Metagenome / Metatranscriptome Family F025541

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F025541
Family Type	Metagenome / Metatranscriptome
Number of Sequences	201
Average Sequence Length	46 residues
Representative Sequence	MTLVLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRTAYIPPS
Number of Associated Samples	100
Number of Associated Scaffolds	201

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.00 %
% of genes near scaffold ends (potentially truncated)	37.81 %
% of genes from short scaffolds (< 2000 bps)	89.05 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.662 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.318 % of family members)
Environment Ontology (ENVO)	Unclassified (57.711 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.164 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 201 Family Scaffolds
PF00188	CAP	1.99
PF00293	NUDIX	1.99
PF06577	EipA	1.99
PF13505	OMP_b-brl	1.99
PF13356	Arm-DNA-bind_3	1.49
PF04392	ABC_sub_bind	1.00
PF06233	Usg	1.00
PF00589	Phage_integrase	0.50
PF02735	Ku	0.50
PF14602	Hexapep_2	0.50
PF00753	Lactamase_B	0.50
PF07690	MFS_1	0.50
PF09588	YqaJ	0.50
PF01527	HTH_Tnp_1	0.50
PF00036	EF-hand_1	0.50
PF03401	TctC	0.50
PF12071	DUF3551	0.50
PF07784	DUF1622	0.50
PF00118	Cpn60_TCP1	0.50
PF16363	GDP_Man_Dehyd	0.50
PF04226	Transgly_assoc	0.50
PF04773	FecR	0.50
PF00211	Guanylate_cyc	0.50

COG ID	Name	Functional Category	% Frequency in 201 Family Scaffolds
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	1.99
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.00
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.50
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.50
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.50
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.50
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.50
COG4828	Uncharacterized membrane protein	Function unknown [S]	0.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
All Organisms	root	All Organisms	32.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
cellular organisms	root	All Organisms → cellular organisms	32.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.41 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.00 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.50 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.98 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.49 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.00 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.00 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.50 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.50 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.48 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.49 %
Pandoraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea	1.00 %
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	1.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.00 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.50 %
Methylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter	0.50 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.49 %
Clostridiales bacterium NK3B98	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium NK3B98	1.00 %
Pandoraea thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea → Pandoraea thiooxydans	1.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.00 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.50 %
Methylobacter tundripaludum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter tundripaludum	0.50 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.50 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.66 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2.49 %
Clostridiales bacterium NK3B98	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium NK3B98	1.00 %
Pandoraea thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea → Pandoraea thiooxydans	1.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.00 %
Methylobacter tundripaludum SV96	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter tundripaludum → Methylobacter tundripaludum SV96	0.50 %
Bradyrhizobium sp. cir1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cir1	0.50 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.50 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.50 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10008644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2428	Open in IMG/M
3300003505\|JGIcombinedJ51221_10008806	Not Available	3217	Open in IMG/M
3300004633\|Ga0066395_10013017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3135	Open in IMG/M
3300005179\|Ga0066684_10919876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium NK3B98	570	Open in IMG/M
3300005332\|Ga0066388_100057875	All Organisms → cellular organisms → Bacteria → Proteobacteria	4069	Open in IMG/M
3300005332\|Ga0066388_100508720	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300005332\|Ga0066388_100907326	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300005332\|Ga0066388_101142214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1324	Open in IMG/M
3300005332\|Ga0066388_105338916	Not Available	652	Open in IMG/M
3300005332\|Ga0066388_107023787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium NK3B98	566	Open in IMG/M
3300005332\|Ga0066388_107626614	Not Available	542	Open in IMG/M
3300005332\|Ga0066388_108346509	Not Available	516	Open in IMG/M
3300005363\|Ga0008090_15541836	Not Available	617	Open in IMG/M
3300005363\|Ga0008090_15876442	Not Available	1587	Open in IMG/M
3300005363\|Ga0008090_15892331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1184	Open in IMG/M
3300005560\|Ga0066670_10182002	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300005764\|Ga0066903_100718020	Not Available	1766	Open in IMG/M
3300005764\|Ga0066903_100949052	Not Available	1564	Open in IMG/M
3300005764\|Ga0066903_101688594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300005764\|Ga0066903_102199733	Not Available	1063	Open in IMG/M
3300005764\|Ga0066903_102560872	Not Available	988	Open in IMG/M
3300005764\|Ga0066903_102688254	Not Available	965	Open in IMG/M
3300005764\|Ga0066903_103001631	Not Available	914	Open in IMG/M
3300005764\|Ga0066903_103386508	Not Available	861	Open in IMG/M
3300005764\|Ga0066903_104069716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	783	Open in IMG/M
3300005764\|Ga0066903_104181841	Not Available	772	Open in IMG/M
3300005764\|Ga0066903_104267221	Not Available	764	Open in IMG/M
3300005764\|Ga0066903_105328951	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005764\|Ga0066903_105358413	Not Available	677	Open in IMG/M
3300005764\|Ga0066903_107346989	Not Available	569	Open in IMG/M
3300006046\|Ga0066652_100673644	Not Available	982	Open in IMG/M
3300006086\|Ga0075019_10906466	Not Available	566	Open in IMG/M
3300006175\|Ga0070712_101579446	Not Available	574	Open in IMG/M
3300006755\|Ga0079222_10174498	Not Available	1257	Open in IMG/M
3300006806\|Ga0079220_12087673	Not Available	507	Open in IMG/M
3300010043\|Ga0126380_10278965	Not Available	1175	Open in IMG/M
3300010048\|Ga0126373_10005181	Not Available	10089	Open in IMG/M
3300010048\|Ga0126373_11700292	Not Available	695	Open in IMG/M
3300010358\|Ga0126370_11619183	Not Available	620	Open in IMG/M
3300010359\|Ga0126376_10134583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1952	Open in IMG/M
3300010360\|Ga0126372_10420119	Not Available	1228	Open in IMG/M
3300010360\|Ga0126372_11878830	Not Available	643	Open in IMG/M
3300010361\|Ga0126378_10341929	Not Available	1605	Open in IMG/M
3300010361\|Ga0126378_11991941	Not Available	662	Open in IMG/M
3300010362\|Ga0126377_10925554	Not Available	935	Open in IMG/M
3300010366\|Ga0126379_11349827	Not Available	819	Open in IMG/M
3300010376\|Ga0126381_100071493	All Organisms → cellular organisms → Bacteria	4330	Open in IMG/M
3300010376\|Ga0126381_100569565	Not Available	1607	Open in IMG/M
3300010376\|Ga0126381_100940030	Not Available	1245	Open in IMG/M
3300010376\|Ga0126381_102738031	Not Available	704	Open in IMG/M
3300010376\|Ga0126381_102842514	Not Available	690	Open in IMG/M
3300010398\|Ga0126383_10121514	Not Available	2380	Open in IMG/M
3300010398\|Ga0126383_10550671	Not Available	1219	Open in IMG/M
3300012198\|Ga0137364_11141968	Not Available	585	Open in IMG/M
3300012208\|Ga0137376_10093673	All Organisms → cellular organisms → Bacteria → Proteobacteria	2537	Open in IMG/M
3300012208\|Ga0137376_11511980	Not Available	562	Open in IMG/M
3300012971\|Ga0126369_10999297	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300016270\|Ga0182036_10295802	Not Available	1229	Open in IMG/M
3300016270\|Ga0182036_10445904	Not Available	1017	Open in IMG/M
3300016294\|Ga0182041_10476204	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300016294\|Ga0182041_11310295	Not Available	663	Open in IMG/M
3300016294\|Ga0182041_12236495	Not Available	511	Open in IMG/M
3300016319\|Ga0182033_10055558	Not Available	2709	Open in IMG/M
3300016319\|Ga0182033_11502776	Not Available	608	Open in IMG/M
3300016319\|Ga0182033_11694154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300016319\|Ga0182033_11727104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300016319\|Ga0182033_11880834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300016341\|Ga0182035_10198644	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300016341\|Ga0182035_10564058	Not Available	980	Open in IMG/M
3300016341\|Ga0182035_10650981	Not Available	914	Open in IMG/M
3300016341\|Ga0182035_10677132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300016341\|Ga0182035_10950084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300016341\|Ga0182035_11370094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300016341\|Ga0182035_12135746	Not Available	508	Open in IMG/M
3300016357\|Ga0182032_10074220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2311	Open in IMG/M
3300016357\|Ga0182032_10276597	Not Available	1316	Open in IMG/M
3300016371\|Ga0182034_10000150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29578	Open in IMG/M
3300016371\|Ga0182034_10060152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2556	Open in IMG/M
3300016371\|Ga0182034_10259474	Not Available	1375	Open in IMG/M
3300016371\|Ga0182034_11154521	Not Available	673	Open in IMG/M
3300016387\|Ga0182040_10176698	Not Available	1548	Open in IMG/M
3300016387\|Ga0182040_10178365	Not Available	1542	Open in IMG/M
3300016404\|Ga0182037_10582382	Not Available	948	Open in IMG/M
3300016404\|Ga0182037_10919000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	760	Open in IMG/M
3300016422\|Ga0182039_10146534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1822	Open in IMG/M
3300017822\|Ga0187802_10110825	Not Available	1035	Open in IMG/M
3300017928\|Ga0187806_1161004	Not Available	745	Open in IMG/M
3300017933\|Ga0187801_10510526	Not Available	507	Open in IMG/M
3300017937\|Ga0187809_10076141	Not Available	1103	Open in IMG/M
3300017993\|Ga0187823_10039326	Not Available	1267	Open in IMG/M
3300017995\|Ga0187816_10537144	Not Available	527	Open in IMG/M
3300018431\|Ga0066655_11242704	Not Available	531	Open in IMG/M
3300020580\|Ga0210403_10099600	Not Available	2355	Open in IMG/M
3300021560\|Ga0126371_10321253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1678	Open in IMG/M
3300021560\|Ga0126371_11897729	Not Available	715	Open in IMG/M
3300025928\|Ga0207700_11610700	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300026872\|Ga0207785_1002880	All Organisms → cellular organisms → Bacteria → Proteobacteria	1793	Open in IMG/M
3300026895\|Ga0207758_1016880	Not Available	712	Open in IMG/M
3300026990\|Ga0207824_1020251	Not Available	709	Open in IMG/M
3300027070\|Ga0208365_1003528	Not Available	1832	Open in IMG/M
3300027527\|Ga0209684_1065795	Not Available	563	Open in IMG/M
3300027680\|Ga0207826_1006404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3188	Open in IMG/M
3300027910\|Ga0209583_10645592	Not Available	545	Open in IMG/M
3300030841\|Ga0075384_11298743	Not Available	531	Open in IMG/M
3300030848\|Ga0075388_11633902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300031057\|Ga0170834_103276599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1653	Open in IMG/M
3300031231\|Ga0170824_124739863	Not Available	643	Open in IMG/M
3300031446\|Ga0170820_17473460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea → Pandoraea thiooxydans	1345	Open in IMG/M
3300031474\|Ga0170818_103955344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea → Pandoraea thiooxydans	3096	Open in IMG/M
3300031543\|Ga0318516_10225081	Not Available	1084	Open in IMG/M
3300031545\|Ga0318541_10011479	Not Available	3997	Open in IMG/M
3300031546\|Ga0318538_10307457	Not Available	854	Open in IMG/M
3300031546\|Ga0318538_10473423	Not Available	679	Open in IMG/M
3300031573\|Ga0310915_10100334	Not Available	1955	Open in IMG/M
3300031573\|Ga0310915_10533330	Not Available	833	Open in IMG/M
3300031573\|Ga0310915_10777024	Not Available	674	Open in IMG/M
3300031668\|Ga0318542_10526355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	615	Open in IMG/M
3300031668\|Ga0318542_10682156	Not Available	537	Open in IMG/M
3300031680\|Ga0318574_10463979	Not Available	741	Open in IMG/M
3300031682\|Ga0318560_10319855	Not Available	837	Open in IMG/M
3300031682\|Ga0318560_10641927	Not Available	574	Open in IMG/M
3300031713\|Ga0318496_10130306	Not Available	1364	Open in IMG/M
3300031718\|Ga0307474_10801519	Not Available	745	Open in IMG/M
3300031719\|Ga0306917_10179498	Not Available	1591	Open in IMG/M
3300031719\|Ga0306917_10632836	Not Available	841	Open in IMG/M
3300031736\|Ga0318501_10544053	Not Available	635	Open in IMG/M
3300031744\|Ga0306918_10142011	Not Available	1764	Open in IMG/M
3300031744\|Ga0306918_10367704	Not Available	1117	Open in IMG/M
3300031744\|Ga0306918_10701996	Not Available	792	Open in IMG/M
3300031744\|Ga0306918_10835865	Not Available	718	Open in IMG/M
3300031744\|Ga0306918_11197541	Not Available	586	Open in IMG/M
3300031744\|Ga0306918_11261156	Not Available	569	Open in IMG/M
3300031751\|Ga0318494_10305650	Not Available	918	Open in IMG/M
3300031753\|Ga0307477_10047669	Not Available	2945	Open in IMG/M
3300031770\|Ga0318521_10344995	Not Available	882	Open in IMG/M
3300031782\|Ga0318552_10175580	Not Available	1081	Open in IMG/M
3300031792\|Ga0318529_10066548	Not Available	1582	Open in IMG/M
3300031823\|Ga0307478_11118049	Not Available	657	Open in IMG/M
3300031833\|Ga0310917_10603047	Not Available	746	Open in IMG/M
3300031833\|Ga0310917_10663237	Not Available	707	Open in IMG/M
3300031833\|Ga0310917_11002010	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031833\|Ga0310917_11125910	Not Available	523	Open in IMG/M
3300031845\|Ga0318511_10008826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3328	Open in IMG/M
3300031879\|Ga0306919_10145767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1722	Open in IMG/M
3300031879\|Ga0306919_10151992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1688	Open in IMG/M
3300031879\|Ga0306919_10345126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1136	Open in IMG/M
3300031879\|Ga0306919_10366167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1102	Open in IMG/M
3300031879\|Ga0306919_10691916	Not Available	785	Open in IMG/M
3300031879\|Ga0306919_11322516	Not Available	545	Open in IMG/M
3300031879\|Ga0306919_11443882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter tundripaludum → Methylobacter tundripaludum SV96	519	Open in IMG/M
3300031879\|Ga0306919_11521769	Not Available	503	Open in IMG/M
3300031890\|Ga0306925_10061092	All Organisms → cellular organisms → Bacteria	3950	Open in IMG/M
3300031890\|Ga0306925_10129667	Not Available	2704	Open in IMG/M
3300031890\|Ga0306925_10320438	Not Available	1666	Open in IMG/M
3300031890\|Ga0306925_10342934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1605	Open in IMG/M
3300031890\|Ga0306925_10346008	Not Available	1597	Open in IMG/M
3300031890\|Ga0306925_10856516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300031890\|Ga0306925_11034909	Not Available	834	Open in IMG/M
3300031893\|Ga0318536_10573666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300031896\|Ga0318551_10334008	Not Available	856	Open in IMG/M
3300031897\|Ga0318520_10914925	Not Available	553	Open in IMG/M
3300031910\|Ga0306923_10387451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	1591	Open in IMG/M
3300031910\|Ga0306923_10815092	Not Available	1030	Open in IMG/M
3300031912\|Ga0306921_10569454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1312	Open in IMG/M
3300031912\|Ga0306921_11136432	Not Available	873	Open in IMG/M
3300031912\|Ga0306921_12025067	Not Available	612	Open in IMG/M
3300031941\|Ga0310912_10871910	Not Available	693	Open in IMG/M
3300031941\|Ga0310912_11152113	Not Available	591	Open in IMG/M
3300031942\|Ga0310916_10311390	Not Available	1335	Open in IMG/M
3300031942\|Ga0310916_10715037	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300031942\|Ga0310916_11168270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	637	Open in IMG/M
3300031942\|Ga0310916_11204403	Not Available	626	Open in IMG/M
3300031942\|Ga0310916_11608527	Not Available	527	Open in IMG/M
3300031945\|Ga0310913_10796541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	666	Open in IMG/M
3300031946\|Ga0310910_11537659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300031954\|Ga0306926_10432009	Not Available	1623	Open in IMG/M
3300031962\|Ga0307479_10334572	Not Available	1497	Open in IMG/M
3300031981\|Ga0318531_10225235	Not Available	846	Open in IMG/M
3300032001\|Ga0306922_11268707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300032044\|Ga0318558_10237883	Not Available	894	Open in IMG/M
3300032059\|Ga0318533_10669682	Not Available	762	Open in IMG/M
3300032063\|Ga0318504_10167510	All Organisms → cellular organisms → Bacteria → Proteobacteria	1017	Open in IMG/M
3300032064\|Ga0318510_10392399	Not Available	590	Open in IMG/M
3300032076\|Ga0306924_10115868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3044	Open in IMG/M
3300032076\|Ga0306924_10348920	Not Available	1697	Open in IMG/M
3300032076\|Ga0306924_10373773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cir1	1633	Open in IMG/M
3300032076\|Ga0306924_11302332	Not Available	780	Open in IMG/M
3300032261\|Ga0306920_100482065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1841	Open in IMG/M
3300032261\|Ga0306920_100802132	Not Available	1382	Open in IMG/M
3300032261\|Ga0306920_101049305	Not Available	1184	Open in IMG/M
3300032261\|Ga0306920_101332250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300032261\|Ga0306920_101715650	Not Available	889	Open in IMG/M
3300032261\|Ga0306920_101835555	Not Available	854	Open in IMG/M
3300032261\|Ga0306920_102010193	Not Available	809	Open in IMG/M
3300032261\|Ga0306920_102960398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300032261\|Ga0306920_104070163	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300032261\|Ga0306920_104378386	Not Available	506	Open in IMG/M
3300033289\|Ga0310914_10532406	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300033289\|Ga0310914_10632523	Not Available	963	Open in IMG/M
3300033289\|Ga0310914_11661471	Not Available	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.02%
Aquatic	Environmental → Aquatic	3.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.02%
Freshwater	Environmental → Aquatic → Freshwater	2.99%
Sediment	Environmental → Aquatic → Sediment	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.10%
Loam	Environmental → Terrestrial → Soil → Loam	15.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.99%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.49%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100086444	3300000793	Forest Soil	MPMTLVLVMALNISVALGLGFVLGRIYQIRRYELERRVEPPPTAYIPPR*
JGIcombinedJ51221_100088062	3300003505	Forest Soil	MLVLVMVFNILVALALGFVFGRIYQIRRDELARRVEPPPVAYVPPTG*
Ga0066395_100130174	3300004633	Tropical Forest Soil	MTLVLVMALNISVALGLGFVLGRIYQIRRYELERRVEPPPTAYIPPR*
Ga0066684_109198761	3300005179	Soil	MTLVVVMAFNVLVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS*
Ga0066388_1000578753	3300005332	Tropical Forest Soil	MILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTR*
Ga0066388_1005087202	3300005332	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRPVYIPPS*
Ga0066388_1009073262	3300005332	Tropical Forest Soil	MPMTLVLVMAFNISVALALGFVLGRLYQIRSDELERRAELPRTAYIPPS*
Ga0066388_1011422141	3300005332	Tropical Forest Soil	MPMLVLVMVFNISVALALGFIIGRIYQIRRDELERRVELPPVANVPRP*
Ga0066388_1053389162	3300005332	Tropical Forest Soil	MPMTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRVEPPRTAYSPPS*
Ga0066388_1070237871	3300005332	Tropical Forest Soil	MPMTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPPS*
Ga0066388_1076266141	3300005332	Tropical Forest Soil	MTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRVEPPRTAYIPPS*
Ga0066388_1083465092	3300005332	Tropical Forest Soil	MTLVLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRTAYIPPS*
Ga0008090_155418362	3300005363	Tropical Rainforest Soil	RKMPMTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAHIPSS*
Ga0008090_158764424	3300005363	Tropical Rainforest Soil	MPMTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAELPRTAYIPPS*
Ga0008090_158923312	3300005363	Tropical Rainforest Soil	MILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP*
Ga0066670_101820022	3300005560	Soil	MLVLVMVFNISVALALGFIIGRIYQIRRDELERRVELPPVAHVPRP*
Ga0066903_1007180204	3300005764	Tropical Forest Soil	MTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRVEPPRTAYSPPS*
Ga0066903_1009490524	3300005764	Tropical Forest Soil	MLVLVMAFNILVALAFGFTIGQLYQIRRDELERRAEPPPVAPVPVPDLLQP*
Ga0066903_1016885942	3300005764	Tropical Forest Soil	MLVLVMAFNILVALALGFTIGRLYQIRRDELERRAEPSPTSRAPDLLQP*
Ga0066903_1021997331	3300005764	Tropical Forest Soil	VFNISVALVLGFTIGRIYQIRSDELERRAEPPPVAHVPRP*
Ga0066903_1025608723	3300005764	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDEMERRAELPRTAYIPPS*
Ga0066903_1026882541	3300005764	Tropical Forest Soil	VMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP*
Ga0066903_1030016314	3300005764	Tropical Forest Soil	SVALALGFVLGRLYQIRSDELERRAEPPRTAYIPPS*
Ga0066903_1033865082	3300005764	Tropical Forest Soil	MTLVAVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS*
Ga0066903_1040697161	3300005764	Tropical Forest Soil	MTLILVMAFNILVALGLGFVVGRLYQIRSDELERRAEPPRTAY
Ga0066903_1041818412	3300005764	Tropical Forest Soil	MTMVLVMAFNILVALGLGFLVGRIYQIRRDELERRAEPPLSVLAQHR*
Ga0066903_1042672212	3300005764	Tropical Forest Soil	MILVLVMAFNISVALALGFVIGRIYQMRSDELERRVKPPRTAYIPSA*
Ga0066903_1053289512	3300005764	Tropical Forest Soil	MPVTLVLVTAFNILVALALGFVVGRIYQIRSDELERRAEPPHTAYIPPS*
Ga0066903_1053584132	3300005764	Tropical Forest Soil	MTLVLVMAFNFFSALGLGFGVGRIYQIRRDELERRAEPPRTAYIPPS*
Ga0066903_1073469892	3300005764	Tropical Forest Soil	MILVLVMAFNTSVALALGFVLDRIYQIRSDLLERRAEPPVAGIPQP*
Ga0066652_1006736442	3300006046	Soil	MTLVVVMALNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS*
Ga0075019_109064661	3300006086	Watersheds	MLVLVMVFNILVALALGFVFGRIYQIRRDELARRVEPPPVAYV
Ga0070712_1015794461	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLVLVMVFNISVALVLGFTIGRIYQIRRNELARRVEPPPVAHVPRP*
Ga0079222_101744982	3300006755	Agricultural Soil	VTLVVVMAFNILVALGLGFVVGRIYQIRRDELERRADPPRPVYIPPS*
Ga0079220_120876731	3300006806	Agricultural Soil	VTLVVVMAFNILVALGLGFLVGRIYQIRRDELERRAEPPRP
Ga0126380_102789652	3300010043	Tropical Forest Soil	MPMTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRVEPPRTAYIPPS*
Ga0126373_100051818	3300010048	Tropical Forest Soil	MILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTG*
Ga0126373_117002922	3300010048	Tropical Forest Soil	MPMILVLVMAFNISVALALGFVIGRIYQIRSDELERRVKPPRTAYIPSP*
Ga0126370_116191831	3300010358	Tropical Forest Soil	MPMILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP*
Ga0126376_101345833	3300010359	Tropical Forest Soil	MAFNILVALGLGFLVGRIYQIRRDELERRVEPPRTAYIPPS*
Ga0126372_104201191	3300010360	Tropical Forest Soil	NTPMILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTG*
Ga0126372_118788301	3300010360	Tropical Forest Soil	ILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPSS*
Ga0126378_103419293	3300010361	Tropical Forest Soil	MPMILVLVMAFNTSVALALGFVLDRIYQIRSDLLERRAEPPVAGIPQP*
Ga0126378_119919411	3300010361	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVVDRIYQIRRDELERRAEPPRTAHIPSS*
Ga0126377_109255541	3300010362	Tropical Forest Soil	MPMTLVLVMAFNISVALGLGFVFGRIYQIRRYELERRVEPPHTAYIPPR*
Ga0126379_113498272	3300010366	Tropical Forest Soil	MAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS*
Ga0126381_1000714934	3300010376	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAELPRTTYIPPS*
Ga0126381_1005695651	3300010376	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAELPRTAYIPPS*
Ga0126381_1009400301	3300010376	Tropical Forest Soil	MTLVLAMAFNISVALALGFVLGRLYQIRSDELERRAELPRTAYIPPS*
Ga0126381_1027380312	3300010376	Tropical Forest Soil	MPMILVLVMAFNISVALALGFVIGRIYQMRSDELERRVKPPRTAYIPSP*
Ga0126381_1028425141	3300010376	Tropical Forest Soil	MPMTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS*
Ga0126383_101215144	3300010398	Tropical Forest Soil	MLVLVMVFNISVALVLGFTIGRIYQILRDELERRAELPPVAHVPRP*
Ga0126383_105506711	3300010398	Tropical Forest Soil	MPMTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRAEPPRTAYIPPS*
Ga0137364_111419682	3300012198	Vadose Zone Soil	MPMTLVLVMAFNISVALALGFVFGRIYQIRSDELGRRVEPPPVARIPQP*
Ga0137376_100936734	3300012208	Vadose Zone Soil	MTLVLVMAFNISVALALGFVFGRIYQIRSELGRRVEPPPVAHIPQP*
Ga0137376_115119801	3300012208	Vadose Zone Soil	MTLVLVMAFNISVALVLGFVFGRIYQIRSDELGRRVEPPPVARIPQP*
Ga0126369_109992973	3300012971	Tropical Forest Soil	FNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP*
Ga0182036_102958022	3300016270	Soil	PMILVLVMAFNTSVALALGFVLGRIYQIRFDLLERRAEPPVAGIPQR
Ga0182036_104459041	3300016270	Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPP
Ga0182041_104762042	3300016294	Soil	MLVLVMVFNISVALVLGFTIGRIYQIRRDQLERRVEPPPVA
Ga0182041_113102951	3300016294	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGI
Ga0182041_122364951	3300016294	Soil	MTLALLMALNISVALGLGFVLGRIYQIRRYELEQRVELPPTAYIPP
Ga0182033_100555584	3300016319	Soil	MTLVLVMAFNISVALGLGFVVGRIYQIRSDQLERRAEPPRSTYIPSS
Ga0182033_115027761	3300016319	Soil	SVALALGFVLGRIYQIRFDLLERRAEPPVAGIPQP
Ga0182033_116941541	3300016319	Soil	MTLILVMAFNIFCALGLGFGLGRIYQIRRDELERGAEPPRTAYIPPS
Ga0182033_117271041	3300016319	Soil	AGKEHAVTLVLLMVFVISVAMAVGFILGRIYQIRRDELDRRVGPPPVAYVPPSTS
Ga0182033_118808342	3300016319	Soil	MPMILVLVMAFNTSVALALGFVLGRIYQIRSDQLERRAEPPPVAGIPQP
Ga0182035_101986441	3300016341	Soil	KMPMTLVLVMALNISVALGLGFVLGRIYQIRRYELEQRVEPPPTAYIPPR
Ga0182035_105640581	3300016341	Soil	ILVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0182035_106509812	3300016341	Soil	VLVMAFNISVALALGFVIGRIYQIRSDELERCAEPPRTAYIPPS
Ga0182035_106771322	3300016341	Soil	VLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRAAYIPPS
Ga0182035_109500842	3300016341	Soil	VMAFNVLVALGLGFVVGRIYQIRRDELERRAEPPLTAHILPP
Ga0182035_113700941	3300016341	Soil	MTLALVMAFNILVALGLGFVVGRIYQIRSDELERRAEPPRTAYAPPR
Ga0182035_121357462	3300016341	Soil	MTLVLVMAFNVLVALGLGFVVGRIYQIRRDELERRAEP
Ga0182032_100742203	3300016357	Soil	MTLVLVMAFNVLVALGLGFVVGRIYQIRRDELERRADPPLTAHIPPP
Ga0182032_102765974	3300016357	Soil	PAVFNILVALALGFVLGRIYQIRRDELARRVEPPPVACVPRPTG
Ga0182032_105881851	3300016357	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAE
Ga0182034_1000015023	3300016371	Soil	MILVFLMVFEIAVAMAIGFVLVRIYQIRRDELGRRVEPPPVAYSRPTG
Ga0182034_100601521	3300016371	Soil	KEHAVTLVLLMVFVISVAMAVGFILGRIYQIRRDELDRHVGPPPVAYVPPSTS
Ga0182034_102594742	3300016371	Soil	MILVLVMAFNISVALALGFVIGRIYQMRSDELERRVKPPRTAYIPSP
Ga0182034_111545212	3300016371	Soil	MLVLVMVFNISVALALGFTLGRIYQIRSDDLERRAEPPPVARVPQP
Ga0182040_101766982	3300016387	Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRT
Ga0182040_101783651	3300016387	Soil	RKMPMTLVLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRTAYIPPS
Ga0182037_105823822	3300016404	Soil	MTLVLMMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0182037_109190002	3300016404	Soil	MTLALLMALNISVALGLGFVLGRIYQIRRYELEQRVEPPPTAYIPPR
Ga0182039_101465343	3300016422	Soil	MSMILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPV
Ga0187802_101108251	3300017822	Freshwater Sediment	MLVLVMVFNISVAFALGFVVGRIYQIRRDELERRVDPPPVAYSRPTG
Ga0187806_11610041	3300017928	Freshwater Sediment	MLVLVMVFNISVAFAFGFVVGRIYQIRRDELERRVDPPPVAYSRPTG
Ga0187801_105105261	3300017933	Freshwater Sediment	MPMLVLVMVFNILVALALGFVFGRIYQIRRDELARRVEPPPVAYVPPTG
Ga0187809_100761411	3300017937	Freshwater Sediment	MLVLVMVFNISVAFALGFVVGRIYQIRRDELERRVDPPPVA
Ga0187823_100393261	3300017993	Freshwater Sediment	MLVLVMVFNILVALALGFVFGRIYQIRRDELARRVEPPPVAYVPLTG
Ga0187816_105371441	3300017995	Freshwater Sediment	MLVLVMVFNILVALALGFVFGRIYQIRRDELARRVDPPPVAYVPPTG
Ga0066655_112427042	3300018431	Grasslands Soil	MTLVVVMAFNVLVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0210403_100996006	3300020580	Soil	MLVLVMVFNILVALALGFVFGRIYQIRRDELARRVEPPPVAYVPPTG
Ga0126371_103212533	3300021560	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAELPRTTYIPPS
Ga0126371_118977291	3300021560	Tropical Forest Soil	RKMPMILVLVMAFNTSVALALGFVLGRIYQIRSDQLERRAEPPPVARVPSP
Ga0207700_116107001	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LVMAFNISVALALGFVFGRIYQIRSDELGRRVEPPPVARIPHP
Ga0207785_10028801	3300026872	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPLT
Ga0207758_10168802	3300026895	Tropical Forest Soil	MTLILVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0207824_10202512	3300026990	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVVGRIYQIRRDKLERRAEPPLTAHIPPP
Ga0208365_10035281	3300027070	Forest Soil	MLVLVMVFNISVAFALGFVVGRIYQIRRDELARRVEPPPVAYVPPTG
Ga0209684_10657951	3300027527	Tropical Forest Soil	MTLVLVMALNISVALGLGFVLGRIYQIRRYELERRVEPPPTAYIPPR
Ga0207826_10064042	3300027680	Tropical Forest Soil	MTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0209583_106455922	3300027910	Watersheds	MLVLVMVFNILVALALGFVFGRIYQIRRDELARRVESPPVAYVPPTG
Ga0075384_112987431	3300030841	Soil	MTLVLVMAFNISVALALGFVFGRIYKIRSDELGRRVEPPPVVHIP
Ga0075388_116339021	3300030848	Soil	MPMTLVLVMAFNISVALALGFAFGRIYQIRSDELGRRVEPPPVARIPQP
Ga0170834_1032765991	3300031057	Forest Soil	MTLVLVMAFNISVALALGFVFGRIYQIRSDELGRRVEPPPV
Ga0170824_1247398631	3300031231	Forest Soil	MTLVLVMAFNISVALALGFVFGRIYQIRSDELGRRVEPPPVAHIPPP
Ga0170820_174734603	3300031446	Forest Soil	MPMTLVLVMAFNISVALALGFVFGRIYQIRSDELGRRVEPPPVARIPQP
Ga0170818_1039553442	3300031474	Forest Soil	MTLVLVMAFNISVALALGFVFGRIYQIRSDELGRRVEPPPVARIPQP
Ga0318516_102250812	3300031543	Soil	MPMILVLVMAFNTSVALALGFVLGRVYQIRSDLLERRAEPPVAGIPQP
Ga0318541_100114796	3300031545	Soil	MILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTG
Ga0318538_103074572	3300031546	Soil	MILVLVMAFNTSVALALGFVLGRVYQIRSDLLERRAEPPVAGIPQP
Ga0318538_104734232	3300031546	Soil	MTLVLVMAFNVLVALGLGFVVGRIYQIRRDELERRAEPPLTAHILPP
Ga0310915_101003342	3300031573	Soil	MTLVLVMAFNISVALALGFVLGRIYQIRSDQLERRAEPPRSTYIPSS
Ga0310915_105333301	3300031573	Soil	MTLVLVMAFNVLVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0310915_107770242	3300031573	Soil	MTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0318542_105263551	3300031668	Soil	TLVLVMALNISVALGLGFVLGRIYQIRRYELEQRVEPPPTAYIPPR
Ga0318542_106821561	3300031668	Soil	MTLVLVMAFNILVALKLGFVVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0318574_104639791	3300031680	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRFDLLERRAEPPVAGIPQR
Ga0318560_103198551	3300031682	Soil	KGKMPMTLVLVMAFNISVALALGFVLGRIYQIRSDQLERRAEPPRSTYIPSS
Ga0318560_106419272	3300031682	Soil	VLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPPS
Ga0318496_101303064	3300031713	Soil	MTLMLLMVVEIGVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTG
Ga0307474_108015192	3300031718	Hardwood Forest Soil	MPMLVLVMVFNILGALALGFVLGRIYQIRRDELARRVAPPPAAHVPRPTG
Ga0306917_101794982	3300031719	Soil	MPMTLVLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRTAYIPPS
Ga0306917_106328361	3300031719	Soil	MTLALVMAFNISVALALGFVVGRIYQMRSDELERRVKPPRTAYIPSP
Ga0318501_105440531	3300031736	Soil	MPMILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP
Ga0306918_101420114	3300031744	Soil	MPMTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPPF
Ga0306918_103677041	3300031744	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRFDLLERRAEPPVAGIPQP
Ga0306918_107019962	3300031744	Soil	MTLILVMAFNISVALALGFVLGRLYQIRSDELERRAEPPRTAYIPPS
Ga0306918_108358651	3300031744	Soil	LVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP
Ga0306918_111975411	3300031744	Soil	MTLVLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRTAYIP
Ga0306918_112611562	3300031744	Soil	FKRKMPMTLVLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRTAYIPPS
Ga0318494_103056501	3300031751	Soil	MSLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0307477_100476695	3300031753	Hardwood Forest Soil	MLVLVMVFNILGALALGFVLGRIYQIRRDELARRVAPPPVAHVPRPTG
Ga0318521_103449951	3300031770	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRSDLLGRRAEPPVAGIPQR
Ga0318552_101755803	3300031782	Soil	AEAFLGCTRNTPMILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTG
Ga0318529_100665482	3300031792	Soil	MILVFLMVFEIAAAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTG
Ga0307478_111180491	3300031823	Hardwood Forest Soil	MLVLVMVFNILGALALGFVLGRIYQIRRDELARRVAPPPVAHV
Ga0310917_106030471	3300031833	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQ
Ga0310917_106632372	3300031833	Soil	MTLVLVMVFNTLVALALGFLFGRIYQIRRDELERRVAPHQR
Ga0310917_110020102	3300031833	Soil	MAFNISVALALGFVIGRIYQIRSDELERRAEPPRTAYIPPS
Ga0310917_111259101	3300031833	Soil	MTLVLVMALNFFSALGLGFGVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0318511_100088268	3300031845	Soil	MPMTLVLVMALNISVALGLGFVLGRIYQIRRYELERRVEPPPTAYIPPR
Ga0306919_101457672	3300031879	Soil	VLVMAFNVLVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0306919_101519921	3300031879	Soil	MSMILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP
Ga0306919_103451263	3300031879	Soil	VAMAVGFILGRIYQIRRDELDRHVGPPPVAYVPPSTS
Ga0306919_103661672	3300031879	Soil	MPMTLVLVMALNISVALGLGFVLGRIYQIRRYELEQRVEPPPTAYIPPR
Ga0306919_106919161	3300031879	Soil	MAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIP
Ga0306919_113225161	3300031879	Soil	LVHWYKRKMPMTLVLVMAFNISVALALGFVIGRIYQIRSDELERCAEPPRTAYIPPS
Ga0306919_114438822	3300031879	Soil	FKRKMSMTLALVMAYNISVALALGFVIGRIYQIRSDELERRAEPPRAAYIPPS
Ga0306919_115217691	3300031879	Soil	MPMTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPP
Ga0306925_100610924	3300031890	Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPPF
Ga0306925_101296674	3300031890	Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPPS
Ga0306925_103204382	3300031890	Soil	MLVLVMVFNISVALALGFTLGRIYQIRSDDLERRAELPPVARVPQP
Ga0306925_103429342	3300031890	Soil	MPMTLALVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRAAYIPPS
Ga0306925_103460084	3300031890	Soil	MLVLVMVFNILIALALLGRIYQIRRDELARRVASPPGAHVPRPTG
Ga0306925_108565162	3300031890	Soil	LVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0306925_110349091	3300031890	Soil	ISVALALGFVIGRIYQIRSDELERCAEPPRTAYIPPS
Ga0318536_105736661	3300031893	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVA
Ga0318551_103340081	3300031896	Soil	MILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRP
Ga0318520_109149251	3300031897	Soil	MILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPV
Ga0306923_103874513	3300031910	Soil	MTLVLVMALNISVALGLGFVLGRIYQIRRYELEQRVELPPTAYIPPR
Ga0306923_108150922	3300031910	Soil	MLVLVMVFNISVALVLGFTIGRIYQIRRDQLERRVEPPPVARVLVP
Ga0306921_105694542	3300031912	Soil	MTLVLVMALNISVALGLGFVLGRIYQIRRYELEQRVEPPPTAYIPPR
Ga0306921_111364321	3300031912	Soil	MPRTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRA
Ga0306921_120250671	3300031912	Soil	LVLVMAFNILVALGLGFVVGRIYQIRRNELERRAEPPRTAYIPPS
Ga0310912_108719101	3300031941	Soil	MPMTLVLVMALNISVALGLGFVLGRIYQIRRYELEQRVELPPTAYIPPR
Ga0310912_111521132	3300031941	Soil	IGPQGMPMLVLVMVFNISVALALGFTLGRIYQIRADDLERRAEPPPVARVPGP
Ga0310916_103113902	3300031942	Soil	MPMTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0310916_107150371	3300031942	Soil	RKMPMTLALVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRAAYIPPS
Ga0310916_111682702	3300031942	Soil	GIGPQGMPMLVLVMVFNISVALALGFTLGRIYQIRADDLERRAEPPPVARVPGP
Ga0310916_112044032	3300031942	Soil	MPMLVLVMVFNILIALALLGRIYQIRRDELARRVASPPGALMD
Ga0310916_116085271	3300031942	Soil	MTLVLVMAFNILVALGLGFVVGQIYQIRRDELERGAEPPRTAYIPPS
Ga0310913_107965411	3300031945	Soil	MPMLVLVMVFNISVALALGFTLGRIYQIRADDLERRAEPPPVARVPGP
Ga0310910_115376591	3300031946	Soil	MTLALVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRAAYIPPS
Ga0306926_104320094	3300031954	Soil	ILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPPS
Ga0307479_103345721	3300031962	Hardwood Forest Soil	MPMLVLVMVFNILGALALGFVLGRIYQIRRDELARRVAPPPVAHVPRPTG
Ga0318531_102252351	3300031981	Soil	ALNFFSALGLGFGVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0306922_112687071	3300032001	Soil	WFKGKMPMTLVLVMAFNIFCALGLGFGLGRIYQIRRDELERGAEPPRTAYIPPS
Ga0318558_102378832	3300032044	Soil	ILVFLMVFEIAVAMAIGFVLGRIYQIRRDELGRRVEPPPVAYSRPTG
Ga0318533_106696821	3300032059	Soil	MTLVLVMAFNISVALALGFVIGRIYQIRSDELERCAEPPRTAYIPPS
Ga0318504_101675102	3300032063	Soil	MSMTLALVMAYNISVALALGFVIGRIYQIRSDELERRAEPPRAAYIPPS
Ga0318510_103923991	3300032064	Soil	MTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPRTAYI
Ga0306924_101158682	3300032076	Soil	MLVLVMVFNISVALALGFTLGRIYQIRADDLERRAEPPPVARVPGP
Ga0306924_103489201	3300032076	Soil	MPMTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAYIPPS
Ga0306924_103737732	3300032076	Soil	RKMPMTLVLVMAFNISVALALGFVIGRIYQIRSDELERCAEPPRTAYIPPS
Ga0306924_113023321	3300032076	Soil	MTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPRTAY
Ga0306920_1004820653	3300032261	Soil	MSMILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVA
Ga0306920_1008021321	3300032261	Soil	MTLVLVMAFNTSVALALGFVLGRIYQIRSDALERRGEPPSVPRIPQP
Ga0306920_1010493053	3300032261	Soil	MTLVLVMAFNISVALALGFVLGRIYQIRSDKLERRAEPPRTAYIPPS
Ga0306920_1013322503	3300032261	Soil	MPITLVLVMAFNISVALALGFVIGRIYQIRSDELERRAEPPRAAYIPPS
Ga0306920_1017156502	3300032261	Soil	MTLVQEEMPMTLVLVMAFNILVALGLGFVVGRIYQIRRDELERRAEPPLTAHIPPP
Ga0306920_1018355552	3300032261	Soil	MTLVLVMAFNILVALGLGFVVGRIYQIRSDELERRAEPSRTAYAPPR
Ga0306920_1020101932	3300032261	Soil	MSMTLVLVMAFTTFNAFGLGFVVGRIYQIHRDELERRAEPPRTAYINPA
Ga0306920_1029603981	3300032261	Soil	MAFNFFSALGLGFGVGRIYQIRRDELERRAEPPRTAYFPPS
Ga0306920_1040701631	3300032261	Soil	MTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRDGF
Ga0306920_1043783861	3300032261	Soil	MILVLVMAFNTSVALALGFVLGRIYQIRSDLLERRAEPPVAGIPQP
Ga0310914_105324061	3300033289	Soil	MALNFFSALGLGFGVGRIYQIRRDELERRAEPPRTAYIPPS
Ga0310914_106325233	3300033289	Soil	MPMMLVLVMAFNTSVALALGFVLGRIYQIRSDLLGRRAEPPVAGIPQP
Ga0310914_116614711	3300033289	Soil	MPMTLVLVMAFNILVALGLGFVLGRLYQIRSDELERRAEPPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F025541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences