M
3300016270\|Ga0182036_11095869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300018031\|Ga0184634_10353603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300018060\|Ga0187765_11068724	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300018071\|Ga0184618_10161579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300018429\|Ga0190272_10455001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1069	Open in IMG/M
3300018469\|Ga0190270_10037551	All Organisms → cellular organisms → Bacteria	3235	Open in IMG/M
3300018476\|Ga0190274_12590178	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300018920\|Ga0190273_11703599	Not Available	569	Open in IMG/M
3300019377\|Ga0190264_10728995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300019767\|Ga0190267_10471420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300020080\|Ga0206350_10699128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	591	Open in IMG/M
3300021080\|Ga0210382_10204886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300021972\|Ga0193737_1057506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300022898\|Ga0247745_1045430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	685	Open in IMG/M
3300025567\|Ga0210076_1142658	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300025792\|Ga0210143_1016544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1295	Open in IMG/M
3300025908\|Ga0207643_11069595	Not Available	521	Open in IMG/M
3300025916\|Ga0207663_10983234	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300025919\|Ga0207657_11385408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. KC06	529	Open in IMG/M
3300025961\|Ga0207712_10460599	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300025961\|Ga0207712_11432271	Not Available	618	Open in IMG/M
3300026075\|Ga0207708_10117163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2073	Open in IMG/M
3300026078\|Ga0207702_11703731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300027993\|Ga0247749_1019578	Not Available	717	Open in IMG/M
3300028589\|Ga0247818_10685405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300028715\|Ga0307313_10202866	All Organisms → cellular organisms → Bacteria → Terrabacteria group	615	Open in IMG/M
3300028719\|Ga0307301_10035765	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300028787\|Ga0307323_10070411	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1243	Open in IMG/M
3300028796\|Ga0307287_10128966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300028799\|Ga0307284_10309574	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300028803\|Ga0307281_10218312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300028814\|Ga0307302_10412584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300028824\|Ga0307310_10399082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300028828\|Ga0307312_10245286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1158	Open in IMG/M
3300028878\|Ga0307278_10358812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300028884\|Ga0307308_10522678	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Salinigranum	569	Open in IMG/M
3300030904\|Ga0308198_1087863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300031736\|Ga0318501_10404622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300031740\|Ga0307468_100146501	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300031831\|Ga0318564_10385796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300031911\|Ga0307412_11008067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300031939\|Ga0308174_11788169	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031995\|Ga0307409_101282494	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300032012\|Ga0310902_10840975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300033550\|Ga0247829_10616460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.77%
Host-Associated	Host-Associated	18.75%
Engineered	Engineered	0.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.48%
Plants	Host-Associated → Plants	18.75%
Aquatic	Environmental → Aquatic	5.29%
Modeled	Engineered → Modeled	0.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Sediment	Environmental → Aquatic → Sediment	2.40%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Marine	Environmental → Aquatic → Marine	1.44%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.48%
Roots	Host-Associated → Plants → Roots	0.48%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.02%
Loam	Environmental → Terrestrial → Soil → Loam	8.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.40%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.44%
Ice	Environmental → Aquatic → Freshwater → Ice	0.96%
Sand	Environmental → Terrestrial → Soil → Sand	0.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.48%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.48%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.48%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.48%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.48%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.48%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.48%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.48%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.48%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.48%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.48%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.48%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.48%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.48%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.48%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.48%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_04515890	2067725004	Soil	SSSSGNEDDYRAGDEILNAMPAGDTPGRRSDVAKYQVAYRMTR
FNTS007_06135970	2119805009	Soil	EAEKSVVIVFFETEDDYRRGDAVLNAMPADETPGRRTSVARYDVALRMTV
cont_0749.00003540	2166559005	Simulated	MAIVFFDNEDDYQTGDEFLSAMPTSDTPGRRTSVTKHEVAVRAMG
ICChiseqgaiiDRAFT_05179961	3300000033	Soil	TEDDYRRGDEVLAAMPADQTPGQRASVTKYEVAVRATP*
ICChiseqgaiiDRAFT_24066811	3300000033	Soil	LHDVATNSALAIVFFDSXDDXATGDAALSAMPAGDTPGRRTSVTKYDVVARMTS*
ICChiseqgaiiFebDRAFT_111286482	3300000363	Soil	EAEKTQVILFFEDEDAYKRGDEVLNAMPAGDTPGQRTSVTRYDVVQRMTT*
JGI10216J12902_1025161583	3300000956	Soil	GKALAVVFFDNEDDYAQGDAALSAMSPGDTPGTRVSVTKYDVVARRTV*
JGI10216J12902_1156439811	3300000956	Soil	LVVLFFENEDDYRRGDETLNAMPASDTPGQRTSVAKYNVAMRMSD*
A10PFW1_119826681	3300001538	Permafrost	VIVFFETEEDYQRGDEMLSAMPAGDTPGRRTSVTKYDVATRMTA*
C688J18823_100188885	3300001686	Soil	MPFFGADDGYRRGDEALNAVPTGDTPGRRTSVTKYNVALRMSV*
Ga0055471_101069332	3300003987	Natural And Restored Wetlands	FFDNEDDYRAGDEILNAMPAGDTPGRRSSVAKYQVAHRMTR*
Ga0063454_1001788102	3300004081	Soil	FFGADDGYRRGDEALNAVPTGDTPGRRTSVTKYNVALRMSV*
Ga0062593_1006026691	3300004114	Soil	VFFDSEDDYARGDEVLSAMPAGDTPGKRTSVTKYDVVTRMTP*
Ga0062593_1006754211	3300004114	Soil	DKAVAILFFANDDDYQKGDEILNAMPASDTPGRRTSVTKYEVAMRMSG*
Ga0063455_1000589112	3300004153	Soil	LFFDNEDDYRRGDEALNAMPAGDTPGKRTSVTKFDVAFRMAD*
Ga0062589_1025440652	3300004156	Soil	DQSVVILFFENEDDYRQGDETLNAMPTTDTPGQRTSVTKYQVAFRMAGD*
Ga0062590_1016989351	3300004157	Soil	DAAAGKALAVVFFDNEDDYAKGDAALNAMAPGDTPGTRVSVTKYDVVARRTV*
Ga0062590_1020003051	3300004157	Soil	AEKSVVILFFETENDYAQGDAALSAMPASDTPGQRTSVGKYEVAFRMTD*
Ga0062595_1004877551	3300004479	Soil	DAEKAVVVLFFDSEEDYRQGDEALNAMPAEDTPGKRSSVKKYDVVHRQTV*
Ga0062595_1006805492	3300004479	Soil	ADNALVILFFETEDDYRRGDEMLNAMPAEDTPGRRVSAKKHDVAIRMTD*
Ga0062595_1008027711	3300004479	Soil	VILFFENEADYKRGDEALDAMPASDTPGRRTSVSKYQVTLRMQS*
Ga0062595_1024387551	3300004479	Soil	VIVFFDSEDDYARGDEVLSAMPAADTPGQRTSVTKYDVVTRMTP*
Ga0062591_1014741923	3300004643	Soil	DAAAGKALAVVFFDNEDDYAKGDAALNAMAPGDTPGTRVSVTKYDVAARRTV*
Ga0062591_1016457813	3300004643	Soil	FDSEEDYRQGDEALNAMPAEDTPGKRSSVKRYDVVHRQTV*
Ga0066679_105673442	3300005176	Soil	VFFETEDDYRRGDEILSAMPAGDTPGRRTSVTKYDVATRMKS*
Ga0066688_104581721	3300005178	Soil	IVFFETEEDYARGDEVLNAMPADDTPGRRSSVTKYEVATRMTV*
Ga0066684_100857171	3300005179	Soil	DNEDDYRRGDEALNAMPAGDTPGKRTSVAKYQVAFRMAD*
Ga0066684_111281921	3300005179	Soil	FFASEDDYRRGDETLNAMPAGDTPGRRTSVAKYDVAIRMTT*
Ga0066675_103920832	3300005187	Soil	FETEDDYRRGDETLNAMPAGDTPGRRTSVTKYDVAIRMTS*
Ga0068868_1005869122	3300005338	Miscanthus Rhizosphere	FFDSEEDYRQGDETLNAMPAGDTPGQRTGVAKYEVAVRMAV*
Ga0070687_1007571061	3300005343	Switchgrass Rhizosphere	LFFDSEEDYRQGDETLNAMPAGDTPGQRSGVAKYEVAVRMAV*
Ga0070674_1003199781	3300005356	Miscanthus Rhizosphere	FATEEDYRQGDAILSAMPADETPGERTSVTKYEVAVRASM*
Ga0070700_1018065171	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	EKSLVVIFFDDEDAYRRGDEILSAMPAGDTPGSRSGVAKYDVAIRMSL*
Ga0070708_1016979081	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SLVILFFDTEEDYQRGDEALNAMPAGDTPGTRTSVAKYQVAFRMTD*
Ga0070708_1022769552	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VFFENEDDYKRGDEALNAMPAGDTPGKRASVTKYDVAFRMTD*
Ga0070734_108771642	3300005533	Surface Soil	FFDSEDDYRRGDATLDAMPAGDTPGRRTSVGKYDVVVHLKV*
Ga0070731_105939921	3300005538	Surface Soil	DYRRADEALNAMPAGDTPGKRTSVAKYQVAFRMTD*
Ga0070696_1019357001	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AEKSLVILFFENEDDYEQGDKTLSAMPAGDTPGKRTSVAKYEVAFRMTD*
Ga0070693_1011773861	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	AIVFFENEDEYRKGDEVLGSMDAGDTPGRRTGVTKYQVATRMTA*
Ga0066695_108093212	3300005553	Soil	EDEYRKGDEILGGMPTGDTPGRRTGVTKYQVATRMTA*
Ga0066670_101140871	3300005560	Soil	FFETEDDYRRGDETLNAMPAGDTPGRRTSVTKYDVAIRMTS*
Ga0066706_108505771	3300005598	Soil	ETEDDYRRGDETLNAMPAGDTPGRRTSVTKYDVAIRMTS*
Ga0066905_1018334021	3300005713	Tropical Forest Soil	VVMFFDNEADYARGDETLNAMPAGDTPGTRTSVGKYEVALRVTS*
Ga0066903_1020903401	3300005764	Tropical Forest Soil	VIFFDNDEDYQRGDAMLSAMPAGDTPGSRTSVKKLDVAMRQTM*
Ga0068860_1001168341	3300005843	Switchgrass Rhizosphere	DYNRGDEMLNAMPAGDTPGKRTSVTRHDVAHRMKS*
Ga0081455_103667901	3300005937	Tabebuia Heterophylla Rhizosphere	LVILFFETEEDYRRGDETLNAMPADETPGKRTSVTRYDVAVRMTR*
Ga0070717_120977402	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EDDYARGDAALSAMPAGDTPGTRTSVTKYNVAFRMAD*
Ga0066651_108187553	3300006031	Soil	GEKSLVVVFFETEDDYRRGDEFLSSMPAGDTPGRRTSVTKYDVAIRMNS*
Ga0066652_1005464651	3300006046	Soil	AIVIFDSEDDYRRGHEILDSMPSDNTPGKRTSVTKYDVATRMTS*
Ga0066652_1009976502	3300006046	Soil	FFENEDDYRRGDEALSAMPGSDTPGRRTSVTKYDVAIRMSD*
Ga0070715_100578291	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	KSLVVVIFETEDDYNRGDEMLNAMPAGDTPGKRTSVTRHDVAHRMKS*
Ga0075014_1008179691	3300006174	Watersheds	SLVVLFFETEDDYRRGDQVLTAMPADDTPGRRTSVTRYDVAVRMTA*
Ga0097621_1017528531	3300006237	Miscanthus Rhizosphere	ANEGDYQKGDEILGGMDTSDTPGTRTGVTKYDVAVRMTA*
Ga0074048_100641787	3300006581	Soil	LVVVFFENEADYKTGDETLSAMPAGDTPGKRTSVAKYNVAFRMAD*
Ga0074048_106902513	3300006581	Soil	FFDSEEDYRQGDAALNALPADDTPGKRSSVKKYDVVHRQTV*
Ga0074048_131983041	3300006581	Soil	LVVVFFETEDDYRRGDEALNAMPAGDTPGERTSVAKYQVAFRMAD*
Ga0066653_103015741	3300006791	Soil	SLVIIFFESEEDYRKGDEILSAMPADETPGRRTSVAKYDVATRMTS*
Ga0075428_1015778912	3300006844	Populus Rhizosphere	DSEEDYRQGDETLNAMDAGETPGQRTGVAKYEVAMRMAT*
Ga0075428_1024403052	3300006844	Populus Rhizosphere	SLVLIFFDTEEDYAKGDEILNAMPAGDTPGRRTSVTKYEVVARRSV*
Ga0075421_1000690387	3300006845	Populus Rhizosphere	EDDYRQGDETLNAMPAGDTPGQRSSVTKYEVAMRMTP*
Ga0075430_1008272361	3300006846	Populus Rhizosphere	DYATGDAALNAMPTGDTPGRRTSVRKYDVVGRMTA*
Ga0075420_1000912551	3300006853	Populus Rhizosphere	YKRGDATLSAMPAGDTPGKRTSVTKYEVAIRMNA*
Ga0075434_1002751211	3300006871	Populus Rhizosphere	EKSLAIVFFDSEDAYRRGDEILNAMPSGDTPGQRTSVRRYDVAIRMTP*
Ga0079215_100383703	3300006894	Agricultural Soil	LAILFFDNEDDYARGDEMLNAMPAGDTPGRRTSVTKYDVATRMTT*
Ga0066709_1007715615	3300009137	Grasslands Soil	ETEDDYRKGDEALNAMPACETPVRRSSVTKYDVAIRMKD*
Ga0066709_1035788332	3300009137	Grasslands Soil	VLFFENEDDYRKGDEVLGGMPTEDTPGRRTSVTKYQVATRRTV*
Ga0114129_114918011	3300009147	Populus Rhizosphere	RSLVILFFDNEDDYRQGDEILSAMPAGDTPGRRSGVAKYEVAHRMTAERQA*
Ga0105243_112561122	3300009148	Miscanthus Rhizosphere	YKRGDEALNAMPAGDTPGNRSSVTKYQVAFRMAE*
Ga0111538_121799311	3300009156	Populus Rhizosphere	VIVFFDNEDDYQRGDAVLSAMPAGDTPGQRTGVAKYDVAIRMAT*
Ga0075423_120039151	3300009162	Populus Rhizosphere	MKSLVVLFFDTDDDYQRGDEALDAMPASDTPGKRTSVTKYQVAFRMTD*
Ga0105248_129678692	3300009177	Switchgrass Rhizosphere	FFDNEADYADADAALSAMPSDETPGRRTSVAKYDVAMRMKA*
Ga0105237_122080812	3300009545	Corn Rhizosphere	VVLYDAGAEKALVTLFFDSEEDYRSSDEVLNAMPADETPGRRASVTKYAVALRETL*
Ga0105238_100292381	3300009551	Corn Rhizosphere	SVAIVFFDNEDDYAQGDVTLGAMPSDDTPGKRVSVGKYEVAARVSV*
Ga0105249_113617101	3300009553	Switchgrass Rhizosphere	AVVVVFFDSEEDYRQGDEALNAMPAEDTPGKRSSVKKYDVVHRQTV*
Ga0105249_117728832	3300009553	Switchgrass Rhizosphere	FDSEEDYRQGDETLNAMPAGDTPGQRSGVAKYEVAVRMAV*
Ga0105249_127931932	3300009553	Switchgrass Rhizosphere	FFETEDDYKRGDEALNAMPAGDTPGKRTSVTKYQVAFRMTD*
Ga0126307_113893561	3300009789	Serpentine Soil	EDDYRAGDEVLNAMPAGDTPGQRASVTKYDVAVRMAV*
Ga0126307_116785781	3300009789	Serpentine Soil	LVILFFDNEDDYRRGDEALNAMPAGDTPGQRTSVAKYEVAVRMAE*
Ga0126307_117328822	3300009789	Serpentine Soil	FFDNDEDYRRGDEVLSAMPAGETPGRRTSVRRYDVPMRMTM*
Ga0126313_1000172012	3300009840	Serpentine Soil	VVLFFESEDDYKRGDEVLNAMPAGDTPGRRTSVTKYEVAARMTP*
Ga0126313_101836121	3300009840	Serpentine Soil	ERSLVILFFETEDDYRRGDEVLSAMPAGDTPGRRTSVTKYDVAARMTT*
Ga0126308_102512111	3300010040	Serpentine Soil	DDDYRRGDEALNAMPAGDTPGQRTSVAKYEVAMRMTE*
Ga0126314_102855792	3300010042	Serpentine Soil	VVVFFDNEDDYRQGDEALSAMPAAETPGRRTSVTKYNVAFRMAE*
Ga0126311_107291603	3300010045	Serpentine Soil	VILFFDNEDDYRRGDEALNAMPAGDTPGQRTSVAKYEVAMRMTE*
Ga0134088_106142161	3300010304	Grasslands Soil	EQSLVILFFETEDDYRRGDETLNAMPAGDTPGRRTSVAKYDVALRMVADRQT*
Ga0134084_102513791	3300010322	Grasslands Soil	EKSLVIVFFESEDDYRRGDEILSAMPADDTPGRRTSVAKYDVATRMSS*
Ga0134128_118352361	3300010373	Terrestrial Soil	KSLVILFFETEADYQRGDEALNAMPAGDTPGKRTSVAKYQVAFRLTD*
Ga0134128_123416211	3300010373	Terrestrial Soil	ADYKKGDAALNAMPAGETPGKRTSVTKYDVAIRMTD*
Ga0134126_116320921	3300010396	Terrestrial Soil	AAGKALAVVFFDNEDDYAQGDAALSAMAPGDTPGTRISVTKYDVVARRTV*
Ga0126383_131289682	3300010398	Tropical Forest Soil	ILFFENEDDYKRGDEALNAMPAADTPGTRTAVTKYEVAFRMTD*
Ga0134122_127551531	3300010400	Terrestrial Soil	LVILFFETEDDYRRGDEMLNAMPAGDTPGRRLSAKKHDVAIRMTD*
Ga0134123_132080331	3300010403	Terrestrial Soil	LVVVIFETDDDYNRADEIMNAMPAGDTPGKRTSVTRYDVAHRMKS*
Ga0105246_104678082	3300011119	Miscanthus Rhizosphere	YDAGAEKALVTLFFDSEEDYRSSDEVLNAMPADETPGRRASVTKYAVALRETL*
Ga0105246_109082931	3300011119	Miscanthus Rhizosphere	HDAAAGKALAVVFFDNEDDYAKGDAALNAMAPGDTPGTRVSVTKYDVVARRTV*
Ga0120167_11125961	3300012001	Permafrost	DEDYQRGDEALRAMPAGDTPGQRTSVAKYQVAFRMTD*
Ga0120174_11419522	3300012008	Permafrost	AEKSLAIVFFETEDDYKRGDEMLSAMPAGETPGRRTSVTKYDVATRMTA*
Ga0120152_10357531	3300012011	Permafrost	PEAEKSLAIVFFETEDDYKRGDEMLSAMPAGDTPGRRTSVTKYDVATRMTV*
Ga0136634_103811193	3300012046	Polar Desert Sand	MLHDPATDAALAVLFFDSEDDYATGDAALSAMPAGDTPGRRTSVTKYE
Ga0137374_100329111	3300012204	Vadose Zone Soil	AEKSLVILFFETEDDYKRGDEVLNAMPADDTPGRRTSVAKFDVATRMTV*
Ga0137374_104002891	3300012204	Vadose Zone Soil	AEKSLVILFFETEDDYKRGDEVLNAMPADDTPGRRTSVAKYDVATRMTV*
Ga0137379_110039012	3300012209	Vadose Zone Soil	MFFETEDDYRRGDEVLNAMPAGDTPGRRTSVTKYDVATRMTV*
Ga0137379_117795572	3300012209	Vadose Zone Soil	ENEDDYRLGDETLNAMPAGDTPGQRTSVTKYDVAIRMTA*
Ga0137378_110869273	3300012210	Vadose Zone Soil	FDTDDDYRRGDEALNAMPAGDTPGKRASVTKYEVAFRMTD*
Ga0137372_102739311	3300012350	Vadose Zone Soil	TEDDYERGDEALNAMPAGDTPGKRTSVTKYDVAVRMTN*
Ga0137371_111942901	3300012356	Vadose Zone Soil	PEAEKSLVILFFETEDDYRRGDEMLNAMPAGDTPGRRTSVTKYNVATRMTS*
Ga0137384_108731972	3300012357	Vadose Zone Soil	EKSLVILFFDTEDDYQRGDAALNAMPTGDTPGQRSSVTKYEVAFRMTD*
Ga0157327_10577612	3300012512	Arabidopsis Rhizosphere	VFFDNEDDYARGDEILNAMPAGDTPGQRTGVTKYDVVTRMTP*
Ga0136635_100734791	3300012530	Polar Desert Sand	LVIVFFENEDDYKTGDETLSAMPAGDTPGKRTSVGKYQVAFRVTE*
Ga0137397_104748443	3300012685	Vadose Zone Soil	ETDDDYQRGDEALSAMPAGDTPGQRTSVAKYQVAFRMTG*
Ga0157302_1000164610	3300012915	Soil	LFFGNEDDYRAGDEILNAMPAGDTPGRRSDVAKYQVAYRMTQ*
Ga0137394_111833681	3300012922	Vadose Zone Soil	DTSLAIVFFETEDDYRRGDEILSAMPAGDTPGRRTSVTKYDVATRMKS*
Ga0137407_116705112	3300012930	Vadose Zone Soil	FFDTEDDYRRGDEILNAMPAGDTPGQRKSVTKYDVAIRMTE*
Ga0162651_1000957001	3300012938	Soil	VVVIFDNEDDYRKRDEILNAMPAGDTPGQRTSVAKYQVAFRMTD*
Ga0164300_103675681	3300012951	Soil	LVLVFFDSEDDYRKGDEALSAMPAGDTPGRRTSVKKYELAARVTG*
Ga0164299_111772031	3300012958	Soil	EDYRQGDAVLSAMPAGDTPGRRTSVTRYEVAVRRTA*
Ga0134087_103955542	3300012977	Grasslands Soil	QALAIVFFENEDEYRKGDEILGGMPTGDTPGRRTGVTKYQVATRMTA*
Ga0164309_114651522	3300012984	Soil	FFENEEDYRQGDAVLSAMPAGDTPGRRTSVTRYEVAVRRTA*
Ga0164305_103034271	3300012989	Soil	IVFFENEEDYRQGDAVLSAMPAGDTPGRRTSVTRYEVAVRRTA*
Ga0164305_112447261	3300012989	Soil	SLVILFFETEADYKQGDETLSAMPAGDTPGKRTSVTKYEVAFRMTD*
Ga0157372_134391282	3300013307	Corn Rhizosphere	FFENEDAYKRGDVALSAMPAGETPGRRTSVATYNVALRMAD*
Ga0120158_101074986	3300013772	Permafrost	YRRGDEALNAMPAGETPGSRSSVTKYDVAVRMTA*
Ga0134079_104415602	3300014166	Grasslands Soil	VFFESEDDYRRGDEILSAMPADDTPGRRTSVAKYDVATRMSS*
Ga0075327_10890791	3300014272	Natural And Restored Wetlands	YRRGDEALNAMPAGDTPGRRSSVARYDVAVRMSD*
Ga0157376_113125301	3300014969	Miscanthus Rhizosphere	EDDYAKGDAALNAMDTGDTPGRRTSVTKYKVAGRMTA*
Ga0182006_12270422	3300015261	Rhizosphere	VFFDSEDDYRTGDEFLNAMPASDTPGRRTSVTKHDVAVRVMG*
Ga0132256_1023292302	3300015372	Arabidopsis Rhizosphere	LAILFFETDDDYRKGDAALNAMPADETPGSRSSVTKYDVAIRMTA*
Ga0132255_1005558373	3300015374	Arabidopsis Rhizosphere	FFESEDDYRRGDEALNAMPAGDPPGQRSSVTKYSVAHRMATAPH*
Ga0182036_110958691	3300016270	Soil	KSLVLLFFDNDDDYRRGDDALNAMPASDTPGQRTAVSKYQVAFRITD
Ga0187779_109975501	3300017959	Tropical Peatland	NEDDYWKGDEVLGSMPASDTPGRRTSVTKHDVAVRVMA
Ga0184634_103536031	3300018031	Groundwater Sediment	LFFETDDEYKRGDEALSAMPAADTPGRRTSVTKYQVAFRMAE
Ga0184621_100453703	3300018054	Groundwater Sediment	KSLVILFFETEDDYRRGDEMLNAMPAGDTPGRRTSVTKYNVATRMTS
Ga0187765_110687241	3300018060	Tropical Peatland	EMMVLHDGEAEKAVVVLFFDSDEDYRQGDEALNAMPADETPGRRSSVARYDVVIRETV
Ga0184618_101615791	3300018071	Groundwater Sediment	KSLAILFFETEDDYKRGDEALNAMPAGDTPGQRTSVTKYDVAIRMSG
Ga0190272_104550013	3300018429	Soil	SLVILFFDNEDDYKRGDETLNAMSAGDTPGERTSVTRYDVPIRMTV
Ga0066662_110890982	3300018468	Grasslands Soil	SVAIVIFDSEDDYRRGHEILDSMPGDNTPGKRTSVTKYDVATRMTS
Ga0190270_100375516	3300018469	Soil	DSEDDYRRGDEALNAMPTDDTPGQRTSVTKYDVAVRVSS
Ga0190270_113891152	3300018469	Soil	VFFDTEDDYRQGDAVLSAMPTGDTPGRRVSVEKYEVPIRVTV
Ga0190274_121721133	3300018476	Soil	VIVFFDNEDDYRKGDEALNAMPAGDTPGRRTSVEKFEVPIRMVN
Ga0190274_125901781	3300018476	Soil	AEKSLVILFFDSEEDYRQGDETLNAMPAGDTPGQRSGVAKYKVAVRMDV
Ga0190273_117035992	3300018920	Soil	DDYTRGDEALNAMPAGDTPGQRTSVAKYEVASRMTA
Ga0190264_107289952	3300019377	Soil	FENEDDYRRGDEALSAMPTGDTPGKRTSVSKYEVAFRMTD
Ga0190267_104714201	3300019767	Soil	ILFFDSEEDYRQGDEALNAMPATDTPGQRTSVKKYQVAVRMTD
Ga0193700_10415951	3300019873	Soil	AERSGAIVFFETEEGYRRGDEILNAMPAGETPGQRKSVTKYDVAIRMTT
Ga0193741_10784622	3300019884	Soil	ALAVLFFDSEDDYAAGDAALDAMPAGDTPGRRTSVTKYDVVARMTG
Ga0197907_109317911	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	QALAIVFFENEDEYRKGDEVLGSMDTGDTPGRRTGVTKYQVATRMTA
Ga0206350_106991281	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	EDDYRAGDEILNAMPAGDTPGRRSDVAKYQVAYRMTQ
Ga0210382_102048861	3300021080	Groundwater Sediment	ADYKQGDDALNAMPAGDTPGKRASVTKYEVAFRMTD
Ga0193737_10575063	3300021972	Soil	DEDYRRGDEALSAMPAGDTPGQRTSVAKYQVAFRMTG
Ga0247745_10454301	3300022898	Soil	TEDDYRRGDEALNAMPGGDTPGKRTSVAKYQVAFRMTE
Ga0247751_10117483	3300023069	Soil	VFFDNEDDYRQGDEALNAMPTGDTPGRRTSVTKYDVPVRMTS
Ga0210076_11426581	3300025567	Natural And Restored Wetlands	LVFFETEDDYRRGDAALNAMPADETPGRRTSVKKYNVALRMTG
Ga0210143_10165441	3300025792	Natural And Restored Wetlands	DYRRGDEALNAMPAGDTPGRRSSVARYDVAVRMSD
Ga0207688_106281912	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TEDDYTQGDAVLSAMPTGDTPGRRVSVEKYAVPVRRTA
Ga0207643_110695951	3300025908	Miscanthus Rhizosphere	ILFFENEDDYKTGDETLSAMPASDTPGTRTSVAKYQVAFRMAD
Ga0207663_109832341	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VILFFDTEDDYERGDEALSAMPADETPGKRTSVAKYQVAFRMRD
Ga0207663_112065991	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VLLIFETEDDYRVGDEFLNAMPAGDTPGRRTSVTKYEVALRMASTHS
Ga0207660_105044522	3300025917	Corn Rhizosphere	VVIFFDSEDDYVRGDEALNAMPAGETPGRRTSVAKYDVAIRESG
Ga0207657_113854081	3300025919	Corn Rhizosphere	ILFFDNDDDYARGDAALNAMPIGDTPGRRASVTKYQVAFRMTD
Ga0207661_106189231	3300025944	Corn Rhizosphere	VFFENEDEYRKGDEVLGSMDTGDTPGRRTGVTKYQVATRMTA
Ga0207712_104605992	3300025961	Switchgrass Rhizosphere	VILFFDSEEDYRQGDETLNAMPAGDTPGQRSGVAKYEVAVRMAV
Ga0207712_114322712	3300025961	Switchgrass Rhizosphere	PEGLKAKEIVVLYDAGAEKALVTLFFDSEEDYRSSDEVLNAMPADETPGRRASVTKYAVALRETL
Ga0207708_101171634	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VILFFDSEEDYRQGDETLNAMPAGDTPGQRSGVAKYDVAVRMAV
Ga0207702_108459112	3300026078	Corn Rhizosphere	IVFFENEDEYRKGDEVLSSMDAGDTPGRRTGVTKYQVATRMTA
Ga0207702_117037311	3300026078	Corn Rhizosphere	DSEEDYRQGDEALNAMPAEDTPGKRSSVKKYDVVHRQTV
Ga0207648_118575772	3300026089	Miscanthus Rhizosphere	QAVVVVFFETEDDYRRGDEILSAMPAGETPGRRTSVNKYDVAARATP
Ga0209234_12435011	3300026295	Grasslands Soil	PQADTSLAIVFFETEDDYRRGDEILSAMPAGDTPGRRTSVTKYDVATRMKS
Ga0209803_12285472	3300026332	Soil	VILFFETDDDYKRGDEVLNAMPAGDTPGRRTSVTKYNVATRMTV
Ga0209059_11995952	3300026527	Soil	AILFFDNDDDYKRGDDALNAMPTDDTPGRRTSVTKYDVAVRMTG
Ga0209874_10070321	3300027577	Groundwater Sand	LVILFFETEDDYRHGDEVLNAMPADDTPGRRTSVTKYDVATRMTV
Ga0209068_103495831	3300027894	Watersheds	VLFFETEDDYRRGDQVLTAMPADDTPGRRTSVTRYDVAVRMTA
Ga0247749_10195781	3300027993	Soil	GNEDDYRAGDEILNAMPAGDTPGRRSDVAKYQVAYRTTQ
Ga0247818_106854052	3300028589	Soil	FDSEEDYRQGDETLNAMPAGDTPGQRSGVAKYDVAVRMAV
Ga0247822_102060841	3300028592	Soil	EILILHDAATDSALAIVFFDSDDDYATGDAALSAMPAGDTPGRRTSVTKYDVVARMTS
Ga0307313_102028661	3300028715	Soil	DYQRGDAALSAMPAGDTPGQRTSVAKYQVAFRMTD
Ga0307311_102208311	3300028716	Soil	VVLFFESEDDYRQGDETLNAMPAGDTPGQRSSVTKYEVAMRMTP
Ga0307301_100357651	3300028719	Soil	LFFESDDDYQRGDEALNAMPASDTPGQRTSVAKYQVAFRMTD
Ga0307320_100613344	3300028771	Soil	ESEDDYRQGDETLNAMPAGDTPGQRSSVTKYEVAVRMTP
Ga0307323_100704111	3300028787	Soil	DMSLAILFFESEDDYATGDAALNAMPTADTPGQRTSVTKYDVVMRMVD
Ga0307287_101289663	3300028796	Soil	VILFFETDDDYQRGDEALNAMPASDTPGQRTSVAKYQVAFRMTD
Ga0307284_103095743	3300028799	Soil	ILFFDTDEDYQRGDAALSAMPAGDTPGQRTSVAKYQVAFRMTD
Ga0307281_102183121	3300028803	Soil	FESEDDYRRGDEALNAMPTTDTPGQRTSVTKYQVAFRMAD
Ga0307305_104421091	3300028807	Soil	IVFFETEDDYKRGDEMLSAMPAGDTPGRRSSVTKYDVATRMTA
Ga0307292_103604891	3300028811	Soil	EKSLVILFFETEDDYRRGDEMLNAMPAGDTPGRRTSVTKYNVATRMTS
Ga0307302_104125842	3300028814	Soil	ILFFDTDEDYQRGDAALSAMPADDTPGQRTSVAKYQVAFRMTD
Ga0307302_106785401	3300028814	Soil	FESEDDYRQGDETLNAMPAGDTPGQRSSVTKYEVAMRMTP
Ga0307310_103990822	3300028824	Soil	TDEDYKRGDEILNAMPAGDTPGKRTSVTRYDVAHRMKS
Ga0307312_102452861	3300028828	Soil	VLFFETEADYKQGDDALNAMPAGDTPGKRASVTKYEVAFRMTD
Ga0307289_102776573	3300028875	Soil	VAIVFFDNEDDYRQGDEALNAMPTGDTPGRRTSVTKYDVPVRMTS
Ga0307278_103588121	3300028878	Soil	LVIVFFETDDDYQRGDEALSAMPAGDTPGQRTSVSKYQVAFRMTD
Ga0307308_105226782	3300028884	Soil	AVVILFFETEDDYQRGDEILNAMPAGETPGQRKSVTKYDVAIRMTT
Ga0307308_105708082	3300028884	Soil	VILFFGTEDDYRRGDETLNAMPAGDTPGRRTSVTKYNVATRMT
Ga0308202_11364111	3300030902	Soil	SLVVVFFDSEDDYQRGDEALDAMPADDTPGRRTSVAKYDVAIRMTP
Ga0308198_10878632	3300030904	Soil	SLVIVMFETDDDYRRGDEILSAMPAGDTPGKRTSVTKYDVGTRMKS
Ga0299913_103526791	3300031229	Soil	AIVFFETEEDYERGDEVLSAMPADDTPGRRTSVARYDVALRMTP
Ga0170819_170144332	3300031469	Forest Soil	ETEDEYRVGDEFLNAMPTGDTPGRRTSVTKYDVALRMTPTHT
Ga0310813_111050371	3300031716	Soil	LAIVFFENEDEYRKGDEVLGSMDTGDTPGRRTGVTKYQVATRMTA
Ga0318501_104046222	3300031736	Soil	VLPFFESEDDYQRGDEVLNAMPASDTPGRRTSVTRYEVAFRLSN
Ga0307468_1001465011	3300031740	Hardwood Forest Soil	DAERSVVIIFFDSEEDYRRGDEILGAMPADETPGKRTGVQKYDVPLRMTM
Ga0318564_103857962	3300031831	Soil	SLVVMFFDNEDDYALGDATLNAMPAGDTPGQRTGVAKYDVALRVTA
Ga0307412_110080671	3300031911	Rhizosphere	EDDYAKGDAALNAMPAGDTPGRRSSVKKYDVAFRMAQ
Ga0308174_117881692	3300031939	Soil	LVILFFETEADYQRGDEALNAMPAGDTPGKRTSVAKYQVAFRLTD
Ga0307409_1012824941	3300031995	Rhizosphere	DAEKSVVVLFFDSEEDYRQGDETLSAMDAGDTPGQRTGVAKYEVAMRMAT
Ga0310902_108409751	3300032012	Soil	SVVIVFFDNEDDYRTGDEALNAMPAGDTPGTRTSVAKYEVPIRMAT
Ga0335085_113596242	3300032770	Soil	EDDYRRGDETLNAMPAGDTPGRRTSVQKYDVALRMSI
Ga0247829_106164601	3300033550	Soil	SVVIVFFDSEDDYAKGDAALSAMPAGDTPGRRTSVKKYEVAFRMAE
Ga0247830_102485684	3300033551	Soil	TDSALAIVFFDSDDDYATGDAALSAMPAGDTPGRRTSVTKYDVVARMTP
Ga0314864_0036898_1_138	3300033805	Peatland	LVVVFFDNEDDYRKGDEFLSAMPAGDTPGRRSSVARYDVALRMTQ
Ga0314788_090871_2_136	3300034666	Soil	VVVFFETEDDYRRGDEILSAMPAGETPGRRTSVNKYDVAARATP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F023979

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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