Metagenome / Metatranscriptome Family F028293

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F028293
Family Type	Metagenome / Metatranscriptome
Number of Sequences	192
Average Sequence Length	47 residues
Representative Sequence	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGR
Number of Associated Samples	149
Number of Associated Scaffolds	192

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.45 %
% of genes near scaffold ends (potentially truncated)	93.23 %
% of genes from short scaffolds (< 2000 bps)	90.10 %
Associated GOLD sequencing projects	143
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.875 % of family members)
Environment Ontology (ENVO)	Unclassified (29.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.729 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.99% β-sheet: 0.00% Coil/Unstructured: 63.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 192 Family Scaffolds
PF03576	Peptidase_S58	26.56
PF04392	ABC_sub_bind	2.08
PF02683	DsbD	1.04
PF07690	MFS_1	1.04
PF03807	F420_oxidored	1.04
PF03401	TctC	0.52
PF00106	adh_short	0.52
PF00390	malic	0.52
PF13458	Peripla_BP_6	0.52
PF12399	BCA_ABC_TP_C	0.52
PF07859	Abhydrolase_3	0.52
PF16576	HlyD_D23	0.52
PF01522	Polysacc_deac_1	0.52
PF00313	CSD	0.52
PF04828	GFA	0.52
PF13751	DDE_Tnp_1_6	0.52
PF13683	rve_3	0.52
PF00512	HisKA	0.52
PF01548	DEDD_Tnp_IS110	0.52
PF00126	HTH_1	0.52
PF01844	HNH	0.52

COG ID	Name	Functional Category	% Frequency in 192 Family Scaffolds
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	53.12
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.08
COG0281	Malic enzyme	Energy production and conversion [C]	0.52
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.52
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.52
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.52
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.52
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.23 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.56 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.52 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.52 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.52 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.52 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.04 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.52 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.52 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.52 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.04 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.52 %
Rugamonas brunnea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas brunnea	0.52 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.52 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.04 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.52 %
Rugamonas brunnea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas brunnea	0.52 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.52 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04X04ET	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
2070309004\|prs_FIHLEPW02PJ8N0	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
2170459011\|GI3SL7401BS00P	Not Available	524	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10104448	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10146352	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1098265	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10037496	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10053976	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1031911	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300001686\|C688J18823_10639300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	678	Open in IMG/M
3300002914\|JGI25617J43924_10182641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	699	Open in IMG/M
3300002917\|JGI25616J43925_10355845	Not Available	541	Open in IMG/M
3300003911\|JGI25405J52794_10046697	Not Available	923	Open in IMG/M
3300004281\|Ga0066397_10105693	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300004479\|Ga0062595_102412837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300004633\|Ga0066395_10735007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300005332\|Ga0066388_102609585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	920	Open in IMG/M
3300005332\|Ga0066388_106764265	Not Available	577	Open in IMG/M
3300005332\|Ga0066388_108343451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300005439\|Ga0070711_101376689	Not Available	613	Open in IMG/M
3300005446\|Ga0066686_10940325	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005471\|Ga0070698_101798369	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005536\|Ga0070697_100182426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas brunnea	1779	Open in IMG/M
3300005546\|Ga0070696_100279141	Not Available	1273	Open in IMG/M
3300005548\|Ga0070665_100162884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2232	Open in IMG/M
3300005557\|Ga0066704_10767369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300005557\|Ga0066704_10834203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300005559\|Ga0066700_10370638	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300005586\|Ga0066691_10313277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300005616\|Ga0068852_101823831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	630	Open in IMG/M
3300005713\|Ga0066905_100156163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1650	Open in IMG/M
3300005713\|Ga0066905_100570149	Not Available	953	Open in IMG/M
3300005713\|Ga0066905_100968376	Not Available	748	Open in IMG/M
3300005718\|Ga0068866_11294143	Not Available	529	Open in IMG/M
3300005764\|Ga0066903_106595016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	604	Open in IMG/M
3300005764\|Ga0066903_108050178	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005764\|Ga0066903_109091009	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300006028\|Ga0070717_10838090	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300006028\|Ga0070717_11435454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300006032\|Ga0066696_10120260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1606	Open in IMG/M
3300006038\|Ga0075365_10861028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300006172\|Ga0075018_10173587	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300006175\|Ga0070712_101651222	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300006573\|Ga0074055_11274624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	743	Open in IMG/M
3300006604\|Ga0074060_11481522	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300006791\|Ga0066653_10620276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300006794\|Ga0066658_10246603	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300006796\|Ga0066665_11685121	Not Available	502	Open in IMG/M
3300006800\|Ga0066660_11034656	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300007265\|Ga0099794_10082720	Not Available	1585	Open in IMG/M
3300009090\|Ga0099827_10609194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	942	Open in IMG/M
3300009143\|Ga0099792_10741188	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300009147\|Ga0114129_10891392	Not Available	1128	Open in IMG/M
3300009162\|Ga0075423_13099477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300009792\|Ga0126374_11398828	Not Available	570	Open in IMG/M
3300010046\|Ga0126384_10872742	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010046\|Ga0126384_12355923	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300010047\|Ga0126382_10618402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300010047\|Ga0126382_11508679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300010048\|Ga0126373_10710516	Not Available	1064	Open in IMG/M
3300010303\|Ga0134082_10099663	Not Available	1149	Open in IMG/M
3300010303\|Ga0134082_10135555	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300010326\|Ga0134065_10086568	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300010335\|Ga0134063_10480725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300010358\|Ga0126370_11286699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300010358\|Ga0126370_11360564	Not Available	668	Open in IMG/M
3300010359\|Ga0126376_10750560	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300010360\|Ga0126372_11189810	Not Available	786	Open in IMG/M
3300010360\|Ga0126372_13190109	Not Available	509	Open in IMG/M
3300010361\|Ga0126378_10581294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1235	Open in IMG/M
3300010362\|Ga0126377_13435826	Not Available	512	Open in IMG/M
3300010364\|Ga0134066_10376033	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010366\|Ga0126379_11585699	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300010366\|Ga0126379_12002305	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010366\|Ga0126379_13831738	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010376\|Ga0126381_100189935	All Organisms → cellular organisms → Bacteria → Proteobacteria	2737	Open in IMG/M
3300010376\|Ga0126381_101015607	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300010376\|Ga0126381_103075425	Not Available	661	Open in IMG/M
3300010376\|Ga0126381_104391925	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300010398\|Ga0126383_10531746	Not Available	1239	Open in IMG/M
3300010398\|Ga0126383_11334279	Not Available	807	Open in IMG/M
3300010398\|Ga0126383_12924245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	558	Open in IMG/M
3300012201\|Ga0137365_10670452	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012202\|Ga0137363_10304931	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300012204\|Ga0137374_10003110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	19514	Open in IMG/M
3300012354\|Ga0137366_11045618	Not Available	565	Open in IMG/M
3300012357\|Ga0137384_10342388	Not Available	1240	Open in IMG/M
3300012360\|Ga0137375_11284448	Not Available	554	Open in IMG/M
3300012361\|Ga0137360_10132978	Not Available	1950	Open in IMG/M
3300012362\|Ga0137361_11542920	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012532\|Ga0137373_10050570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3864	Open in IMG/M
3300012918\|Ga0137396_11058077	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012923\|Ga0137359_10151535	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300012971\|Ga0126369_10472312	Not Available	1307	Open in IMG/M
3300012971\|Ga0126369_11346712	Not Available	804	Open in IMG/M
3300012989\|Ga0164305_10237864	Not Available	1307	Open in IMG/M
3300013297\|Ga0157378_13267349	Not Available	504	Open in IMG/M
3300014150\|Ga0134081_10247920	Not Available	622	Open in IMG/M
3300015357\|Ga0134072_10337375	Not Available	574	Open in IMG/M
3300016270\|Ga0182036_10617997	Not Available	870	Open in IMG/M
3300016341\|Ga0182035_10452851	Not Available	1088	Open in IMG/M
3300016357\|Ga0182032_11008205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	711	Open in IMG/M
3300016371\|Ga0182034_11102110	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300016387\|Ga0182040_10248043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300016387\|Ga0182040_11096739	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300016404\|Ga0182037_10909051	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300016422\|Ga0182039_10285767	All Organisms → cellular organisms → Bacteria → Proteobacteria	1360	Open in IMG/M
3300016445\|Ga0182038_10748400	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300017657\|Ga0134074_1169086	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300017657\|Ga0134074_1180374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	745	Open in IMG/M
3300021168\|Ga0210406_10815412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300021363\|Ga0193699_10273165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300022533\|Ga0242662_10285192	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300025916\|Ga0207663_11037371	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300025922\|Ga0207646_10492266	Not Available	1105	Open in IMG/M
3300025922\|Ga0207646_11288965	Not Available	638	Open in IMG/M
3300026285\|Ga0209438_1177994	Not Available	561	Open in IMG/M
3300026310\|Ga0209239_1173685	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300026317\|Ga0209154_1224142	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300026319\|Ga0209647_1228745	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300026320\|Ga0209131_1363971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300026523\|Ga0209808_1198992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300026532\|Ga0209160_1123597	Not Available	1264	Open in IMG/M
3300027071\|Ga0209214_1032017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	695	Open in IMG/M
3300027181\|Ga0208997_1001830	Not Available	2358	Open in IMG/M
3300027548\|Ga0209523_1090375	Not Available	633	Open in IMG/M
3300027738\|Ga0208989_10010828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3117	Open in IMG/M
3300028536\|Ga0137415_10955977	Not Available	667	Open in IMG/M
3300028717\|Ga0307298_10088806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300028717\|Ga0307298_10229544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300028778\|Ga0307288_10079778	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300030962\|Ga0138297_1061353	Not Available	500	Open in IMG/M
3300031421\|Ga0308194_10139589	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031545\|Ga0318541_10284719	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031561\|Ga0318528_10176718	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300031564\|Ga0318573_10257042	Not Available	931	Open in IMG/M
3300031572\|Ga0318515_10427533	Not Available	708	Open in IMG/M
3300031679\|Ga0318561_10142767	Not Available	1282	Open in IMG/M
3300031679\|Ga0318561_10545562	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031681\|Ga0318572_10504040	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031682\|Ga0318560_10132061	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300031713\|Ga0318496_10470833	Not Available	695	Open in IMG/M
3300031719\|Ga0306917_10286553	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300031719\|Ga0306917_10343136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1159	Open in IMG/M
3300031724\|Ga0318500_10075595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1489	Open in IMG/M
3300031724\|Ga0318500_10511313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	604	Open in IMG/M
3300031736\|Ga0318501_10351037	Not Available	792	Open in IMG/M
3300031736\|Ga0318501_10390130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300031744\|Ga0306918_11556174	Not Available	504	Open in IMG/M
3300031763\|Ga0318537_10197593	Not Available	748	Open in IMG/M
3300031770\|Ga0318521_10033160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2549	Open in IMG/M
3300031770\|Ga0318521_10480894	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031771\|Ga0318546_10214363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1318	Open in IMG/M
3300031781\|Ga0318547_10777200	Not Available	596	Open in IMG/M
3300031795\|Ga0318557_10370262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	658	Open in IMG/M
3300031795\|Ga0318557_10422497	Not Available	613	Open in IMG/M
3300031819\|Ga0318568_10518842	Not Available	743	Open in IMG/M
3300031819\|Ga0318568_10993091	Not Available	518	Open in IMG/M
3300031846\|Ga0318512_10356299	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031910\|Ga0306923_10427749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300031910\|Ga0306923_11335651	Not Available	758	Open in IMG/M
3300031912\|Ga0306921_10357321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1707	Open in IMG/M
3300031942\|Ga0310916_10970638	Not Available	710	Open in IMG/M
3300031945\|Ga0310913_10204082	Not Available	1381	Open in IMG/M
3300031947\|Ga0310909_11506654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300031954\|Ga0306926_11800735	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300031959\|Ga0318530_10072588	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300031959\|Ga0318530_10134872	Not Available	997	Open in IMG/M
3300032041\|Ga0318549_10250258	Not Available	797	Open in IMG/M
3300032041\|Ga0318549_10495755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300032054\|Ga0318570_10300319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	730	Open in IMG/M
3300032054\|Ga0318570_10486456	Not Available	563	Open in IMG/M
3300032059\|Ga0318533_10822816	Not Available	681	Open in IMG/M
3300032059\|Ga0318533_11219101	Not Available	550	Open in IMG/M
3300032060\|Ga0318505_10601227	Not Available	517	Open in IMG/M
3300032065\|Ga0318513_10135002	Not Available	1171	Open in IMG/M
3300032065\|Ga0318513_10220652	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300032065\|Ga0318513_10367575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	701	Open in IMG/M
3300032174\|Ga0307470_11190954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	618	Open in IMG/M
3300032180\|Ga0307471_101552245	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300032180\|Ga0307471_102742559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300032261\|Ga0306920_100286272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2456	Open in IMG/M
3300033289\|Ga0310914_10022445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4914	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.31%
Host-Associated	Host-Associated	4.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.79%
Plants	Host-Associated → Plants	4.69%
Aquatic	Environmental → Aquatic	0.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%
Roots	Host-Associated → Plants → Roots	1.04%
Sediment	Environmental → Aquatic → Sediment	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.69%
Loam	Environmental → Terrestrial → Soil → Loam	15.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.52%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.52%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.52%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.04%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.52%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.52%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.04%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	1.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.52%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.52%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.52%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000897	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300030962	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_05030680	2070309004	Green-Waste Compost	MRLAAIASALAIVLCVAVFGAILFQERSVSGRSPAP
prs_06203200	2070309004	Green-Waste Compost	MRLAGIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGRAPGSVVTVAD
F64_04117070	2170459011	Grass Soil	MRLAAIASALAIVVCAAIFGAIFLQKTSVSPRAPLPAQ
AF_2010_repII_A1DRAFT_101044481	3300000597	Forest Soil	MRLAAIASALTIVLCVAVFGVILFQKASLPLSAPAPPQATPTEGRTPG
AF_2010_repII_A1DRAFT_101463521	3300000597	Forest Soil	MRLAAIASALAIVLCVAVFGAIVFHKASLSVSAPAPPQATPNEGQ
AF_2010_repII_A100DRAFT_10982652	3300000655	Forest Soil	MRLAAIASALTIVLCVAVFGVILFQKASLPLSAPAPPQ
AF_2010_repII_A001DRAFT_100374961	3300000793	Forest Soil	MRLAAIASALTIVLCVAVFGVILFQKASLPLSAPAPPQATPTEGRTPGSVVTVADSAA
AF_2010_repII_A001DRAFT_100539763	3300000793	Forest Soil	MRLAAIASALAIVLCVAVFGAILLQKASLPVPATAPSQATPTEGRTPGSVVT
AP72_2010_repI_A001DRAFT_10319111	3300000893	Forest Soil	MRLAAIASALAIVLCVAAFGAILLQKASIPVPAPAPPHATPTEGR
JGI12167J12862_1018821	3300000897	Forest Soil	MRLAAIASALAILLCAAVFGAIFLQRTSVSGPAPSPALAAPGEGQA
C688J18823_106393001	3300001686	Soil	MRLAAIASALAILLCAAVFGAIFLQRTSVSGPAPSP
JGI25617J43924_101826412	3300002914	Grasslands Soil	MRLTVIASALAIVLCVAVFGAILLQKASLSVPAPAPPQATPTEGRSPGSVATV
JGI25616J43925_103558451	3300002917	Grasslands Soil	MRLAAIASALAIVLCVTVFGAILLQEASRSVPAPAPPQATPTEGRAPGSVAA
JGI25405J52794_100466971	3300003911	Tabebuia Heterophylla Rhizosphere	MRLAAIASALAIVLCVAVFGAIFLQKSSDFASLASAPAPTTPTEGRAPEAVVRTMDNPVA
Ga0066397_101056931	3300004281	Tropical Forest Soil	MRLAATASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGRAPGSVVTVAH
Ga0062595_1024128371	3300004479	Soil	MRLAAIASALAIVLCVAVFGGIFYQKASILAPASTAAPEQVQTTPT
Ga0066395_107350072	3300004633	Tropical Forest Soil	MRLATIASALAIVLCVAVFGAIFLQNRPIPTPAPAQATPTEGRAPEAVV
Ga0066388_1026095853	3300005332	Tropical Forest Soil	MRLAAIASALAIVLCVVVFGAIVFHKASLSVSAPAPPQATPTEGQSPGSVVTVTESAAKSAVDA
Ga0066388_1067642652	3300005332	Tropical Forest Soil	MRLAAIASALAIVVCVAVFGAILLQKSSIPAPAPALPQATPTEGRAPGSVVT
Ga0066388_1083434511	3300005332	Tropical Forest Soil	MRLAAIASAVAVVLCVAVFGAILLQKAFLPVPAPAPPQATPTEGRAPG
Ga0070711_1013766892	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASTLAIVLCVAVFGAIFWQKSSSVTAAVPAQAAAPTEGRAPGP
Ga0066686_109403252	3300005446	Soil	MRLAAIASALAIVLCAAVFGAVLLQKASIPVPVPALSQATPTEGRAPGSVVTVVDS
Ga0070698_1017983692	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIVLCVAVFGGIFYQKASILAPASTAAPEQVQTTPTEGRAPGSVTTVADNAAD
Ga0070679_1021478451	3300005530	Corn Rhizosphere	MRLAAIASALAILLCAAVFGAIFLQRTSVSGPAPSPALAAPGEEPAS
Ga0070697_1001824264	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRLTVIASALAIVLCVAVFGAILLQKASLSVPAPAPPQATP
Ga0070696_1002791411	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIVLCVAVFGAILQKAFVYGRASLPAQAAPTDGRASAVMT
Ga0070665_1001628843	3300005548	Switchgrass Rhizosphere	MRLAAIASALAILLCAAVFGAIFLQRTSVSGPAPS
Ga0066704_107673691	3300005557	Soil	MRLAAIASALAIVLCVAVFGAILSQKASLPVPAPAPPQATPTDGRAPGSVVTVADSA
Ga0066704_108342032	3300005557	Soil	MRLAAIASALAIVLCVAVFGGIFYQKASILAPASTAAPEQVQTTPTEGRA
Ga0066700_103706383	3300005559	Soil	MRLAAIASAVAIVLCVAVFGVILIQKASLPVPAPAPQATRTEGRSPGSVVTLTDSAPERSPMPA
Ga0066691_103132771	3300005586	Soil	MRLAAIASALAIVLCVAVFGAILQKASLPVPAPAPPQAT
Ga0068852_1018238312	3300005616	Corn Rhizosphere	MRLAAIASALAIILCAAVFGAIFLQRTSVSGPTAPALAAPG
Ga0066905_1001561631	3300005713	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGAIFFQKASIPVPASTAAPTQAQATPTEG
Ga0066905_1005701491	3300005713	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPA
Ga0066905_1009683763	3300005713	Tropical Forest Soil	MRLAAIASALATVLCVAVFGAILLQKASIPVPAPAP
Ga0068866_112941431	3300005718	Miscanthus Rhizosphere	MRLAAIASTLAIVLCVAVFGAIFWQKSSSVTAAVPAQAA
Ga0066903_1065950162	3300005764	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGAIFLQKASIPAPASAPA
Ga0066903_1080501782	3300005764	Tropical Forest Soil	MRLTAIVSALAIVLCVAIFGAILFQKASLPVPAPAPLKATPTDGPAPGSA
Ga0066903_1090910091	3300005764	Tropical Forest Soil	MRLAAIASALAIMLCVAVFGVILFQKASLPLSAPAPPQATPTEGRTPGSV
Ga0070717_108380902	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIALCVAVFGAILLQKASLSVPAPAPPQATPT
Ga0070717_114354541	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIVLCVAVFGGIFYQKASILAPASTAAPEQVQTTPTEGRAPGSVTTVADN
Ga0066696_101202603	3300006032	Soil	MRLAAIASTLAILLCVAVFGAIFWQKSLLPAPTPAQAAAP
Ga0075365_108610282	3300006038	Populus Endosphere	MRLAAIASTLAIVVCALIFGAIFLQKSSLSGAAPTPALAAPQE
Ga0075018_101735872	3300006172	Watersheds	MRLAAIASALAIVLCVAVFGAILFQERSVSGRSSAP
Ga0070712_1016512221	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIVLCVAVFGAILLQKASLPVPAPAPPQATPTDGRAPGSVATVADS
Ga0074055_112746243	3300006573	Soil	MRLAAIASALAILLCAAVFGAIFLQRTSVSGPAPSPAL
Ga0074060_114815222	3300006604	Soil	MRLAAIASALAIVLCVAVFGGILLQKASLSVPAPAPPQATPTEGRSPGSVATVADSAAKN
Ga0066653_106202761	3300006791	Soil	MRLAAIASALAIVLCVAVFGGIFYQKAFILDPAST
Ga0066658_102466031	3300006794	Soil	MRLAAIASALAIVLCVAVFGAILSQKASLPVPAPAPPQATPTDGRAP
Ga0066665_116851212	3300006796	Soil	MRLAAIASALAIVLCVAVFGAILQKASLPVPAPAPPQATPTE
Ga0066660_110346561	3300006800	Soil	MRLAAIASALAIVLCVAVFGAILSQKASLPVPAPAPPQATHTDGRAPGSVVTSTDRAPERMPMPADQASPMP
Ga0079220_106675741	3300006806	Agricultural Soil	MRLAAIASALAIMLCAAVFGAIFLQRTSVSGPTAPALAAPGEGQAP
Ga0099794_100827204	3300007265	Vadose Zone Soil	MRRAAIASALAIVLCVAVFGAIFLQKVSIPVPAPAPPQATPTEGRAPGSVVTVADSA
Ga0099827_106091941	3300009090	Vadose Zone Soil	MRLAAIASALAILLCVAVFGAILLQKASLPVPAPAPPHATPTEGR
Ga0099792_107411883	3300009143	Vadose Zone Soil	MRLAGIASALAIVLCVAVFGAILQKAFVSGPAPLPVQAAPTDGQA
Ga0114129_108913922	3300009147	Populus Rhizosphere	MRLAAITSALAIVLCVAVFGAIFLQKASLPVPAPAP
Ga0075423_130994771	3300009162	Populus Rhizosphere	MRLAAIASALAIVLCVAVFGGIFYQKASILAPASTAAPEQVQTTPTEGRAPG
Ga0126374_113988282	3300009792	Tropical Forest Soil	MRLAAIASTLAIVLCVAVFGAIFWQKSLVPVPTPAQAAAPTEGRAPGPVVTNMESEA
Ga0126384_108727421	3300010046	Tropical Forest Soil	MRVAAIASALAIVLCVAAFGGILLQKASIPVPAPA
Ga0126384_123559231	3300010046	Tropical Forest Soil	MRLAGIASALAIVLCVSVFGTILLQKASIPVPAPPSPQATPTEGRAPGTVVT
Ga0126382_106184021	3300010047	Tropical Forest Soil	MRLAAIASALAIVVCVAVFGAILLQKSSIPAPAPALPQATPTEGRAPGSVVTVADS
Ga0126382_115086792	3300010047	Tropical Forest Soil	MRLAAIASTLAIVLCVAVFGAIFWQKSVIPATVPAQAAAPTEGRAPGSVVT
Ga0126373_107105162	3300010048	Tropical Forest Soil	MRLATIASALAIVLCVAVFGAIFWQNRPVPAPQPAQVTPTE
Ga0134082_100996634	3300010303	Grasslands Soil	MRLAAIASALAIVLCVAVFGAILLQKASLPVPAPAPPQATSTE
Ga0134082_101355551	3300010303	Grasslands Soil	MRLAAIASALAIVLCVAVFGAILLQVSLPVPAPAPPQATPIQGRSPGSVVTV
Ga0134065_100865681	3300010326	Grasslands Soil	MRLAAIASALAIVLCVAVFGAILQKASLPVPAPAPPQATPTEDRAPGSTDNADERSPTPA
Ga0134063_104807251	3300010335	Grasslands Soil	MRLAAIASALAIVLCVAVFRAILQKASLPVPAPAPPQATPTEGRAL
Ga0126370_112866993	3300010358	Tropical Forest Soil	MRLAAIASAVAVVLCVAVFGAILLQKAFLPVPAPAPPQATPTEGRAPGSVVTVADSAAES
Ga0126370_113605642	3300010358	Tropical Forest Soil	MRLAAIASALATVLCVAVFGAILLQKASISVPAPAPPQATPTEGRAPGSVAT
Ga0126376_107505603	3300010359	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGTILFQKASIPVPAPEPPQATPTEGRAPGSVATVAHTAAAQLSSLC*
Ga0126372_111898102	3300010360	Tropical Forest Soil	MRLAVIASALAIVLCVAVFGTILFQKASIPVPAPEPPQATPTEGRAPGSVATVADSATE
Ga0126372_131901091	3300010360	Tropical Forest Soil	MRLAAIASALAIVLCVAIFGAILLQKTSLSVPSPAPPQATPTEGRSPGSVAT
Ga0126378_105812944	3300010361	Tropical Forest Soil	MRLAAIASALATVLCVAVFGAILLQKASISVPAPAPPQATPTEGR
Ga0126377_134358263	3300010362	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGTILFQKASIPVPAPEPPQATP
Ga0134066_103760331	3300010364	Grasslands Soil	MRLAAIASAVAIVLCVAVFGIILFQKAFLPAPAPAPPQATPTDARAPGSAVTVTDSAPE
Ga0126379_115856992	3300010366	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGTILLQKASIPVPPPASRQAAPTEGRAPAFVVTEADSAAES
Ga0126379_120023052	3300010366	Tropical Forest Soil	MRLAAIASALAIVLCVAAFSAILLQKASIPVPAPAPPQATPTEGRAPGSVVT
Ga0126379_138317381	3300010366	Tropical Forest Soil	MRLAAIASALAIVLCVALFGAILLQKASLPVPAPAPPQATATEARTPESVVTVAES
Ga0126381_1001899351	3300010376	Tropical Forest Soil	MRLAAIASTLAIVLCVAVFVAIFWQKSLVPVPTPAQAAAPTEGRAP
Ga0126381_1010156074	3300010376	Tropical Forest Soil	MRLAAIASALTIVLCVAVFGVILFQKASLPLSAPAPPQAT
Ga0126381_1030754251	3300010376	Tropical Forest Soil	MRLATIASALAIVLCVAIFGAMFLQRVSIPVPAPEPAPAQTTPTEGRAPGSV
Ga0126381_1043919252	3300010376	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAP
Ga0126383_105317461	3300010398	Tropical Forest Soil	MRLAAIASALATVLCVAVFGSILLQKASISVPAPAPPQATPTEGRAPGSVVTV
Ga0126383_113342791	3300010398	Tropical Forest Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGRAPGSVVTVAHNAAES
Ga0126383_129242452	3300010398	Tropical Forest Soil	MRLAAIASTLAIVLCVAVFGAIFLQKASIPVPAAA
Ga0137365_106704522	3300012201	Vadose Zone Soil	MRLAAIASALAIVLCVAVFGAILFQKASLPVPAPAPPQATPTDGRAPGSAVTVTDSAP
Ga0137363_103049313	3300012202	Vadose Zone Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGRAPGSV
Ga0137374_1000311020	3300012204	Vadose Zone Soil	MRLAAIASALAIVLCVAVFGAILLQKASLPVPAPAPPQATPTDGRAPGSVVTVADSAPERSPMPAAMPTSCSNP
Ga0137366_110456181	3300012354	Vadose Zone Soil	MRLATIASALAILLCVGVFGVIFWQNRPIPASEPT
Ga0137384_103423881	3300012357	Vadose Zone Soil	MRLAAIASTLAIVLCVAVFGAIFLQKASIPAPASSPATAQTTPTEGRAPGSVVTVAD
Ga0137375_112844481	3300012360	Vadose Zone Soil	MRLAAIASALAIVLCVGVFGAIFLQRSSDSLWAPAQIARTEGRAPA
Ga0137360_101329781	3300012361	Vadose Zone Soil	MRRAAIASALAIVLCVAVFGAIFLQKVSIPVPAPAPPQATPTEGRAPGSVVTVA
Ga0137361_115429201	3300012362	Vadose Zone Soil	MRLAAIASALAIVICVAIFGAIFLQKTSGSGPAPL
Ga0137373_100505708	3300012532	Vadose Zone Soil	MRLAAIASALAIVLCVAVFGAILLQKASLPVPAPAPPQATPTDGRAPGSVVTVADSAPERSPMPAAMPTSCSNPNAL
Ga0137396_110580772	3300012918	Vadose Zone Soil	MRLAAIASAVAIVLCVAVFGVILIQKASLPVPAPAPQATRTEGRSPGSVVTLTDSAPERSPMPAA
Ga0137359_101515351	3300012923	Vadose Zone Soil	MRLAAIASAVAIVLCVAVFGVILIQKASLPVQVPAPQ
Ga0137413_109978252	3300012924	Vadose Zone Soil	MRLAAIASALAILLCAAVFGAIFFQRTSVSGPAPSPALASPGE
Ga0126369_104723121	3300012971	Tropical Forest Soil	MRLAAIASTLASVLCVAVFGAIFWQKSLLPAPTPAQAAAPTEGQ
Ga0126369_113467122	3300012971	Tropical Forest Soil	MRLAAIASTLAIVLCVAVFGAIFWQKRVIPATVPAQAAAPTEGRAP
Ga0164305_102378642	3300012989	Soil	MRLAAIASALAIVLCVAVFGAIFYQKASILAPASTAAPEQAQATPTEG
Ga0157378_132673492	3300013297	Miscanthus Rhizosphere	MRLAAIASTLAIVLCVAVFGAIFWQNRPVPAPEPAQAAPTE
Ga0134081_102479201	3300014150	Grasslands Soil	MRLAAIASALAIVLCVAVFGAILQKASLPVPAPAPPQATPTEDRAPGSAANADERSPTPA
Ga0163163_132466251	3300014325	Switchgrass Rhizosphere	MRLAAIASALAIVVCAATFGAIFLQKTSVSPQAPLPAQVAPAERQAPAV
Ga0134072_103373752	3300015357	Grasslands Soil	MRLAAIASTLAILLCVAVFGAIFWQKSLLPAPTPAQAAAPTEGRATGPVVTSMESEA
Ga0182036_106179971	3300016270	Soil	MRLAAIASALAIVLCVAVFGAVLQKAFVSGRAPLPVQAAPTDGQA
Ga0182035_104528511	3300016341	Soil	MRLAAIASALAIVLCVAVFGAIFFQKASIPAPAST
Ga0182032_110082052	3300016357	Soil	MRLATIASALAIMLCVAVFGAIFLQNRPIPTPAPAQAT
Ga0182034_111021102	3300016371	Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPPQA
Ga0182040_102480431	3300016387	Soil	MRLAGIASALAIVLCVAVFGAILLQKASIPVPAPAPPQAT
Ga0182040_110967392	3300016387	Soil	MRLAAIASALAIVVCVAVCGAILLQKASIPVLAPAPPQATSTEGRAPGSVVTVA
Ga0182037_109090512	3300016404	Soil	MRLAGIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGR
Ga0182039_102857673	3300016422	Soil	MRVAAIASALAIVLCVAVFGAILLQKASIPVPAPVPPQATPTEGRAP
Ga0182038_107484001	3300016445	Soil	MRLTVIASALAIVLCVAVFGGILLQKASLSVPAPAPPQATPTEGRSPGSV
Ga0134074_11690862	3300017657	Grasslands Soil	MRLAAIASALAIVLCVAVFGAILLQKTSLPVPAPAPPQATPTDGRAPGSVVTVAD
Ga0134074_11803741	3300017657	Grasslands Soil	MRLATIASALAILLCVGVFGVIFWQNRPIPASGPAQ
Ga0190270_116676071	3300018469	Soil	MRLAAIASALAIFLCAAVFGAIFLQRTSVSGPAPSTALAAPGEEQA
Ga0210406_108154121	3300021168	Soil	MRLAAIASALAIVLCVAVFGAIFLQKNASLSVPAPAPPQ
Ga0193699_102731652	3300021363	Soil	MRLAAIASALAIVVCAAIFGAIFLQKTSVSPQAPLPAQAAPADR
Ga0242662_102851922	3300022533	Soil	MRLAAIASALAIVLCVAVFGAILLQKASLQVPGPAPPQATPTEGRSPGS
Ga0207684_102049872	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIVLCVAVFGAVLQKAFVSGREPLPVQAAPADGQAP
Ga0207663_110373712	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRLAAIVSSLAIVLCVAVFGAILLQKASLQVPGPAVADSATE
Ga0207646_104922662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIVLCLAVFGAIFYQKASILAPASSA
Ga0207646_112889651	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAAIASALAIVLCVAVFGAIFLQKVSIPVPAPAPPQATPTEGRAPGSV
Ga0209438_11779941	3300026285	Grasslands Soil	MRLATFASALAIMLCVAVFGAIFWQNRPVPAPEPAQATPT
Ga0209239_11736851	3300026310	Grasslands Soil	MRLAAIASALAIVLCVAVFGAILFQKASLPVPAPAPPQATPTDGRAPGSAVTVTNSAPGRSPMPADQ
Ga0209154_12241422	3300026317	Soil	MRLAAIASVLAIVLCVAVFGAILLQKASIPVPAPALSQATPTEGRAPGSVVTVVDS
Ga0209647_12287451	3300026319	Grasslands Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPPQ
Ga0209131_13639712	3300026320	Grasslands Soil	MRLAAIASALAIVLCVAVFGAIFYQKASILVPASTAAPEQAQTT
Ga0209808_11989921	3300026523	Soil	MRLAAIASALAIVLCVAVFGAILQKASLPVPAPAPPQATPTEGRAPGSADNAAERS
Ga0209160_11235971	3300026532	Soil	MRLAAIASALAIVLCVAVFGGIFYQKASILAPASTAAPEQVQTTPTE
Ga0209214_10320171	3300027071	Forest Soil	MRLAAIASALAIVLCVAVFGAIFLQKASIPAPASSPATAQTTPTEGRAPGSFT
Ga0208997_10018305	3300027181	Forest Soil	MRLAAIASAVAIVVCVAVFGAIFLQKTSVSPKAPLPAQAAP
Ga0209523_10903751	3300027548	Forest Soil	MRLTVIASALAIVLCVAVFGTIVLQKASLSVPAPAPPQATPTAGRSPGSVATVAESAAKN
Ga0208989_100108284	3300027738	Forest Soil	MRLAAIASAVAIVVCVAVFGAIFLQKTSVSPKAPLPAQADLRRGNLRR
Ga0137415_109559772	3300028536	Vadose Zone Soil	MRRAAIASALAIVLCVAVFGAILLQKASILVPASVPTHAAPTESRA
Ga0307311_101342942	3300028716	Soil	MRLAAIASALAILLCAAVFGAIFLQRTSVSGPAPSPALASPGEAQAS
Ga0307298_100888061	3300028717	Soil	MRLAAIASALAIVVCAAIFGAIFLQKTSVSPQAPLPAQAAPADW
Ga0307298_102295442	3300028717	Soil	MRLAAIASALAILLCAAVFGAIFLQRTSVSGAAPSPALASPGEAQ
Ga0307288_100797782	3300028778	Soil	MRLAAIASALAIVVCAAVFGAIFLQKTSVSPQAPFPPQAAP
Ga0138297_10613531	3300030962	Soil	MRLAAIASALAIVLCVAVFGAILQKAFVSGRAFLPAQAAPTDGRASAVGQIKE
Ga0308194_101395891	3300031421	Soil	VRLAAIVSSLAIVLCVAVFGAILLQKASLQVPGPAPPQATPTEG
Ga0318541_102847191	3300031545	Soil	MRLAGIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATS
Ga0318528_101767181	3300031561	Soil	MRLAGIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEG
Ga0318573_102570422	3300031564	Soil	MRLAAIASALAIVLCVAVFGAIFFQKASIPAPASTAAP
Ga0318515_104275332	3300031572	Soil	MRLAAIASALAIVVCVAVFGAILLQKSSIPAPAPALPQATPT
Ga0318561_101427671	3300031679	Soil	MRLAAIASAPAIVLCVAVFGAIFFQKASIPVPASTAAPTQA
Ga0318561_105455621	3300031679	Soil	MRVAAIASALAIVLCVAAFGGILLQKASIPVPPSSPPQAIPTEGRAPGSVATVADSAAE
Ga0318572_105040402	3300031681	Soil	MRVAAIASALAIVLCVAAFGGILLQKASIPVPPSSPPQAIPT
Ga0318560_101320613	3300031682	Soil	MRVAAIASALAIVLCVAAFGGILLQKASIPVPPSSPPQAIPTEGRAPGSVATFADSAAESAVP
Ga0318496_104708331	3300031713	Soil	MRLAAIASALAIVVCVAVFGAILLQKSSIPAPAPALPQ
Ga0306917_102865533	3300031719	Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGRAP
Ga0306917_103431362	3300031719	Soil	MRLAAIASALAIVVCVAVFGAILLQKSSIPAPAPALPQA
Ga0318500_100755951	3300031724	Soil	MRLAAIASALAIVLCVAVFGAIFFQKASMPAPASTAA
Ga0318500_105113132	3300031724	Soil	MRLAAIASALAIVLCVAVFGAIFLQKASIPAPASVPAT
Ga0318501_103510372	3300031736	Soil	MRLATIASALAIMLCVAVFGAIFLQNRPIPTPAPAQATPTEGRAPEAVVTTMD
Ga0318501_103901302	3300031736	Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPP
Ga0306918_115561741	3300031744	Soil	MRLAAIASALAIVVCVAVFGAILLQKASIPVLAPAPPQATSTEGRAPGSV
Ga0318537_101975932	3300031763	Soil	MRLAAIASALAIVLCVAVFGAIFFQKASIPVPAST
Ga0318521_100331604	3300031770	Soil	MRLAAIASTLAIVLCVAVFGAIFLQKASIPVPAAAPAPTAQA
Ga0318521_104808942	3300031770	Soil	MRLAAIASALAIVLCVALFGAILLQKASLPVPAPAPPQATATEARTPESVVTVAD
Ga0318546_102143633	3300031771	Soil	MRVAAIASALAIVLCVAAFGGILLQKASIPVPPSS
Ga0318547_107772001	3300031781	Soil	MRLAAIASALAIVLCVAVFGAIALQKASIPVPAPAPPQATPT
Ga0318557_103702622	3300031795	Soil	MRLAAIASALAIVLCVAVFGAIFFQKASIPVPASTAAPTQAQATPTEGRAP
Ga0318557_104224971	3300031795	Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPASTAAPTQAKATPTEGRAPGSVT
Ga0318568_105188421	3300031819	Soil	MRLAAIASALAIVVCVAVFGAILLQKASIPVLAPAPPQATSTEGRAPGSVVTVA
Ga0318568_109930911	3300031819	Soil	MRLAAIASALAIVLCVAVFGAIALQKASIPVPAPAPPQATPTEGRA
Ga0318512_103562993	3300031846	Soil	MRVAAIASALAIVLCVAAFGGILLQKASIPVPPSSPPQAIPTEGRAPGSV
Ga0306923_104277493	3300031910	Soil	MRLATIASALAIVLCVAIFGAIFLQRVSIPVSAPE
Ga0306923_113356512	3300031910	Soil	MRLAAIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPTEGR
Ga0306921_103573211	3300031912	Soil	MRVAAIASALAIVLCVAAFGGILLQKASIPVPPSSPPQAIPTEGRAPGS
Ga0310916_109706381	3300031942	Soil	MRLAAIASALAIVLCVSVFGAILLQKASILVPASAPPQATPTESRAPTVADSAAES
Ga0310913_102040821	3300031945	Soil	MRLATIASALAIMLCVAVFGAIFLQNRPIPTPAPAQATPTEGRAPEAVVTTI
Ga0310909_115066542	3300031947	Soil	MRLAAIASTLAIVLCVAVFGAIFLQKASIPVPAAAPAPAAQ
Ga0306926_118007352	3300031954	Soil	MRLAAIASALAIVLCVAVFGAILLQKASLPVPAPPATPGNTH
Ga0318530_100725881	3300031959	Soil	MRVAAIASALAIVLCVAVFGAILLQKASIPVPASTAAPTQ
Ga0318530_101348722	3300031959	Soil	MRLAAIASALAIVVCVAVFSAILLQKSSIPAPAPALPQAT
Ga0310897_100541901	3300032003	Soil	MRLAAIASALAIILCAAVFGAIFLQRTSVSGPTAPALAAPGEGQ
Ga0318549_102502581	3300032041	Soil	MRLAAIASALAIVLCVAVFGAIFFQKASIPVPASTAAPTQAQ
Ga0318549_104957552	3300032041	Soil	MRLAAIASTLAIVLCVAVFGAIFLQKASIPVPAAAPTTATAQATP
Ga0318570_103003191	3300032054	Soil	MRLAAIASALAIVLCVAVFGAIFYQKASILAPASTAATEQVQTTPTEGRAPGSVTTVAD
Ga0318570_104864562	3300032054	Soil	MRLAAIASALAIVVCVAVSGAILLQKSSIPAPAPALPQ
Ga0318533_108228161	3300032059	Soil	MRLAVIASALAIVLCVAVFGTILFQKASIPVPAPESPQATPTEGR
Ga0318533_112191011	3300032059	Soil	MRLAAIASTLAIVLCVAVFGAIFLQKASIPVPAAAPTTATAQATPTEGRAPG
Ga0318505_106012272	3300032060	Soil	MRLAVIASALAIVLCVAVFGTILFQKASIPVPAPESPQATPTEGRAPGSVVTVADSAADSVAAA
Ga0318513_101350022	3300032065	Soil	MRLAAIASALAIMLCVAVFGAIFYQKASILAPASTAAPEQAQ
Ga0318513_102206523	3300032065	Soil	MRLAGIASALAIVLCVAVFGAILLQKASIPVPAPAPPQATPT
Ga0318513_103675751	3300032065	Soil	MRLAAIASALAIVLCVAVFGAIFFQKASIPVPASTAAPT
Ga0307470_111909542	3300032174	Hardwood Forest Soil	MRLAAIASALAIVLCVAVFGAIFYQKASILVPASTAATEQAQTTPT
Ga0307471_1015522451	3300032180	Hardwood Forest Soil	MRLAAIASALAIVLCVAVFGAILFQKDSLSVPAPAPPQATPTD
Ga0307471_1027425591	3300032180	Hardwood Forest Soil	MRLAAIASALAIVLCVAVLGAVFFQKASTPAPASTPAPAQA
Ga0306920_1002862721	3300032261	Soil	MRLATIASALAIVLCVAIFGAIFLQRVSISVPAPE
Ga0310914_100224451	3300033289	Soil	MRLAAIASALAIVLCVAVFGAIALQKASIPVPAPAPPQATPTEGRAPGSVVTVAHN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028293

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences