Metagenome Family F028647

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F028647
Family Type	Metagenome
Number of Sequences	191
Average Sequence Length	46 residues
Representative Sequence	QEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Number of Associated Samples	97
Number of Associated Scaffolds	191

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.26 %
% of genes near scaffold ends (potentially truncated)	67.54 %
% of genes from short scaffolds (< 2000 bps)	68.06 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.586 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.131 % of family members)
Environment Ontology (ENVO)	Unclassified (49.215 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.921 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.06% β-sheet: 0.00% Coil/Unstructured: 56.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 191 Family Scaffolds
PF04392	ABC_sub_bind	6.81
PF00550	PP-binding	2.09
PF01381	HTH_3	2.09
PF00589	Phage_integrase	1.57
PF04909	Amidohydro_2	1.57
PF13676	TIR_2	1.57
PF03401	TctC	1.05
PF13191	AAA_16	1.05
PF07452	CHRD	1.05
PF01258	zf-dskA_traR	1.05
PF00072	Response_reg	0.52
PF09834	DUF2061	0.52
PF00199	Catalase	0.52
PF07859	Abhydrolase_3	0.52
PF13701	DDE_Tnp_1_4	0.52
PF07045	DUF1330	0.52
PF02371	Transposase_20	0.52
PF07758	DUF1614	0.52
PF00005	ABC_tran	0.52
PF00248	Aldo_ket_red	0.52
PF13414	TPR_11	0.52
PF13384	HTH_23	0.52
PF12849	PBP_like_2	0.52
PF13560	HTH_31	0.52
PF04325	DUF465	0.52
PF13683	rve_3	0.52
PF00753	Lactamase_B	0.52
PF02518	HATPase_c	0.52
PF01548	DEDD_Tnp_IS110	0.52
PF01068	DNA_ligase_A_M	0.52
PF01527	HTH_Tnp_1	0.52
PF00126	HTH_1	0.52
PF10028	DUF2270	0.52

COG ID	Name	Functional Category	% Frequency in 191 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	6.81
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	1.05
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.05
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.05
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.52
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.52
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.52
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.52
COG4089	Uncharacterized membrane protein	Function unknown [S]	0.52
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
All Organisms	root	All Organisms	31.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
cellular organisms	root	All Organisms → cellular organisms	31.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.14 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.52 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.57 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.52 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.52 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.71 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.52 %
Proteobacteria bacterium SG_bin9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin9	0.52 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.24 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.62 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.05 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.52 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.52 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.52 %
Proteobacteria bacterium SG_bin9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin9	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.24 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.09 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.05 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.52 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.52 %
Proteobacteria bacterium SG_bin9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin9	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.24 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.05 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.05 %
Methylosinus sporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	0.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.52 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.52 %
Proteobacteria bacterium SG_bin9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin9	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.24 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Bradyrhizobium sp. AT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	1.05 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.05 %
Methylosinus sporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	0.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.52 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.52 %
Proteobacteria bacterium SG_bin9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin9	0.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1013878	Not Available	1535	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1019357	Not Available	956	Open in IMG/M
3300000956\|JGI10216J12902_101409734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300001867\|JGI12627J18819_10410861	Not Available	551	Open in IMG/M
3300004633\|Ga0066395_10288384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	893	Open in IMG/M
3300004633\|Ga0066395_10569374	Not Available	661	Open in IMG/M
3300005332\|Ga0066388_100904633	Not Available	1460	Open in IMG/M
3300005332\|Ga0066388_102678304	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005332\|Ga0066388_103334551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	820	Open in IMG/M
3300005332\|Ga0066388_104599063	Not Available	702	Open in IMG/M
3300005332\|Ga0066388_105801714	Not Available	624	Open in IMG/M
3300005332\|Ga0066388_106430703	Not Available	592	Open in IMG/M
3300005332\|Ga0066388_108491399	Not Available	511	Open in IMG/M
3300005436\|Ga0070713_100847291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	878	Open in IMG/M
3300005467\|Ga0070706_101819019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300005468\|Ga0070707_101721086	Not Available	594	Open in IMG/M
3300005468\|Ga0070707_101943917	Not Available	556	Open in IMG/M
3300005471\|Ga0070698_100046663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4429	Open in IMG/M
3300005713\|Ga0066905_100342437	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005713\|Ga0066905_100804699	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005713\|Ga0066905_102264601	Not Available	507	Open in IMG/M
3300005713\|Ga0066905_102325774	Not Available	501	Open in IMG/M
3300005764\|Ga0066903_101040026	All Organisms → cellular organisms → Bacteria → Proteobacteria	1502	Open in IMG/M
3300005764\|Ga0066903_102437824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300005764\|Ga0066903_103304893	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005764\|Ga0066903_103694470	Not Available	823	Open in IMG/M
3300005764\|Ga0066903_104378426	Not Available	754	Open in IMG/M
3300005764\|Ga0066903_105628961	Not Available	659	Open in IMG/M
3300005764\|Ga0066903_108580000	Not Available	520	Open in IMG/M
3300009162\|Ga0075423_11889075	Not Available	645	Open in IMG/M
3300009792\|Ga0126374_10282151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300010043\|Ga0126380_11764260	Not Available	558	Open in IMG/M
3300010046\|Ga0126384_10170329	Not Available	1696	Open in IMG/M
3300010046\|Ga0126384_10535960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300010046\|Ga0126384_10655692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	925	Open in IMG/M
3300010046\|Ga0126384_12058760	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin9	547	Open in IMG/M
3300010046\|Ga0126384_12300524	Not Available	520	Open in IMG/M
3300010047\|Ga0126382_10013948	Not Available	3970	Open in IMG/M
3300010047\|Ga0126382_11832469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300010048\|Ga0126373_11823057	Not Available	672	Open in IMG/M
3300010335\|Ga0134063_10050132	All Organisms → cellular organisms → Bacteria → Proteobacteria	1822	Open in IMG/M
3300010358\|Ga0126370_10433029	Not Available	1091	Open in IMG/M
3300010358\|Ga0126370_10486826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1038	Open in IMG/M
3300010358\|Ga0126370_10863821	Not Available	813	Open in IMG/M
3300010359\|Ga0126376_10217609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1598	Open in IMG/M
3300010362\|Ga0126377_10411135	Not Available	1366	Open in IMG/M
3300010362\|Ga0126377_12747910	Not Available	567	Open in IMG/M
3300010366\|Ga0126379_10304528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1601	Open in IMG/M
3300010366\|Ga0126379_10501051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1286	Open in IMG/M
3300010366\|Ga0126379_10895810	Not Available	989	Open in IMG/M
3300010366\|Ga0126379_11543843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300010376\|Ga0126381_100803142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1351	Open in IMG/M
3300010376\|Ga0126381_101197247	Not Available	1098	Open in IMG/M
3300010398\|Ga0126383_10804424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300010398\|Ga0126383_11058334	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300010398\|Ga0126383_11938312	Not Available	677	Open in IMG/M
3300010398\|Ga0126383_12707331	Not Available	579	Open in IMG/M
3300012202\|Ga0137363_10130248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1954	Open in IMG/M
3300012202\|Ga0137363_11315118	Not Available	611	Open in IMG/M
3300012206\|Ga0137380_11437472	Not Available	574	Open in IMG/M
3300012683\|Ga0137398_10794235	Not Available	661	Open in IMG/M
3300012927\|Ga0137416_10203657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1590	Open in IMG/M
3300012948\|Ga0126375_10368567	Not Available	1026	Open in IMG/M
3300012957\|Ga0164303_10167840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M
3300012971\|Ga0126369_10766334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1045	Open in IMG/M
3300012971\|Ga0126369_13686127	Not Available	502	Open in IMG/M
3300012986\|Ga0164304_11886121	Not Available	500	Open in IMG/M
3300015373\|Ga0132257_102494250	Not Available	672	Open in IMG/M
3300016270\|Ga0182036_11209643	Not Available	628	Open in IMG/M
3300016270\|Ga0182036_11305240	Not Available	606	Open in IMG/M
3300016270\|Ga0182036_11600832	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	548	Open in IMG/M
3300016319\|Ga0182033_10403969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300016319\|Ga0182033_11500058	Not Available	608	Open in IMG/M
3300016341\|Ga0182035_10275406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1370	Open in IMG/M
3300016341\|Ga0182035_10662081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300016341\|Ga0182035_11891333	Not Available	541	Open in IMG/M
3300016357\|Ga0182032_11634217	Not Available	561	Open in IMG/M
3300016371\|Ga0182034_10643213	Not Available	898	Open in IMG/M
3300016387\|Ga0182040_11429238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	586	Open in IMG/M
3300016387\|Ga0182040_11951236	Not Available	504	Open in IMG/M
3300016404\|Ga0182037_11142992	Not Available	682	Open in IMG/M
3300016404\|Ga0182037_11558782	Not Available	587	Open in IMG/M
3300016404\|Ga0182037_12033642	Not Available	516	Open in IMG/M
3300016422\|Ga0182039_10095707	Not Available	2177	Open in IMG/M
3300016422\|Ga0182039_10868180	Not Available	804	Open in IMG/M
3300021560\|Ga0126371_11038586	Not Available	960	Open in IMG/M
3300025910\|Ga0207684_10392350	Not Available	1193	Open in IMG/M
3300025922\|Ga0207646_11428933	Not Available	601	Open in IMG/M
3300025928\|Ga0207700_10639755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	948	Open in IMG/M
3300026331\|Ga0209267_1064584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1614	Open in IMG/M
3300027874\|Ga0209465_10349306	Not Available	741	Open in IMG/M
3300031546\|Ga0318538_10015454	All Organisms → cellular organisms → Bacteria	3289	Open in IMG/M
3300031561\|Ga0318528_10426465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300031564\|Ga0318573_10196159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300031573\|Ga0310915_10715554	Not Available	706	Open in IMG/M
3300031679\|Ga0318561_10486384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300031744\|Ga0306918_11256394	Not Available	570	Open in IMG/M
3300031744\|Ga0306918_11291980	Not Available	561	Open in IMG/M
3300031751\|Ga0318494_10157345	Not Available	1282	Open in IMG/M
3300031770\|Ga0318521_10469507	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031781\|Ga0318547_10686100	Not Available	636	Open in IMG/M
3300031781\|Ga0318547_10818056	Not Available	580	Open in IMG/M
3300031781\|Ga0318547_10947641	Not Available	537	Open in IMG/M
3300031793\|Ga0318548_10164191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300031793\|Ga0318548_10505445	Not Available	590	Open in IMG/M
3300031798\|Ga0318523_10444122	Not Available	643	Open in IMG/M
3300031833\|Ga0310917_10811705	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031833\|Ga0310917_10920887	Not Available	588	Open in IMG/M
3300031890\|Ga0306925_10144445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2558	Open in IMG/M
3300031890\|Ga0306925_11143362	Not Available	784	Open in IMG/M
3300031890\|Ga0306925_11303787	Not Available	721	Open in IMG/M
3300031890\|Ga0306925_12098376	Not Available	529	Open in IMG/M
3300031890\|Ga0306925_12104115	Not Available	529	Open in IMG/M
3300031893\|Ga0318536_10404492	Not Available	689	Open in IMG/M
3300031894\|Ga0318522_10206210	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300031910\|Ga0306923_11499703	Not Available	705	Open in IMG/M
3300031912\|Ga0306921_10267921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2000	Open in IMG/M
3300031912\|Ga0306921_10494516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1422	Open in IMG/M
3300031912\|Ga0306921_10522064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1379	Open in IMG/M
3300031946\|Ga0310910_10187361	All Organisms → cellular organisms → Bacteria → Proteobacteria	1600	Open in IMG/M
3300031946\|Ga0310910_10568188	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300031946\|Ga0310910_11116804	Not Available	613	Open in IMG/M
3300031947\|Ga0310909_10173697	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300031954\|Ga0306926_10236187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2266	Open in IMG/M
3300031954\|Ga0306926_10244950	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2222	Open in IMG/M
3300031959\|Ga0318530_10510309	Not Available	500	Open in IMG/M
3300032001\|Ga0306922_10123062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2759	Open in IMG/M
3300032001\|Ga0306922_10143365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2551	Open in IMG/M
3300032001\|Ga0306922_11382261	Not Available	708	Open in IMG/M
3300032035\|Ga0310911_10760380	Not Available	561	Open in IMG/M
3300032039\|Ga0318559_10359992	Not Available	677	Open in IMG/M
3300032043\|Ga0318556_10424126	Not Available	696	Open in IMG/M
3300032059\|Ga0318533_10062126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2513	Open in IMG/M
3300032059\|Ga0318533_10848224	Not Available	670	Open in IMG/M
3300032064\|Ga0318510_10324897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300032065\|Ga0318513_10621829	Not Available	529	Open in IMG/M
3300032076\|Ga0306924_11432846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300032089\|Ga0318525_10466010	Not Available	647	Open in IMG/M
3300032090\|Ga0318518_10508643	Not Available	617	Open in IMG/M
3300033289\|Ga0310914_11487187	Not Available	580	Open in IMG/M
3300033289\|Ga0310914_11861272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.91%
Host-Associated	Host-Associated	2.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.91%
Plants	Host-Associated → Plants	2.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.05%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.96%
Loam	Environmental → Terrestrial → Soil → Loam	20.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.52%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.52%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10138781	3300000655	Forest Soil	QEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRGQPLSSDK*
AP72_2010_repI_A100DRAFT_10193572	3300000837	Forest Soil	LLGLAQEHIRPLIGVIDRLNEADAEDELRVISKQLTRLCLRVQSRASV*
JGI10216J12902_1014097341	3300000956	Soil	MAQEHIRPLIGVIDRLSEADAEDELRVINKQLTRLSFRAQPLPSDK*
JGI12630J15595_100760361	3300001545	Forest Soil	LIGLIDRLNEANAEDELRVINRQLARLYFRVQPLPSD*
JGI12627J18819_104108611	3300001867	Forest Soil	VSEAPEQLFDLTQEHIRPLIGLIDRLNEVGAEDELRVIAKQLTRLVYRAQPLSLG*
JGIcombinedJ26739_1011770521	3300002245	Forest Soil	IGLIDRLNEANAEDELRVINRQLARLYFRVQPLPSD*
Ga0066395_102883841	3300004633	Tropical Forest Soil	AQEHIRPLIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLPSDK*
Ga0066395_105693741	3300004633	Tropical Forest Soil	MTLHHAPEQLFDLTQEHIRPLIGLIDRLNEVGAEDELKVIAKQLTRLVYRAQPLSPQ*
Ga0066388_1009046331	3300005332	Tropical Forest Soil	RPLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPSD*
Ga0066388_1010947241	3300005332	Tropical Forest Soil	QAQEYIRPLIGVIDRLNEADAENELRVINRQLARLCFRVQPLPND*
Ga0066388_1026783041	3300005332	Tropical Forest Soil	EQLLELAQEHIRPLIGVIDRLNEAKAEDELRVISKQLTRLSFRAQPLLSDK*
Ga0066388_1033345511	3300005332	Tropical Forest Soil	FELTQEHIRPLIGLIDRLNEVGAEDELRVISKQLTRLVYRAQPLPSEK*
Ga0066388_1035429081	3300005332	Tropical Forest Soil	QRTRELELIDRLNEADDAEDELRVIDKQLTRLCFRVSPSDK*
Ga0066388_1045990632	3300005332	Tropical Forest Soil	LELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK*
Ga0066388_1058017141	3300005332	Tropical Forest Soil	FELTQEHIRPLIGLIDRLNEVGAEDELRVISKQLTRLVYRTQPLPREK*
Ga0066388_1064307031	3300005332	Tropical Forest Soil	EQLLELAQKHIRPLIDVIDRLNEVGAEDELRVISKQLTRLCFRVQPLTSDK*
Ga0066388_1084913991	3300005332	Tropical Forest Soil	QLLEQTQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK*
Ga0070713_1008472911	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LAQEHIRPLIGVIDRLNEAKTADELRVTSKQLARLSFRAQPLLSDK*
Ga0070706_1018190191	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QLLELAQEHIRPLIGVIDRLNEAKAEDELRVISKQLTRLSFRAQPLLSDK*
Ga0070707_1017210862	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EQLFDVTQEHIRPLMGLIDRLNEVGADDELRVIAKQLTRLVYRAQPLPLQ*
Ga0070707_1019439171	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ELAQEHIRPLIGVIDRLNEADAEDELRVISKQLTRLCFRVQPLPSDK*
Ga0070698_1000466631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AQTPEQLLELAQEHIRPLIGVIDRLNEADAEDELRVINKQLTRLCFRVQPLPSDK*
Ga0066905_1003424371	3300005713	Tropical Forest Soil	MPAETPDRLLELTQEHIRPVIGLIDRLNEAGAEDELRVISKQLTRLSFRVDK*
Ga0066905_1008046991	3300005713	Tropical Forest Soil	ELAQEHIRPLIGVIDRLNEADAEDELRVISKQLTRLCLRAQQLPSGQ*
Ga0066905_1012729701	3300005713	Tropical Forest Soil	QLLEEAQEHIRPLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPSD*
Ga0066905_1022646011	3300005713	Tropical Forest Soil	EQLLELTQEHIRPLIPLIDRLNEAGAEDELKVISRQLTRLSFRAQPLPSGK*
Ga0066905_1023257741	3300005713	Tropical Forest Soil	QLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRVQPLSSDK*
Ga0066903_1010400263	3300005764	Tropical Forest Soil	QTPEQLLEQAQEHIRPLIGLIDRLNEANAEDELRVINRQLTRLSLRVQPLPSD*
Ga0066903_1013709853	3300005764	Tropical Forest Soil	PLIGVIDRLNEADAENELRVINRQLARLCFRVQPLPND*
Ga0066903_1024378241	3300005764	Tropical Forest Soil	MAQEYIRPLIGVIDRLNEADAEDELRVISKHSRGCASGQPLPSDK*
Ga0066903_1032227723	3300005764	Tropical Forest Soil	VVIDRLNEAAAEDELRVISKQLARLSFRVQPFPGDT*
Ga0066903_1033048931	3300005764	Tropical Forest Soil	TQEHIRPLIGLIDRLNEVGAEDELSVISKQLTRLVYRAQPLPSRR*
Ga0066903_1036944702	3300005764	Tropical Forest Soil	VTQEHIRPLIGLIDRLNEAGAEDELRVISKQLARLSFRVQPLRSG*
Ga0066903_1043784261	3300005764	Tropical Forest Soil	TPEQLLEQAQEYIRPLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPSD*
Ga0066903_1055680384	3300005764	Tropical Forest Soil	PLIDRLNEAGAEDELKVISRQLTRLSFRAQPLPSGK*
Ga0066903_1056289611	3300005764	Tropical Forest Soil	VPAETPERLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQP
Ga0066903_1081268072	3300005764	Tropical Forest Soil	IGVIDRLNEADAEDELRVISKHSRGCASGQPLPQR*
Ga0066903_1085800001	3300005764	Tropical Forest Soil	QEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK*
Ga0081455_110059881	3300005937	Tabebuia Heterophylla Rhizosphere	LIDRLNEAGAKDELRVISKQLTRLSLRVQSLPGDK*
Ga0070717_102928481	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IRPLIGVIDRLNEAKAEDELRVISKQLTRLSFRAQPLLSDK*
Ga0111538_139690701	3300009156	Populus Rhizosphere	MIDRLNQAGAEDELKVISRQLTRLVFRAQPLPSGK*
Ga0075423_118890752	3300009162	Populus Rhizosphere	QLLQLTQEHIRPLIGMIDRLNQAGAEDELKVISRQLTRLVFRAQPLPSGK*
Ga0126374_102821511	3300009792	Tropical Forest Soil	EHIRPLIGLIDRLNEANAEDELRVTNRQLARLSLRVQPLPSD*
Ga0126374_103041142	3300009792	Tropical Forest Soil	MIDRLNEAGAEDELRVITKQLTRLVFRAQPVPSGK*
Ga0126380_117642602	3300010043	Tropical Forest Soil	AQEHIRPLIEVIDRLNEADAEDELKVISKQLTRLCFRVQPLPGDT*
Ga0126384_101703291	3300010046	Tropical Forest Soil	LLELTQEHIRPLIGLIDRLNEAGAEDELRVIGKQLTRLCFRVQPLPSDK*
Ga0126384_105359601	3300010046	Tropical Forest Soil	TPEQLLGLAQEHIRPLIGVIDRLNEADAEEERRVISKQLTRLYFRVQSRTSV*
Ga0126384_106080592	3300010046	Tropical Forest Soil	LIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLSSDK*
Ga0126384_106556921	3300010046	Tropical Forest Soil	LSQEYIRPLIALIDQLNETGAEDELRVISKQLARLSFRIGAPLPSGKSRSVH*
Ga0126384_109586532	3300010046	Tropical Forest Soil	MFRVNEAGAENELRVISKQLTRLSFRAQPLPSAK*
Ga0126384_119130212	3300010046	Tropical Forest Soil	PLIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLPSDK*
Ga0126384_120587602	3300010046	Tropical Forest Soil	EHIRPLIAMIDRLNEAGAEHELRVITKQLTRLVFRAQPLPSGK*
Ga0126384_123005242	3300010046	Tropical Forest Soil	MAVPSLLVWHPGAPEQLFDLTQEHIRPLIGLIDRLNEVGAEDEVRVIAKQLTRLVYRAQPLPLR*
Ga0126382_100139487	3300010047	Tropical Forest Soil	QEHIRPLIAMIDRLNEAGAEHELRVITKQLTRLVFRAQPLPSGK*
Ga0126382_118324691	3300010047	Tropical Forest Soil	ELAQEHIRPLIGVIDRLNEAKAEDELRVISKQLTRLSFRAQPLPSDK*
Ga0126373_118230573	3300010048	Tropical Forest Soil	LELAQEHIRPLIGVIDRLNEAKAEDELRVISKQLARLSFRAQPLLSDK*
Ga0134063_100501321	3300010335	Grasslands Soil	QLLELAQEYIRPLIGVIDRLNQADAEDELRVISKQLTRLCFRVQPLPSDK*
Ga0126370_104330293	3300010358	Tropical Forest Soil	DLAQEHIRPLIGVIDRLNEAKAEDELRVISKQLARLSFRAQPLLSDK*
Ga0126370_104868263	3300010358	Tropical Forest Soil	PEQLLELAQEHIRPLIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLPSDK*
Ga0126370_108638212	3300010358	Tropical Forest Soil	LELAQEHIRPLIGVIDRLNEAKAEDELRVISKQLTRLCFRVQPRPGDT*
Ga0126376_102176093	3300010359	Tropical Forest Soil	RSVSSAPEQLFDVTQEYIRPLIGLIDRLHEVGAEDELRVITKQLTRLVYRAQSH*
Ga0126372_102540302	3300010360	Tropical Forest Soil	RPLIGVIDRLNEADAEDELRVISKQLTRLCFRVQPLPSDK*
Ga0126378_124390341	3300010361	Tropical Forest Soil	PLIGVIDRLNEANAEDELRVINRQLTRLSFRVQPLPTD*
Ga0126377_104111351	3300010362	Tropical Forest Soil	EQLFDLSQEHIRPLIELIDRLNEVGAEHEVRVIAKQLTRLVYRAQPLPLG*
Ga0126377_127479101	3300010362	Tropical Forest Soil	DRLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVDK*
Ga0126379_103045281	3300010366	Tropical Forest Soil	LLELAQEHIRPLIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLPSDK*
Ga0126379_105010515	3300010366	Tropical Forest Soil	EHIRPLIGLIDRLSEAGAEDELRVISKQLTRRSFRAQPPPSGK*
Ga0126379_108958101	3300010366	Tropical Forest Soil	LLELAQEHIRPLIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLSSDK*
Ga0126379_115438432	3300010366	Tropical Forest Soil	QEYIRPLIAMIDRLNEAGAEDELRVITKQLTRLVFRAQPLPNGK*
Ga0126381_1008031421	3300010376	Tropical Forest Soil	SEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRRSFRAQPPPSGK*
Ga0126381_1011972472	3300010376	Tropical Forest Soil	AQEHIRPLIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLSSDK*
Ga0126381_1031336403	3300010376	Tropical Forest Soil	GVIDRLNEAEAEDELRVISKQLTRLSFRAQPLPSDK*
Ga0126383_108044241	3300010398	Tropical Forest Soil	IRPLIAMIDRLNEAGAEHELRVITKQLTRLVFRAQPFPSGK*
Ga0126383_110583341	3300010398	Tropical Forest Soil	QEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPPPSGK*
Ga0126383_111187631	3300010398	Tropical Forest Soil	VIDRLNEAEAEDELRVISKQLTRLSFRAQPLPSDK*
Ga0126383_119383121	3300010398	Tropical Forest Soil	PEQLLEQAQEYIRPLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPSD*
Ga0126383_127073312	3300010398	Tropical Forest Soil	TPEQLLELTQEHIRPLIAMIDRLNEAGAEHELRVITKQLTRLVFRAQPLPSGK*
Ga0137363_101302482	3300012202	Vadose Zone Soil	LDLSQEHIRPLIGLIDRLNEVGAEDELRVIAKQLTRLVYRAQPLSLG*
Ga0137363_113151181	3300012202	Vadose Zone Soil	IRPLIGVIDRLNEAKAEDELRVISKQLARLSFRAQPLLSDK*
Ga0137363_117054071	3300012202	Vadose Zone Soil	LIGVIDRLNEADAEDELRVISKQLTRLCFRVQPLPSDK*
Ga0137380_114374721	3300012206	Vadose Zone Soil	AQTPEQLLDSAQEYIRPLIGMIDELNEASAEDELRVIRQQLTRLVFRAQPLDRSNKRSL*
Ga0137398_107942352	3300012683	Vadose Zone Soil	EQLLELTQEHIRPLIAMIDRLNEAGAEHELRVITKQLTRLVFRAQPLPSGK*
Ga0137416_102036571	3300012927	Vadose Zone Soil	QEHIRPLIGVIDWLNEVGAEDELRVISKQLTRLVFRAQPLPSGK*
Ga0126375_103685671	3300012948	Tropical Forest Soil	MPAETPDRLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVDK*
Ga0164303_101678403	3300012957	Soil	AQTPEQLLEQAQEYIRPLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPSD*
Ga0126369_107663341	3300012971	Tropical Forest Soil	PEQLLELAQEHIRPLIGVIDRLNEAKAEDELRVISKQLTRLCFRVQPRPGDT*
Ga0126369_108391311	3300012971	Tropical Forest Soil	VPAQTSEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTR
Ga0126369_136861271	3300012971	Tropical Forest Soil	SEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPPPSGK*
Ga0164304_118861212	3300012986	Soil	EQLLELAQEHIRPLIGVIDRLNEAKTADELRVTSKQLARLSFRAQPLLSDK*
Ga0132257_1024942501	3300015373	Arabidopsis Rhizosphere	IRPLIGMIDRLNQAGAEDELKVISRQLTRLVFRAQPLPGGK*
Ga0182036_112096431	3300016270	Soil	PLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0182036_113052402	3300016270	Soil	IGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0182036_116008321	3300016270	Soil	TREQLLEQAQEYIRPLIGVIDRLNEANAEDELRVINKQLARLCFRVQPLPSD
Ga0182041_122158381	3300016294	Soil	PLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPND
Ga0182033_104039691	3300016319	Soil	EHIRPLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPND
Ga0182033_115000581	3300016319	Soil	SGAPEQLFDLTQEHIRPLIGLIDRLNELGAEDELKVIAKQLTRLIYRAQPLPLQ
Ga0182033_115956321	3300016319	Soil	LIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0182033_116695911	3300016319	Soil	EVIDRLNEAGAEDELSVISKQLTRLSFRVQPLPSDK
Ga0182035_102754061	3300016341	Soil	QLLELAQEHIRPLIGVIDRLNEADAEDELRVISKQLTRLCLRVQPLPSGE
Ga0182035_106620812	3300016341	Soil	ASEQLFDLTQEHIRPLIGLIDRLNEVGAEDELGVVAQQLTRLVYRAQPLPLVE
Ga0182035_114694232	3300016341	Soil	VIDRLNEADAEDELRVISKQLTRLSFRVQPLSSDR
Ga0182035_118913332	3300016341	Soil	SPEQLLEVAQEHIRPLIGVIDQLNEANAEDELRVINKQLARLCFRVQPLPSD
Ga0182032_113278141	3300016357	Soil	RPLIGLIDRLNEANAEDELRVINRQLARLCFRVQPLPSD
Ga0182032_116342172	3300016357	Soil	PAQTPEQLLEQAQEHIRPLIGVIDQLNEADAEDELRVISKQLTRLCFRADAP
Ga0182034_106432131	3300016371	Soil	QEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPIGK
Ga0182040_114292383	3300016387	Soil	LELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRAEPLSSGK
Ga0182040_119512361	3300016387	Soil	PAQTPEQLLELAQEHIRPLIGVIDRLNEADAEDELTVISKQLTRLCFRVQR
Ga0182037_111429921	3300016404	Soil	TQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0182037_115587821	3300016404	Soil	AQEHIRPLIAMIDRLNEAGAEDELRVISKQLTRLVYRAQLIPTRK
Ga0182037_120336421	3300016404	Soil	ASEQLFDLTQEHIRPLIGLIDRLNEVGAEDELGVIAKQLTRLVYRAQPLPLVE
Ga0182039_100957071	3300016422	Soil	EQLFDLTQEHIRPLIGLIDRLNEVGAEDELGVIAKQLTRLVYRAQPLPLVE
Ga0182039_108681801	3300016422	Soil	ASGAPGQLFDLTQEHIRPLIELIDRLNEVGAEDELRVIAKHLTRLVYRAQPLQ
Ga0182039_114581872	3300016422	Soil	IRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0182039_119216072	3300016422	Soil	AQEYIRPLIGVIDQLNEANAEDELRVINKQLARLCFRVQPLPSD
Ga0182038_120448371	3300016445	Soil	LIERLSEGGAEDELRVISKQLTRLSFRAQPLPSGERAA
Ga0126371_110385861	3300021560	Tropical Forest Soil	AQEHIRPLIGVIDRLNEAEAEDELRVISKQLTRLSFRAQPLSSDK
Ga0126371_119074421	3300021560	Tropical Forest Soil	GLIDRLSEAGAEDELRVISKQLTRRSFRAQPPPSGK
Ga0207684_103923503	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LLELAQEHIRPLIGVIDRLNEAKAEDELRVISKQLTRLSFRAQPLLSDK
Ga0207646_114289331	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	EQLFDVTQEHIRPLMGLIDRLNEVGADDELRVIAKQLTRLVYRAQPLPLQ
Ga0207700_106397551	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	QEHIRPLIGVIDRLNEAKTADELRVTSKQLARLSFRAQPLLSDK
Ga0209267_10645843	3300026331	Soil	TPERLFELTQEYIRPLIAMIDRLNEAGAEDELRVISKQLTRLCFRVQPLPSDK
Ga0209465_103493061	3300027874	Tropical Forest Soil	MTLHHAPEQLFDLTQEHIRPLIGLIDRLNEVGAEDELKVIAKQLTRLVYRAQPLSPQ
Ga0318538_100154541	3300031546	Soil	PEQLLEQAQEHIRPLIGLIDRLNEANAEDELRVINRQLARLCFRVQPLPSD
Ga0318528_104264651	3300031561	Soil	HIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0318573_101961591	3300031564	Soil	LSQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0310915_104092051	3300031573	Soil	LEQAQEHIRPLIGLIDRLNEANAEDELRVINRQLARLCFRVQPLPSD
Ga0310915_107155541	3300031573	Soil	QLLEQTQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0318555_107358731	3300031640	Soil	KYIRPLIEVIDRLNEAGAEDELRVISKQLTRLSFRVQPLPSDK
Ga0318561_104863842	3300031679	Soil	QEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0318574_101520951	3300031680	Soil	AQEHIRPLIGLIDRLNEANAEDELRVINRQLARLCFRVQPLPSD
Ga0306918_101317251	3300031744	Soil	IRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0306918_103613981	3300031744	Soil	RPLIGLIDRLNEAGAEDELRVISKQLTRLSFRAEPLSSGK
Ga0306918_112563941	3300031744	Soil	LLEQTQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0306918_112919801	3300031744	Soil	TPEQLLEQTQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0318494_101573454	3300031751	Soil	RSVPAGASEQLFDLTQEHIRPLIGLIDRLNEVGAEDELGVIAKQLTRLVYRAQPLPLVE
Ga0318509_104165721	3300031768	Soil	PLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0318521_104359481	3300031770	Soil	IGLIDRLNEAGAEDELRVISKQLTRLSFRAEPLSSGK
Ga0318521_104695071	3300031770	Soil	LTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPPPSGK
Ga0318547_106861002	3300031781	Soil	LELTQEHIRPLIAMIDRLNEAGAEDELRVVTKQLTRLVFRAQPLPSGK
Ga0318547_108180561	3300031781	Soil	VPAGASEQLFDLTQEHIRPLIGLIDRLNEVGAEDELGVIAKQLTRLVYRAQPLPLVE
Ga0318547_109476412	3300031781	Soil	QTPEQLLEQAQEHIRPLIGVIDRLNEADAEDELRVINKQLTRLCFRVQPLPRSK
Ga0318529_101244131	3300031792	Soil	IGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0318548_101641911	3300031793	Soil	LLELAQKYIRPLIEVIDRLNEAGAEDELSVISKQLTRLSFRVQPLPSDK
Ga0318548_105054451	3300031793	Soil	LELTQEHIRPLIGLIDRLNDAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0318523_104441221	3300031798	Soil	ETPERLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0310917_102430101	3300031833	Soil	LIGLIDRLNDAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0310917_104495711	3300031833	Soil	PLIGLIDRLNEANAEDELRVINRQLARLCFRVQPLPSD
Ga0310917_108117052	3300031833	Soil	TPERLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0310917_109208872	3300031833	Soil	PEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0306925_101444456	3300031890	Soil	LIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0306925_111433621	3300031890	Soil	VIDRLNEADAEDELRVISKQLTRLSFRVQPFSSDR
Ga0306925_113037872	3300031890	Soil	AQTPEQLLEQTQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0306925_119965851	3300031890	Soil	GVIDRLNEADAEDELRVISKQLTRLSFRVQPLSSDK
Ga0306925_120983762	3300031890	Soil	LEQTQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0306925_121041151	3300031890	Soil	TQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0318536_104044922	3300031893	Soil	LLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRAEPLSSGK
Ga0318522_102062101	3300031894	Soil	FDLTQEHIRPLIGLIDRLNEVGAEDELGVVAKQLTRLVYRAQPLPLVE
Ga0306923_114997031	3300031910	Soil	SEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFKAQPPPSGK
Ga0306921_102679211	3300031912	Soil	RLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRAEPLSSGK
Ga0306921_104945163	3300031912	Soil	QEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFKAQPPPSGK
Ga0306921_105220642	3300031912	Soil	MARAEMIDRLNEADAEDELRVINKQLTRLCFRVQPLPRGK
Ga0310912_108193131	3300031941	Soil	LIGLIDRLNEAGAEDELRVISKQLTRLSFRAEPLSSGK
Ga0310916_104086121	3300031942	Soil	EHIRPLIGLIDRLNDAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0310916_108763253	3300031942	Soil	LIDRLGEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0310913_101043235	3300031945	Soil	QAQEHIRPLIGLIDRLNEANAEDELRVINRQLARLCFRVQPLPSD
Ga0310913_104296432	3300031945	Soil	IEVIDRLNEAGAEDELRVISKQLTRLSFRVQPLPSDK
Ga0310913_106018503	3300031945	Soil	IRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPIGK
Ga0310910_101873611	3300031946	Soil	SEQLFDLTQEHIRPLIGLIDRLNEVGAEDELGVVAKQLTRLVYRAQPLPLVE
Ga0310910_105681883	3300031946	Soil	RPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPPPSGK
Ga0310910_111168041	3300031946	Soil	SEQLFDLTQEHIRPLIGLIDRLNEVGAEDELGVIAKQLTRLVYRAQPLPLVE
Ga0310909_101736971	3300031947	Soil	EHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0306926_101690495	3300031954	Soil	GLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPIGK
Ga0306926_102361871	3300031954	Soil	EQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFKAQPPPSGK
Ga0306926_102449506	3300031954	Soil	AQTPEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0318530_105103091	3300031959	Soil	VPAQTPEQLLEQAQEHIRPLIGVIDRLNEADAEDELRVINKQLTRLCFRVQPLPRSK
Ga0306922_101230621	3300032001	Soil	HIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPIGK
Ga0306922_101433651	3300032001	Soil	ELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRAEPLSSGK
Ga0306922_113822612	3300032001	Soil	EQLLEQTQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0310911_107603802	3300032035	Soil	LTQEHIRPLIAMIDRLNEAGAEDELRVISKQLTRLVYRAQLIPTRK
Ga0318559_103599922	3300032039	Soil	AQTPEQLLELSQEHIRPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0318556_104241262	3300032043	Soil	AQEYIRPLIGVIDRLNEANAEDELRVINRQLARLCFRVQPLPSD
Ga0318533_100621265	3300032059	Soil	ELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0318533_108482241	3300032059	Soil	EQLFDLTQEHIRPLIGLIDRLNEVGAEDELRVIAKQLTRLVYRVQPLPLE
Ga0318510_103248972	3300032064	Soil	LLELTQGHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0318513_106218291	3300032065	Soil	PEQLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQLTRLSFRVQPLSSDK
Ga0306924_114328461	3300032076	Soil	MAPEQLFDLTQEHIRPLIGLIDRLNEVSAEDELRVIAKQLTRLVYRAQPLQ
Ga0318525_104660101	3300032089	Soil	RPLIGMIDRLNEAGAEDELRVITRQLTRLVFRAQPLPSGK
Ga0318518_105086431	3300032090	Soil	EQLLELTQEHIRPLIAMIDRLNEAGAEDELRVISKQLTRLVYRAQLIPTRK
Ga0318540_100431915	3300032094	Soil	LIDRLSEAGAEDELRVISKQLTRLSFRAQPLPSGK
Ga0310914_114871872	3300033289	Soil	ELTQEHIRPLIGLIDRLSEAGAEDELRVISKQLTRLSFRAQPPPSGK
Ga0310914_118612722	3300033289	Soil	PARIPEQLFELTQEHIRPLIGLIDRLNEVGAEDELRVISKQLTRLVYRAQPLPSEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F028647

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences