Metagenome / Metatranscriptome Family F027452

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F027452
Family Type	Metagenome / Metatranscriptome
Number of Sequences	194
Average Sequence Length	39 residues
Representative Sequence	MQAAMAKRKRHSRVEIATKLAQANDLATQGKLQSEIARTLG
Number of Associated Samples	123
Number of Associated Scaffolds	194

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.02 %
% of genes near scaffold ends (potentially truncated)	95.88 %
% of genes from short scaffolds (< 2000 bps)	92.27 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (73.711 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.598 % of family members)
Environment Ontology (ENVO)	Unclassified (53.093 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.969 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.78% β-sheet: 0.00% Coil/Unstructured: 65.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 194 Family Scaffolds
PF04392	ABC_sub_bind	2.06
PF00196	GerE	1.55
PF01527	HTH_Tnp_1	1.55
PF00550	PP-binding	1.03
PF00293	NUDIX	1.03
PF02265	S1-P1_nuclease	1.03
PF05014	Nuc_deoxyrib_tr	1.03
PF13683	rve_3	1.03
PF00232	Glyco_hydro_1	0.52
PF13276	HTH_21	0.52
PF00535	Glycos_transf_2	0.52
PF01609	DDE_Tnp_1	0.52
PF03737	RraA-like	0.52
PF02566	OsmC	0.52
PF04773	FecR	0.52
PF03237	Terminase_6N	0.52
PF08308	PEGA	0.52
PF00872	Transposase_mut	0.52
PF00589	Phage_integrase	0.52
PF06035	Peptidase_C93	0.52
PF00239	Resolvase	0.52
PF01695	IstB_IS21	0.52
PF13384	HTH_23	0.52
PF13340	DUF4096	0.52
PF01370	Epimerase	0.52
PF03401	TctC	0.52

COG ID	Name	Functional Category	% Frequency in 194 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.06
COG3613	Nucleoside 2-deoxyribosyltransferase	Nucleotide transport and metabolism [F]	1.03
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.52
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.52
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.52
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.52
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.52
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.52
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.52
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.52
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.52
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.52
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.52
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.52
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.52
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.52
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.52
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
All Organisms	root	All Organisms	26.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
cellular organisms	root	All Organisms → cellular organisms	26.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.06 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.06 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.06 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.03 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.06 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	1.03 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	1.03 %
Shinella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.06 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.03 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1.03 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.52 %
Rhodopseudomonas pentothenatexigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas pentothenatexigens	0.52 %
unclassified Shinella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.06 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	1.03 %
Bradyrhizobium sp. WSM3983	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	1.03 %
Shinella sp. DD12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella → Shinella sp. DD12	0.52 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.52 %
Rhodopseudomonas pentothenatexigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas pentothenatexigens	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.06 %
Geobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1.03 %
Bradyrhizobium sp. WSM3983	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	1.03 %
Shinella sp. DD12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella → Shinella sp. DD12	0.52 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.52 %
Rhodopseudomonas pentothenatexigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas pentothenatexigens	0.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1709091	Not Available	603	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100674510	Not Available	872	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1019568	Not Available	1077	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1040283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	724	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1061479	Not Available	573	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10029901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1473	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10134607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	599	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10127563	Not Available	531	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1011814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1504	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1067145	Not Available	565	Open in IMG/M
3300000953\|JGI11615J12901_13134780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	677	Open in IMG/M
3300001867\|JGI12627J18819_10172410	Not Available	877	Open in IMG/M
3300004268\|Ga0066398_10059078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	798	Open in IMG/M
3300005174\|Ga0066680_10943826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	509	Open in IMG/M
3300005332\|Ga0066388_104094136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300005363\|Ga0008090_10147509	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300005437\|Ga0070710_10702405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	714	Open in IMG/M
3300005445\|Ga0070708_100886984	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005713\|Ga0066905_101422106	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005764\|Ga0066903_100536166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2000	Open in IMG/M
3300005764\|Ga0066903_100613021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1890	Open in IMG/M
3300005764\|Ga0066903_100809499	Not Available	1677	Open in IMG/M
3300005764\|Ga0066903_102335914	Not Available	1033	Open in IMG/M
3300005764\|Ga0066903_104932777	Not Available	708	Open in IMG/M
3300005764\|Ga0066903_105053271	Not Available	699	Open in IMG/M
3300005764\|Ga0066903_106776506	Not Available	595	Open in IMG/M
3300005764\|Ga0066903_108976568	Not Available	506	Open in IMG/M
3300006028\|Ga0070717_10180129	All Organisms → cellular organisms → Bacteria → Proteobacteria	1841	Open in IMG/M
3300006028\|Ga0070717_11648017	Not Available	581	Open in IMG/M
3300006797\|Ga0066659_11510270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	563	Open in IMG/M
3300006845\|Ga0075421_100814619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300006846\|Ga0075430_100750694	Not Available	804	Open in IMG/M
3300006880\|Ga0075429_100767454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	845	Open in IMG/M
3300006904\|Ga0075424_100526749	All Organisms → cellular organisms → Bacteria → Proteobacteria	1262	Open in IMG/M
3300007076\|Ga0075435_100915885	Not Available	765	Open in IMG/M
3300009100\|Ga0075418_10132707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2648	Open in IMG/M
3300010043\|Ga0126380_11436956	Not Available	608	Open in IMG/M
3300010046\|Ga0126384_10920441	Not Available	791	Open in IMG/M
3300010047\|Ga0126382_11710088	Not Available	588	Open in IMG/M
3300010358\|Ga0126370_10676707	Not Available	903	Open in IMG/M
3300010358\|Ga0126370_11017720	Not Available	757	Open in IMG/M
3300010359\|Ga0126376_11194808	Not Available	775	Open in IMG/M
3300010360\|Ga0126372_10699811	Not Available	989	Open in IMG/M
3300010361\|Ga0126378_10207219	Not Available	2040	Open in IMG/M
3300010361\|Ga0126378_12756696	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010361\|Ga0126378_12912079	Not Available	546	Open in IMG/M
3300010361\|Ga0126378_13383769	Not Available	506	Open in IMG/M
3300010362\|Ga0126377_10212509	Not Available	1861	Open in IMG/M
3300010366\|Ga0126379_10409488	Not Available	1406	Open in IMG/M
3300010366\|Ga0126379_10650073	Not Available	1144	Open in IMG/M
3300010366\|Ga0126379_11993410	Not Available	683	Open in IMG/M
3300010376\|Ga0126381_100271824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	2308	Open in IMG/M
3300010376\|Ga0126381_102012720	Not Available	832	Open in IMG/M
3300010398\|Ga0126383_10726493	Not Available	1073	Open in IMG/M
3300010398\|Ga0126383_10971326	Not Available	937	Open in IMG/M
3300010398\|Ga0126383_11393593	Not Available	791	Open in IMG/M
3300010398\|Ga0126383_11678726	Not Available	724	Open in IMG/M
3300010398\|Ga0126383_12475318	Not Available	604	Open in IMG/M
3300010398\|Ga0126383_12703333	Not Available	579	Open in IMG/M
3300010398\|Ga0126383_12716745	Not Available	578	Open in IMG/M
3300010398\|Ga0126383_12881078	Not Available	562	Open in IMG/M
3300010398\|Ga0126383_12979584	Not Available	553	Open in IMG/M
3300012096\|Ga0137389_10100124	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300012202\|Ga0137363_10658501	Not Available	885	Open in IMG/M
3300012202\|Ga0137363_11229033	Not Available	636	Open in IMG/M
3300012204\|Ga0137374_10197001	Not Available	1740	Open in IMG/M
3300012205\|Ga0137362_10647168	Not Available	910	Open in IMG/M
3300012362\|Ga0137361_10693494	Not Available	930	Open in IMG/M
3300012923\|Ga0137359_10783936	Not Available	827	Open in IMG/M
3300012939\|Ga0162650_100054378	Not Available	661	Open in IMG/M
3300012971\|Ga0126369_12014594	Not Available	665	Open in IMG/M
3300015374\|Ga0132255_101532924	Not Available	1009	Open in IMG/M
3300016270\|Ga0182036_10641013	Not Available	855	Open in IMG/M
3300016270\|Ga0182036_11158241	Not Available	642	Open in IMG/M
3300016294\|Ga0182041_11044401	Not Available	740	Open in IMG/M
3300016341\|Ga0182035_10186022	Not Available	1631	Open in IMG/M
3300016341\|Ga0182035_10222717	Not Available	1506	Open in IMG/M
3300016341\|Ga0182035_10430800	Not Available	1114	Open in IMG/M
3300016341\|Ga0182035_11751355	Not Available	562	Open in IMG/M
3300016357\|Ga0182032_10184809	Not Available	1574	Open in IMG/M
3300016357\|Ga0182032_11800976	Not Available	535	Open in IMG/M
3300016357\|Ga0182032_11813522	Not Available	533	Open in IMG/M
3300016387\|Ga0182040_10412853	Not Available	1062	Open in IMG/M
3300016387\|Ga0182040_10658479	Not Available	853	Open in IMG/M
3300016404\|Ga0182037_10038870	Not Available	3093	Open in IMG/M
3300016404\|Ga0182037_10271931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300016404\|Ga0182037_11575607	Not Available	584	Open in IMG/M
3300016404\|Ga0182037_11786899	Not Available	549	Open in IMG/M
3300016422\|Ga0182039_10295157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1340	Open in IMG/M
3300016422\|Ga0182039_11191438	Not Available	688	Open in IMG/M
3300018051\|Ga0184620_10112395	Not Available	851	Open in IMG/M
3300018072\|Ga0184635_10137072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	975	Open in IMG/M
3300018468\|Ga0066662_12194293	Not Available	579	Open in IMG/M
3300018468\|Ga0066662_12556624	Not Available	539	Open in IMG/M
3300019996\|Ga0193693_1063408	Not Available	558	Open in IMG/M
3300020016\|Ga0193696_1115957	Not Available	681	Open in IMG/M
3300020199\|Ga0179592_10188951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300021510\|Ga0222621_1069048	Not Available	745	Open in IMG/M
3300021560\|Ga0126371_10112641	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	2730	Open in IMG/M
3300021560\|Ga0126371_10487582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1380	Open in IMG/M
3300021560\|Ga0126371_12364267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas pentothenatexigens	642	Open in IMG/M
3300021560\|Ga0126371_13312858	Not Available	544	Open in IMG/M
3300021560\|Ga0126371_13482346	Not Available	531	Open in IMG/M
3300026297\|Ga0209237_1239784	Not Available	558	Open in IMG/M
3300027655\|Ga0209388_1080491	Not Available	938	Open in IMG/M
3300027846\|Ga0209180_10540012	Not Available	650	Open in IMG/M
3300027874\|Ga0209465_10102082	Not Available	1407	Open in IMG/M
3300027874\|Ga0209465_10685615	Not Available	503	Open in IMG/M
3300027903\|Ga0209488_10569658	Not Available	824	Open in IMG/M
3300031545\|Ga0318541_10361773	Not Available	810	Open in IMG/M
3300031545\|Ga0318541_10364831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300031546\|Ga0318538_10046808	Not Available	2097	Open in IMG/M
3300031546\|Ga0318538_10304602	Not Available	859	Open in IMG/M
3300031561\|Ga0318528_10097588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella → Shinella sp. DD12	1539	Open in IMG/M
3300031561\|Ga0318528_10779463	Not Available	511	Open in IMG/M
3300031572\|Ga0318515_10083116	All Organisms → cellular organisms → Bacteria → Proteobacteria	1662	Open in IMG/M
3300031572\|Ga0318515_10560744	Not Available	608	Open in IMG/M
3300031640\|Ga0318555_10137749	Not Available	1303	Open in IMG/M
3300031679\|Ga0318561_10201195	Not Available	1080	Open in IMG/M
3300031680\|Ga0318574_10254957	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300031680\|Ga0318574_10292008	Not Available	947	Open in IMG/M
3300031681\|Ga0318572_10304397	Not Available	942	Open in IMG/M
3300031682\|Ga0318560_10217438	Not Available	1023	Open in IMG/M
3300031719\|Ga0306917_10587756	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300031719\|Ga0306917_11569888	Not Available	505	Open in IMG/M
3300031724\|Ga0318500_10165635	Not Available	1046	Open in IMG/M
3300031744\|Ga0306918_11350462	Not Available	547	Open in IMG/M
3300031747\|Ga0318502_10111459	Not Available	1527	Open in IMG/M
3300031747\|Ga0318502_10293254	Not Available	955	Open in IMG/M
3300031748\|Ga0318492_10432280	Not Available	694	Open in IMG/M
3300031751\|Ga0318494_10230509	Not Available	1059	Open in IMG/M
3300031765\|Ga0318554_10106038	Not Available	1582	Open in IMG/M
3300031768\|Ga0318509_10712951	Not Available	556	Open in IMG/M
3300031771\|Ga0318546_10117159	Not Available	1766	Open in IMG/M
3300031771\|Ga0318546_10912315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	618	Open in IMG/M
3300031777\|Ga0318543_10580263	Not Available	503	Open in IMG/M
3300031778\|Ga0318498_10350730	Not Available	659	Open in IMG/M
3300031781\|Ga0318547_10550311	Not Available	714	Open in IMG/M
3300031782\|Ga0318552_10112533	Not Available	1351	Open in IMG/M
3300031782\|Ga0318552_10732303	Not Available	505	Open in IMG/M
3300031792\|Ga0318529_10104257	Not Available	1282	Open in IMG/M
3300031798\|Ga0318523_10276113	Not Available	839	Open in IMG/M
3300031799\|Ga0318565_10392329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300031805\|Ga0318497_10225026	Not Available	1038	Open in IMG/M
3300031805\|Ga0318497_10615696	Not Available	609	Open in IMG/M
3300031821\|Ga0318567_10185744	Not Available	1158	Open in IMG/M
3300031832\|Ga0318499_10071850	Not Available	1316	Open in IMG/M
3300031833\|Ga0310917_10086098	Not Available	2000	Open in IMG/M
3300031860\|Ga0318495_10275801	Not Available	750	Open in IMG/M
3300031860\|Ga0318495_10440505	Not Available	572	Open in IMG/M
3300031879\|Ga0306919_10035323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3191	Open in IMG/M
3300031879\|Ga0306919_10991480	Not Available	642	Open in IMG/M
3300031890\|Ga0306925_10222110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2037	Open in IMG/M
3300031890\|Ga0306925_10841705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300031890\|Ga0306925_11592234	Not Available	635	Open in IMG/M
3300031894\|Ga0318522_10087662	All Organisms → cellular organisms → Bacteria → Proteobacteria	1142	Open in IMG/M
3300031894\|Ga0318522_10431176	Not Available	500	Open in IMG/M
3300031896\|Ga0318551_10490763	Not Available	704	Open in IMG/M
3300031897\|Ga0318520_10051971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2157	Open in IMG/M
3300031912\|Ga0306921_11146872	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300031941\|Ga0310912_10294657	Not Available	1255	Open in IMG/M
3300031942\|Ga0310916_10144961	Not Available	1954	Open in IMG/M
3300031945\|Ga0310913_11177990	Not Available	534	Open in IMG/M
3300031946\|Ga0310910_10292627	Not Available	1280	Open in IMG/M
3300031954\|Ga0306926_10287630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2035	Open in IMG/M
3300031954\|Ga0306926_11562977	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031959\|Ga0318530_10381882	Not Available	584	Open in IMG/M
3300031981\|Ga0318531_10342297	Not Available	676	Open in IMG/M
3300031981\|Ga0318531_10590297	Not Available	503	Open in IMG/M
3300032001\|Ga0306922_10498931	Not Available	1297	Open in IMG/M
3300032001\|Ga0306922_11745742	Not Available	615	Open in IMG/M
3300032001\|Ga0306922_12011732	Not Available	562	Open in IMG/M
3300032009\|Ga0318563_10795162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300032025\|Ga0318507_10345113	Not Available	648	Open in IMG/M
3300032039\|Ga0318559_10110201	Not Available	1226	Open in IMG/M
3300032039\|Ga0318559_10136381	Not Available	1108	Open in IMG/M
3300032041\|Ga0318549_10426737	Not Available	597	Open in IMG/M
3300032054\|Ga0318570_10250856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300032055\|Ga0318575_10244185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300032055\|Ga0318575_10453187	Not Available	651	Open in IMG/M
3300032055\|Ga0318575_10655225	Not Available	531	Open in IMG/M
3300032059\|Ga0318533_10540758	Not Available	854	Open in IMG/M
3300032059\|Ga0318533_11206857	Not Available	553	Open in IMG/M
3300032060\|Ga0318505_10038105	Not Available	2004	Open in IMG/M
3300032064\|Ga0318510_10256319	Not Available	720	Open in IMG/M
3300032066\|Ga0318514_10106714	Not Available	1426	Open in IMG/M
3300032067\|Ga0318524_10638873	Not Available	561	Open in IMG/M
3300032090\|Ga0318518_10097660	Not Available	1462	Open in IMG/M
3300032091\|Ga0318577_10530615	Not Available	560	Open in IMG/M
3300033289\|Ga0310914_10053936	All Organisms → cellular organisms → Bacteria → Proteobacteria	3325	Open in IMG/M
3300033289\|Ga0310914_10310564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1422	Open in IMG/M
3300033289\|Ga0310914_10355592	Not Available	1324	Open in IMG/M
3300033289\|Ga0310914_11712790	Not Available	532	Open in IMG/M
3300033290\|Ga0318519_10231682	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.39%
Host-Associated	Host-Associated	3.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.85%
Plants	Host-Associated → Plants	3.61%
Aquatic	Environmental → Aquatic	1.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.09%
Sediment	Environmental → Aquatic → Sediment	1.55%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.05%
Loam	Environmental → Terrestrial → Soil → Loam	9.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.52%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.12%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.52%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.52%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.52%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_17090911	3300000033	Soil	MAKKRKHAKXEIAGMLAQAXXLAXXGKIQSEIARTLGGKG*
INPhiseqgaiiFebDRAFT_1006745103	3300000364	Soil	MAKKRRHSKAEITALLAQADDLARQGKLQSEIART
AF_2010_repII_A01DRAFT_10195682	3300000580	Forest Soil	MPKKKRHSRVEIASKLAQANDLATQGKLQSEIARTL
AF_2010_repII_A01DRAFT_10402833	3300000580	Forest Soil	MKIEDRRANEVAKKKRHLRVEIATKLAQANGLATQGKLQSDIARTRSV*
AF_2010_repII_A01DRAFT_10614792	3300000580	Forest Soil	MATRKKYSEAEIARKLAQANELATQGKLQSEIASTL
AF_2010_repII_A1DRAFT_100299014	3300000597	Forest Soil	MGEMQAAIAKRKKHSRVEIATKLAQANDLATQGKLQSEIARTS*
AF_2010_repII_A1DRAFT_101346071	3300000597	Forest Soil	MNLGG*KQGAMARQKRHSKVEIATKLAQANDLAGQGKPQSEIARTLG
AF_2010_repII_A001DRAFT_101275632	3300000793	Forest Soil	MAKKKRHSRVEIASKLAQANDLAAQGKLQTEIARTLGVS
AP72_2010_repI_A001DRAFT_10118143	3300000893	Forest Soil	MQAAMAKKKRHSRVEIASKLAQANELATQGKLQSEIARTLGVTV
AP72_2010_repI_A001DRAFT_10671452	3300000893	Forest Soil	MQATMTQKKRHSTVEIATKLAQANDLATQGKLQSEIA
JGI11615J12901_131347802	3300000953	Soil	MGRARKQHSRGEIARKLAQANRLARQGKLQSEIARTLGVSVM
JGI12627J18819_101724101	3300001867	Forest Soil	MAKKKRHSRAEIASKLTQANDLATQGKLQSEIARTLGV
Ga0066398_100590781	3300004268	Tropical Forest Soil	MAQNKRRSRVEIAAKLAQASDLASQGKLQSEIARKLGGAL*
Ga0066680_109438261	3300005174	Soil	MGGRTQAAMAKKKRHSRVEIASKLAQANDLATQGKLQSEIAR
Ga0066388_1040941361	3300005332	Tropical Forest Soil	MLVAAAGQAAMVRPKRHSRVEVAKKLAQANGLARQGKLQSEIA
Ga0008090_101475092	3300005363	Tropical Rainforest Soil	MGRSVVMAKKKHSRVAIAAKLVQANNLARRGKLQSEIART
Ga0070710_107024052	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKRKHPKAEITALLAQADDLARQGKLQSEIARTLGVSVM
Ga0070708_1008869842	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKKRHSKVEIASKLAQAHDLATQQGKLQSDIARTLGVSV
Ga0066905_1014221062	3300005713	Tropical Forest Soil	MANKRRHSRAEIATKLAQANELATRGKLQSDIARTL
Ga0066903_1005361661	3300005764	Tropical Forest Soil	MTKRKHSRFEIATKLAQANELATRGKLQSEIARTLG
Ga0066903_1006130215	3300005764	Tropical Forest Soil	MAKKRRHSRAEIATKLAQANGLATQGKLQSDIARTLGVSV
Ga0066903_1008094991	3300005764	Tropical Forest Soil	MEAAMAKKRRHSRAEIATKLAQANGLATQGKLQSDIARTLG
Ga0066903_1023359143	3300005764	Tropical Forest Soil	MQAAMAKRKRHSRVEMATKLAQANELATQGKLQSEIAR
Ga0066903_1049327772	3300005764	Tropical Forest Soil	MPRKKRHSRVEIATKLMQANDLATQGKLQSEIARTLGV
Ga0066903_1050532711	3300005764	Tropical Forest Soil	MGQADIPKRKRHSRVEIATKLAQANDLATQGKLQSEIARTLDVSVM
Ga0066903_1067765061	3300005764	Tropical Forest Soil	MAKKKKHSRVEIASKLAQANDLATQGKLQSEIARTLGV
Ga0066903_1089765683	3300005764	Tropical Forest Soil	MQAAMVKKRRHSRAEIATKLAQANELATRGKLQSE
Ga0070717_101801291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNMKGRMQAAMAKKKRHSRVEIASKLAQANDLATQGKLQSEIA
Ga0070717_116480171	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATKKRHSRAEIASKLAQANDLTTRGKLQSEIARAL
Ga0066659_115102701	3300006797	Soil	MQAAMAKRKRHSRVEIATKLAQATDLATQGKSQRDIAHTLGVS
Ga0075421_1008146192	3300006845	Populus Rhizosphere	MQAAKVKKKRHSRVEIATKLAEANDLAMQGKRRKEIARTLGVSVM
Ga0075430_1007506941	3300006846	Populus Rhizosphere	MAKKQRHSKVEIATRLTQANKLARQGKLQSEIARTL
Ga0075429_1007674543	3300006880	Populus Rhizosphere	MQAAKVKKKRHSRVEIATKLAEANDLATQGKLQSEIARTLG
Ga0075424_1005267491	3300006904	Populus Rhizosphere	MQAAMAKKKRHSRVEVATKLAQATDLATRGKLQSEIARTLGVS
Ga0075435_1009158853	3300007076	Populus Rhizosphere	MAKKKNHSTVEIASKLAQANDLATQGKLQSEIART
Ga0075418_101327071	3300009100	Populus Rhizosphere	MQAAKVKKKRHSRVEIATKLAEANDLATQGKLQSEIARTLGVS
Ga0126380_114369561	3300010043	Tropical Forest Soil	MNMKGRMQAAMAKKKRHSRVEIASKLAQANDLATQGKLQSEIAR
Ga0126384_109204412	3300010046	Tropical Forest Soil	MAKKKRHSRVEIASKLAQANDLAAQGKLQTEIARTL
Ga0126382_117100881	3300010047	Tropical Forest Soil	MNVGRLNAAAMAKQKRHSRAEIATKLAQANDLARQGKVQSEIA
Ga0126370_106767071	3300010358	Tropical Forest Soil	MQAAMDKRKRHSRVEIATKLTQANDLARQGKLQSEIARTLGV
Ga0126370_110177201	3300010358	Tropical Forest Soil	MAKKKKHSRAEIASKLAQANDLATQGKLQSEIARTLGVS
Ga0126376_111948081	3300010359	Tropical Forest Soil	MAKRKRHSRAEIASKLAQANDLATQGKLQSAIARTLGVSV
Ga0126372_106998111	3300010360	Tropical Forest Soil	MAKKKRHSRVEIATKLAQANGLATQGKLQSEIARTL
Ga0126378_102072194	3300010361	Tropical Forest Soil	MQAAMAKKKRHSRVEIATKLARANDLATQGKLQSEIAR
Ga0126378_127566961	3300010361	Tropical Forest Soil	MQAAKVKKKRHSRVEIATKLAEANDLATQGKLQSEIA
Ga0126378_129120791	3300010361	Tropical Forest Soil	MAKKKRHSRAEIASKLAQANDLATQGKQQSEIARAL
Ga0126378_133837691	3300010361	Tropical Forest Soil	MNMKGRMQTAMAKKKRHSRVEIASKLAQANDLATQGK
Ga0126377_102125091	3300010362	Tropical Forest Soil	MQAAMAKKKRHSRVEIASKLAQANDLATQGKLQSEIARTL
Ga0126379_104094881	3300010366	Tropical Forest Soil	MQAAMAKKKRHSRVEIATKLAQANDLATQGKLQSEIAR
Ga0126379_106500731	3300010366	Tropical Forest Soil	MAQKKRHSRVEIAAKLAQASDLASQGKLQSEIARKLGGAL*
Ga0126379_119934102	3300010366	Tropical Forest Soil	MQAAMAKRKRHTRLEIATKLAQANDLATHGKLQSEIARTLGV
Ga0126381_1002718242	3300010376	Tropical Forest Soil	MAQNKRHSRVEIAAKLAQASDLASQGKLQSEIARKLGGAL*
Ga0126381_1020127203	3300010376	Tropical Forest Soil	MQAAKVKKKRHSRVEIATNDLATQGKLQSEIARTLGVSVM
Ga0126383_107264933	3300010398	Tropical Forest Soil	MSRKEDQMTKKRKHSKAEIAAKLAEADDLVTQGKLQSEIARALGVSVM
Ga0126383_109713261	3300010398	Tropical Forest Soil	MAKKKRHSRVEIASKLTRAHDLATQGKLQSEIART
Ga0126383_113935932	3300010398	Tropical Forest Soil	MQAAMAQKKRHSRVDIATKLAQANDLATQGKLQSE
Ga0126383_116787261	3300010398	Tropical Forest Soil	MARLKRYSRVEVATKLAQANDLARQGKPQSEIART
Ga0126383_124753181	3300010398	Tropical Forest Soil	MNVGRLNAAAMAKQKRHSRVEIATKLAQANDLARQGKVQSEIARTL
Ga0126383_127033331	3300010398	Tropical Forest Soil	MAKKKRHSRVEIASKLAQANDLATQGKLQTEIARTLG
Ga0126383_127167451	3300010398	Tropical Forest Soil	MAKKKRHSRAEIATKLVQANEMATQGKLQSEIARALGVS
Ga0126383_128810782	3300010398	Tropical Forest Soil	MQATMTQKKRHSTVEIATKLAQANDLATQGKLQSEIAHTLGVSV
Ga0126383_129795841	3300010398	Tropical Forest Soil	MLGSGNKGRRETTRVKRKKHSRAEIASKLTQANELATQGKLQSEIARALGVS
Ga0137389_101001243	3300012096	Vadose Zone Soil	MNIGGRTQAAMAKKKRHSKVEIATKLAQANGLATQGKLQSDIARTLGVSVM
Ga0137363_106585011	3300012202	Vadose Zone Soil	MNMKGRMQAAMAKKKRHSRVEVASKLAQANDLATQGKLQSEIART
Ga0137363_112290331	3300012202	Vadose Zone Soil	MQAAMAKKKRHSRVEIASKLAQANDLATQGKLQSEIA
Ga0137374_101970011	3300012204	Vadose Zone Soil	MGKKKRYSRVEIATKLAQANDLAMQGKAQSEIARTLGVS
Ga0137362_106471681	3300012205	Vadose Zone Soil	MQAAMAKKKRHSRVEIATKLAQATDLAMQGKSQRE
Ga0137361_106934941	3300012362	Vadose Zone Soil	MQAAMAKKKRHSRVEIATKLAQATDLAMQGKSQREIAHTLS
Ga0137359_107839361	3300012923	Vadose Zone Soil	MNMKGRMQTAMAKKKRHSRVEIASKLAQANDLATQGKLQSEIARTLGV
Ga0162650_1000543781	3300012939	Soil	MRKRKHPKAEIAAKLAQAGDLAAQGKLQSEIARALD
Ga0126369_120145941	3300012971	Tropical Forest Soil	MAAGQAAMKRHSRVEVATKLAQANDLARQGKLQSEIARTLGVS
Ga0132255_1015329243	3300015374	Arabidopsis Rhizosphere	MAKKAKHSKAEIAAKLAQAGDLATQGKLQSEIARTLGV
Ga0182036_106410131	3300016270	Soil	MAAGQAAMKRHSRVEVATKLAQANDLARQGKLQSEIART
Ga0182036_111582412	3300016270	Soil	MQASVAKRKRHTRLEIATKLAQANELATQGKLQSEIAR
Ga0182041_110444011	3300016294	Soil	MQAAMAQKKRHSRVEIATKLAQANDLATLGKLQSEIAHALGVSV
Ga0182035_101860221	3300016341	Soil	MQAKKRRHSRAEIATKLAQANELATRGKLQSDIART
Ga0182035_102227174	3300016341	Soil	MQAAMAKRKRHTRLEIATKLAQANELATQGKLQSEIARTLGVS
Ga0182035_104308003	3300016341	Soil	MQASVAKRKRHTRLEIATKLAQANELATQGKLQSEIART
Ga0182035_117513551	3300016341	Soil	MARRHSRAEIATKLARANELATRGELQSEIARMLGVS
Ga0182032_101848091	3300016357	Soil	MQAAMAKKRRHSRAEIATKLAQANELATRGKLQSDIART
Ga0182032_118009761	3300016357	Soil	MAKKRHSRVEIATKLAQANGLATQGKLQSDIARTLGV
Ga0182032_118135221	3300016357	Soil	MAKKKRHSRVEIASKLAQANDLATQGKLQSEIARTLG
Ga0182040_104128533	3300016387	Soil	MQASIAKRKRHTTVEIATKLAQANDLATRGKLQSEI
Ga0182040_106584791	3300016387	Soil	MAKKTKHSKAQIAGKLAEANDLAEQGKSQSEIARTLG
Ga0182037_100388701	3300016404	Soil	MQAAMAKKKRHSRMEIATKLAQATDLATQGRSQREIAHMLG
Ga0182037_102719313	3300016404	Soil	MQAAMAKKRRQSRAEIATKLAQANELATRGKLQSEIAR
Ga0182037_115756072	3300016404	Soil	MQASIAKRKRHTRLEIATKLAQANELATQGKLQSDIAR
Ga0182037_117868991	3300016404	Soil	MAKKKRHSRAEIATKLAQANGLATQGKLQSDIARTLGV
Ga0182039_102951573	3300016422	Soil	MQAAVAKKRRHSRAEIATKLAQANGLARQGKLQSD
Ga0182039_111914381	3300016422	Soil	MRAVMAKKKRHSRVEIATKLAQANDLATQGKLQSEIARTLGVS
Ga0184620_101123951	3300018051	Groundwater Sediment	MEVDYCAMAKMKRHSKVEIATKLAQANDLMTQGKLQSDIART
Ga0184635_101370723	3300018072	Groundwater Sediment	MTTKRKHSRPELAAMLARANEMAAQGKLQSEIANPLGI
Ga0066662_121942932	3300018468	Grasslands Soil	MQAAMAKKKRHARVEIASKLAQANDLATQGELQSEIPRTLGVIV
Ga0066662_125566241	3300018468	Grasslands Soil	MAKKKRHSRVEIASKLALARDLATQGKLQSEIARALGVSV
Ga0193693_10634081	3300019996	Soil	MKKRKHPKAEITTKLAQADDLAAQGKLQSEIARALGKHANL
Ga0193696_11159571	3300020016	Soil	MQPAMARKKKHSGMEIATKLAQASDLATQGKLQSEIARTLG
Ga0179592_101889514	3300020199	Vadose Zone Soil	MAKKKRHSRVEVATKLAQATDLATRGKLQSEIARRLGV
Ga0222621_10690481	3300021510	Groundwater Sediment	MQPAMARKKKHSGMEIATKLAQASDLATQGKLQSE
Ga0126371_101126412	3300021560	Tropical Forest Soil	MAQNKRHSRVEIAAKLAQASDLASQGKLQSEIARKLGGAL
Ga0126371_104875821	3300021560	Tropical Forest Soil	MARQKRHSKVEIATKLAQANDLAGQGKPQSEIART
Ga0126371_123642671	3300021560	Tropical Forest Soil	MAKKRRHSRAEIATKLAQANELATRGKLQSDIARTLGVS
Ga0126371_133128582	3300021560	Tropical Forest Soil	MQAAKVKKKRHSRVEIATNDLATQGKLQSEIARTLGVSV
Ga0126371_134823461	3300021560	Tropical Forest Soil	MAKKKRHSRVEIATKLAEANDLATQGKLQSEIARTLGVS
Ga0209237_12397842	3300026297	Grasslands Soil	MQAAMAKKKKHSRVEIASKLAQANDLATQGKLQSEIART
Ga0209388_10804911	3300027655	Vadose Zone Soil	MNMKGRMQAAMAKKKRHSRVEISSKLAQANDLATQGKLQSE
Ga0209180_105400121	3300027846	Vadose Zone Soil	MQAAMAKKKRHSRVEIASKLAQANDLATQGKLQSEIAHRL
Ga0209465_101020822	3300027874	Tropical Forest Soil	MQAAMAKRKRHSRVEIATKLAQANDLATQGKLQSEIART
Ga0209465_106856152	3300027874	Tropical Forest Soil	MAKKKKHSRAEIATKLTQANELVTQGKLQSEIARILGVSV
Ga0209488_105696581	3300027903	Vadose Zone Soil	MNMKGRMQAAMAKKKRHSRVEIASKLAQANDLATQGKLQSEI
Ga0318541_103617732	3300031545	Soil	MQAAMAKKKRHSRAEIATKLAQANELATRGKLQSEIARMLG
Ga0318541_103648312	3300031545	Soil	MANKRRHSRAEIATKLAQANELATRGKLQSDIARTLGVS
Ga0318538_100468082	3300031546	Soil	MLVTAAGQAAMAGLKRHSRVEVATKLAQANDLARQGKLESEIART
Ga0318538_103046021	3300031546	Soil	MAKKKRHSRVEIATKLAQANGLATQGKLQSDIARTLGVS
Ga0318528_100975881	3300031561	Soil	MAKKKRHSRVEIATKLAQANGLATQGKLQSDIARTLGV
Ga0318528_107794632	3300031561	Soil	MQAAMTQKKRHSTVEIATKLAQANDLATQGKLQSEIAHTLGVS
Ga0318515_100831161	3300031572	Soil	MLVTAAGQAAMAGLKRHSRVEVATKLAQANDLARQGKLESEIARTLGVS
Ga0318515_105607441	3300031572	Soil	MAKKTKHSKAQIAGKLAEANDLAEQGKSQSEIARTLGV
Ga0318555_101377493	3300031640	Soil	MQAAIAKKKRHSRVEIATKLAQATDLATQGRSQREIAHM
Ga0318561_102011951	3300031679	Soil	MQAAMAKRKRHSRVEIATKLAQANDLATQGKLQSEI
Ga0318574_102549573	3300031680	Soil	MAKKKRHSRVKIATKLAQANDLTTQGKLQSESARTLGVS
Ga0318574_102920082	3300031680	Soil	MQAAMAKRKRHSRVEMATKLAQANDLATQGKLQSEIARTLGVS
Ga0318572_103043973	3300031681	Soil	MAKKKRYSRVEIASKLAQANDLATQGKLQSEIARTLGV
Ga0318560_102174381	3300031682	Soil	MAKRKRHSRAEIATKLAQANELVTQGKLQSEVARTLGVS
Ga0306917_105877563	3300031719	Soil	MQAKKRRHSRAEIATKLAQANELATRGKLQSDIARTL
Ga0306917_115698881	3300031719	Soil	MQAAMAKKKRHSRMEIATKLAQATDLATQGRSQREIAHMLGVS
Ga0318500_101656352	3300031724	Soil	MNIGGRLQAAMAKKKKHSRVEIASKLAQANDLATQGKLQSEIARTLG
Ga0306918_113504621	3300031744	Soil	MAKKRRHSSAEIARKLAHANELATRGKLQSDIART
Ga0318502_101114592	3300031747	Soil	MQAAMAKKRRHSRAEIATKLAQANELATRGKLQSDIARTLG
Ga0318502_102932541	3300031747	Soil	MAKKKRHSRVEIVSKLAQANDLATQGKLQSEISRTLGVS
Ga0318492_104322802	3300031748	Soil	MATKKRHSSVEIATKLAQANKLATQGKLQSEIARTLG
Ga0318494_102305091	3300031751	Soil	MAKKKRHSRAEIASKLAQANGLATQGKLQSDIARTLGVS
Ga0318554_101060381	3300031765	Soil	MNMKGRMQTAMAKKKRHSRVEIASKLAQANGLATQGKLQSE
Ga0318509_107129511	3300031768	Soil	MQAAMAKRKKHSRAEMATKLAQANELATQGKLQSEIA
Ga0318546_101171591	3300031771	Soil	MAKKKRHSRVEIASKLAQANDLATQGKLRSEIARTLGVS
Ga0318546_109123152	3300031771	Soil	MQAAMPKTKRYARAEIATKLAQANDLAMQGKPQSEIARTLGVS
Ga0318543_105802632	3300031777	Soil	MATKKRHSSVEIATKLAQANKLATQGKLQSEIARTLGV
Ga0318498_103507301	3300031778	Soil	MAAGQAAMKRHSRVEVATKLAQANDLARQGKLQSEIAR
Ga0318547_105503113	3300031781	Soil	MQAAMAKRKRHTRLEIATKLAQANELATQGKLQSEIARTLGVSA
Ga0318552_101125334	3300031782	Soil	MAKKKRHSRAEIASKLAQANGLATQGKLQSDIARTL
Ga0318552_107323031	3300031782	Soil	MAKKKRHSRAEVATKLAQANELATQGKLQSEIARTLGVS
Ga0318529_101042573	3300031792	Soil	MARRHSMVEIATKLAQANDLARQGKLQSEIARTLGVS
Ga0318523_102761131	3300031798	Soil	MAKKRRHSRAEIATKLARANELATRGELQSEIARMLGVS
Ga0318565_103923291	3300031799	Soil	MQAAMAKRKRHSRVEIATKLAQANDLATQGKLQSEIAR
Ga0318497_102250261	3300031805	Soil	MQAAMAKRKKHSRAEMATKLAQANELATQGKLQSEIARRLGVSV
Ga0318497_106156961	3300031805	Soil	MQASIAKRKRHTRLEIATKLAQANELATQGKLQSDIARTLGVSV
Ga0318567_101857441	3300031821	Soil	MAKKKRHSRVEIASKLAQANDLATQGKLQSEIART
Ga0318499_100718501	3300031832	Soil	MAKKKRHSGAEIATKLAQANDLARRGRLQSEIART
Ga0310917_100860981	3300031833	Soil	MQAKKRRHSRAEIATKLAQANELATRGKLQSDIAR
Ga0318495_102758011	3300031860	Soil	MQAAMAKRKKHSRAEMATKLAQANELATQGKLQSEIARR
Ga0318495_104405052	3300031860	Soil	MAKKTRYSRAEIATKLAQANELATQGKLQSEIARTLGVSVM
Ga0306919_100353231	3300031879	Soil	MQAAMAKRKRHSRVEIATKLAQANDLATQGKLQSEIARTL
Ga0306919_109914801	3300031879	Soil	MPKKKRHSRVEIATKLAQANDLATQGKLQREIARSLGV
Ga0306925_102221101	3300031890	Soil	MQAAMPKRKRHSRLEIATKLAQADELATQGKLQSEIAR
Ga0306925_108417053	3300031890	Soil	MQAVMAKKKKHSRVEIAAKLAQANDLATQGKLQSEIARTL
Ga0306925_115922341	3300031890	Soil	MAKKKRHSRVEIASKLAQANDLAAQGKLQTEIART
Ga0318522_100876621	3300031894	Soil	MAKKKRHSRVEIATKLAQANGLATQGKLQSDIARTLG
Ga0318522_104311761	3300031894	Soil	MAKKKRHSRVEIASKLAEANDLVTQGKPHSEIARALGVSVMT
Ga0318551_104907631	3300031896	Soil	MAKRKKHSRAEIASKVAHANELATQGKLQSEIARALGVS
Ga0318520_100519711	3300031897	Soil	MRAVMAKKKRHSRVEIATKLAQANDLATQGKLQSEIARTLG
Ga0306921_111468722	3300031912	Soil	MTKKRKHSKAEIAAKLAEADDLVTQGKLQSEIARALGVS
Ga0310912_102946572	3300031941	Soil	MKGRMQTTMAKKKRHSRVEIASKLAQANDLATQGKLQSEI
Ga0310916_101449611	3300031942	Soil	MAKKRRHSRAEIATKLAQANELATRGKLQSEIARTLG
Ga0310913_111779902	3300031945	Soil	MAKKKKHSRVEIASKLAQANDLATQGKLQSEIARTLG
Ga0310910_102926273	3300031946	Soil	MKGRMQTTMAKKKRHSRVEIASKLAQANDLATQGKLQSEIARTLGV
Ga0306926_102876301	3300031954	Soil	MQAAMTQKKRHSTVEIATKLAQANDLATQGKLQSEIAHT
Ga0306926_115629772	3300031954	Soil	MQAKKRRHSRAEIATKLAQANELATRGKLQSDIARTLG
Ga0318530_103818821	3300031959	Soil	MAGLKRHSRVEVATKLAQANDLARQGKLQSEIARTLGV
Ga0318531_103422971	3300031981	Soil	MQAVMAKQKRHSRVEIATKLAQANDLATQGKVQSEI
Ga0318531_105902972	3300031981	Soil	MQAAMAKKKRHSRVEIATKLAQATDLATQGRSQREIAHMLG
Ga0306922_104989311	3300032001	Soil	MNMKGRMQTAMAKKKRHSRVEIASKLAQANDLATQGKLQSE
Ga0306922_117457421	3300032001	Soil	MQAAMPKRKRHSRLEIATKLAQADELATQGKLQSEIARTLG
Ga0306922_120117322	3300032001	Soil	MAKKRGHSRAEIATKLAQANELATRGKLQSEIARTLGV
Ga0318563_107951621	3300032009	Soil	MLVTAAGQAAMAGLKRHSRVEVATKLAQANDLAKQGKLESEIARTLGV
Ga0318507_103451131	3300032025	Soil	MAKKKRHSRAEIATKLAQANELVTQGKLQSEVARTLG
Ga0318559_101102013	3300032039	Soil	MAKKKRHSGAEIATKLAQANDLARRGRLQSEIARTLG
Ga0318559_101363813	3300032039	Soil	MQAAMAKRKKHSRAEMATKLAQANELATQGKLQSEV
Ga0318549_104267371	3300032041	Soil	MQAAVAKKRRHSRAEIATKLAQANGLARQGKLQSDIARTLGVSVM
Ga0318570_102508561	3300032054	Soil	MQAAMAKRKRHSRVEIATKLAQANDLATQGKLQSEIARTLG
Ga0318575_102441851	3300032055	Soil	MAKKKRHSRVEIASKLAQANDLATQGKLQSEIARTLGVS
Ga0318575_104531872	3300032055	Soil	MQAAMAKRKRHSRVEIATKLAQANDLATQGKLQSEIARTLD
Ga0318575_106552251	3300032055	Soil	MQAAMPKRKRHSRLEIATKLAQADELATQGKLQSEIARTLGV
Ga0318533_105407581	3300032059	Soil	MQAVMAKQKRHSRVEIATKLAQANDLATQGKVQSEIARRLGVS
Ga0318533_112068571	3300032059	Soil	MKMGGAKQAVMAKRKKHSRVEIATKLQQANDLAMQGKL
Ga0318505_100381051	3300032060	Soil	MAKKRRHSRAEIATKLAQANELATRGELQSDIARTLGVS
Ga0318510_102563192	3300032064	Soil	MAKKKRHSRVEIASKLAQANDLVTQGKSQSEIART
Ga0318514_101067143	3300032066	Soil	MQAAMAKRKKHSRAEMATKLAQANELATQGKLQSEIARILG
Ga0318524_106388731	3300032067	Soil	MQAAMAKKRRHSRAEIATKLAQANELATRGKLQSD
Ga0318518_100976601	3300032090	Soil	MQAAMAKKRRHSRAEIATKLAQANELATRGKLQSDIARTL
Ga0318577_105306151	3300032091	Soil	MQAAMAKKRRHSRAEIATKLAQANELATRGKLQSEIARTLG
Ga0310914_100539361	3300033289	Soil	MLVTAAGQAAMAGLKRHSRVEVATKLAQANDLAKQGKLESEIARTLGVS
Ga0310914_103105641	3300033289	Soil	MQAAMANKRRHSRAEIATKLAQANELATRGKLQSDIARTL
Ga0310914_103555921	3300033289	Soil	MTKKRKHSKAEIAFKLAEADDLVTQGKLQSEIARELGV
Ga0310914_117127901	3300033289	Soil	MQAAIAKKKRHSRVEIATKLAQATDLATQGRSQREIAH
Ga0318519_102316821	3300033290	Soil	MKAAMAKKRRHSRAEIATKLAQANELATRGKLQSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F027452

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences