Metagenome / Metatranscriptome Family F028060

Basic Information
Family ID	F028060
Family Type	Metagenome / Metatranscriptome
Number of Sequences	192
Average Sequence Length	44 residues
Representative Sequence	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNA
Number of Associated Samples	105
Number of Associated Scaffolds	192

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.89 %
% of genes near scaffold ends (potentially truncated)	93.23 %
% of genes from short scaffolds (< 2000 bps)	93.75 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Unclassified (98.958 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (51.042 % of family members)
Environment Ontology (ENVO)	Unclassified (87.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (84.896 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.61% β-sheet: 0.00% Coil/Unstructured: 51.39%
Feature Viewer

Powered by Feature Viewer

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.96 %
All Organisms	root	All Organisms	1.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.96 %
Viruses	superkingdom	All Organisms → Viruses	1.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.04 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005335\|Ga0070666_10444612	Not Available	935	Open in IMG/M
3300005353\|Ga0070669_100561533	Not Available	953	Open in IMG/M
3300005617\|Ga0068859_100688376	Not Available	1113	Open in IMG/M
3300005617\|Ga0068859_100731013	Not Available	1079	Open in IMG/M
3300005719\|Ga0068861_102574486	Not Available	512	Open in IMG/M
3300005841\|Ga0068863_100885618	Not Available	892	Open in IMG/M
3300005841\|Ga0068863_101235086	Not Available	753	Open in IMG/M
3300005841\|Ga0068863_101639470	Not Available	652	Open in IMG/M
3300005841\|Ga0068863_101980813	Not Available	592	Open in IMG/M
3300005841\|Ga0068863_102343654	Not Available	543	Open in IMG/M
3300005841\|Ga0068863_102502209	Not Available	525	Open in IMG/M
3300005842\|Ga0068858_101315114	Not Available	711	Open in IMG/M
3300005842\|Ga0068858_101832021	Not Available	599	Open in IMG/M
3300005843\|Ga0068860_100969921	Not Available	867	Open in IMG/M
3300009981\|Ga0105133_102753	Not Available	990	Open in IMG/M
3300009989\|Ga0105131_114995	Not Available	713	Open in IMG/M
3300009990\|Ga0105132_102135	Not Available	1173	Open in IMG/M
3300009990\|Ga0105132_146063	Not Available	500	Open in IMG/M
3300009995\|Ga0105139_1041460	Not Available	783	Open in IMG/M
3300010263\|Ga0134105_1063762	Not Available	600	Open in IMG/M
3300010400\|Ga0134122_13347721	Not Available	504	Open in IMG/M
3300014968\|Ga0157379_11343223	Not Available	691	Open in IMG/M
3300015270\|Ga0182183_1035262	Not Available	687	Open in IMG/M
3300015270\|Ga0182183_1046911	Not Available	631	Open in IMG/M
3300015278\|Ga0182099_1041602	Not Available	593	Open in IMG/M
3300015280\|Ga0182100_1052391	Not Available	630	Open in IMG/M
3300015284\|Ga0182101_1065743	Not Available	583	Open in IMG/M
3300015284\|Ga0182101_1083442	Not Available	537	Open in IMG/M
3300015290\|Ga0182105_1025137	Not Available	815	Open in IMG/M
3300015290\|Ga0182105_1097785	Not Available	523	Open in IMG/M
3300015297\|Ga0182104_1046171	Not Available	703	Open in IMG/M
3300015297\|Ga0182104_1068380	Not Available	617	Open in IMG/M
3300015297\|Ga0182104_1083271	Not Available	576	Open in IMG/M
3300015310\|Ga0182162_1063018	Not Available	657	Open in IMG/M
3300015310\|Ga0182162_1107621	Not Available	540	Open in IMG/M
3300015311\|Ga0182182_1011903	Not Available	1074	Open in IMG/M
3300015312\|Ga0182168_1096657	Not Available	577	Open in IMG/M
3300015313\|Ga0182164_1115228	Not Available	539	Open in IMG/M
3300015315\|Ga0182120_1069403	Not Available	658	Open in IMG/M
3300015315\|Ga0182120_1077260	Not Available	632	Open in IMG/M
3300015315\|Ga0182120_1134497	Not Available	510	Open in IMG/M
3300015316\|Ga0182121_1074376	Not Available	661	Open in IMG/M
3300015316\|Ga0182121_1098361	Not Available	592	Open in IMG/M
3300015317\|Ga0182136_1029676	Not Available	877	Open in IMG/M
3300015317\|Ga0182136_1063949	Not Available	679	Open in IMG/M
3300015319\|Ga0182130_1066340	Not Available	656	Open in IMG/M
3300015324\|Ga0182134_1032677	Not Available	870	Open in IMG/M
3300015324\|Ga0182134_1070602	Not Available	669	Open in IMG/M
3300015325\|Ga0182148_1101134	Not Available	580	Open in IMG/M
3300015325\|Ga0182148_1129189	Not Available	528	Open in IMG/M
3300015326\|Ga0182166_1003211	Not Available	1589	Open in IMG/M
3300015326\|Ga0182166_1087750	Not Available	610	Open in IMG/M
3300015326\|Ga0182166_1126091	Not Available	532	Open in IMG/M
3300015326\|Ga0182166_1137657	Not Available	514	Open in IMG/M
3300015326\|Ga0182166_1139029	Not Available	511	Open in IMG/M
3300015328\|Ga0182153_1040773	Not Available	816	Open in IMG/M
3300015328\|Ga0182153_1119698	Not Available	555	Open in IMG/M
3300015328\|Ga0182153_1143314	Not Available	516	Open in IMG/M
3300015329\|Ga0182135_1080006	Not Available	652	Open in IMG/M
3300015329\|Ga0182135_1086454	Not Available	633	Open in IMG/M
3300015329\|Ga0182135_1109113	Not Available	579	Open in IMG/M
3300015330\|Ga0182152_1083793	Not Available	642	Open in IMG/M
3300015332\|Ga0182117_1054350	Not Available	799	Open in IMG/M
3300015332\|Ga0182117_1142447	Not Available	543	Open in IMG/M
3300015333\|Ga0182147_1137647	Not Available	549	Open in IMG/M
3300015335\|Ga0182116_1021441	Not Available	1121	Open in IMG/M
3300015335\|Ga0182116_1117999	Not Available	605	Open in IMG/M
3300015335\|Ga0182116_1143888	Not Available	556	Open in IMG/M
3300015335\|Ga0182116_1171265	Not Available	513	Open in IMG/M
3300015338\|Ga0182137_1115667	Not Available	609	Open in IMG/M
3300015339\|Ga0182149_1137201	Not Available	556	Open in IMG/M
3300015339\|Ga0182149_1169415	Not Available	508	Open in IMG/M
3300015340\|Ga0182133_1126152	Not Available	604	Open in IMG/M
3300015340\|Ga0182133_1155137	Not Available	553	Open in IMG/M
3300015348\|Ga0182115_1116013	Not Available	848	Open in IMG/M
3300015348\|Ga0182115_1239541	Not Available	578	Open in IMG/M
3300015350\|Ga0182163_1128690	Not Available	781	Open in IMG/M
3300015350\|Ga0182163_1152146	Not Available	719	Open in IMG/M
3300015350\|Ga0182163_1244610	Not Available	562	Open in IMG/M
3300015350\|Ga0182163_1289282	Not Available	513	Open in IMG/M
3300015352\|Ga0182169_1024210	Not Available	1637	Open in IMG/M
3300015352\|Ga0182169_1142170	Not Available	781	Open in IMG/M
3300015353\|Ga0182179_1140605	Not Available	748	Open in IMG/M
3300015354\|Ga0182167_1193535	Not Available	745	Open in IMG/M
3300017408\|Ga0182197_1149714	Not Available	505	Open in IMG/M
3300017412\|Ga0182199_1020051	Not Available	1148	Open in IMG/M
3300017412\|Ga0182199_1087440	Not Available	699	Open in IMG/M
3300017412\|Ga0182199_1147845	Not Available	573	Open in IMG/M
3300017414\|Ga0182195_1139961	Not Available	607	Open in IMG/M
3300017421\|Ga0182213_1211156	Not Available	554	Open in IMG/M
3300017422\|Ga0182201_1025550	Not Available	893	Open in IMG/M
3300017422\|Ga0182201_1055588	Not Available	698	Open in IMG/M
3300017435\|Ga0182194_1018267	Not Available	1098	Open in IMG/M
3300017435\|Ga0182194_1061397	Not Available	707	Open in IMG/M
3300017439\|Ga0182200_1051197	Not Available	752	Open in IMG/M
3300017439\|Ga0182200_1101058	Not Available	598	Open in IMG/M
3300017440\|Ga0182214_1126177	Not Available	558	Open in IMG/M
3300017445\|Ga0182198_1017236	Not Available	1196	Open in IMG/M
3300017445\|Ga0182198_1020371	Not Available	1137	Open in IMG/M
3300017445\|Ga0182198_1031160	Not Available	994	Open in IMG/M
3300017445\|Ga0182198_1058725	Not Available	801	Open in IMG/M
3300017445\|Ga0182198_1172948	Not Available	536	Open in IMG/M
3300017445\|Ga0182198_1203134	Not Available	502	Open in IMG/M
3300017446\|Ga0182217_1077750	Not Available	775	Open in IMG/M
3300017693\|Ga0182216_1145984	Not Available	598	Open in IMG/M
3300017693\|Ga0182216_1192214	Not Available	535	Open in IMG/M
3300017693\|Ga0182216_1198054	Not Available	528	Open in IMG/M
3300017694\|Ga0182211_1132097	Not Available	591	Open in IMG/M
3300017694\|Ga0182211_1132636	Not Available	590	Open in IMG/M
3300017694\|Ga0182211_1176936	Not Available	510	Open in IMG/M
3300020023\|Ga0182178_1002423	Not Available	1058	Open in IMG/M
3300020033\|Ga0182146_105962	Not Available	526	Open in IMG/M
3300025903\|Ga0207680_10405110	Not Available	964	Open in IMG/M
3300025903\|Ga0207680_10504177	Not Available	862	Open in IMG/M
3300025918\|Ga0207662_11095197	Not Available	566	Open in IMG/M
3300025925\|Ga0207650_11910089	Not Available	501	Open in IMG/M
3300025972\|Ga0207668_11580424	Not Available	592	Open in IMG/M
3300026088\|Ga0207641_12108762	Not Available	564	Open in IMG/M
3300026095\|Ga0207676_10576480	Not Available	1078	Open in IMG/M
3300028049\|Ga0268322_1004840	Not Available	1051	Open in IMG/M
3300028050\|Ga0268328_1020778	Not Available	773	Open in IMG/M
3300028050\|Ga0268328_1033862	Not Available	659	Open in IMG/M
3300028050\|Ga0268328_1043582	Not Available	604	Open in IMG/M
3300028053\|Ga0268346_1013039	Not Available	737	Open in IMG/M
3300028053\|Ga0268346_1027048	Not Available	591	Open in IMG/M
3300028054\|Ga0268306_1003507	Not Available	1010	Open in IMG/M
3300028054\|Ga0268306_1010345	Not Available	739	Open in IMG/M
3300028054\|Ga0268306_1026521	Not Available	552	Open in IMG/M
3300028055\|Ga0268338_1000377	Not Available	1865	Open in IMG/M
3300028055\|Ga0268338_1005160	Not Available	943	Open in IMG/M
3300028055\|Ga0268338_1031546	Not Available	563	Open in IMG/M
3300028056\|Ga0268330_1002214	Not Available	1442	Open in IMG/M
3300028056\|Ga0268330_1011478	Not Available	891	Open in IMG/M
3300028056\|Ga0268330_1043179	Not Available	576	Open in IMG/M
3300028056\|Ga0268330_1049426	Not Available	549	Open in IMG/M
3300028057\|Ga0268352_1016215	Not Available	775	Open in IMG/M
3300028057\|Ga0268352_1025421	Not Available	640	Open in IMG/M
3300028058\|Ga0268332_1008977	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300028058\|Ga0268332_1019722	Not Available	813	Open in IMG/M
3300028058\|Ga0268332_1040255	Not Available	645	Open in IMG/M
3300028058\|Ga0268332_1046461	Not Available	614	Open in IMG/M
3300028058\|Ga0268332_1048338	Not Available	605	Open in IMG/M
3300028061\|Ga0268314_1006233	Not Available	1036	Open in IMG/M
3300028062\|Ga0268342_1011158	Not Available	792	Open in IMG/M
3300028062\|Ga0268342_1013785	Not Available	743	Open in IMG/M
3300028062\|Ga0268342_1039267	Not Available	527	Open in IMG/M
3300028062\|Ga0268342_1042548	Not Available	513	Open in IMG/M
3300028064\|Ga0268340_1021557	Not Available	814	Open in IMG/M
3300028139\|Ga0268355_1008897	Not Available	636	Open in IMG/M
3300028140\|Ga0268334_1014136	Not Available	558	Open in IMG/M
3300028143\|Ga0268348_1005813	Not Available	797	Open in IMG/M
3300028143\|Ga0268348_1023761	Not Available	519	Open in IMG/M
3300028144\|Ga0268345_1021184	Not Available	558	Open in IMG/M
3300028150\|Ga0268343_1011968	Not Available	599	Open in IMG/M
3300028151\|Ga0268308_1015624	Not Available	646	Open in IMG/M
3300028153\|Ga0268320_1022168	Not Available	554	Open in IMG/M
3300028153\|Ga0268320_1024157	Not Available	540	Open in IMG/M
3300028154\|Ga0268341_1031744	Not Available	504	Open in IMG/M
3300028248\|Ga0268312_1038070	Not Available	503	Open in IMG/M
3300028251\|Ga0268324_1019169	Not Available	555	Open in IMG/M
3300028253\|Ga0268316_1005528	Not Available	781	Open in IMG/M
3300028262\|Ga0268310_1016454	Not Available	736	Open in IMG/M
3300028381\|Ga0268264_11747093	Not Available	632	Open in IMG/M
3300028464\|Ga0268302_102139	Not Available	807	Open in IMG/M
3300028464\|Ga0268302_104479	Not Available	628	Open in IMG/M
3300028468\|Ga0268317_1002144	Not Available	852	Open in IMG/M
3300028469\|Ga0268337_1001498	Not Available	1057	Open in IMG/M
3300028470\|Ga0268307_1006832	Not Available	740	Open in IMG/M
3300028472\|Ga0268315_1007535	Not Available	746	Open in IMG/M
3300028472\|Ga0268315_1022866	Not Available	535	Open in IMG/M
3300028475\|Ga0268327_1014760	Not Available	607	Open in IMG/M
3300028477\|Ga0268309_1000841	Not Available	1224	Open in IMG/M
3300028523\|Ga0268313_1000567	All Organisms → Viruses → Predicted Viral	1398	Open in IMG/M
3300028523\|Ga0268313_1014094	Not Available	562	Open in IMG/M
3300028526\|Ga0268339_1020532	Not Available	508	Open in IMG/M
3300028527\|Ga0268335_1015512	Not Available	534	Open in IMG/M
3300028529\|Ga0268311_1029388	Not Available	505	Open in IMG/M
3300032465\|Ga0214493_1168162	Not Available	502	Open in IMG/M
3300032548\|Ga0214483_1064860	Not Available	607	Open in IMG/M
3300033523\|Ga0314768_1341229	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	98.44%
Environmental	Environmental	1.04%
Engineered	Engineered	0.52%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	98.44%
Terrestrial	Environmental → Terrestrial	1.04%
Bioreactor	Engineered → Bioreactor	0.52%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	84.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.65%
Unclassified	Host-Associated → Plants → Unclassified	2.60%
Soil	Environmental → Terrestrial → Soil	1.04%
Unclassified	Engineered → Bioreactor → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	84.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	2.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.52%
Loam	Environmental → Terrestrial → Soil → Loam	0.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.52%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	84.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	2.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.52%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	51.04%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	33.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.12%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	2.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.52%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	0.52%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010263	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 16_60_3.3_214_A3 metaG	Engineered	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017446	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300020033	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12JUL2016_LD2 MG	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028055	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028057	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028062	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028139	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028140	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028141	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028144	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028150	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028253	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028464	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028468	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028469	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028470	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028475	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028477	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028526	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028527	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028529	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032467	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032548	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033523	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070666_104446121	3300005335	Switchgrass Rhizosphere	MEWVGCIRCEKIQNDFMAQTCALIAPVQPVLQRVSCSNETLPNAPKHYET
Ga0070669_1005615331	3300005353	Switchgrass Rhizosphere	MEWVGCIRYEKFQNDFMTQTCALIAPVQPVLQRVLCSNETLPNAPK
Ga0068859_1006883761	3300005617	Switchgrass Rhizosphere	MGLIGCVRGEKFQNDFMAQTSALIALVQPVLHRVS
Ga0068859_1007310132	3300005617	Switchgrass Rhizosphere	MKWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLP
Ga0068861_1025744861	3300005719	Switchgrass Rhizosphere	MEWVGSIRCEKFQNDFMAQTCALIAPVQPVLHRVSCSNET
Ga0068863_1008856181	3300005841	Switchgrass Rhizosphere	MEWVWCIRCVKFQNDFMTQTCALIAPVQPVLQRVLCSNETLPNAPKYYE
Ga0068863_1012350861	3300005841	Switchgrass Rhizosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNE
Ga0068863_1016394702	3300005841	Switchgrass Rhizosphere	MECVGCVLCEKFYNEFMAETCALIAPVQPVMHRVSCSNETLPNAPKHYE
Ga0068863_1019808131	3300005841	Switchgrass Rhizosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPVLHRVSCSNETLPNAPKHYEM
Ga0068863_1023436542	3300005841	Switchgrass Rhizosphere	MEWVGCIRCAKFQNDFMAQTCALIALVQPVLQRVSCSNEILPNAPKHYETHTNMS
Ga0068863_1025022091	3300005841	Switchgrass Rhizosphere	MEWVGCIRGEKFQNDFMAQTCALIALVQPVLHRVSCSNE
Ga0068858_1013151141	3300005842	Switchgrass Rhizosphere	MEWVRRVRFEKFKNDFMAQTCALIAPVQPVLQRVS
Ga0068858_1018320211	3300005842	Switchgrass Rhizosphere	MESIGCIRGEKFPNDFHAQTCALIAPVQPVLYRVSCSNETLPNAPK
Ga0068860_1009699212	3300005843	Switchgrass Rhizosphere	MEWVGCIRCEKFQNDFMAQTCALITPVQPVLQRVTCSNE
Ga0105133_1027531	3300009981	Switchgrass Associated	MEWVGCIRCEKFQNDFMAQTCALIAPVQPILHRVSCSNETLPNGPKH
Ga0105131_1149952	3300009989	Switchgrass Associated	GCIRCEKFQNDFMTQTCALIAPVQPVLQRVSCSNETLPNAPK*
Ga0105132_1021352	3300009990	Switchgrass Associated	MESVGCIRGEKFQNDFLAQTCALIAPVQPVLYRVSCSNETLPNAP
Ga0105132_1460631	3300009990	Switchgrass Associated	MGWIGCFRCQIFQNDLMAQTCALIALVQPVLQRVL
Ga0105139_10414601	3300009995	Switchgrass Associated	MVWVRCFRCEKFQNDFMAQTCALIAPVQPVLQRDSCSNETLPNAPKHYETHQNTSLW
Ga0134105_10637621	3300010263	Switchgrass Degrading	MEWVRCIRCEKFQNDFIAQTCALIAPVQPVLQRISCSYEKLPNAPKHYETHTNMSL
Ga0134122_133477211	3300010400	Terrestrial Soil	MEWVGCIRCEKFQNDFMAQTCPLIAPVQPVLQRLSSSNETLPNAPKHYETHQNMSLGS
Ga0157379_113432231	3300014968	Switchgrass Rhizosphere	MEWVGCIRCEKFQNDFMAQTCALITPVQPVLQRVSCNNETL
Ga0182183_10352622	3300015270	Switchgrass Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPVLHRVSCSNETLPNA
Ga0182183_10469111	3300015270	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNAP
Ga0182099_10416021	3300015278	Switchgrass Phyllosphere	MEWVGCILCDKFQNDIMAQTCALIAPVQLILQRVSCSNETLPNAPKHYETHQNMSLG
Ga0182100_10523911	3300015280	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDIMAQTSALIAPVQPVLQRVSCSNETLPNA
Ga0182101_10657431	3300015284	Switchgrass Phyllosphere	MVWVRCFRCEKFQNDFMAQTCALIAPVQPVLQRDSCSNETLPNAPVQFIL
Ga0182101_10834421	3300015284	Switchgrass Phyllosphere	MEWVGCIHCEKLQNDFMAQTCALIAPIQPVLQRVSCS
Ga0182105_10251371	3300015290	Switchgrass Phyllosphere	MGWVGSVRCEKFQNDFMAQTCALIAHVQPVLHRVSCSNETLPNAPKHYEMH
Ga0182105_10977851	3300015290	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNAH
Ga0182104_10461711	3300015297	Switchgrass Phyllosphere	MMWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPKAPKHYETHQNMSLGSNG
Ga0182104_10683802	3300015297	Switchgrass Phyllosphere	MEWVRCVRCEKFKNDFMAQTCALIAPVQLVLQRVSCSNETLPNAPKH
Ga0182104_10832711	3300015297	Switchgrass Phyllosphere	MGWISCVRCEKFQNDFMAQTCTLIAPVQPVLQRVLCSNETLPNAPKHYE
Ga0182162_10630181	3300015310	Switchgrass Phyllosphere	MEWVRCIRCEKVKTDIMAQTCALIATVQPVLQRVSCSNEILPNAP
Ga0182162_11076211	3300015310	Switchgrass Phyllosphere	MEWVGSIRCEKFQNDFMAQTCALIAPVQPVLHRVSCSNETLPNAPKHYE
Ga0182182_10119032	3300015311	Switchgrass Phyllosphere	MSIGPMEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSSSNE
Ga0182168_10966571	3300015312	Switchgrass Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPVLHRVSCSNETLPNGPKHYEMHQN
Ga0182164_11152281	3300015313	Switchgrass Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPVLHRVSCSNE
Ga0182120_10694031	3300015315	Switchgrass Phyllosphere	MEWVRCIRCEKVKNDFMAQTCALIATVQPVLQRVSCSNEILPN
Ga0182120_10772601	3300015315	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTFALIAPVQPILHQASCINETI
Ga0182120_11344971	3300015315	Switchgrass Phyllosphere	MEWVGCGRCEKFQNDFMAQTYALIAPVQPVLQQVSCSNETLPN
Ga0182121_10743761	3300015316	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNA
Ga0182121_10983611	3300015316	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMTQTCALIAPVQPILHRVLCSNETLPNGPKHYETHQNMS
Ga0182136_10296761	3300015317	Switchgrass Phyllosphere	EWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVS*
Ga0182136_10639491	3300015317	Switchgrass Phyllosphere	MEWVGGIRCEKYQNDFMAQTCALIAPVQPVLHRVSCSNETLPNA
Ga0182130_10663401	3300015319	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLHRVSCSNETLPN
Ga0182134_10326771	3300015324	Switchgrass Phyllosphere	MEWIVCVHCEKFQDDFMAQTCALIAPVQPILQRVSCSN
Ga0182134_10706021	3300015324	Switchgrass Phyllosphere	MEWVGSIRCEKVQNDFMAQTCALIAPVQPVLQRVSCSNETLPNASKH
Ga0182148_11011341	3300015325	Switchgrass Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPVLHRVS
Ga0182148_11291891	3300015325	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMTQTCALIAPVQPILHRVL
Ga0182166_10032111	3300015326	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNAPKHYET
Ga0182166_10342802	3300015326	Switchgrass Phyllosphere	MEWVGCIHCEKFQIDFMAQTCALIAPVQPILHRVSRSNET
Ga0182166_10877501	3300015326	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALITPVQPVLQRVTCS
Ga0182166_11260911	3300015326	Switchgrass Phyllosphere	MEWVRCVPCEKFKNDFMAQTCALIAPVHPVWHQASCINETIQNAHKHYETQQCM
Ga0182166_11376571	3300015326	Switchgrass Phyllosphere	MEWVGCIRGEKFQNDFLAQTCALIAPVQPVLYRVSCSNETLPN
Ga0182166_11390291	3300015326	Switchgrass Phyllosphere	MEWVGCIRFEKFQNDFMAQTCALIAPVKPVLHRVSCSNETLPNAPKYYETHQN
Ga0182153_10407731	3300015328	Switchgrass Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIAPVQPVLYRVSCSNETLPNAPKHYET
Ga0182153_10680731	3300015328	Switchgrass Phyllosphere	MEWAGCIHYEKFENDFMAQTCALIAPVQPVLHRVSCS
Ga0182153_11196981	3300015328	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCPIIAPVQPVLQRVSCSNETLLNASKQYE
Ga0182153_11433141	3300015328	Switchgrass Phyllosphere	MEWVGCIRCEKFQNEFMAQTFALFAPVHPILHQASCINETIQ
Ga0182135_10105351	3300015329	Switchgrass Phyllosphere	MEWVGCIHCEKFQIDFMAQTCALIAPVQPILHRVSRSNE
Ga0182135_10800061	3300015329	Switchgrass Phyllosphere	MGGIGCVRFEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLP
Ga0182135_10864541	3300015329	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSC
Ga0182135_11091131	3300015329	Switchgrass Phyllosphere	MEWAGCIRCEKFQNDVMAQTCALIAPVQPVLHRVSCSNEILPNAPK
Ga0182152_10837931	3300015330	Switchgrass Phyllosphere	MEWVRCVPCEIFKNDFMAQTCALIAPVQPVLQRVSCSNETLPNAPKHYE
Ga0182117_10543501	3300015332	Switchgrass Phyllosphere	MEWVGCIRYEKFQNDFMAQTCALSAPVQPVLQRVSCSNETLPNAP
Ga0182117_11424471	3300015332	Switchgrass Phyllosphere	MEWVGCFRCEKFQNDFMAQTCALIAPVQPVLKRVSCSNET
Ga0182147_11376471	3300015333	Switchgrass Phyllosphere	MEWVRCIRCKKFQNDFMAQTCALIAPVQHILQRVSCSNETLPNAPKHYETHQNMSLG
Ga0182116_10214412	3300015335	Switchgrass Phyllosphere	MEWVGCIRSEKIKNDFMAQTCALIAPVQPVLQRVSCSNETLPN
Ga0182116_11179991	3300015335	Switchgrass Phyllosphere	MEWVGCIHGEKFQNDFMAQTCAFIAPVQPVLHRVSGCKETLPNAPTYYET
Ga0182116_11438881	3300015335	Switchgrass Phyllosphere	MGWISCVRCEKFQNDFMAQTCVLIAPVQPVLQRVSCSNETLPNAPKHYETHT
Ga0182116_11712651	3300015335	Switchgrass Phyllosphere	MEWFGSIRCEKFQNNFMAQTCTLIAPVQPVLQRDSCSNE
Ga0182137_11156671	3300015338	Switchgrass Phyllosphere	MESVGCIRCEEFQNDFMVQTCTIIAPVQPVLQRVSCSNETLPNEPKHYE
Ga0182149_11372011	3300015339	Switchgrass Phyllosphere	MERIGCIRSEKFQNDFMTQTCALIAPVQPVLHRVSCSNETLPNA
Ga0182149_11694151	3300015339	Switchgrass Phyllosphere	MERVGCIRGEKFQNDIMAQTCALIAPVQPILYRVSCSNETLPNAPKHYETH
Ga0182133_11261522	3300015340	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALITPVQPVLQRVSCSNETL
Ga0182133_11551372	3300015340	Switchgrass Phyllosphere	MEWVVCVLCEKFHNEFMAQTCALIAPVQPVLQRVSCSNEILPNAPKHYETH
Ga0182115_11160132	3300015348	Switchgrass Phyllosphere	MEWVRCIRCEKFQNDFMAQTCALIAPIQPVLHRVSCSNETLPNA
Ga0182115_12395412	3300015348	Switchgrass Phyllosphere	MEWVVCVLCEKFHNEFMAQTCALIAPVQPVLQRVSCS
Ga0182163_11286902	3300015350	Switchgrass Phyllosphere	CEKFQNDFMAQTCALIAPVQPILHPVSGCNETLQNAP*
Ga0182163_11521461	3300015350	Switchgrass Phyllosphere	MERIGCIRCEKFQNDFMTQTFALIAPVHHVLHQASCINETIQNAPKHYETQ
Ga0182163_12446101	3300015350	Switchgrass Phyllosphere	MEWVGCIRSEKFQNDFMAQTCALIAPVQPVLQRVSSSNETLPNAP
Ga0182163_12892821	3300015350	Switchgrass Phyllosphere	MEWVGCIRCEKFQNEFMAQTFALIAPVHPVLHQASCINETI
Ga0182169_10242102	3300015352	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDLMTQTCALIAPVQPVLHRVSCSNETMPNAP
Ga0182169_11421701	3300015352	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMTQTCALIAPVQPILHRVLCSNE
Ga0182179_11406051	3300015353	Switchgrass Phyllosphere	MGWISSVRCEKFQNDFMAQTCVLIAPVQPILQRVS
Ga0182167_11935351	3300015354	Switchgrass Phyllosphere	MEWVGSIRCEKFQNYFMAQTCALIAPVQPILQRVSCSNETLP
Ga0182197_11497141	3300017408	Switchgrass Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIAPVQPILYRVSCS
Ga0182199_10200511	3300017412	Switchgrass Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIAPVQPILYRVSCSNETLPNAPKHYETHQNM
Ga0182199_10874401	3300017412	Switchgrass Phyllosphere	MGWIVCVHCEKFQDDFMAQTCALIAPVQPILQRVSCSNETLPNASKHYEAH
Ga0182199_11478451	3300017412	Switchgrass Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPVLHRVSCSNETLPNAPKHY
Ga0182195_11399611	3300017414	Switchgrass Phyllosphere	MEWVGCICCEKFQNDFMAQTCALIAPVQPVLQRVS
Ga0182213_12111561	3300017421	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNAHKH
Ga0182201_10255502	3300017422	Switchgrass Phyllosphere	MEWVRCVRCEKFKNDFMAQTCALIAPVQPVLQRVLCSNETLPNAPKH
Ga0182201_10555881	3300017422	Switchgrass Phyllosphere	MESVGCIRCEEFQNDFMVQTCTIIAPVQPVLQRVSCSNETLPN
Ga0182194_10182671	3300017435	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNATKHY
Ga0182194_10613971	3300017435	Switchgrass Phyllosphere	MEWVGCIRCEKFHNKFMAQTCALIAPVQPFVHRVSCSNETLPNAPKN
Ga0182200_10511971	3300017439	Switchgrass Phyllosphere	MESVGCIRCEEFQNDFMVQTCTIIAPVQPVLQRVSCSNETLPNEPK
Ga0182200_11010581	3300017439	Switchgrass Phyllosphere	MEWVGCIRCEKLQNNFMAQTCALIAPVQPVLQRVS
Ga0182214_11261771	3300017440	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLHRVSCSNETLPNAPK
Ga0182198_10172361	3300017445	Switchgrass Phyllosphere	MESVGCIRCEEFQNDFMVQTCTIIAPVQPVLQRVSCSNETLPNEPKHYETHQNIC
Ga0182198_10203711	3300017445	Switchgrass Phyllosphere	MEWVRCIRCEKFQNDFMAQTCALIAPVQPILQQVLCSNETL
Ga0182198_10311602	3300017445	Switchgrass Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPILRRVSCSNETLPNAPKH
Ga0182198_10587251	3300017445	Switchgrass Phyllosphere	MEWVRCIRCKKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNAPKHY
Ga0182198_10943151	3300017445	Switchgrass Phyllosphere	MGWIECVRCEKFQCDLMAQTCPLIAPAQPILQRVL
Ga0182198_11729481	3300017445	Switchgrass Phyllosphere	MEWVGCIRREKFQNNFMAQTCALIAPVQPILHRLPCSIETLPNALKHE
Ga0182198_12031341	3300017445	Switchgrass Phyllosphere	MEWVGCIRGENFQNDFMAQTCALIAPVQPILYRVSC
Ga0182217_10777501	3300017446	Switchgrass Phyllosphere	MEWVGCIRCEKFHNKFMAQTCALIAPVQPFVHRVSCSNETLPNAPK
Ga0182216_11459841	3300017693	Switchgrass Phyllosphere	MGGIGCVRCEKFQNDFMAQTCALIAPVQTVLQRVSCSNETLPNAPK
Ga0182216_11922141	3300017693	Switchgrass Phyllosphere	MESVRCIRGEKFQNDFLAQTSALIAPVQPILYRVSCSNETLPNA
Ga0182216_11980541	3300017693	Switchgrass Phyllosphere	MECVRCIRCEKFQNDFMTQTCALIATVQPVLQRVSCSNETLPNAPKHYEMHQNMSLW
Ga0182211_11320971	3300017694	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFIAQTCALIAPVQPALHRVLC
Ga0182211_11326361	3300017694	Switchgrass Phyllosphere	MESVGCIRCEEFQNDFMVQTCTIIAPVQPVLQRVSCSNETLPNE
Ga0182211_11769361	3300017694	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIALVQPVLQRVSCSNEILPNAPKHYE
Ga0182178_10024231	3300020023	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIASVQPVLQRVSCSNET
Ga0182146_1059621	3300020033	Switchgrass Phyllosphere	MEWVGSICGEKFQNDFMAQICALIAPVQPVLYRVS
Ga0207680_104051102	3300025903	Switchgrass Rhizosphere	MEWVRCVRCEKFKNDFMAQTCALIAPVQPVLHRVSCINETLPNAPKHY
Ga0207680_105041771	3300025903	Switchgrass Rhizosphere	MESVGCIRCEEFQNDFMVQTCTIIAPVQPVLQRVSCSNETLPNEPKHYETHQN
Ga0207662_110951971	3300025918	Switchgrass Rhizosphere	MEWVRCIRCEKFQNDFMAQTCALIAPVQPILQQVL
Ga0207650_119100891	3300025925	Switchgrass Rhizosphere	MEWVGCILCDKFQNDFMAQTCALIAPVQLVLQRVSCSNETLPNAPKHYET
Ga0207668_115804241	3300025972	Switchgrass Rhizosphere	MEWVRCIRCEKFQNDFMAQTCALIAPVQHILQRVSCSNETLPNAP
Ga0207641_121087621	3300026088	Switchgrass Rhizosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNAPKH
Ga0207676_105764802	3300026095	Switchgrass Rhizosphere	PMECVGCIRCEKFQNDFMAQTCALIALVQPVLQRVSCSNEILPNAPKHYEMH
Ga0268322_10048401	3300028049	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNATKHYET
Ga0268328_10207781	3300028050	Phyllosphere	MESFRCIRGEKLQNDFMARTSALIAQVHPVLYRVSCSNETLPNAPKYYETHQ
Ga0268328_10338621	3300028050	Phyllosphere	MEWVRCIRCEKFQNDFMAQTCALIAPVQPVLQRDSCSNETLPNAPKHYE
Ga0268328_10435821	3300028050	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLP
Ga0268346_10130391	3300028053	Phyllosphere	MEWVGSIRCEKVQNDFMAQTCALIAPVQPVLQRVSCSNETL
Ga0268346_10270481	3300028053	Phyllosphere	MEWVGCIHCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNA
Ga0268306_10035071	3300028054	Phyllosphere	MGWISCVRCEKFQNDFMAQTCVLIATVLPVLQRVLCSIETLPNAPKHYETHTNM
Ga0268306_10103451	3300028054	Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIALVQPVLHRVSCSNETLPNAPKHY
Ga0268306_10265211	3300028054	Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIAPVEPVLYRVSCSNETLPNAPKHNK
Ga0268338_10003773	3300028055	Phyllosphere	MVWVRCFRCEKFQNDFMAQTCALIAPVQPVLQRDSCSNETL
Ga0268338_10051601	3300028055	Phyllosphere	MEWVGCIRCEKFQNDFIAQTCALIAPVQPALHRVL
Ga0268338_10315461	3300028055	Phyllosphere	MESVGCIRGEKFQNDFLAQTCALIAPVQPVLYRVSCSNETLPNAPKHYEMHQNMS
Ga0268330_10022141	3300028056	Phyllosphere	MEWVGCIRCEKFQNDFMAQTFALIAPVQPILHQAS
Ga0268330_10114781	3300028056	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNATKH
Ga0268330_10431791	3300028056	Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPVQPVLHRVSCSNETLP
Ga0268330_10494261	3300028056	Phyllosphere	MEGVTCVRCEKFKNDFMAQTCALIAPVQPVLQRVSCSNETL
Ga0268352_10162151	3300028057	Phyllosphere	MGLVGCICREKFQNEFMAQTCALIAHVQPILDRVSCSNETLPNAPK
Ga0268352_10254211	3300028057	Phyllosphere	MGWISCVRCEKFQNDFMAQTCVLIATVLPVLQRVLCSIETLPNAPKHYGTHTNM
Ga0268332_10089771	3300028058	Phyllosphere	MGWIGCVPCEKFQYDFMAQTCALNAPVYPVLPRVS
Ga0268332_10097901	3300028058	Phyllosphere	MEWVGCIHCEKFQIDFMEQICALIAPVHPILHRVSCSNETLPNAPKHYKT
Ga0268332_10197221	3300028058	Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIAPVQTVLYRVSCSNETLPN
Ga0268332_10402551	3300028058	Phyllosphere	MEWVGCIRCEIFQNDVMAQTCALIAPVQPVLRRVSCSNEIL
Ga0268332_10464611	3300028058	Phyllosphere	MEWVGCICCEKFQNDFMAQTCALIAPVQPVLQQVSCSNEKLPNA
Ga0268332_10483381	3300028058	Phyllosphere	MEWVRSIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNALKH
Ga0268314_10062331	3300028061	Phyllosphere	MEWVGCIRYKKFQNDFMAQTCALIAPVQPVLQQALCSYKTIQNASKHYE
Ga0268342_10111581	3300028062	Phyllosphere	MVWVRCFRCEKFQNDFMAQTCALIAPVQPVLQRDSCSNETLPNAP
Ga0268342_10137851	3300028062	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETL
Ga0268342_10147911	3300028062	Phyllosphere	MEWVGCIHCEKFQIDFMAQTCALIAPGQPILHRVWRS
Ga0268342_10392671	3300028062	Phyllosphere	MEWVRCIRCEKFQNDFMAQTCALIAPVQHILQRVSCSNETLPNAPK
Ga0268342_10425481	3300028062	Phyllosphere	MEWVGCIRCEKFQNDFMAQTYALIAIVQPVLQRVSCSNEILPN
Ga0268340_10215572	3300028064	Phyllosphere	MEWVGCIRCEKFQNDFMTQTCALIAPVQPILHRVLCSNETL
Ga0268355_10088971	3300028139	Phyllosphere	MKWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNET
Ga0268334_10141361	3300028140	Phyllosphere	MEWVRCIRCEKVKNDFMAQTCALIATVQPVLQRVSCSNEILPNA
Ga0268326_10077762	3300028141	Phyllosphere	MEWIGCVHCEKFRCDIVAQTCALIAPFQPVLHLALSINETLPNAPKHYETHQNR
Ga0268348_10058131	3300028143	Phyllosphere	MEWVGCIRCEKFQNDFMAQTFALIASVQPVLQRVSCSN
Ga0268348_10237611	3300028143	Phyllosphere	MEWVGSIRCEKFQNYFMAQTCALIAPVQTILQRVSCSNETLPSAPKHYETHQNMSLGSNG
Ga0268345_10211841	3300028144	Phyllosphere	CIRCEKFQNDFMAHTCALIAPVQPVLQRVSCSNET
Ga0268343_10119681	3300028150	Phyllosphere	MEWVGCICCEKFQNDFMAQTCALIAPVQPVLQRVSCSNEKLPN
Ga0268308_10156241	3300028151	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCGLIAPVQPVLHRVSCSNETLP
Ga0268320_10221681	3300028153	Phyllosphere	MEWVRYIRCKKFQNDFMAQTCALIAPVQPILQRVSCSA
Ga0268320_10241571	3300028153	Phyllosphere	MEWVGSIRYEKLQNDFMAQTCALIAPIQPVLHRVSCSNE
Ga0268341_10317441	3300028154	Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIAPVQPVLHRVSGSNETLPNAPKH
Ga0268312_10380701	3300028248	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSCSNETLPNATKHYETHKNLSLG
Ga0268324_10191691	3300028251	Phyllosphere	MEWVGCIRGEKFQNDFMAQTCALIAPVKPVLHRVSCSNETLP
Ga0268316_10055281	3300028253	Phyllosphere	MEWFGGIRCEKFQNDFMTQTCALIAPAQPNLHQVSCSNETLPNAPKHYETHQ
Ga0268310_10164541	3300028262	Phyllosphere	MGWIVCVHCEKFQDDFMAQTCALIAPVQPILQRVSCSNETLPNASKH
Ga0268264_117470931	3300028381	Switchgrass Rhizosphere	MEWVGCIRCEKFQNGFMAQTCALIALVQPVLQRVS
Ga0268302_1010101	3300028464	Phyllosphere	MEWVGCIHCEKFQIDFMAQTCALIAPVQPILHRVSCINET
Ga0268302_1021391	3300028464	Phyllosphere	MEWVECIRCEKFQNDFMAQTCALIAPVQPILQRVS
Ga0268302_1044791	3300028464	Phyllosphere	MECVRCIRCENFQNDFMAQTCALIATVQPVLQRVSCSNETLPNAPKHYEMHQNM
Ga0268317_10021441	3300028468	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQHVLQRVS
Ga0268337_10014981	3300028469	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQRVSSS
Ga0268307_10068321	3300028470	Phyllosphere	MEWVGCIRCEKFQNDFMTQTCALIAPVQPVLQRVSC
Ga0268307_10090571	3300028470	Phyllosphere	MEWVGCISCEKFQNDFMAQTCALIAPVQPILHRVSRSNETLPNAPKHYE
Ga0268315_10075351	3300028472	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALNAPVQPVLQRVSCSNETLPN
Ga0268315_10228661	3300028472	Phyllosphere	MEWVGCIHGEKFQNDFMAQTCALIALVQPVLHRVSCSNETLPNAPKHYERHQNMSLWSN
Ga0268327_10147601	3300028475	Phyllosphere	MEWVGCIRCEKFQNDIMAQTSALIAPVQPILHQVSCS
Ga0268309_10008411	3300028477	Phyllosphere	MEWVGCIRGEKFQNDIMAQTCALIALVQPVLYRVSCSNETLPNA
Ga0268313_10005671	3300028523	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLHRVSCSNETLPNAPEHYETHQNMSLW
Ga0268313_10140941	3300028523	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIAPVQPVLHRVLCSNETLPSAPK
Ga0268339_10205321	3300028526	Phyllosphere	MEWVGSICGEKFQNDFMAQFCALIAPVQPVLYRVS
Ga0268335_10017961	3300028527	Phyllosphere	MSIGPMEWVGCIRCEKFQNDFMAQTCALIAPVQPVLQLVS
Ga0268335_10155121	3300028527	Phyllosphere	MEWVGCIRCEKFQNDFMAQTCALIELVQPVLQRVSC
Ga0268311_10066141	3300028529	Phyllosphere	MEWVGCIHCEKFQIDFMAQTCALIAPVQPILHRVSRSNETLPNAPK
Ga0268311_10293882	3300028529	Phyllosphere	MGWIVCVRCKQFQCDFMAQTCALILPFQPTLHRVLCSDETIQNAPKHYKTHQNMSLR
Ga0214493_11681621	3300032465	Switchgrass Phyllosphere	MEWVGCIRCEKFQNDFMAQTCSLIAPVQPVLQRVSCSNETLPNATKH
Ga0214488_11147301	3300032467	Switchgrass Phyllosphere	EKFHNKFMAQTCALIAPVQPFVHRVSCSNETLPNAPKN
Ga0214483_10648601	3300032548	Switchgrass Phyllosphere	MEWVGCIRCENFQNDFMAQTCALIAPVQPILQQVLCSNETLPNAPKHYETHQN
Ga0314768_13412292	3300033523	Switchgrass Phyllosphere	MSLVPMGWIECVLCEKFRYDFMAQTCALIALVQPVLHRVDKC

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028060

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign