NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F027123

Metagenome / Metatranscriptome Family F027123

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F027123
Family Type Metagenome / Metatranscriptome
Number of Sequences 195
Average Sequence Length 70 residues
Representative Sequence MATVKRYSIFCQKCNHKFPVFAMLPHTVDVNTWVKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA
Number of Associated Samples 101
Number of Associated Scaffolds 195

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.44 %
% of genes near scaffold ends (potentially truncated) 20.00 %
% of genes from short scaffolds (< 2000 bps) 77.44 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (84.615 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil
(18.974 % of family members)
Environment Ontology (ENVO) Unclassified
(35.385 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.077 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.90%    β-sheet: 14.43%    Coil/Unstructured: 55.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 195 Family Scaffolds
PF09360zf-CDGSH 38.46
PF02894GFO_IDH_MocA_C 15.38
PF00285Citrate_synt 8.72
PF03576Peptidase_S58 1.54
PF00462Glutaredoxin 1.03
PF08478POTRA_1 0.51
PF12327FtsZ_C 0.51
PF13754Big_3_4 0.51
PF00474SSF 0.51
PF01098FTSW_RODA_SPOVE 0.51
PF12728HTH_17 0.51
PF00005ABC_tran 0.51
PF04166PdxA 0.51

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 195 Family Scaffolds
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 15.38
COG0372Citrate synthaseEnergy production and conversion [C] 8.72
COG3191L-aminopeptidase/D-esteraseAmino acid transport and metabolism [E] 3.08
COG0772Peptodoglycan polymerase FtsW/RodA/SpoVECell cycle control, cell division, chromosome partitioning [D] 0.51
COG1589Cell division septal protein FtsQCell cycle control, cell division, chromosome partitioning [D] 0.51
COG19954-hydroxy-L-threonine phosphate dehydrogenase PdxACoenzyme transport and metabolism [H] 0.51
COG4775Outer membrane protein assembly factor BamACell wall/membrane/envelope biogenesis [M] 0.51


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.62 %
UnclassifiedrootN/A15.38 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_12970482Not Available563Open in IMG/M
3300000550|F24TB_17569011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300000559|F14TC_100328602All Organisms → cellular organisms → Bacteria2320Open in IMG/M
3300000787|JGI11643J11755_11622423All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300003203|JGI25406J46586_10242826All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300003321|soilH1_10154797All Organisms → cellular organisms → Bacteria3945Open in IMG/M
3300003324|soilH2_10165930All Organisms → cellular organisms → Bacteria2523Open in IMG/M
3300003684|Ga0005851_1075153Not Available627Open in IMG/M
3300004052|Ga0055490_10020285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1546Open in IMG/M
3300004281|Ga0066397_10029424All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium880Open in IMG/M
3300004479|Ga0062595_101016064All Organisms → cellular organisms → Bacteria → Acidobacteria714Open in IMG/M
3300004633|Ga0066395_10008869All Organisms → cellular organisms → Bacteria3646Open in IMG/M
3300004796|Ga0007763_11580009Not Available675Open in IMG/M
3300005093|Ga0062594_102964495All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300005332|Ga0066388_100012503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes6800Open in IMG/M
3300005332|Ga0066388_100391120All Organisms → cellular organisms → Bacteria2036Open in IMG/M
3300005332|Ga0066388_100526122All Organisms → cellular organisms → Bacteria1815Open in IMG/M
3300005332|Ga0066388_101366263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_91227Open in IMG/M
3300005332|Ga0066388_101503501Not Available1178Open in IMG/M
3300005332|Ga0066388_102643101All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005332|Ga0066388_103566791Not Available794Open in IMG/M
3300005332|Ga0066388_103802254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9770Open in IMG/M
3300005332|Ga0066388_103873848All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium763Open in IMG/M
3300005332|Ga0066388_104775556All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300005332|Ga0066388_104788895All Organisms → cellular organisms → Bacteria → Acidobacteria688Open in IMG/M
3300005332|Ga0066388_105590304All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300005332|Ga0066388_105802247Not Available624Open in IMG/M
3300005332|Ga0066388_106247935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300005332|Ga0066388_107395917All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300005332|Ga0066388_108506607All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300005353|Ga0070669_100441301All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300005529|Ga0070741_10012674All Organisms → cellular organisms → Bacteria15155Open in IMG/M
3300005565|Ga0068885_1009608All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300005565|Ga0068885_1729609All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300005565|Ga0068885_1906543All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300005617|Ga0068859_101883382All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium660Open in IMG/M
3300005713|Ga0066905_100050861All Organisms → cellular organisms → Bacteria2535Open in IMG/M
3300005713|Ga0066905_100080592All Organisms → cellular organisms → Bacteria2138Open in IMG/M
3300005713|Ga0066905_100140957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_91719Open in IMG/M
3300005713|Ga0066905_100271131All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300005713|Ga0066905_100309005All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300005713|Ga0066905_100451025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_91057Open in IMG/M
3300005713|Ga0066905_100526991All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9987Open in IMG/M
3300005713|Ga0066905_100599948All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300005713|Ga0066905_101180264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300005764|Ga0066903_100254732All Organisms → cellular organisms → Bacteria2714Open in IMG/M
3300005764|Ga0066903_100727426All Organisms → cellular organisms → Bacteria1756Open in IMG/M
3300005764|Ga0066903_105850858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium645Open in IMG/M
3300005764|Ga0066903_107201560All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300005764|Ga0066903_107424230All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300005764|Ga0066903_109111354All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300005937|Ga0081455_10007635All Organisms → cellular organisms → Bacteria → Proteobacteria11359Open in IMG/M
3300005937|Ga0081455_10008691All Organisms → cellular organisms → Bacteria10519Open in IMG/M
3300005937|Ga0081455_10398369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9956Open in IMG/M
3300005937|Ga0081455_10748868Not Available618Open in IMG/M
3300005937|Ga0081455_10786791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300005985|Ga0081539_10014695All Organisms → cellular organisms → Bacteria5759Open in IMG/M
3300006049|Ga0075417_10121742All Organisms → cellular organisms → Bacteria → Acidobacteria1198Open in IMG/M
3300006844|Ga0075428_100486601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_91320Open in IMG/M
3300006844|Ga0075428_100981659All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300006844|Ga0075428_101176892Not Available808Open in IMG/M
3300006845|Ga0075421_100269226All Organisms → cellular organisms → Bacteria2082Open in IMG/M
3300006845|Ga0075421_100275969All Organisms → cellular organisms → Bacteria2052Open in IMG/M
3300006845|Ga0075421_100298540All Organisms → cellular organisms → Bacteria1959Open in IMG/M
3300006845|Ga0075421_100340193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1815Open in IMG/M
3300006845|Ga0075421_100376253All Organisms → cellular organisms → Bacteria1710Open in IMG/M
3300006845|Ga0075421_101079377All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300006845|Ga0075421_102639816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300006847|Ga0075431_100254756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1782Open in IMG/M
3300006847|Ga0075431_100374579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1428Open in IMG/M
3300006847|Ga0075431_100477039All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300006852|Ga0075433_10308796Not Available1400Open in IMG/M
3300006871|Ga0075434_100038665All Organisms → cellular organisms → Bacteria4726Open in IMG/M
3300006904|Ga0075424_101548821All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300006914|Ga0075436_100516274All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300006954|Ga0079219_10187514Not Available1155Open in IMG/M
3300006969|Ga0075419_10531259All Organisms → cellular organisms → Bacteria → Acidobacteria820Open in IMG/M
3300006969|Ga0075419_11435065All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300007212|Ga0103958_1109749All Organisms → cellular organisms → Bacteria3168Open in IMG/M
3300007534|Ga0102690_1690062All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300008510|Ga0110928_1037009Not Available524Open in IMG/M
3300009112|Ga0115923_10313985Not Available1834Open in IMG/M
3300009112|Ga0115923_10347595All Organisms → cellular organisms → Bacteria3554Open in IMG/M
3300009112|Ga0115923_10501110All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300009147|Ga0114129_11115195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9987Open in IMG/M
3300009162|Ga0075423_10353698All Organisms → cellular organisms → Bacteria → Acidobacteria1540Open in IMG/M
3300009239|Ga0103858_10189508Not Available539Open in IMG/M
3300009257|Ga0103869_10070514All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300009281|Ga0103744_10036609All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300009295|Ga0103747_10229688All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300009553|Ga0105249_12198700All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300009609|Ga0105347_1128428All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300009870|Ga0131092_11011634Not Available671Open in IMG/M
3300009873|Ga0131077_10002006All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia51901Open in IMG/M
3300009873|Ga0131077_10008258All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia21739Open in IMG/M
3300010043|Ga0126380_10390803All Organisms → cellular organisms → Bacteria → Acidobacteria1029Open in IMG/M
3300010043|Ga0126380_10502675All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300010046|Ga0126384_10017425All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes4585Open in IMG/M
3300010046|Ga0126384_10092734All Organisms → cellular organisms → Bacteria → Acidobacteria2207Open in IMG/M
3300010046|Ga0126384_10906340All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium797Open in IMG/M
3300010046|Ga0126384_10984349All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300010046|Ga0126384_12152970All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300010047|Ga0126382_10213663All Organisms → cellular organisms → Bacteria1383Open in IMG/M
3300010047|Ga0126382_10228059All Organisms → cellular organisms → Bacteria1347Open in IMG/M
3300010047|Ga0126382_10529888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9954Open in IMG/M
3300010047|Ga0126382_11089504All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300010047|Ga0126382_11182363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300010047|Ga0126382_11379845All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300010047|Ga0126382_12079345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9543Open in IMG/M
3300010166|Ga0126306_11128466All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300010359|Ga0126376_11058082Not Available816Open in IMG/M
3300010359|Ga0126376_12870895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300010360|Ga0126372_10443109Not Available1201Open in IMG/M
3300010362|Ga0126377_10008045All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes8046Open in IMG/M
3300010362|Ga0126377_10021689All Organisms → cellular organisms → Bacteria → Acidobacteria5297Open in IMG/M
3300010362|Ga0126377_10070336All Organisms → cellular organisms → Bacteria3111Open in IMG/M
3300010362|Ga0126377_10125994All Organisms → cellular organisms → Bacteria → Acidobacteria2373Open in IMG/M
3300010362|Ga0126377_10618135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_91129Open in IMG/M
3300010362|Ga0126377_10696132All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_91068Open in IMG/M
3300010362|Ga0126377_11502593Not Available747Open in IMG/M
3300010362|Ga0126377_11735051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9699Open in IMG/M
3300010362|Ga0126377_11846496All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300010362|Ga0126377_11876175Not Available675Open in IMG/M
3300010362|Ga0126377_12513964All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300010362|Ga0126377_12563226All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300010362|Ga0126377_13583587Not Available502Open in IMG/M
3300012021|Ga0120192_10041807All Organisms → cellular organisms → Bacteria → Acidobacteria794Open in IMG/M
3300012081|Ga0154003_1003532All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes4537Open in IMG/M
3300012081|Ga0154003_1007775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2587Open in IMG/M
3300012081|Ga0154003_1065979Not Available619Open in IMG/M
3300012948|Ga0126375_11525806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300012956|Ga0154020_11136811All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300012971|Ga0126369_10012192All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes6669Open in IMG/M
3300013121|Ga0172278_1306All Organisms → cellular organisms → Bacteria102974Open in IMG/M
(restricted) 3300013126|Ga0172367_10638036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300017788|Ga0169931_10552911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9795Open in IMG/M
3300017788|Ga0169931_10552912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9795Open in IMG/M
3300018469|Ga0190270_10003009All Organisms → cellular organisms → Bacteria → Acidobacteria8332Open in IMG/M
3300019360|Ga0187894_10016675All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes5499Open in IMG/M
3300019360|Ga0187894_10029849All Organisms → cellular organisms → Bacteria → Acidobacteria3548Open in IMG/M
3300019360|Ga0187894_10032236All Organisms → cellular organisms → Bacteria → Acidobacteria3355Open in IMG/M
3300019360|Ga0187894_10104498All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300019362|Ga0173479_10804809All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300019487|Ga0187893_10076158All Organisms → cellular organisms → Bacteria → Acidobacteria3130Open in IMG/M
3300019487|Ga0187893_10118997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2250Open in IMG/M
3300019487|Ga0187893_10879588All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300020048|Ga0207193_1804681Not Available589Open in IMG/M
3300020215|Ga0196963_10393720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300023211|Ga0255842_1271686All Organisms → cellular organisms → Bacteria → Acidobacteria1347Open in IMG/M
3300024502|Ga0255181_1031443All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium978Open in IMG/M
3300024545|Ga0256347_1014298All Organisms → cellular organisms → Bacteria → Acidobacteria1936Open in IMG/M
3300024545|Ga0256347_1061180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium837Open in IMG/M
3300024545|Ga0256347_1083742Not Available682Open in IMG/M
3300024858|Ga0255286_1054710All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300024858|Ga0255286_1092630Not Available597Open in IMG/M
3300025923|Ga0207681_10044286All Organisms → cellular organisms → Bacteria → Acidobacteria2982Open in IMG/M
3300025937|Ga0207669_11792904Not Available524Open in IMG/M
3300025971|Ga0210102_1062081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M
3300026075|Ga0207708_10469117Not Available1051Open in IMG/M
3300026118|Ga0207675_102177986All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300026422|Ga0255308_1034640All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300026562|Ga0255285_1009514All Organisms → cellular organisms → Bacteria → Acidobacteria1909Open in IMG/M
3300027646|Ga0209466_1011098All Organisms → cellular organisms → Bacteria1904Open in IMG/M
3300027646|Ga0209466_1014744All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300027646|Ga0209466_1133806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300027793|Ga0209972_10002486All Organisms → cellular organisms → Bacteria → Acidobacteria15046Open in IMG/M
3300027806|Ga0209985_10479795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300027870|Ga0209023_10823882All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300027874|Ga0209465_10006533All Organisms → cellular organisms → Bacteria → Acidobacteria5114Open in IMG/M
3300027907|Ga0207428_10006177All Organisms → cellular organisms → Bacteria → Acidobacteria11067Open in IMG/M
3300027909|Ga0209382_10226322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2133Open in IMG/M
3300027909|Ga0209382_10271823All Organisms → cellular organisms → Bacteria1918Open in IMG/M
3300027909|Ga0209382_10359870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1628Open in IMG/M
3300027909|Ga0209382_10420111All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300027909|Ga0209382_11490920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium674Open in IMG/M
(restricted) 3300028043|Ga0233417_10146306Not Available1018Open in IMG/M
3300028647|Ga0272412_1045805Not Available1854Open in IMG/M
3300028647|Ga0272412_1106509Not Available1192Open in IMG/M
3300028647|Ga0272412_1356267All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300028648|Ga0268299_1000087All Organisms → cellular organisms → Bacteria366167Open in IMG/M
3300031456|Ga0307513_10455494All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1003Open in IMG/M
3300031576|Ga0247727_10064484All Organisms → cellular organisms → Bacteria → Acidobacteria4238Open in IMG/M
3300031576|Ga0247727_10077529All Organisms → cellular organisms → Bacteria3687Open in IMG/M
3300031576|Ga0247727_10225737All Organisms → cellular organisms → Bacteria1676Open in IMG/M
3300032002|Ga0307416_103234759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300032013|Ga0310906_11085256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_9578Open in IMG/M
3300032261|Ga0306920_101869166All Organisms → cellular organisms → Bacteria → Acidobacteria845Open in IMG/M
3300034019|Ga0334998_0150413Not Available1492Open in IMG/M
3300034659|Ga0314780_020359All Organisms → cellular organisms → Bacteria → Acidobacteria1125Open in IMG/M
3300034661|Ga0314782_140974All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300034662|Ga0314783_142857All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300034664|Ga0314786_084954All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300034665|Ga0314787_016752All Organisms → cellular organisms → Bacteria → Acidobacteria1011Open in IMG/M
3300034666|Ga0314788_176307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300034670|Ga0314795_070558Not Available655Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil18.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil16.41%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere14.36%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater4.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.10%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake3.59%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks3.59%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere3.59%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge3.59%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.05%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.54%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.54%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens1.54%
Swimming Pool Sandfilter BackwashEngineered → Built Environment → Unclassified → Unclassified → Unclassified → Swimming Pool Sandfilter Backwash1.54%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water1.03%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.03%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.03%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater1.03%
Wastewater SludgeEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wastewater Sludge1.03%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.51%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.51%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.51%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.51%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment0.51%
Water BodiesEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies0.51%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.51%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.51%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.51%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.51%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.51%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.51%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.51%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.51%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.51%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.51%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.51%
Active SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge0.51%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003684Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA - 2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004796Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005565Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007212Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projectsEnvironmentalOpen in IMG/M
3300007534Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300008510Microbial Communities in Water bodies, Singapore - Site RAEnvironmentalOpen in IMG/M
3300009112Microbial communities from sand-filter backwash in Singapore swimming pools - KB-2EngineeredOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009239Microbial communities of water from Amazon river, Brazil - RCM11EnvironmentalOpen in IMG/M
3300009257Microbial communities of water from Amazon river, Brazil - RCM22EnvironmentalOpen in IMG/M
3300009281Microbial communities of wastewater sludge from Singapore - Sludge_b1_OctoberEnvironmentalOpen in IMG/M
3300009295Microbial communities of wastewater sludge from Singapore - Sludge5_b2_FebruaryEnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009870Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plantEngineeredOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300012021Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1EnvironmentalOpen in IMG/M
3300012081Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaGHost-AssociatedOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012956Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MGEngineeredOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013121Activated sludge microbial communities from Jimei wastewater treatment plant (WWTP), Xiamen City, Fujian province, ChinaEngineeredOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020215Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5EnvironmentalOpen in IMG/M
3300023211Activated sludge enriched bacterial communities from WWTP in Fort Collins, Colorado, USA ? CAEngineeredOpen in IMG/M
3300024502Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8dEnvironmentalOpen in IMG/M
3300024545Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024858Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026422Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026562Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027806Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027870Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028647Metatranscriptome of activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP Weurt (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300028648Activated sludge microbial communities from bioreactor in Nijmegen, Gelderland, Netherland - NOB reactorEngineeredOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300034019Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049EnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034662Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034670Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1297048213300000550SoilMATVKRYQILCAKCHHHFPVFAALSHSVSLDEWTKEKSENHDCKAYADALAKARAPRP
F24TB_1756901123300000550SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
F14TC_10032860223300000559SoilMATVKRYTIFCQKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
JGI11643J11755_1162242323300000787SoilMATVKRYSVFCQKCNQKFPIFAMVPHTVNVDNWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA*
JGI25406J46586_1024282623300003203Tabebuia Heterophylla RhizosphereMATVKRYSIFCAKCNHKFPVFAALHHSINVDSWIKEKSENHDCKAFADQLAKERAPRP
soilH1_1015479733300003321Sugarcane Root And Bulk SoilTVKRYNIFCPKCQHKFPVFASLHHTIDVDGWIKEKSDNHDCKAYADQLAKERAPRALNPIKQSKKGK*
soilH2_1016593033300003324Sugarcane Root And Bulk SoilMATVKRYNIFCPKCQHKFPVFASLHHTIDVDGWIKEKSDNHDCKAYADQLAKERAPRALNPIKQSKKGK*
Ga0005851_107515313300003684Freshwater And SedimentMATVKKYTVFCQKCHQKYPIFASLHHSISVDGWLKDKAENHDCKAYADQVAKERSPRPVNPLKASKKGA*
Ga0055490_1002028513300004052Natural And Restored WetlandsMATVKRYSIYCQKCHHKFPVFAMLPHTVDVDGWVKEKADNHDCKAYADQLAKERAPRPVNPIKASKKA*
Ga0066397_1002942423300004281Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0062595_10101606433300004479SoilMATVKRYQILCAKCHHHFPIFAALSHTVSLDEWLKEKSENHDCKAYADALAKARLPKAVNPIKASKKGK*
Ga0066395_1000886933300004633Tropical Forest SoilMATVKRYTIFCSKCNHKFPVFAMLPHTVNVNTWVKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0007763_1158000923300004796Freshwater LakeMATVKRYNVYCPKCNQKFPIFASLHHSIDVDGWLKDKSDNHDCKAYADQLAKERSPRPINPLKASKKGA*
Ga0062594_10296449513300005093SoilMATVKRYSIFCAKCNQKFPVFAMVPHNVDVNVWTKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA*
Ga0066388_10001250343300005332Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNVWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKSV*
Ga0066388_10039112023300005332Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0066388_10052612223300005332Tropical Forest SoilMATVKRYSIICLKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0066388_10136626323300005332Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVEVNVWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA*
Ga0066388_10150350123300005332Tropical Forest SoilMATVKRYSIFCPKCNHKFSVFAMLPHTVDMTTWMKDKADNHDCKAYADQLAKERAPRPINPIKLSKKGA*
Ga0066388_10264310123300005332Tropical Forest SoilMATVKRYSVFCQKCNQKFPVFAALHHSIDADQWLKDKATNHDCKAFAEQLAKERSPRPINPIKASKKS*
Ga0066388_10356679123300005332Tropical Forest SoilMATVKRYTIFCQKCNHKFPVFAMLPHTVEVNTWMKEKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0066388_10380225423300005332Tropical Forest SoilMATVKRYTIFCSKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0066388_10387384813300005332Tropical Forest SoilMATVKRYSIFCPKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0066388_10477555613300005332Tropical Forest SoilMATVKRYSIFCPKCNHKFPVFAMVPHTVNVDTWMKDKSDNHDCKAYADQIAKERAPRPINPLKASKKGA*
Ga0066388_10478889513300005332Tropical Forest SoilMATVKRYSVFCPKCNHKFPVFAMLPHTVDMNIWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0066388_10559030423300005332Tropical Forest SoilMATVKRYSIFCAKCNQKFPVFAMLPHTVNVNVWTKDKADNHDCKAYSDQLAKERAPRPVNPLKASKKGA*
Ga0066388_10580224723300005332Tropical Forest SoilMATVKRYSIFCSKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0066388_10624793523300005332Tropical Forest SoilMATVKRYSIFCAKCNQKFPVFAMLPHTVEVNAWMKDKADNHDCKAYADQLAKERAPRPVNPIKASKKNA*
Ga0066388_10739591713300005332Tropical Forest SoilYSIFCSKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0066388_10850660713300005332Tropical Forest SoilMATVKRYSIYCQKCNHKFPIFAVLPHTLVIDTWLKEKAENHDCKAFADQLARERAPRPINPLKA
Ga0070669_10044130113300005353Switchgrass RhizosphereMATVKRYNIFCPKCQHKFPIFASLHHTIDVDGWVKEKSDTHDCKVYADQLAKERAPRNLNPIKASKKGK*
Ga0070741_1001267443300005529Surface SoilMASVKRYNIFCQKCQHNFPVFASVYHTIDVDKWVKEKADSHDCKSYADALAKARAPRPINPIKLSKKKA*
Ga0068885_100960813300005565Freshwater LakeRHGLRRRKGMATVKRYNIFCPKCNQRFPVFASLHHSIDVDSWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA*
Ga0068885_172960913300005565Freshwater LakeMGRGDEKGMATVKRYNIFCPKCNQRFPVFASLHHSIDVDSWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA*
Ga0068885_190654323300005565Freshwater LakeMATVKRYNIFCPKCNQRFPVFASLHHSIDVDTWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA*
Ga0068859_10188338213300005617Switchgrass RhizosphereMATVKRYLIHCPKCNHDFPVFASLFHSIDVNAWMQDKSANHDCKAYADQLAKERAPRALNPIKASKKGK*
Ga0066905_10005086133300005713Tropical Forest SoilMATVKRYSIYCPKCHLKFPLFAVLPHTIVIDAWIKEKADNHDCKAFADQLAKERAPRPINPLKASKKGA*
Ga0066905_10008059223300005713Tropical Forest SoilMATVKRYSIYCQKCNHKFPIFAVLPHTIVIDAWLKDKAENHDCKAFADQLARERAPRPINPLKASKKGA*
Ga0066905_10014095723300005713Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNTWVKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0066905_10027113123300005713Tropical Forest SoilMATVKRYSVFCPKCNHKFPVFAMLPHTVDVNAWMKEKADNHDCKAYSDQLAKERAPRPINPLKASKKGA*
Ga0066905_10030900523300005713Tropical Forest SoilMATVKRYSVFCSKCNHKFPVFAMLPHTVDVNQWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0066905_10045102523300005713Tropical Forest SoilMATVKRYSIFCPKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPINPL
Ga0066905_10052699123300005713Tropical Forest SoilMATVKRYSIFCPKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0066905_10059994823300005713Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNTWMKEKADNHDCKTYADQLAKERAPRPINPIKASKKG*
Ga0066905_10118026423300005713Tropical Forest SoilMATVKRYSIFCPKCNHKFPVFAMLPHTVDVNTWMKDKGDNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0066903_10025473233300005764Tropical Forest SoilMATVKRYSVFCPKCNHKFPVFAMLPHNVDVNIWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0066903_10072742623300005764Tropical Forest SoilMATVKRYSIFCQKCNHKFSVFAMLPHTVEVNAWMKEKGDNHDCKAYADQLAKERAPRPINPIKQSKKGA*
Ga0066903_10585085823300005764Tropical Forest SoilMATVKRYSIFCSKCNHKFPVFAMLPHTVNVNTWVKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0066903_10720156013300005764Tropical Forest SoilMKCNHKFPIFAMLPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0066903_10742423023300005764Tropical Forest SoilMATVKRYTVFCPKCNHKFPIFASLHHSIDVDQWVKEKSDTHDCKAYADQLAKERAPRPVNPLKASKKSA*
Ga0066903_10911135413300005764Tropical Forest SoilMATVKRYSIFCQKCNQKFPVFAMLPHTVDVNVWTKDKADNHDCKAYADQLAKERAPRPVNPLKASKKSA*
Ga0081455_1000763593300005937Tabebuia Heterophylla RhizosphereMATVKRYSIFCQKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0081455_1000869153300005937Tabebuia Heterophylla RhizosphereMATVKRYSIYCQKCNHKFPIFAVLPHTIVIDAWLKEKAENHDCKAFADQLARERAPRPINPLKASKKGA*
Ga0081455_1039836923300005937Tabebuia Heterophylla RhizosphereMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNTWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0081455_1074886813300005937Tabebuia Heterophylla RhizosphereMATVKRYSVFCQKCNQKFPVFAALHHSIDADQWLKDKATNHDCKAFAEQLAKERAPRPINPIKASKKS*
Ga0081455_1078679113300005937Tabebuia Heterophylla RhizosphereMATVKRYSIFCSKCNQKFPVFAMLPHTVDVNVWTKDKSDNHDCKAYADQLAKERAPRPVNPLKASKKGA*
Ga0081539_1001469573300005985Tabebuia Heterophylla RhizosphereMATVKRYSIFCAKCNHKFPVFAALHHSINVDSWIKEKSENHDCKAFADQLAKERAPRPINPLKASKKNA*
Ga0075417_1012174233300006049Populus RhizosphereIGSYSIMATVKRYSVYCQKCNEKFPVFAMLPHTVDVNKWMKDKSDNHDCKAYADQLAKERTPRPINPLKASKKGA*
Ga0075428_10048660123300006844Populus RhizosphereMATVKRYSVYCQKCNEKFPVFAMLPHTVDVNKWMKDKSDNHDCKAYADQLAKERTPRPINPLKASKKGA*
Ga0075428_10098165923300006844Populus RhizosphereMATVKRYSVFCQKCNQKFSVFAMLPHTVEVNKWMKDKSDNHDCKAYADQLAKERTPRPINPLKASKKGA*
Ga0075428_10117689223300006844Populus RhizosphereMATVKRYSIFCQKCNHKFPVFAMVPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0075421_10026922623300006845Populus RhizosphereMATVKRYTIFCQKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0075421_10027596933300006845Populus RhizosphereMATVKRYSVFCQKCNQKFPVFAMLPHTVDVNKWMKDKSDNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0075421_10029854023300006845Populus RhizosphereMATVKRYSVFCQKCNQKFPIFAMVPHTVNVDNWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0075421_10034019323300006845Populus RhizosphereMATVKRYSIFCQKCNHKFPVFAMVPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0075421_10037625333300006845Populus RhizosphereMATVKRYSVFCPKCNHKFPVFAMLPHTVDVNAWMKEKADNHDCKTYSDQLAKERAPRPINPLKASKKGA*
Ga0075421_10107937723300006845Populus RhizosphereMATVKRYSVFCQKCNQKFPVFAMLPHTVEVNKWMKDKSDNHDCKAYADQLAKERTPRPINPLKASKKGA*
Ga0075421_10263981623300006845Populus RhizosphereMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNSWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA*
Ga0075431_10025475633300006847Populus RhizosphereMATVKRYSVFCQKCNQKFPVFAMLPHTVEVNKWMKDKSDNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0075431_10037457913300006847Populus RhizosphereMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNSWMKDKADNHDCKAYADQLAKERAPRPVNPL
Ga0075431_10047703923300006847Populus RhizosphereMATVKRYSIVCQKCNHKFPVFAMVPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0075433_1030879623300006852Populus RhizosphereMATVKRYLIHCPKCNHDFPVFASLFHSIDFNAWMQDKATNHDCKAYADQLAKERAPRALNPIKASKKGK*
Ga0075434_10003866553300006871Populus RhizosphereMATVKRYTIFCQKCNHKFPVFAMVPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0075424_10154882123300006904Populus RhizosphereMATVKRYSIFCVKCNQKFPVFAMVPHNVDVNVWTKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA*
Ga0075436_10051627413300006914Populus RhizosphereMATVKRYTIFCQKCNHKFPVFAMVPHTVDVNTWVKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0079219_1018751433300006954Agricultural SoilMATVKRYNIYCPKCQHKFPIFASLHHAIDVDGWIKEKSDNHDCKAYADQLAKERAPRNLNPIKQSKKGK*
Ga0075419_1053125933300006969Populus RhizosphereIMATVKRYSIFCQKCNHKFPVFAMVPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0075419_1143506513300006969Populus RhizosphereKGSSYSIMATVKRYSIFCAKCNHKFPVFAMLPHTVEVNTWMKDKSDNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0103958_110974943300007212Freshwater LakeMATVKRYNIFCPKCNQRFPVFASLHHSIDVDSWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA*
Ga0102690_169006213300007534Freshwater LakeMGRGDEKGMATVKRYNIFCPKCNQRFPVFASLHHSIDVDTWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA*
Ga0110928_103700923300008510Water BodiesATVKKYSVFCPKCNQKFPIFASLHHSIDVDGWLKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA*
Ga0115923_1031398523300009112Swimming Pool Sandfilter BackwashMATVKRYNIYCSKCNHKFPVFASLHHSINVDGWVKDKAENHDCKAYADQLAKERAPRALNPIKASKKGK*
Ga0115923_1034759553300009112Swimming Pool Sandfilter BackwashMATVKRYLIHCLKCNHDFPVFASLFHTINVDAWMKDKSDNHDCKAYADQLAKERAPRALNPIKASKKGK*
Ga0115923_1050111023300009112Swimming Pool Sandfilter BackwashMATVKKYVIHCAKCEQDFPVFASLYHNINPDTWMKDKAENHDCKAYADQLAKERAPKALNPIKASKKGK*
Ga0114129_1111519523300009147Populus RhizosphereMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNSWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0075423_1035369833300009162Populus RhizosphereSIFCQKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0103858_1018950823300009239River WaterVNPIFTGVFTIMATVKRFLIYCQKCSQQFPVFAALPHTLDVDTWVKEKAESHDCKAYADQLAKERAPRPVNPLKQSKKSAK*
Ga0103869_1007051423300009257River WaterMATVKRYNILCQKCHQTFPIFASLHHSIDVDGWIKEKSENHDCKAYADQLAKERAPRPVNPLKQSKKSAK*
Ga0103744_1003660923300009281Wastewater SludgeMATVKRYLIHCPKCNHEFPVFASLFHSIDVSAWMKDKSDNHDCKAYADQLAKERAPRALNPIKASKKGK*
Ga0103747_1022968813300009295Wastewater SludgeMASVKRYSIFCQKCNQKFPVFAMVPHTVDVDAWIKDKADNHDCKAYADQLAKERAPRPINPLKASKKGK*
Ga0105249_1219870023300009553Switchgrass RhizosphereMATVKRYNIFCPKCQLKFPIFASLHQTIDVDGWVKEKSDTHDCKVYADQLAKERAPRNLNPIKA
Ga0105347_112842813300009609SoilMATVKRYQVHCPKCNHNFPVFAALYYTVDVDKWLQEKSDTHDCKAYADLLAKAREPRALNPIKASKKGK*
Ga0131092_1101163413300009870Activated SludgeKCNQKFPVFAMVPHTVDVDAWIKDKADNHDCKAYADQLAKERAPRPINPLKASKKGK*
Ga0131077_10002006253300009873WastewaterMATVKRYSILCPKCNHKFPIFAALHNTINVDDWIKEKADNHDCKAYADQLAKERAPRPINPLKASKKGK*
Ga0131077_10008258123300009873WastewaterMATVKRYSIFCPKCSHKFPVFAALHHTIDIDDWMREKADNHDCKAYAEQMAKERAPRPVNPLKASKKGK*
Ga0126380_1039080323300010043Tropical Forest SoilMATVKRYSIYCPKCHHKFPIFAVLPHTIVIDAWIKEKAENHDCKTFADQLAKERAPRPINPLKASKKGA*
Ga0126380_1050267523300010043Tropical Forest SoilMATVKRYSIICQKCNHKFPVFAMLPHTVDVNVWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKSA*
Ga0126384_1001742553300010046Tropical Forest SoilLDNLRRISSEEFLIMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNTWMKEKADNHDCKTYADQLAKERAPRPINPIKASKKG*
Ga0126384_1009273433300010046Tropical Forest SoilMATVKRYSIFCQKCNQKFPVFAMLPHTVDVNVWMKEKSDNHDCKAYADQLAKERAPRPINPLKASKKSV*
Ga0126384_1090634013300010046Tropical Forest SoilKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQMAKERVPRPINPLKASKKGA*
Ga0126384_1098434933300010046Tropical Forest SoilFCQKCNHKFPVFAMLPHTVEVNTWMKEKADNHDCKAYADQLAKERAPRPINPLKASKKGA
Ga0126384_1215297013300010046Tropical Forest SoilLIPFKLDATKRELPIFLHKKGSSYSIMATVKRYSIFCPKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA*
Ga0126382_1021366333300010047Tropical Forest SoilRYSIFCQKCNHKFPVFAMLPHTVDVNLWMKDKGDNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0126382_1022805913300010047Tropical Forest SoilEEFLIMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNTWMKEKADNHDCKTYADQLAKERAPRPINPIKASKKG*
Ga0126382_1052988813300010047Tropical Forest SoilLIQFKLDAAKRELSIFLHKKGSSYSIMATVKRYSIFCSKCNHKFPVFAMVPHTVDVNTWMKDKADNHDCKAYSDQLAKERAPRPINPLKASKKGA*
Ga0126382_1108950423300010047Tropical Forest SoilMATVKRYSIYCQKCNHKFPIFAVLPHTLVIDTWLKEKAENHDCKAFADQLARERAPRPINPLKASKKGA*
Ga0126382_1118236313300010047Tropical Forest SoilLIPFKLDATKRELPIFLHKKGSSYSIMATVKRYSIFCPKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKSA*
Ga0126382_1137984523300010047Tropical Forest SoilRLRSFSIMATVKRYSVFCQKCHHKFPVFAMLPHTVDVNAWMKEKADNHDCKAYADQLAKERAPRPVNPLKASKKSA*
Ga0126382_1207934513300010047Tropical Forest SoilMATVKRYSVFCQKCNQKFPVFAALHHSIDADQWLKDKAINHDCKAFAEQLAKERAPRPINPIKASKKS
Ga0126306_1112846613300010166Serpentine SoilMATVKRYQINCSKCHHNFPVFAALYHTVDVDVWMKEKSDTHDCKAYADALSKSREPRPINPIKASKKGK*
Ga0126376_1105808223300010359Tropical Forest SoilLSNLGRISSEEFLIMATVKRYSIFCQKCSHKFPVFAMLPHTIDVNTWMKDKADNHDCKAYADQLAKERAPRPINPIKASKKG*
Ga0126376_1287089513300010359Tropical Forest SoilMATVKRYSIFCAKCNQKFPVFAMVPHTVDVNVWSKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0126372_1044310913300010360Tropical Forest SoilMATVKRYTIFCQKCNHKFPVFAMLPHTVEVNTWMKEKADNHDCKAYADQLAKERAPRPINPLKASKKSA*
Ga0126377_1000804593300010362Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNVWIKEKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0126377_1002168983300010362Tropical Forest SoilMATVKRYSIFCQKCNHKFSVFAMLPHTVDMGVWMKEKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0126377_1007033653300010362Tropical Forest SoilMATVKRYSIYCQKCHHKFPIFAVLPHTIVIDAWIKEKAENHDCKTFADQLAKERAPRPINPLKASKKGA*
Ga0126377_1012599433300010362Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVNVNVWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKSA*
Ga0126377_1061813523300010362Tropical Forest SoilMATVKRYSVFCQKCNQKFPVFAALHHSIDANQWLKDKATNHDCKAFAEQLAKERAPRLVNPIKASKKS*
Ga0126377_1069613223300010362Tropical Forest SoilMATVKRYSVFCPKCNHKFPVFAMLPHTVDVNAWMKEKADNHDCKTYSDQLAKERAPRPVNPLKASKKGA*
Ga0126377_1150259333300010362Tropical Forest SoilMATVKRYSIFCQKCNQKFPVFAMLPHTVDVNVWMKDKADNHDCKAYADQLSKERAPRPINPLKASKKSV*
Ga0126377_1173505113300010362Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVDVNTWMKEKSDNHDCKAYADQLAKERAPR
Ga0126377_1184649623300010362Tropical Forest SoilMATVKRYSIFCAKCNQKFPVFAMLPHTVDVNVWTKDKADNHDCKVYADQLAKERAPRPVNPIKASKKGA*
Ga0126377_1187617513300010362Tropical Forest SoilHRELFDMATVKRYTIFCPKCNHKFPVFAMLPHTVDVNTWTKDKGDNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0126377_1251396413300010362Tropical Forest SoilMATVKRYSIFCSKCNQKFPVFAMLPHTVDVGVWTKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA*
Ga0126377_1256322623300010362Tropical Forest SoilMATVKRYSVFCQKCNQKFPVFAALHHSIDADQWLKDKATNHDCKAFAEQLAKERAPRLLNPIKASKKS*
Ga0126377_1358358713300010362Tropical Forest SoilIKIGSYSIMATVKRYSIFCPKCNHKFPVFAMLPHTVDVNTWMKEKADNHDCKTYADQLAKERAPRPINPIKASKKG*
Ga0120192_1004180713300012021TerrestrialINIGSYLIMATVKRYSVFCPKCNHKFPVFAMLPHTVDVNAWMKEKADNHDCKAYSDQLVKERAPRPINPLKASKKGA*
Ga0154003_100353233300012081Attine Ant Fungus GardensMATVKRYSVFCQKCNQKFPIFAMVPHTVDVNKWMKDKSDNHDCKAYADQLAKERTPRPINPLKASKKGA*
Ga0154003_100777533300012081Attine Ant Fungus GardensMATVKRYSIFCSKCNQKFPVFAMVPHTVEVNAWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0154003_106597913300012081Attine Ant Fungus GardensMATVKRYSIFCQKCNQKFPIFAMLPHTVEVNKWMKDKSDNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0126375_1152580613300012948Tropical Forest SoilMATVKRYSIFCPKCNHKFPVFAMVPHTVNVDTWLKDKSDNHDCKAYADQLAKERAPRPINPLKASKKGA*
Ga0154020_1113681113300012956Active SludgeQISIQEYSIMATVKRFNIFCTKCQHKFPIFASLHHTIDVDGWVKEKSDNHDCKAYADQLAKERAPRNLNPIKASKKGK*
Ga0126369_1001219233300012971Tropical Forest SoilLIPFKLDATKRDLSILLHKKGGSYSIMATVKRYTIFCSKCNHKFPVFAMLPHTVNVNTWVKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA*
Ga0172278_130643300013121Activated SludgeMATVKRYNIHCPKCQHNFPIFASLHHSIDIDGWIKDKAENHDCKAYADQLAKERAPRALNPIKASKKGK*
(restricted) Ga0172367_1063803623300013126FreshwaterMATVKRYNIFCPKCNQRFPVFASLHHSIDVDTWIREKSDTHDCKAYADQLAKERSPRPVNPLKASKKGA*
Ga0169931_1055291113300017788FreshwaterMATVKRYNIFCPKCNQRFPVFASLHHSIDVDSWIREKSDTHDCKAYADQLAKERSPRPVNPLKASKKGA
Ga0169931_1055291213300017788FreshwaterMATVKRYNIFCPKCNQRFPVFASLHHSIDVDTWIREKSDTHDCKAYADQLAKERSPRPVNPLKASKKGA
Ga0190270_1000300963300018469SoilMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNNWMKDKADNHDCKVYADQLAKERAPRPINPIKASKKGA
Ga0187894_1001667553300019360Microbial Mat On RocksMATVKRYSIFCQKCNHKFSVFAMLPHTVDMNAWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKSA
Ga0187894_1002984943300019360Microbial Mat On RocksMATVKRYSIFCQKCNHKFSVFAMLPHTVHINEWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGT
Ga0187894_1003223633300019360Microbial Mat On RocksMATVKRYSIYCQKCHHKFSVFAMLPHTVDVEGWMKEKADNHDCKAYADQLAKERAPRPVNPIKASKKA
Ga0187894_1010449833300019360Microbial Mat On RocksMATVKRYSIFCQKCNHKFPVFAMLPHTVEVNAWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKSA
Ga0173479_1080480913300019362SoilMATVKRYQILCQKCQHNFPVFAALYHNVDVDGWIKEKAENHDCKAYADQLAKAREPRNLNPIKASKKGK
Ga0187893_1007615843300019487Microbial Mat On RocksMATVKRYSIFCQKCNHRFSVFAMLPHTVDMNTWMKEKADNHDCKAYADQLAKERAPRPINPLKASKKGA
Ga0187893_1011899733300019487Microbial Mat On RocksMATVKRYSIYCQKCHHKFPVFAMLPHTVDVDGWVKEKADNHDCKAYADQLAKERAPRPVNPIKASKKG
Ga0187893_1087958823300019487Microbial Mat On RocksMATVKRYNIHCQKCNENFPIFASIYHSINVDAWIKEKADTHDCKAYADALAKARAPRPINPLKASKKSA
Ga0207193_180468123300020048Freshwater Lake SedimentMATVKKYTVFCQKCHQKYPIFASLHHSISVDGWLKDKAENHDCKAYADQVAKERSPRPVNPLKASKKGA
Ga0196963_1039372013300020215SoilMATVKRYLIHCSKCNHDFPVFASLFHTIDFDAWAKDKATNHDCKAYADQLAKERALRPINPLKASKKGK
Ga0255842_127168633300023211Activated SludgeMATVKRYNIFCPKCQHKFPVFASIHHTIDIDGWVKEKSDTHDCKAYADQLAKERAPRALNPIKASKKGK
Ga0255181_103144323300024502FreshwaterMATVKRYNVYCPKCNQKFPIFASLHHSIDVDGWLKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0256347_101429823300024545FreshwaterMATVKKYSVFCPKCNQKFPIFASLHHSIDVDGWLKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0256347_106118023300024545FreshwaterMATVKRYNIFCPKCNQRFPVFASLHHSIDVDGWVREKSETHDCKAYADQLAKERSPRPINPLKASKKGA
Ga0256347_108374223300024545FreshwaterMATVKRYNILCPKCHHKFPIFASLHHSIDVDGWLKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0255286_105471033300024858FreshwaterFCPKCNQRFPVFASLHHSIDVDGWVREKSETHDCKAYADQLAKERSPRPINPLKASKKGA
Ga0255286_109263013300024858FreshwaterRGESPRIIHHRIGSLAIMATVKRYNILCPKCHHKFPIFASLHHSIDVDGWLTNKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0207681_1004428643300025923Switchgrass RhizosphereMATVKRYQILCGKCHHHFPVFAALSHSVSLDEWTKEKAENHDCKAYADALAKARMPKAVNPIKASKKGK
Ga0207669_1179290423300025937Miscanthus RhizosphereMATVKRYQINCSKCHHNFPVFAALYHTIDVEGWMKEKADTHDCKAYADALAKSREPRPINPIKASKKGK
Ga0210102_106208113300025971Natural And Restored WetlandsMATVKRYSIYCQKCHHKFPVFAMLPHTVDVDGWVKEKADNHDCKAYADQLAKERAPRPVNPIKASKKA
Ga0207708_1046911733300026075Corn, Switchgrass And Miscanthus RhizosphereYSVFCQKCNQKFPIFAMVPHTVNVNDWMKNKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0207675_10217798623300026118Switchgrass RhizosphereMATVKRYSIFCVKCNQKFPVFAMVPHNVDVNVWTKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0255308_103464013300026422FreshwaterMATVKRYNIFCPKCNQRFPVFASLHHSIDVDSWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA
Ga0255285_100951423300026562FreshwaterMATVKRYNVYCPKCNQKFPIFASLHHSIDVDGWLKDKSDNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0209466_101109833300027646Tropical Forest SoilMATVKRYSIFCPKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA
Ga0209466_101474423300027646Tropical Forest SoilMATVKRYSVFCSKCNHKFPVFAMLPHTVDVNQWVKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA
Ga0209466_113380613300027646Tropical Forest SoilMATVKRYSIFCQKCNHKFPVFAMLPHTVEVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKASKKGA
Ga0209972_10002486143300027793Freshwater LakeMATVKRYNVYCPKCNQKFPIFASLHHSIDVDGWLKDKSDNHDCKAYADQLAKERSPRPINPLKASKKGA
Ga0209985_1047979523300027806Freshwater LakePSASVCAMGRGDEKGMATVKRYNIFCPKCNQRFPVFASLHHSIDVDSWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA
Ga0209023_1082388213300027870Freshwater And SedimentMATVKRYNIYCPKCLHKFPVFASLHHTISVDGWMKEKSDTHDCKAYADQLAKERAPRNLNPIKASKKGK
Ga0209465_1000653353300027874Tropical Forest SoilMATVKRYTIFCSKCNHKFPVFAMLPHTVNVNTWVKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA
Ga0207428_1000617763300027907Populus RhizosphereMATVKRYSVFCQKCNQKFPIFAMVPHTVNVDNWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0209382_1022632223300027909Populus RhizosphereMATVKRYTIFCQKCNHKFPVFAMLPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPINPLKASKKGA
Ga0209382_1027182323300027909Populus RhizosphereMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNSWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0209382_1035987013300027909Populus RhizosphereMATVKRYSIFCQKCNHKFPVFAMVPHTVDVNTWMKDKADNHDCKAYADQMAKERAPRPVNPLKAS
Ga0209382_1042011113300027909Populus RhizosphereMATVKRYSVFCQKCNQKFPVFAMLPHTVDVNKWMKDKSDNHDCKAYADQLAKERAPRPINPLKASKKGA
Ga0209382_1149092023300027909Populus RhizosphereMATVKRYSVFCPKCNHKFPVFAMLPHTVDVNAWMKEKADNHDCKTYSDQLAKERAPRPINPLKASKKGA
(restricted) Ga0233417_1014630623300028043SedimentMATVKRYTVFCQKCNHKFPVFAVLHHSIDADAWIKEKANNHDCKAYADQLAKESAPRPVNPIKASKKGA
Ga0272412_104580523300028647Activated SludgeMATVKRYNIFCPKCQQKFPIFASLHHSISVDGWIKDKSENHDCKAYADQLAKERAPRALNPIKASKKGK
Ga0272412_110650923300028647Activated SludgeMASVKRYSIFCQKCNQKFPVFAMVPHTVDVDAWIKDKADNHDCKAYADQLAKERAPRPINPLKASKKGK
Ga0272412_135626713300028647Activated SludgeMATVKRYLIHCPKCNHEFPVFASLFHSIDVSAWMKDKSDNHDCKAYADQLAKERAPRALNPIKASKKGK
Ga0268299_1000087983300028648Activated SludgeMATVKRYNIFCQKCNHKFPIFASLHHTIDVDGWIKDKAENHDCKAYADQLAKERAPRALNPIKASKKGK
Ga0307513_1045549413300031456EctomycorrhizaMATVKRYNIFCPKCQHKFPIFASLHHTIDADGWVKEKSDTHDCKAYADQLAKERAPRNLNPIKASKKGK
Ga0247727_1006448443300031576BiofilmMATVKRYSIYCPKCHHKFPVFAMLPHTVDVEGWMKEKADNHDCQAFADQLAKERVPRPINPLKASKKAA
Ga0247727_1007752953300031576BiofilmMATVKRYLIFCPKCNHKFPVFAVLPHTVAADVWTKEKSDTHDCKTYADQLAKERAPRPINPLKASKKSA
Ga0247727_1022573723300031576BiofilmMATVKRYLIFCPKCDHKFPVFATLPHTVDVDVWAKEKSDTHDCKAYADQLAKERVPRPVNPLKASKKSA
Ga0307416_10323475913300032002RhizosphereMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNSWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA
Ga0310906_1108525623300032013SoilMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNTWMKDKADNHDCKAYADQLAKERAPR
Ga0306920_10186916613300032261SoilMATVKRYRVFCPKCNHKFPVFAMLPHTVDVNIWMKDKADNHDCKAYADQLAKERAPRPINPLKASKKGA
Ga0334998_0150413_1195_13803300034019FreshwaterVYCPKCNQKFPIFASLHHSIDVDGWLKDKSDNHDCKAYADQLAKERSPRPINPLKASKKG
Ga0314780_020359_189_3983300034659SoilMATVKRYSVFCQKCNQKFPIFAMVPHTVNVDTWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0314782_140974_269_5113300034661SoilMATVKRYSVFCQKCNQKFPIFAMVPHTVNVDNWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGAPRQNDQKWRGL
Ga0314783_142857_4_2133300034662SoilMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNTWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA
Ga0314786_084954_342_5513300034664SoilMATVKRYSVFCQKCNQKFPIFAMVPHTVNVDNWMKDKADNHDCKAYADQLAKERTPRPINPLKASKKGA
Ga0314787_016752_110_3523300034665SoilMATVKRYSVFCQKCNQKFPIFAMLPHTVNVNTWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGAPRQNDQKWRGL
Ga0314788_176307_1_2043300034666SoilMATVKRYSVFCQKCNQKFPIFAMVPHTVNVDNWMKDKADNHDCKAYADQLAKERAPRPVNPLKASKKG
Ga0314795_070558_23_2323300034670SoilMATVKRYSIFCAKCNQKFPVFAMVPHNVDVNVWTKDKADNHDCKAYADQLAKERAPRPVNPLKASKKGA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.