Metagenome / Metatranscriptome Family F026495

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F026495
Family Type	Metagenome / Metatranscriptome
Number of Sequences	197
Average Sequence Length	46 residues
Representative Sequence	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHLVG
Number of Associated Samples	139
Number of Associated Scaffolds	197

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.16 %
% of genes near scaffold ends (potentially truncated)	96.45 %
% of genes from short scaffolds (< 2000 bps)	81.73 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.929 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.609 % of family members)
Environment Ontology (ENVO)	Unclassified (55.330 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (43.147 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.79% β-sheet: 0.00% Coil/Unstructured: 45.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 197 Family Scaffolds
PF00078	RVT_1	30.96
PF04392	ABC_sub_bind	16.24
PF02371	Transposase_20	1.02
PF13408	Zn_ribbon_recom	0.51
PF13545	HTH_Crp_2	0.51
PF13586	DDE_Tnp_1_2	0.51
PF13340	DUF4096	0.51
PF01315	Ald_Xan_dh_C	0.51
PF14022	DUF4238	0.51
PF02274	ADI	0.51
PF14534	DUF4440	0.51
PF14490	HHH_4	0.51
PF09527	ATPase_gene1	0.51
PF13185	GAF_2	0.51
PF12399	BCA_ABC_TP_C	0.51
PF11953	DUF3470	0.51
PF13495	Phage_int_SAM_4	0.51
PF01914	MarC	0.51

COG ID	Name	Functional Category	% Frequency in 197 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	16.24
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.02
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.51
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.51
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.51
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.51

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.93 %
Unclassified	root	N/A	38.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.93 %
Unclassified	root	N/A	38.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.93 %
Unclassified	root	N/A	38.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.07 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.64 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.05 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.51 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.07 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.51 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.51 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.07 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.51 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.51 %
Rhodospirillales bacterium 39-66-50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	0.51 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.52 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.51 %
Caballeronia cordobensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia cordobensis	0.51 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.51 %
Rhodospirillales bacterium 39-66-50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	0.51 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.51 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1007520	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1028779	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10019028	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10062101	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1006326	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300000677\|JGI12373J11866_102098	Not Available	514	Open in IMG/M
3300000696\|JGI12375J11883_102271	Not Available	500	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10013072	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10013818	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1010497	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300001141\|JGI12638J13249_100098	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300001143\|JGI12687J13287_100088	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300001153\|JGI12684J13248_100035	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300001155\|JGI12625J13251_10019	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300001163\|JGI12705J13279_100033	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300001204\|JGI12652J13314_100063	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300001867\|JGI12627J18819_10214341	Not Available	776	Open in IMG/M
3300002184\|JGI24770J26754_10279387	Not Available	553	Open in IMG/M
3300002910\|JGI25615J43890_1063220	Not Available	627	Open in IMG/M
3300002914\|JGI25617J43924_10145351	Not Available	819	Open in IMG/M
3300002917\|JGI25616J43925_10238397	Not Available	686	Open in IMG/M
3300003505\|JGIcombinedJ51221_10029898	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300004629\|Ga0008092_10015740	All Organisms → cellular organisms → Bacteria	2572	Open in IMG/M
3300005332\|Ga0066388_100728984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1594	Open in IMG/M
3300005332\|Ga0066388_101035440	Not Available	1380	Open in IMG/M
3300005332\|Ga0066388_104989376	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005332\|Ga0066388_108118950	Not Available	524	Open in IMG/M
3300005406\|Ga0070703_10451167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300005437\|Ga0070710_10099905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1726	Open in IMG/M
3300005713\|Ga0066905_100808858	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300005764\|Ga0066903_100524526	Not Available	2018	Open in IMG/M
3300005764\|Ga0066903_102029769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300005764\|Ga0066903_108720969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300005937\|Ga0081455_10108862	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300005937\|Ga0081455_10115835	All Organisms → cellular organisms → Bacteria → Proteobacteria	2121	Open in IMG/M
3300006050\|Ga0075028_101066304	Not Available	505	Open in IMG/M
3300006881\|Ga0068865_101983649	Not Available	528	Open in IMG/M
3300009090\|Ga0099827_11708738	Not Available	548	Open in IMG/M
3300009147\|Ga0114129_11618340	Not Available	792	Open in IMG/M
3300010046\|Ga0126384_10134371	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300010047\|Ga0126382_10580699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia cordobensis	918	Open in IMG/M
3300010047\|Ga0126382_11644273	Not Available	597	Open in IMG/M
3300010362\|Ga0126377_10131340	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300010398\|Ga0126383_10610347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1163	Open in IMG/M
3300012209\|Ga0137379_11446838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	589	Open in IMG/M
3300012350\|Ga0137372_10952386	Not Available	603	Open in IMG/M
3300012356\|Ga0137371_10066848	All Organisms → cellular organisms → Bacteria	2784	Open in IMG/M
3300012356\|Ga0137371_10917602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	666	Open in IMG/M
3300012359\|Ga0137385_10181649	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300012360\|Ga0137375_11050770	Not Available	636	Open in IMG/M
3300012361\|Ga0137360_10120060	All Organisms → cellular organisms → Bacteria → Proteobacteria	2043	Open in IMG/M
3300012363\|Ga0137390_11736257	Not Available	557	Open in IMG/M
3300012971\|Ga0126369_10743636	Not Available	1060	Open in IMG/M
3300012971\|Ga0126369_13183558	Not Available	537	Open in IMG/M
3300012989\|Ga0164305_10738569	Not Available	809	Open in IMG/M
3300013308\|Ga0157375_12260550	Not Available	648	Open in IMG/M
3300014157\|Ga0134078_10364379	Not Available	639	Open in IMG/M
3300016270\|Ga0182036_11107490	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300016294\|Ga0182041_11437578	Not Available	634	Open in IMG/M
3300016341\|Ga0182035_10033809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3330	Open in IMG/M
3300016371\|Ga0182034_12044902	Not Available	506	Open in IMG/M
3300016422\|Ga0182039_10872287	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300016445\|Ga0182038_10346525	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300016445\|Ga0182038_10755071	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300016445\|Ga0182038_11165283	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300016445\|Ga0182038_11502743	Not Available	605	Open in IMG/M
3300018032\|Ga0187788_10441870	Not Available	553	Open in IMG/M
3300018082\|Ga0184639_10544789	Not Available	577	Open in IMG/M
3300018412\|Ga0194136_1293366	Not Available	584	Open in IMG/M
3300020579\|Ga0210407_10118712	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300020580\|Ga0210403_10153798	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300021178\|Ga0210408_10119215	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300021418\|Ga0193695_1068438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300021476\|Ga0187846_10302301	Not Available	662	Open in IMG/M
3300021478\|Ga0210402_10168876	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300021559\|Ga0210409_10183389	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300022534\|Ga0224452_1040037	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M
3300022756\|Ga0222622_10681365	Not Available	746	Open in IMG/M
3300025320\|Ga0209171_10058013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2538	Open in IMG/M
3300025910\|Ga0207684_10951247	Not Available	720	Open in IMG/M
3300025916\|Ga0207663_11235724	Not Available	602	Open in IMG/M
3300027050\|Ga0209325_1019432	Not Available	792	Open in IMG/M
3300027371\|Ga0209418_1014741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1267	Open in IMG/M
3300027870\|Ga0209023_10379461	Not Available	876	Open in IMG/M
3300027874\|Ga0209465_10397976	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300028881\|Ga0307277_10476465	Not Available	560	Open in IMG/M
3300030862\|Ga0265753_1142346	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300030903\|Ga0308206_1095560	Not Available	659	Open in IMG/M
3300030989\|Ga0308196_1056769	Not Available	554	Open in IMG/M
3300031446\|Ga0170820_10915311	Not Available	609	Open in IMG/M
3300031543\|Ga0318516_10068659	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300031543\|Ga0318516_10489228	Not Available	706	Open in IMG/M
3300031544\|Ga0318534_10587055	Not Available	633	Open in IMG/M
3300031546\|Ga0318538_10077132	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300031561\|Ga0318528_10055070	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300031561\|Ga0318528_10593045	Not Available	594	Open in IMG/M
3300031564\|Ga0318573_10159851	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300031572\|Ga0318515_10095183	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300031572\|Ga0318515_10460903	Not Available	679	Open in IMG/M
3300031573\|Ga0310915_10116426	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300031573\|Ga0310915_10526305	Not Available	839	Open in IMG/M
3300031679\|Ga0318561_10058015	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300031680\|Ga0318574_10573392	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300031681\|Ga0318572_10326309	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300031681\|Ga0318572_10401947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	814	Open in IMG/M
3300031682\|Ga0318560_10084674	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300031713\|Ga0318496_10206952	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300031719\|Ga0306917_11359258	Not Available	548	Open in IMG/M
3300031724\|Ga0318500_10037292	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300031724\|Ga0318500_10181715	Not Available	1001	Open in IMG/M
3300031724\|Ga0318500_10425110	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031736\|Ga0318501_10046487	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300031736\|Ga0318501_10143792	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300031744\|Ga0306918_10052873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2706	Open in IMG/M
3300031744\|Ga0306918_10085519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2206	Open in IMG/M
3300031744\|Ga0306918_11138841	Not Available	603	Open in IMG/M
3300031744\|Ga0306918_11172837	Not Available	593	Open in IMG/M
3300031748\|Ga0318492_10548388	Not Available	615	Open in IMG/M
3300031763\|Ga0318537_10118173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300031770\|Ga0318521_10060153	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300031770\|Ga0318521_10448019	Not Available	772	Open in IMG/M
3300031771\|Ga0318546_10091082	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300031777\|Ga0318543_10033351	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300031778\|Ga0318498_10065800	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300031778\|Ga0318498_10388050	Not Available	621	Open in IMG/M
3300031779\|Ga0318566_10122635	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300031779\|Ga0318566_10298340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300031780\|Ga0318508_1011573	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300031794\|Ga0318503_10007882	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300031805\|Ga0318497_10503424	Not Available	678	Open in IMG/M
3300031805\|Ga0318497_10580666	Not Available	628	Open in IMG/M
3300031821\|Ga0318567_10309944	Not Available	890	Open in IMG/M
3300031832\|Ga0318499_10064650	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300031833\|Ga0310917_10270732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1145	Open in IMG/M
3300031833\|Ga0310917_10363624	Not Available	982	Open in IMG/M
3300031880\|Ga0318544_10347058	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300031890\|Ga0306925_11207414	Not Available	757	Open in IMG/M
3300031896\|Ga0318551_10371108	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031910\|Ga0306923_10151707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2645	Open in IMG/M
3300031910\|Ga0306923_10211153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2219	Open in IMG/M
3300031910\|Ga0306923_11472980	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300031910\|Ga0306923_11682855	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300031912\|Ga0306921_10139709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2829	Open in IMG/M
3300031912\|Ga0306921_10267419	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300031912\|Ga0306921_11732102	Not Available	674	Open in IMG/M
3300031912\|Ga0306921_12625716	Not Available	519	Open in IMG/M
3300031941\|Ga0310912_10097590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2159	Open in IMG/M
3300031941\|Ga0310912_10113766	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300031941\|Ga0310912_11161782	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300031942\|Ga0310916_10032279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3855	Open in IMG/M
3300031942\|Ga0310916_10135920	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300031942\|Ga0310916_10763917	Not Available	815	Open in IMG/M
3300031945\|Ga0310913_10034975	All Organisms → cellular organisms → Bacteria	3220	Open in IMG/M
3300031945\|Ga0310913_10936554	Not Available	608	Open in IMG/M
3300031946\|Ga0310910_10981716	Not Available	660	Open in IMG/M
3300031954\|Ga0306926_11669765	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031959\|Ga0318530_10287863	Not Available	678	Open in IMG/M
3300031962\|Ga0307479_10205136	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300031962\|Ga0307479_11334498	Not Available	677	Open in IMG/M
3300031981\|Ga0318531_10437966	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032001\|Ga0306922_10252816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1894	Open in IMG/M
3300032010\|Ga0318569_10105777	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300032025\|Ga0318507_10065687	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300032043\|Ga0318556_10347549	Not Available	776	Open in IMG/M
3300032044\|Ga0318558_10091491	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300032044\|Ga0318558_10096470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1379	Open in IMG/M
3300032044\|Ga0318558_10386976	Not Available	695	Open in IMG/M
3300032044\|Ga0318558_10700215	Not Available	506	Open in IMG/M
3300032051\|Ga0318532_10077804	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300032052\|Ga0318506_10285603	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300032054\|Ga0318570_10340621	Not Available	682	Open in IMG/M
3300032064\|Ga0318510_10297153	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300032065\|Ga0318513_10259452	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300032066\|Ga0318514_10760062	Not Available	515	Open in IMG/M
3300032068\|Ga0318553_10537490	Not Available	612	Open in IMG/M
3300032068\|Ga0318553_10644021	Not Available	554	Open in IMG/M
3300032076\|Ga0306924_10204427	All Organisms → cellular organisms → Bacteria	2267	Open in IMG/M
3300032076\|Ga0306924_12253160	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300032090\|Ga0318518_10047610	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300032090\|Ga0318518_10047650	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300032091\|Ga0318577_10042754	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300032091\|Ga0318577_10054202	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300032091\|Ga0318577_10476129	Not Available	595	Open in IMG/M
3300032180\|Ga0307471_100805252	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300032180\|Ga0307471_103476926	Not Available	557	Open in IMG/M
3300032205\|Ga0307472_100099301	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
3300032205\|Ga0307472_100127672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1812	Open in IMG/M
3300032261\|Ga0306920_100357558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2172	Open in IMG/M
3300032261\|Ga0306920_100576855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1665	Open in IMG/M
3300032261\|Ga0306920_100911789	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300032261\|Ga0306920_101976585	Not Available	817	Open in IMG/M
3300032261\|Ga0306920_102419370	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300032261\|Ga0306920_102803833	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300032261\|Ga0306920_104436223	Not Available	502	Open in IMG/M
3300033289\|Ga0310914_10055181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3292	Open in IMG/M
3300033290\|Ga0318519_10039839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.46%
Host-Associated	Host-Associated	2.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.40%
Aquatic	Environmental → Aquatic	4.06%
Plants	Host-Associated → Plants	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.89%
Sediment	Environmental → Aquatic → Sediment	2.03%
Freshwater	Environmental → Aquatic → Freshwater	1.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.02%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.51%
Cave	Environmental → Terrestrial → Cave	0.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.70%
Loam	Environmental → Terrestrial → Soil → Loam	12.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.02%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.51%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.51%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.51%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.02%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.51%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.51%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.51%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.03%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.02%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.02%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.02%
Watersheds	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Watersheds	0.51%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.51%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.51%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.51%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.51%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000677	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70	Environmental	Open in IMG/M
3300000696	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001141	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2	Environmental	Open in IMG/M
3300001143	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1	Environmental	Open in IMG/M
3300001153	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3	Environmental	Open in IMG/M
3300001155	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1	Environmental	Open in IMG/M
3300001163	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2	Environmental	Open in IMG/M
3300001204	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002184	Freshwater and sediment microbial communities from Lake Erie, Canada	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018412	Freshwater microbial communities from Pennsylvania, USA, analyzing microbe dynamics in response to fracking - TARM_MetaG_T3A_14	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10075201	3300000579	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAGEH
AF_2010_repII_A01DRAFT_10287792	3300000580	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGA
AF_2010_repII_A1DRAFT_100190282	3300000597	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAGEQR
AF_2010_repII_A1DRAFT_100621012	3300000597	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLP
AP72_2010_repI_A10DRAFT_10063261	3300000651	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAGE
JGI12373J11866_1020981	3300000677	Tropical Forest Soil	VFGIAAASRNTRFQAARYGLTRAGLSPADRASFGWRL
JGI12375J11883_1022712	3300000696	Tropical Forest Soil	MQQLVRFVFGIAAASRNTRFQAARYGLTRAGLXPADRASFGWRL
AF_2010_repII_A001DRAFT_100130721	3300000793	Forest Soil	VCGVAAASRNTRFQAARYGFTWAGLAPADRASFAW
AF_2010_repII_A001DRAFT_100138183	3300000793	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAG
AP72_2010_repI_A001DRAFT_10104972	3300000893	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAGEQRRR
JGI12638J13249_1000981	3300001141	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGG
JGI12687J13287_1000883	3300001143	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGASEQ
JGI12684J13248_1000351	3300001153	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLLGASK
JGI12625J13251_100191	3300001155	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHRVGARKQGRRHLNA
JGI12705J13279_1000331	3300001163	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAGEQRRRNFKAE
JGI12652J13314_1000632	3300001204	Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHRVGARKQGRRH
JGI12627J18819_102143411	3300001867	Forest Soil	VFGVAAASRNTRFQAARYSLTWAGLAPADRASFAWRLPSFDHLVGAG
JGI24770J26754_102793872	3300002184	Freshwater And Sediment	VFDVTVASRNTRFQAARYDLTWAGLAPADRASFAWRLLSFDHLV
JGI25615J43890_10632202	3300002910	Grasslands Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAGAFLYS
JGI25617J43924_101453511	3300002914	Grasslands Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASLAWRLPSLDHLVGEGDTVDGT
JGI25616J43925_102383971	3300002917	Grasslands Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASLAWRLPSFDH
JGIcombinedJ51221_100298981	3300003505	Forest Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHLVGAL
Ga0008092_100157403	3300004629	Tropical Rainforest Soil	VCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSLDHLVGELLEL*
Ga0066388_1007289841	3300005332	Tropical Forest Soil	SRNTRFQAARYGFTWAGLAPADRASFAWRLHSFDHLVGERE*
Ga0066388_1010354402	3300005332	Tropical Forest Soil	RFVFGIAAASRNTRFQAARYGLTWAGLAPADRASFGWRLLV*
Ga0066388_1049893762	3300005332	Tropical Forest Soil	AASRNTRFQAARYGFTWAGLAPADRASFAWRLHSLDHLVGKRE*
Ga0066388_1081189502	3300005332	Tropical Forest Soil	RFVCGVAAASRNTRFQAARYGLTWVGLTPTDRASFAWRLHSLNN*
Ga0070703_104511671	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAGEQRRRHCEAERHP*
Ga0070710_100999051	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RCVRFVFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPLFDHLVRALL*
Ga0066905_1008088582	3300005713	Tropical Forest Soil	ASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGAQQK*
Ga0066903_1005245263	3300005764	Tropical Forest Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLP
Ga0066903_1020297691	3300005764	Tropical Forest Soil	AASRNTRFQAARYGFTWAGLAPADRASFAWRLHSFDHLVGTGE*
Ga0066903_1087209691	3300005764	Tropical Forest Soil	RFVFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSFDHLVGAGEQWKG*
Ga0081455_101088621	3300005937	Tabebuia Heterophylla Rhizosphere	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVSNAGSVGGTVRPS
Ga0081455_101158354	3300005937	Tabebuia Heterophylla Rhizosphere	VFGVTAASRNTRFQAARYGLTWTGLAPADRASFAWRLPSFDHLVGAGEQ
Ga0075028_1010663041	3300006050	Watersheds	VFGIAAASRNTRFQAARYDLTWAGLAPADRASFCWR
Ga0068865_1019836493	3300006881	Miscanthus Rhizosphere	VFGVTATSRNTRIQAARYGLTWAGLTPADRASFAWRLLSFDHLVGAGEQRR
Ga0099827_117087381	3300009090	Vadose Zone Soil	VFGVTAASRNTRFQATSYGLTWAGLAPADRASFAWRLPSFDHLV
Ga0114129_116183402	3300009147	Populus Rhizosphere	VFGIAAASRNTRLQAARYGLTWAGLAPAERASLLGAFALFDHLVGTREQ
Ga0126384_101343712	3300010046	Tropical Forest Soil	VFGVAAASRNTRFQAARCGLTWAGLAPADRASFAWRLHSLDHLVGAGEQRRR
Ga0126382_105806991	3300010047	Tropical Forest Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVG
Ga0126382_116442732	3300010047	Tropical Forest Soil	VFGVTAASRNTRFQAARYSLTWAGLAAADRASFAWRLPSLNHLVGDSE*
Ga0126377_101313401	3300010362	Tropical Forest Soil	VFGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSLDDLVETMKR*
Ga0126383_106103473	3300010398	Tropical Forest Soil	VAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLIGAAE*
Ga0137379_114468382	3300012209	Vadose Zone Soil	CVRFVFGVTAASRNTRFQAVRYDLTWAGLAPADRASLAWRLSSSDHLR*
Ga0137372_109523862	3300012350	Vadose Zone Soil	VFGVAAASRNTRSQAVRYDLTCAGLAPADRASFAWRLPSLDHLVGAGEQRRRY
Ga0137371_100668486	3300012356	Vadose Zone Soil	FGVTAASRNTRFQAVRYDLTWAGLAPADRASLAWRLSSSDHLR*
Ga0137371_109176022	3300012356	Vadose Zone Soil	VTAASRNTRFQAVRYDLTWTGLAPADRASFAWRLPSFDHLVVAGPS*
Ga0137385_101816491	3300012359	Vadose Zone Soil	VFGVTAASRNTRFQAVRYDLTWTGLAPADRASFAWRLPSFDHLIGAAGGKYSRTFA
Ga0137375_110507702	3300012360	Vadose Zone Soil	VRFVFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGAGE*
Ga0137360_101200602	3300012361	Vadose Zone Soil	VFSVAAASRNTRFQAARYGLTWAGLAPADRVSFAWRLPSFNHLVGAGEDAN*
Ga0137390_117362571	3300012363	Vadose Zone Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAGAFPY
Ga0126369_107436362	3300012971	Tropical Forest Soil	VRFVFGIAAASRNTRFQAARYGFTWAGLAPADRASFGWRLLV*
Ga0126369_131835581	3300012971	Tropical Forest Soil	VFGVGAASRNTRFQTACYGLTWAGLAPADRASFVWRLPSLDH
Ga0164305_107385691	3300012989	Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRL
Ga0157375_122605503	3300013308	Miscanthus Rhizosphere	VFGVTATSRNTRIQAARYGLTRAGLTPADRASFAWRLLSFDHLVGAGEERRRY
Ga0134078_103643791	3300014157	Grasslands Soil	VFGIAAASRNTRFQAARYDLTWAGLAPADRASFAWRL
Ga0182036_111074901	3300016270	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFGWRLLTR
Ga0182041_114375781	3300016294	Soil	RFVCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHS
Ga0182035_100338094	3300016341	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFGWRLPTQ
Ga0182034_120449021	3300016371	Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAWRLP
Ga0182039_108722871	3300016422	Soil	GVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHFVGASK
Ga0182038_103465252	3300016445	Soil	VRFVFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRLLIR
Ga0182038_107550711	3300016445	Soil	CVRFVFGIAAASRNTRFQAARYGITLTGLATADRASFGWRLLIR
Ga0182038_111652831	3300016445	Soil	VFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRL
Ga0182038_115027432	3300016445	Soil	VFGVAAASRNTRFQAARYDLTWAGLAPADRASFGWR
Ga0187788_104418701	3300018032	Tropical Peatland	VFGIAAASRNTRFQAARYGLTWAGLTPADRASFGWRLPLFDHLVGAAEERERHR
Ga0184639_105447892	3300018082	Groundwater Sediment	VFGVTAASRNTRFQAARYDLTWAGLAPADRASFCWRLLSFDHLVGAQQE
Ga0194136_12933661	3300018412	Watersheds	VFGVTAASRNTRFQAARYGLTWAGLAPADRASLAWRLPSFDHLV
Ga0210407_101187123	3300020579	Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHLVGAQQIIAVD
Ga0210403_101537982	3300020580	Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHLV
Ga0210408_101192151	3300021178	Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHLVGAQQKLW
Ga0193695_10684382	3300021418	Soil	MFGVAAASRDTRFQAARYGLTWAGLAPADRASLAWRLPSFDHLIGQRQQLVRDFE
Ga0187846_103023011	3300021476	Biofilm	VFGIAAASRNTRFQAARYDLTWTGLAPADRASFGWRL
Ga0210402_101688761	3300021478	Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHLVGEQLDR
Ga0210409_101833892	3300021559	Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHLVG
Ga0224452_10400371	3300022534	Groundwater Sediment	TAASRNTRFQAARYGLTWAGLAPADRASLAWRLPSFDHLVGGREQGPRHGEAAVRWKLRL
Ga0222622_106813651	3300022756	Groundwater Sediment	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAGA
Ga0209171_100580133	3300025320	Iron-Sulfur Acid Spring	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFGWRLLSFDHLVGAA
Ga0207684_109512471	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSFDHLVGA
Ga0207663_112357241	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VFGVAAASRNTRFQAARYSLTWAGLAPADRASFAWRLPSFDH
Ga0209648_103336212	3300026551	Grasslands Soil	VLGVTAASRNPRLQAARYGLTWAGLAPADRASLAWRLPSFDHLVGAGEEGRRHVKIECFGGGTIDH
Ga0209325_10194322	3300027050	Forest Soil	VFGVAAASRNTRFQAARYSLTWAGLAPADRASFAWRLPSFDHLVGEREQPVWN
Ga0209418_10147414	3300027371	Forest Soil	VFGVAAASRNTRFQAARYSLTWAGLAPADRASFAWRLPSFDHLVG
Ga0209023_103794611	3300027870	Freshwater And Sediment	VFDVTVASRNTRFQAARYDLTWAGLAPADRASFAWRLLSFDHLVGAGEQRRR
Ga0209465_103979761	3300027874	Tropical Forest Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSFDHLVSAAEQ
Ga0307277_104764652	3300028881	Soil	VFGVAAASRNTRFQAARYGLTCAGLAPADRASFAWRLPSLDHLVGTGEQRR
Ga0265753_11423462	3300030862	Soil	RCVRFVFGVAAVSRNTRLQAARYDLTWAGLAPADRASFCWRLRLFDHLIGEYE
Ga0308206_10955601	3300030903	Soil	VFGVTAASRNTRFQAARYGLTWAELPPADRASFCWRLPLFDHPGGSGITV
Ga0308196_10567691	3300030989	Soil	VFGVAAASRNTRFQAARYGLTWTGLSPADRASLGWRLPSFN
Ga0170820_109153111	3300031446	Forest Soil	VFGIAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFNHLAGAGEEGRRHFEAKR
Ga0318516_100686591	3300031543	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDYL
Ga0318516_104892282	3300031543	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDYL
Ga0318534_105870551	3300031544	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGTS
Ga0318538_100771322	3300031546	Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGEREQP
Ga0318528_100550703	3300031561	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGDGEQ
Ga0318528_105930451	3300031561	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDYLVGD
Ga0318573_101598511	3300031564	Soil	VFGVAAASRNTRFQAARYGPTWVGLAPTDRASFAWRFPSLDHLVGAGKQAI
Ga0318515_100951831	3300031572	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGA
Ga0318515_104609031	3300031572	Soil	VFGIAAASRNTRFQAARYDLTWAGLAPADRASFGWRL
Ga0310915_101164262	3300031573	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFRWRLQLFDDLVG
Ga0310915_105263051	3300031573	Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSLDHLVGALLKTQRNVEGE
Ga0318561_100580152	3300031679	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDHLV
Ga0318574_105733922	3300031680	Soil	VFGIAAASRNTRFQAARYDLTLTGLAPADRASFGWRLL
Ga0318572_103263091	3300031681	Soil	VFGVAAASRNTRFQAARCGLTWAGLAPADRASFAWRLHSLDHLVGSSLQYQRHGK
Ga0318572_104019471	3300031681	Soil	VRFVFGVAAASRNTRFQAARYGLTWTGLSPADRASFAWRLPSLDHLVGAGEH
Ga0318560_100846741	3300031682	Soil	VFGVAAASRNTRFQAARYGPTWVGLAPTDRASFAWRFPSLDHLVGAGE
Ga0318496_102069521	3300031713	Soil	TRCVRFVFGVAAASRNTRFQAARYGPTWVGLAPTDRASFAWRLPSLDHLVGE
Ga0306917_113592582	3300031719	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVG
Ga0318500_100372921	3300031724	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLV
Ga0318500_101817153	3300031724	Soil	VRFVCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHS
Ga0318500_104251102	3300031724	Soil	NTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHFVGASK
Ga0318501_100464873	3300031736	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLIGDGEQ
Ga0318501_101437922	3300031736	Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGEDVE
Ga0306918_100528735	3300031744	Soil	VRFVFGIAAASRNTRFQAARYGLTRAGLAPADRASFGWRLPTQ
Ga0306918_100855193	3300031744	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGKRAQR
Ga0306918_111388411	3300031744	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFRWRLQLFDHLGGA
Ga0306918_111728371	3300031744	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRL
Ga0318492_105483882	3300031748	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDHLVGAHQ
Ga0318537_101181733	3300031763	Soil	VFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRLLTQLP
Ga0318521_100601533	3300031770	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGY
Ga0318521_104480191	3300031770	Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSLN
Ga0318546_100910823	3300031771	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDHLVG
Ga0318543_100333511	3300031777	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGKREQRRR
Ga0318498_100658001	3300031778	Soil	VFGVAAASRNTRFQAARYGPTWVGLAPTDRASFAWRFPSLDHRVGEREQLVW
Ga0318498_103880501	3300031778	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGAAE
Ga0318566_101226352	3300031779	Soil	VCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSLDHLVG
Ga0318566_102983401	3300031779	Soil	VRFVCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSFDHRVRKGE
Ga0318508_10115731	3300031780	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGEGQQG
Ga0318503_100078824	3300031794	Soil	VCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSLDHLVGE
Ga0318497_105034241	3300031805	Soil	VFGIAAASRNTRFQAARYGLTWAGLAPADRASFGWRL
Ga0318497_105806662	3300031805	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDQLVG
Ga0318567_103099441	3300031821	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVREGEQG
Ga0318499_100646502	3300031832	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGTGVDGRRHIE
Ga0310917_102707324	3300031833	Soil	GVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSLIFPL
Ga0310917_103636243	3300031833	Soil	VCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHS
Ga0318544_103470582	3300031880	Soil	GCVRFVCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRTEGE
Ga0306925_112074141	3300031890	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWR
Ga0318551_103711082	3300031896	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHFVGASK
Ga0306923_101517071	3300031910	Soil	RNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGAQQERFWDR
Ga0306923_102111531	3300031910	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGAGSY
Ga0306923_114729801	3300031910	Soil	VFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRLL
Ga0306923_116828551	3300031910	Soil	CVRFVFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRLLIQ
Ga0306921_101397093	3300031912	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGKREERRRH
Ga0306921_102674191	3300031912	Soil	VFGVAAASRNTRFQAARYGPTWVGLAPTDRASFAWRFPSLDHLVGAGEYWRRDFEAKR
Ga0306921_117321021	3300031912	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGK
Ga0306921_126257161	3300031912	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFRWRLQLFDLLCGAQ
Ga0310912_100975901	3300031941	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFRWRLQLFDHLVGAQHD
Ga0310912_101137661	3300031941	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVG
Ga0310912_111617822	3300031941	Soil	RNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHFVGASK
Ga0310916_100322791	3300031942	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFRWRLQLFDHLGGAQ
Ga0310916_101359203	3300031942	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGEREQRRW
Ga0310916_107639171	3300031942	Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSLDHLVGALLKTQRNVEG
Ga0310913_100349755	3300031945	Soil	RNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGPGPDQRSGHVRT
Ga0310913_109365541	3300031945	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDH
Ga0310910_109817161	3300031946	Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGGHQ
Ga0306926_116697651	3300031954	Soil	SCVRFVFGIAAASRNTRFQAARYGLTRAGLAPADRASFGWRLLTR
Ga0318530_102878631	3300031959	Soil	VFGIAAASRNTRFQAARYGFTWAGLAPADRASFGWRLLI
Ga0307479_102051361	3300031962	Hardwood Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLLG
Ga0307479_113344981	3300031962	Hardwood Forest Soil	CGVTAASRNTRFQAARYGLTWAGLSPADRASFAGAFL
Ga0318531_104379661	3300031981	Soil	AAASRNTRFQAARYGPTWVGLAPTDRASFAWRFPSLDHLVGEGEQLRRNFQA
Ga0306922_102528163	3300032001	Soil	RFVFGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSLIFPL
Ga0318569_101057772	3300032010	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLHSFDHHVGDGQ
Ga0318507_100656872	3300032025	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDDLVG
Ga0318556_103475492	3300032043	Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSLNH
Ga0318558_100914912	3300032044	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGEGDQQ
Ga0318558_100964702	3300032044	Soil	VFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRLLTQKN
Ga0318558_103869762	3300032044	Soil	VFGIAAASRNTRFQAARYGLTWAGLAPADRASFGWRLLIQIAL
Ga0318558_107002152	3300032044	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGKGEQ
Ga0318532_100778041	3300032051	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQS
Ga0318506_102856031	3300032052	Soil	VFGVAAASRNTRFQAARYGPTWVGLAPTDRASFAWRFPSLDHLVGEREQPVRNLE
Ga0318570_103406212	3300032054	Soil	VFGIAAASRNTRFQAARYGLTWAGLAPADRASFGWRLL
Ga0318510_102971532	3300032064	Soil	ASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHFVGASK
Ga0318513_102594521	3300032065	Soil	VFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRLLTR
Ga0318514_107600621	3300032066	Soil	VFGIAAASRNTRFQAARYGLTRAGLAPADRASFRWRLQLFDQLGALCLT
Ga0318553_105374902	3300032068	Soil	VFGVAAASRNTRFQAARYGLTWAGLAPADRASFAWRLLS
Ga0318553_106440212	3300032068	Soil	VFGIAAASRNTRFQAARYGLTLTGLAPADRASFGWRLLI
Ga0306924_102044271	3300032076	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLVGACEQR
Ga0306924_122531602	3300032076	Soil	GIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLGGKRAQRWRNREA
Ga0318518_100476103	3300032090	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDHLVGKREQRQRHGDA
Ga0318518_100476501	3300032090	Soil	VCGVAAASRNTRFQAARYGFTWAGLAPADRASFAWRLHSFDDLVGD
Ga0318577_100427543	3300032091	Soil	VFGIAAASRNTRFRAARYGLTQAGLAPADRASFGWRLQSFDYLVGAQPNRW
Ga0318577_100542021	3300032091	Soil	VFGVAAASRNTRFQAARYGPTWVGLAPTDRASFAWRFPSLDHLVGAEQN
Ga0318577_104761291	3300032091	Soil	VFGVTAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGEREQR
Ga0307471_1008052521	3300032180	Hardwood Forest Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLLSFDHL
Ga0307471_1034769261	3300032180	Hardwood Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVG
Ga0307472_1000993013	3300032205	Hardwood Forest Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSLDHLVGTDEQRRRNFQ
Ga0307472_1001276725	3300032205	Hardwood Forest Soil	VFGVAAASRNTRFQAARYSLTWAGLAPADRASFAWRLPSFDYLVGAQ
Ga0306920_1003575581	3300032261	Soil	FGIAAASRNTRFQAARYGLTRAGLAPADRASFGWRLLTR
Ga0306920_1005768552	3300032261	Soil	VRFVFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWRLPSFDHLVGAQQERFWDR
Ga0306920_1009117892	3300032261	Soil	RFVFGIAAASRNTRFQAARYGLTRAGLAPADRASFGWRLLTQ
Ga0306920_1019765851	3300032261	Soil	GCVRFVCGVAAASRNTRFQAARYGLTRVGLTPTDRASFAWRLPSLDHLVGAGR
Ga0306920_1024193701	3300032261	Soil	VFGVAAASRNTRFQAARYGLTWVGLAPTDRASFAWR
Ga0306920_1028038331	3300032261	Soil	IAAASRNTRFQAARYGLTLTGLAPADRASFGWRLLTQ
Ga0306920_1044362232	3300032261	Soil	VFGVTAASRNTRFQAARYGLTWAGLAPADRASFAWRLPSFDHVVG
Ga0310914_100551817	3300033289	Soil	FGVAATSRNTRFQAARYDLTWVGLAPADRASSAWRLHSFDYLVGAQQEGGR
Ga0318519_100398391	3300033290	Soil	VFGIAAASRNTRFRAARYGPTQAGLAPADRASFGWRLQSFDHLGGEQPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F026495

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences