Metagenome / Metatranscriptome Family F028953

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F028953
Family Type	Metagenome / Metatranscriptome
Number of Sequences	190
Average Sequence Length	39 residues
Representative Sequence	MSVILTFASKWVRWYRVLRYAKAFSFFASVRYGLWLARS
Number of Associated Samples	134
Number of Associated Scaffolds	190

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.60 %
% of genes near scaffold ends (potentially truncated)	24.21 %
% of genes from short scaffolds (< 2000 bps)	59.47 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.263 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.526 % of family members)
Environment Ontology (ENVO)	Unclassified (45.263 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.053 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.73% β-sheet: 0.00% Coil/Unstructured: 46.27%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 190 Family Scaffolds
PF02954	HTH_8	28.95
PF08281	Sigma70_r4_2	9.47
PF13581	HATPase_c_2	8.42
PF04542	Sigma70_r2	6.32
PF00158	Sigma54_activat	3.16
PF13590	DUF4136	3.16
PF13185	GAF_2	2.63
PF13620	CarboxypepD_reg	1.58
PF13419	HAD_2	1.58
PF00589	Phage_integrase	1.05
PF02321	OEP	1.05
PF10431	ClpB_D2-small	1.05
PF00072	Response_reg	0.53
PF00582	Usp	0.53
PF00196	GerE	0.53
PF01564	Spermine_synth	0.53
PF03551	PadR	0.53
PF05598	DUF772	0.53
PF00440	TetR_N	0.53
PF10677	DUF2490	0.53
PF07944	Glyco_hydro_127	0.53
PF13701	DDE_Tnp_1_4	0.53
PF00378	ECH_1	0.53
PF01850	PIN	0.53
PF01381	HTH_3	0.53
PF12645	HTH_16	0.53
PF09424	YqeY	0.53
PF11026	DUF2721	0.53
PF07730	HisKA_3	0.53
PF04366	Ysc84	0.53
PF00884	Sulfatase	0.53
PF08530	PepX_C	0.53
PF01047	MarR	0.53
PF13492	GAF_3	0.53

COG ID	Name	Functional Category	% Frequency in 190 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	6.32
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	6.32
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	6.32
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	6.32
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	2.11
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.53
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.53
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.53
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.53
COG2936	Predicted acyl esterase	General function prediction only [R]	0.53
COG3533	Beta-L-arabinofuranosidase, GH127 family	Carbohydrate transport and metabolism [G]	0.53
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.53
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.53
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.53
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.26 %
Unclassified	root	N/A	14.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.26 %
Unclassified	root	N/A	14.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.26 %
Unclassified	root	N/A	14.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.42 %
Unclassified	root	N/A	14.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.63 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.74 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.74 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.05 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.53 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.05 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.53 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.05 %
Pseudomonas sp. GW460-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW460-13	0.53 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.53 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01AYWKI	Not Available	504	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105429585	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300000789\|JGI1027J11758_11762659	Not Available	519	Open in IMG/M
3300001471\|JGI12712J15308_10218257	Not Available	504	Open in IMG/M
3300001593\|JGI12635J15846_10068960	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300002245\|JGIcombinedJ26739_100082762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2982	Open in IMG/M
3300002245\|JGIcombinedJ26739_100152435	All Organisms → cellular organisms → Bacteria → Acidobacteria	2184	Open in IMG/M
3300002245\|JGIcombinedJ26739_100515221	Not Available	1073	Open in IMG/M
3300003218\|JGI26339J46600_10009845	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300003351\|JGI26346J50198_1000143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3729	Open in IMG/M
3300004080\|Ga0062385_10174946	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300004152\|Ga0062386_100614059	Not Available	889	Open in IMG/M
3300004152\|Ga0062386_100986092	Not Available	698	Open in IMG/M
3300004633\|Ga0066395_10388281	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300004635\|Ga0062388_100485987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300005332\|Ga0066388_100576212	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300005332\|Ga0066388_101449920	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005332\|Ga0066388_101789870	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005332\|Ga0066388_102142604	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005332\|Ga0066388_102325165	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005343\|Ga0070687_100156110	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300005437\|Ga0070710_10118854	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300005437\|Ga0070710_11398706	Not Available	523	Open in IMG/M
3300005467\|Ga0070706_101038284	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005537\|Ga0070730_10003248	All Organisms → cellular organisms → Bacteria	14643	Open in IMG/M
3300005602\|Ga0070762_10014238	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300005764\|Ga0066903_100991752	All Organisms → cellular organisms → Bacteria → Acidobacteria	1534	Open in IMG/M
3300006041\|Ga0075023_100196879	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006047\|Ga0075024_100847205	Not Available	515	Open in IMG/M
3300006059\|Ga0075017_100991858	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300006059\|Ga0075017_101060805	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300006059\|Ga0075017_101437693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300006163\|Ga0070715_10411226	Not Available	754	Open in IMG/M
3300006172\|Ga0075018_10065830	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300006173\|Ga0070716_100190528	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300006174\|Ga0075014_100842932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300006175\|Ga0070712_100154716	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300006176\|Ga0070765_100482742	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300006852\|Ga0075433_10423666	Not Available	1174	Open in IMG/M
3300009698\|Ga0116216_10987513	Not Available	503	Open in IMG/M
3300009792\|Ga0126374_10664562	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300010048\|Ga0126373_10005034	All Organisms → cellular organisms → Bacteria	10200	Open in IMG/M
3300010048\|Ga0126373_10110875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	2552	Open in IMG/M
3300010048\|Ga0126373_12309802	Not Available	598	Open in IMG/M
3300010339\|Ga0074046_10000375	All Organisms → cellular organisms → Bacteria	40506	Open in IMG/M
3300010339\|Ga0074046_10031249	All Organisms → cellular organisms → Bacteria	3632	Open in IMG/M
3300010339\|Ga0074046_10052953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2690	Open in IMG/M
3300010339\|Ga0074046_10102541	All Organisms → cellular organisms → Bacteria → Acidobacteria	1846	Open in IMG/M
3300010341\|Ga0074045_10006316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10198	Open in IMG/M
3300010341\|Ga0074045_10009783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8010	Open in IMG/M
3300010341\|Ga0074045_10010551	All Organisms → cellular organisms → Bacteria	7655	Open in IMG/M
3300010341\|Ga0074045_10056608	All Organisms → cellular organisms → Bacteria → Acidobacteria	2816	Open in IMG/M
3300010343\|Ga0074044_10004804	All Organisms → cellular organisms → Bacteria	11120	Open in IMG/M
3300010343\|Ga0074044_10112733	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300010361\|Ga0126378_11786228	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010376\|Ga0126381_100075009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4234	Open in IMG/M
3300010376\|Ga0126381_100081727	All Organisms → cellular organisms → Bacteria	4067	Open in IMG/M
3300010376\|Ga0126381_100278352	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300010376\|Ga0126381_100355341	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300010376\|Ga0126381_101680967	Not Available	917	Open in IMG/M
3300010379\|Ga0136449_100024459	All Organisms → cellular organisms → Bacteria → Acidobacteria	15072	Open in IMG/M
3300010398\|Ga0126383_10483065	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300010880\|Ga0126350_11103920	Not Available	1161	Open in IMG/M
3300012971\|Ga0126369_11428379	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300014164\|Ga0181532_10114081	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300016294\|Ga0182041_10631698	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300017822\|Ga0187802_10010740	All Organisms → cellular organisms → Bacteria → Acidobacteria	2952	Open in IMG/M
3300017822\|Ga0187802_10023102	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300017926\|Ga0187807_1131629	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300017933\|Ga0187801_10021466	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300017933\|Ga0187801_10371418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300017942\|Ga0187808_10408402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300017955\|Ga0187817_10145053	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300017955\|Ga0187817_10260273	Not Available	1105	Open in IMG/M
3300017959\|Ga0187779_10044590	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300017972\|Ga0187781_10029134	All Organisms → cellular organisms → Bacteria	3815	Open in IMG/M
3300017975\|Ga0187782_11521214	Not Available	527	Open in IMG/M
3300018006\|Ga0187804_10425736	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300018088\|Ga0187771_10146080	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300019887\|Ga0193729_1035598	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300020580\|Ga0210403_10141262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW460-13	1966	Open in IMG/M
3300020580\|Ga0210403_10313319	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300020580\|Ga0210403_10594923	Not Available	894	Open in IMG/M
3300020581\|Ga0210399_10046577	All Organisms → cellular organisms → Bacteria	3479	Open in IMG/M
3300020581\|Ga0210399_10059308	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300020583\|Ga0210401_10138248	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300020583\|Ga0210401_11531871	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300021168\|Ga0210406_10001149	All Organisms → cellular organisms → Bacteria	33515	Open in IMG/M
3300021168\|Ga0210406_10064386	All Organisms → cellular organisms → Bacteria	3169	Open in IMG/M
3300021170\|Ga0210400_10000207	All Organisms → cellular organisms → Bacteria	74783	Open in IMG/M
3300021171\|Ga0210405_10004786	All Organisms → cellular organisms → Bacteria	12581	Open in IMG/M
3300021181\|Ga0210388_10251045	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300021401\|Ga0210393_10071940	All Organisms → cellular organisms → Bacteria	2730	Open in IMG/M
3300021407\|Ga0210383_10437904	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300021407\|Ga0210383_11623356	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300021432\|Ga0210384_10011133	All Organisms → cellular organisms → Bacteria	9121	Open in IMG/M
3300021433\|Ga0210391_10237411	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300021444\|Ga0213878_10329284	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300021474\|Ga0210390_10325083	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300021478\|Ga0210402_10011326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7700	Open in IMG/M
3300021478\|Ga0210402_10213794	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300021478\|Ga0210402_10463822	Not Available	1176	Open in IMG/M
3300021479\|Ga0210410_10058012	All Organisms → cellular organisms → Bacteria	3378	Open in IMG/M
3300021559\|Ga0210409_10033230	All Organisms → cellular organisms → Bacteria → Acidobacteria	4944	Open in IMG/M
3300021560\|Ga0126371_10058475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3710	Open in IMG/M
3300021560\|Ga0126371_10163846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2295	Open in IMG/M
3300021560\|Ga0126371_10515168	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300021560\|Ga0126371_10550162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1303	Open in IMG/M
3300021560\|Ga0126371_11669599	Not Available	762	Open in IMG/M
3300021560\|Ga0126371_11989844	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300021560\|Ga0126371_12771219	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300025910\|Ga0207684_11283029	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300025939\|Ga0207665_11143672	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300025941\|Ga0207711_10078742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2876	Open in IMG/M
3300026088\|Ga0207641_10023889	All Organisms → cellular organisms → Bacteria → Acidobacteria	5040	Open in IMG/M
3300026845\|Ga0207760_100807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2978	Open in IMG/M
3300026845\|Ga0207760_103200	All Organisms → cellular organisms → Bacteria → Acidobacteria	1432	Open in IMG/M
3300026872\|Ga0207785_1008199	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300026876\|Ga0207837_1015061	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300026959\|Ga0207852_1006280	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300026959\|Ga0207852_1010670	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300027502\|Ga0209622_1007372	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300027583\|Ga0209527_1000049	All Organisms → cellular organisms → Bacteria → Acidobacteria	22537	Open in IMG/M
3300027635\|Ga0209625_1001635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	5203	Open in IMG/M
3300027698\|Ga0209446_1000200	All Organisms → cellular organisms → Bacteria	14400	Open in IMG/M
3300027698\|Ga0209446_1022119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1581	Open in IMG/M
3300027727\|Ga0209328_10036750	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300027812\|Ga0209656_10024895	All Organisms → cellular organisms → Bacteria	3616	Open in IMG/M
3300027812\|Ga0209656_10117850	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300027824\|Ga0209040_10008181	All Organisms → cellular organisms → Bacteria	7471	Open in IMG/M
3300027824\|Ga0209040_10075210	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300027824\|Ga0209040_10394448	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300027825\|Ga0209039_10001053	All Organisms → cellular organisms → Bacteria	26797	Open in IMG/M
3300027857\|Ga0209166_10004289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10023	Open in IMG/M
3300027884\|Ga0209275_10009787	All Organisms → cellular organisms → Bacteria	4075	Open in IMG/M
3300028047\|Ga0209526_10336673	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300030847\|Ga0075405_11083403	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300030991\|Ga0073994_12416671	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031057\|Ga0170834_100448602	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300031057\|Ga0170834_103147521	All Organisms → cellular organisms → Bacteria	11547	Open in IMG/M
3300031057\|Ga0170834_110357933	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300031231\|Ga0170824_101293039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6821	Open in IMG/M
3300031231\|Ga0170824_114429517	Not Available	1344	Open in IMG/M
3300031474\|Ga0170818_101536294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8435	Open in IMG/M
3300031543\|Ga0318516_10596649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300031545\|Ga0318541_10193063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1126	Open in IMG/M
3300031573\|Ga0310915_10316241	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300031573\|Ga0310915_10476186	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031680\|Ga0318574_10423615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	778	Open in IMG/M
3300031708\|Ga0310686_101572528	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300031719\|Ga0306917_10504383	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300031744\|Ga0306918_11566615	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300031753\|Ga0307477_10041832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3147	Open in IMG/M
3300031753\|Ga0307477_10061149	All Organisms → cellular organisms → Bacteria	2595	Open in IMG/M
3300031754\|Ga0307475_10044719	All Organisms → cellular organisms → Bacteria	3297	Open in IMG/M
3300031754\|Ga0307475_10746881	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031777\|Ga0318543_10020824	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300031796\|Ga0318576_10263618	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300031797\|Ga0318550_10512049	Not Available	579	Open in IMG/M
3300031845\|Ga0318511_10232993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	824	Open in IMG/M
3300031879\|Ga0306919_10496437	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031890\|Ga0306925_10086104	All Organisms → cellular organisms → Bacteria	3331	Open in IMG/M
3300031894\|Ga0318522_10107640	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300031912\|Ga0306921_12718789	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300032055\|Ga0318575_10396237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	701	Open in IMG/M
3300032063\|Ga0318504_10435693	Not Available	626	Open in IMG/M
3300032076\|Ga0306924_12078744	Not Available	583	Open in IMG/M
3300032094\|Ga0318540_10016342	All Organisms → cellular organisms → Bacteria	3018	Open in IMG/M
3300032160\|Ga0311301_10018401	All Organisms → cellular organisms → Bacteria → Acidobacteria	20158	Open in IMG/M
3300032160\|Ga0311301_10118508	All Organisms → cellular organisms → Bacteria → Acidobacteria	5010	Open in IMG/M
3300032205\|Ga0307472_100169122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1622	Open in IMG/M
3300032261\|Ga0306920_100329880	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300032770\|Ga0335085_10000186	All Organisms → cellular organisms → Bacteria	194184	Open in IMG/M
3300032782\|Ga0335082_10004278	All Organisms → cellular organisms → Bacteria → Acidobacteria	15556	Open in IMG/M
3300032783\|Ga0335079_10061523	All Organisms → cellular organisms → Bacteria	4280	Open in IMG/M
3300032783\|Ga0335079_10149398	Not Available	2622	Open in IMG/M
3300032828\|Ga0335080_11599086	Not Available	642	Open in IMG/M
3300032829\|Ga0335070_12076155	Not Available	510	Open in IMG/M
3300032892\|Ga0335081_10006384	All Organisms → cellular organisms → Bacteria	18764	Open in IMG/M
3300032898\|Ga0335072_10129824	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300032954\|Ga0335083_10000402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	67348	Open in IMG/M
3300032955\|Ga0335076_11062817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300032955\|Ga0335076_11099629	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300033158\|Ga0335077_11354736	Not Available	688	Open in IMG/M
3300033289\|Ga0310914_10223414	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300033402\|Ga0326728_10000241	All Organisms → cellular organisms → Bacteria	219568	Open in IMG/M
3300033405\|Ga0326727_10194492	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300033405\|Ga0326727_10854736	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300033805\|Ga0314864_0001081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5331	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.42%
Host-Associated	Host-Associated	1.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.11%
Aquatic	Environmental → Aquatic	16.32%
Plants	Host-Associated → Plants	1.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.53%
Freshwater	Environmental → Aquatic → Freshwater	12.63%
Sediment	Environmental → Aquatic → Sediment	3.68%
Peat	Environmental → Terrestrial → Peat	1.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.37%
Loam	Environmental → Terrestrial → Soil → Loam	18.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.37%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.32%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.16%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.11%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.11%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.58%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.05%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.53%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.53%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.53%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.53%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_1099220	2040502001	Soil	DFAFASKWVRWYRVLRYGKGFSFTDSVRQGIWLARS
INPhiseqgaiiFebDRAFT_1054295854	3300000364	Soil	MSMTLMFVRKWVRWSRVLRYGKAFSFVDSMRYGLWLARS*
JGI1027J11758_117626592	3300000789	Soil	MFVILMFARKWVGWYRLLRYRKAFSLASSIRYGLWLA
JGI12712J15308_102182571	3300001471	Forest Soil	MPECAMSQILLFGRKWVEWYRVLRYGKAFIFADSIRYGLWLARG*
JGI12635J15846_100689602	3300001593	Forest Soil	MSVILKFARKWVRWYRVLRYHKAFSFADSVRFGLWLAPG*
JGIcombinedJ26739_1000827622	3300002245	Forest Soil	MSLILRFARTWVRWYRVLRYHKAFSFADSVRYGLWLSLS*
JGIcombinedJ26739_1001524353	3300002245	Forest Soil	VFARKWVRWYRVLRYGKAFSFADSIRHGLWLARG*
JGIcombinedJ26739_1005152211	3300002245	Forest Soil	GGFMSLILVFARKWVGWYRLLRYRKVFSFAASIRYGLWLARG*
JGI26339J46600_100098452	3300003218	Bog Forest Soil	MSMILTFARTWGQWYRVLRCGKGFSFADSVRYGLWLARS*
JGI26346J50198_10001434	3300003351	Bog Forest Soil	MSLILVFARMWVRWYRVLRYDKAFTFVASVRYGLWLARS*
Ga0062385_101749462	3300004080	Bog Forest Soil	MSMILTFAGTWGRWYRVLRYAKAFSFVASVRYGLWLARS*
Ga0062386_1006140592	3300004152	Bog Forest Soil	MSVILMFARKWIRWYRVLRYGKEFSFAASVRYGLWLARG*
Ga0062386_1009860922	3300004152	Bog Forest Soil	MSLILVFARKGVGWYRVPRYSKAFSFTGSIRYGLWLARG*
Ga0066395_103882811	3300004633	Tropical Forest Soil	MSVILTVASKWVRWYRVLRYAKAFSFFASVRYGLWLARS*
Ga0062388_1004859872	3300004635	Bog Forest Soil	MSVIFTFASKWVRWYRVLRYGKGFSLTDSVRHGIWLARS*
Ga0066388_1005762122	3300005332	Tropical Forest Soil	MSVILRFASKWVQWYCVLRYAKAFSFFASVRYGLWLARS*
Ga0066388_1014499202	3300005332	Tropical Forest Soil	MSVILTVASRWVRWYRVLRYAKAFSFFASVRYGLWLARS*
Ga0066388_1017898702	3300005332	Tropical Forest Soil	MSVILTFASKWVRWYGVLRYAKALSFFASVRYGLWLARS*
Ga0066388_1021426042	3300005332	Tropical Forest Soil	MSLILTFPRKWVRGYRVLRRGYGFSFFDSVRHGLWLARG*
Ga0066388_1023251652	3300005332	Tropical Forest Soil	MSRILVLVRKWNTYYRVLRHGKGFSFVDSLRHGLWLARG*
Ga0070687_1001561102	3300005343	Switchgrass Rhizosphere	MSLILTFARKWVRWYRLLRCHKAFSFADSVRYGLWLSLS*
Ga0070710_101188541	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MFVILMFVRKWVGWYRVLRYRKAFSLADSIRCGLCLARG*
Ga0070710_113987062	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSVILTFARKWVRWHRVLRYHKAFSFADSVRYGVWLSLS*
Ga0070706_1010382841	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSVTFMFVRKWVRWYRVLRYGKAFSFVDSMDCGLWLARG*
Ga0070730_1000324811	3300005537	Surface Soil	MSLIFTFASKWVRWYRVLRYGKGFSFTDAVRHGIWLARS*
Ga0070762_100142383	3300005602	Soil	LGDVMSVILKFAKWVRWYRVLRYRKAFSFADSVRFGLWLSLS*
Ga0066903_1009917521	3300005764	Tropical Forest Soil	MSVILTFASKWVRWYRVLRYAKAFSFFASVRYGLWLARS*
Ga0075023_1001968792	3300006041	Watersheds	MSLILIFARTWVRWYRVLRYHKAFSFADSVRFGLWLSLS*
Ga0075024_1008472052	3300006047	Watersheds	MFVILMFVRKWVGWYRLLRYRKAFSLANSIRYGLWLARG*
Ga0075017_1009918581	3300006059	Watersheds	MFVILMFAHKWVGWYRVLRYRKAFSLANSIRYGLWLARG*
Ga0075017_1010608052	3300006059	Watersheds	MSLTFMFVRKWVRWYRVLRYAKAFRFVDSMRYGLWLARS*
Ga0075017_1014376931	3300006059	Watersheds	MSMILTFARTWGRWYRVLRYGKGFGFADSVRYGLWLARS*
Ga0070715_104112261	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSMTLMFVRKWVRWSRVLRYGKAFGFVDSMRYGLWLARS*
Ga0075018_100658304	3300006172	Watersheds	MSFILMFARKWVQWHRVLRYGKEFSFAHSIQYGLWLTRG*
Ga0070716_1001905283	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSLILIFARTWVRWYRVLRYHKAFSFADSVRYGLWLSLS*
Ga0075014_1008429322	3300006174	Watersheds	MSVTFMFVRKWVRWYRVLRYGKAFSFVDSMRCGLWLARG*
Ga0070712_1001547165	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSLILALVRKWAGWYRVLRYGKAFSFVDSIRYDLWLARG*
Ga0070765_1004827422	3300006176	Soil	MTLILIFARTWVRWYRVLRYHKAFSFADSVRYGLWLSLS*
Ga0075433_104236661	3300006852	Populus Rhizosphere	MSRILSFVRMWGRWYGVLRHGKDFSIADSVRYSLWLARS*
Ga0116216_109875131	3300009698	Peatlands Soil	MSVTLTFVHKWVRWYRVLRYGKAFSFVDSMRYGLW
Ga0126374_106645622	3300009792	Tropical Forest Soil	MSNILSFARTWARWYGVLRYAKEFSFADSVRYGLWLARS*
Ga0126373_100050347	3300010048	Tropical Forest Soil	MSVILTFTSKWVRWYYVLRYAKALSFFASVRYGLWLARS*
Ga0126373_101108753	3300010048	Tropical Forest Soil	MSLILTFARKWVRGYRVLRRGNGFSFFDSVRHGLWLARG*
Ga0126373_123098022	3300010048	Tropical Forest Soil	MSVSLTFASKWVRWYGVLRYAKAFSFVDSVRYGLWLARG*
Ga0074046_100003759	3300010339	Bog Forest Soil	MSLILAFARKWVGWYRVLRYRKAFSFADSIRYGLWLARG*
Ga0074046_100312493	3300010339	Bog Forest Soil	MSMIFTFASKWVRWYRVLRYGKGFSFTDSVRHGIWLACS*
Ga0074046_100529532	3300010339	Bog Forest Soil	MSMILTFARTWGRWYRVLRYGKGFSFADSVRYGLWLARS*
Ga0074046_101025411	3300010339	Bog Forest Soil	MILTFAHTWGRWYRVLRYGKGFSFGDSVRYGLWLARS*
Ga0074045_1000631611	3300010341	Bog Forest Soil	MSVTFMFVRKWVRVLRYGKAFSFVDSMRCGLWLARG*
Ga0074045_100097832	3300010341	Bog Forest Soil	MSMILTFAHTWGRWYRVLRYGKGFSFGDSVRYGLWLARS*
Ga0074045_100105513	3300010341	Bog Forest Soil	MSVILTFASKWVRWYGVLRYAKAFSLVDSVRYGLWLARS*
Ga0074045_100566083	3300010341	Bog Forest Soil	MSIILRFARTWARWYGVLRYSKAFSFADSVRFGLWLARG*
Ga0074044_100048049	3300010343	Bog Forest Soil	MSMILTLARTWGQWYRVLRYGKGFSFPDSVRYGLWLARS*
Ga0074044_101127333	3300010343	Bog Forest Soil	MSLILVFARKWVRCYRVLRYDKAFTFVASVRYGLWLARS*
Ga0126378_117862282	3300010361	Tropical Forest Soil	MSLILTFTTKWLRWYRVLRYAKAFSFFASVRYGLWLARS
Ga0126381_1000750094	3300010376	Tropical Forest Soil	MSLIFTLARKWVRGYRVLRRGNGFSFFDSVRHGLWLARG*
Ga0126381_1000817274	3300010376	Tropical Forest Soil	MAMILTFARTWGRWYRVLRYGKGFSFADSVRYGLWLAQS*
Ga0126381_1002783523	3300010376	Tropical Forest Soil	MSKILSFARTWARWYAVLRNAKAFSFADSVRYGLWLALS*
Ga0126381_1003553412	3300010376	Tropical Forest Soil	MSVILTFASKWVRWYRVLRYAKAFSFFASLRYGLWLARS*
Ga0126381_1016809671	3300010376	Tropical Forest Soil	ILRFASKWVQWYCVLRYAKAFSFFASVRYGLWLARS*
Ga0136449_10002445913	3300010379	Peatlands Soil	MSVTLTFVHKWVRWYRVLRYGKAFSFVDSMRYGLWLARS*
Ga0126383_104830653	3300010398	Tropical Forest Soil	NILSFARTWARWYGVLRYAKAFSFADSVRYGLWLARS*
Ga0126350_111039202	3300010880	Boreal Forest Soil	MSVILKFARKWVRWYCVLRYHKAFSFADSVRFGLWLSLS*
Ga0126369_114283791	3300012971	Tropical Forest Soil	MSLILTFTTKWVRWYRVLRYAKAFSFFASVRYGLWLARS*
Ga0181532_101140813	3300014164	Bog	MSVTLMFVRKWVRWYRVLRYGKAFSFVDSMRYGLWLARG*
Ga0182041_106316982	3300016294	Soil	LTFARTWGRWYRVLRYGKGFSFADSVRYGLWLAQR
Ga0187802_100107405	3300017822	Freshwater Sediment	MSLTLMFVRKWVRWYRVLRYGKAFSFVDSMRYGLWLARG
Ga0187802_100231021	3300017822	Freshwater Sediment	MSVILMFARKWVRWYRVLRYGKAFSFVDSMRYGLWLARG
Ga0187807_11316292	3300017926	Freshwater Sediment	MSVILMFTRKWARWYRVLRYGKAFSFVDSMRYGLWLARG
Ga0187801_100214664	3300017933	Freshwater Sediment	SVILMFARKWVGWYRVLRYGKAFSFADSVRYGLWLARS
Ga0187801_103714182	3300017933	Freshwater Sediment	MILTFTRTWGRWYRVLRCEKGFSFADSVRYGLWLARS
Ga0187808_104084021	3300017942	Freshwater Sediment	MSLTLMFVRKWVRWYRVLRYGKAFSFVDSMRYGLW
Ga0187817_101450532	3300017955	Freshwater Sediment	MSLILRFARTWAGWYGVLRYSKAFSFADSVRYGLWLARS
Ga0187817_102602731	3300017955	Freshwater Sediment	MSIILRFARTWARWYGVLRYSKAFSFADSVRYGLWLAR
Ga0187779_100445904	3300017959	Tropical Peatland	MSGILTFVRKWVQWYRVLRYAKAFHFVASVRCGLWLARS
Ga0187781_100291342	3300017972	Tropical Peatland	MPVILTFASKWVRWYGVLRYAKEFSFADSVRYGLWLARS
Ga0187782_115212141	3300017975	Tropical Peatland	MSGILTFVRKWVQWYRVLRYAKAFHFVASVRCGLWLA
Ga0187804_104257362	3300018006	Freshwater Sediment	SGVWEISVLGTFASKWARWYRVLRYAKAFSCGAFVRYGLWLARS
Ga0187771_101460802	3300018088	Tropical Peatland	MSVILTLAGKWVRWHQVLRYDKAFGFVDSVRHGLWLARSL
Ga0193729_10355982	3300019887	Soil	MSLILVFACKWVGWYRLLRYRKAFSFADSIRFGLWLARG
Ga0210403_101412623	3300020580	Soil	MSLIFTFASKWVRWYRVLRYGKGFSFTDSMRHGIWLARS
Ga0210403_103133192	3300020580	Soil	DAMSLILIFARTWVRWYLVLRYHKAFSFADSVRYGLWLSLSYFPSQI
Ga0210403_105949232	3300020580	Soil	MSLILALVRKWVGWYRVLRYDKAFSFVDSIRYGLWLARG
Ga0210399_100465771	3300020581	Soil	MSVIFTFASKWVRWYRVLRYGKGFSFTDSVRHGIWLARS
Ga0210399_100593084	3300020581	Soil	MSLILALVRKWVGWYRVLRYGKAFSFVDSIRYGLWLARG
Ga0210401_101382483	3300020583	Soil	MTLILTFARKWVRWYSVLRYHNAFSFADSVRYGLWLSLS
Ga0210401_115318711	3300020583	Soil	LGRVMSLILLFGRKWVDWYRVLRYGRAFRFPDSIRYGLWLARE
Ga0210406_1000114922	3300021168	Soil	MSLIFTFASKSVRWYRVLRYGKGFSFTDSVRHGIWLARS
Ga0210406_100643862	3300021168	Soil	MLLILTFARKWVRWYRVLRYHKAFSFADSVRYGLWLARG
Ga0210400_1000020712	3300021170	Soil	MSLVFTFAGKWARWYRVLRYGKGFSFTDSVRHGIWLARS
Ga0210405_100047869	3300021171	Soil	MSLILVFVRKWVGWYRLLRYRKAFSFADSIRFGLWLARG
Ga0210388_102510453	3300021181	Soil	MSVIFRFAPKWVRWYGVLRYHKAFSFADSVRFGLWLSLS
Ga0210393_100719403	3300021401	Soil	MSVILKFARKWVRWYRVLRYHKAFSFADSVRFGLWLSLS
Ga0210383_104379043	3300021407	Soil	MSVILKFARKWVRWYRVLRYHKAFSFADSVRFGLW
Ga0210383_116233562	3300021407	Soil	GDVMSVILKFARKWVRWYRVLRYRKAFSFADSVRFGLWLSLS
Ga0210384_1001113315	3300021432	Soil	MSVIVTVARKWVRWYRVLRYHKAFSFGDSVRYGLWLSLS
Ga0210391_102374111	3300021433	Soil	GRVMSLILLLGRKWVDWYRVLRYGKAFSFADSSRYGLWRARG
Ga0213878_103292842	3300021444	Bulk Soil	MSVILTLASKWVRWYGVLRHAKEFSFVDSVRYGLWLARG
Ga0210390_103250831	3300021474	Soil	RFLGDVMSLILTFARKWVRWYRVLRYHKAFSFADSVRFGLWLSLS
Ga0210402_100113267	3300021478	Soil	MSLILALVRKWVGWYCVLRYGKAFSFVDSIWYGMWLARG
Ga0210402_102137942	3300021478	Soil	MSLFLTFARKGVRWYRVLRYHKAFSFADSVRYGLWLSLS
Ga0210402_104638222	3300021478	Soil	MSVILKFARKWVRGYRVLRYHKAFSFADSVRFGLWLSLS
Ga0210410_100580123	3300021479	Soil	MSVILKFACKWVRWYRVLRYHKAFSFADSVRFGLWLSLS
Ga0210409_100332303	3300021559	Soil	MSLILIFARTCVRWNRVLRYHKAFSFADSVRYVLWLSLS
Ga0126371_100584754	3300021560	Tropical Forest Soil	MTLLLRFAGKWVRWYRVLRYAKAFSLFGSVRYGLWLARG
Ga0126371_101638463	3300021560	Tropical Forest Soil	MSLILTFARKWVRGYRVLRRGNGFSFFDSVRHGLWLARG
Ga0126371_105151682	3300021560	Tropical Forest Soil	MSLILTFASKWVRWYRVLRYAKAFSLFASVRYGLWLARS
Ga0126371_105501622	3300021560	Tropical Forest Soil	MSVILTFASKWVRWYRVLRYAKAFSFFASVRYGLWLARS
Ga0126371_116695991	3300021560	Tropical Forest Soil	ILRFASKWVQWYCVLRYAKAFSFFASVRYGLWLARS
Ga0126371_119898441	3300021560	Tropical Forest Soil	VSLTFASKWVRWYGVLRYAKAFSFVDSVRYGLWLARG
Ga0126371_127712191	3300021560	Tropical Forest Soil	MSVILTVASRWVRWYRVLRYAKAFSFFASVRYGLWLARS
Ga0207684_112830291	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TFMFVRKWVRWYRVLRYGKAFSFVDSMDCGLWLARG
Ga0207665_111436722	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSVTFMFVRKWVRWYRVLRYGKAFSFVDSMDCGLRLARG
Ga0207711_100787425	3300025941	Switchgrass Rhizosphere	MSLILTFARKWVRWYRLLRCHKAFSFADSVRYGLWLSLS
Ga0207641_100238891	3300026088	Switchgrass Rhizosphere	MSLILTFARKWVRWYRLLRCHKAFSFADSVRYGLWL
Ga0207723_1134921	3300026824	Tropical Forest Soil	MSGILILARKRVRSYRVLRYAKAFDFVASVRYGQRL
Ga0207760_1008072	3300026845	Tropical Forest Soil	MSTIFAFATNWLRWYRVLRYAKAFSLVASVRFGLWLARS
Ga0207760_1032003	3300026845	Tropical Forest Soil	MSVILTLASKWVRWYGVLRYAKEFSFVASVRYGLWLARS
Ga0207785_10081991	3300026872	Tropical Forest Soil	MSTIFAFATNWLRWYRVLRYAKAFSLVASVRFGLWLA
Ga0207837_10150612	3300026876	Tropical Forest Soil	MSVILTLASKWVRWYGVLRYAKEFSFVASVRYGQRLAGS
Ga0207852_10062802	3300026959	Tropical Forest Soil	MSVILTCANKWIRWYGVLRYVKAFSFVDFVRYGLWLARG
Ga0207852_10106702	3300026959	Tropical Forest Soil	MSVILTLASKWVRWYGVLRYTKEFSFVDSVRYGLWLAR
Ga0209622_10073723	3300027502	Forest Soil	MSLIFTFANKWVGWYRVLRYRKGLNFADSIRYGLWLARG
Ga0209527_100004915	3300027583	Forest Soil	MSLILRFARTWVRWYRVLRYHKAFSFADSVRYGLWLSLS
Ga0209625_10016353	3300027635	Forest Soil	MSLILRFARTWVRWYRVLRYHKAFSFVDSVRYGLWLSLS
Ga0209446_100020012	3300027698	Bog Forest Soil	MSLILVFARMWVRWYRVLRYDKAFTFVASVRYGLWLARS
Ga0209446_10221191	3300027698	Bog Forest Soil	MSVTFMFVRKWVRWYRVLRYGKAFSFVDSMRCGLWLARG
Ga0209328_100367502	3300027727	Forest Soil	MSLILVFARKWVGWYRLLRYRKAFSFADSIRFGLWLARG
Ga0209656_100248952	3300027812	Bog Forest Soil	MSMILTFPRTWGRWYRVLRYGKGFSFADSVRYGLWLARS
Ga0209656_101178502	3300027812	Bog Forest Soil	MSLILVFARKWVRCYRVLRYDKAFTFVASVRYGLWLARS
Ga0209040_100081816	3300027824	Bog Forest Soil	MSLILAFARKWVGWYRVLRYRKAFSFADSIRYGLWLARG
Ga0209040_100752102	3300027824	Bog Forest Soil	MSMILTFARTWGRWYRVLRYGKGFSFADSVRYGLWLARS
Ga0209040_103944482	3300027824	Bog Forest Soil	DSHIPRTWGRWYRVLRYGKGFSFADSVRYGLWLARS
Ga0209039_100010536	3300027825	Bog Forest Soil	MILTFARTWGQWYRVLRCGKGFSFADSVRYGLWLARS
Ga0209166_100042897	3300027857	Surface Soil	MSLIFTFASKWVRWYRVLRYGKGFSFTDAVRHGIWLARS
Ga0209275_100097874	3300027884	Soil	MSVILKFAKWVRWYRVLRYRKAFSFADSVRFGLWLSLS
Ga0209526_103366732	3300028047	Forest Soil	MSLILVFARKWAGWYRLLRYRKAFSFADSIRYGLWLARG
Ga0075405_110834031	3300030847	Soil	VMSMTLMFVRKWVRWSRVLRYGKAFGFVDSMRYGLWLARS
Ga0073994_124166711	3300030991	Soil	LILVFAHKWVRWYHVLRYDKAFTFAASVRYGLWLARG
Ga0170834_1004486023	3300031057	Forest Soil	MPMTLMFVRKWVRWSRVLRYGKAFGFVDSMRYGLWLARS
Ga0170834_10314752112	3300031057	Forest Soil	MSRILVFTHKWVRWYRVLRYAKALGFVASLRYGLWLARS
Ga0170834_1103579333	3300031057	Forest Soil	GVMSMILTFARTWGRWYRVLRYGKGFSFADSVRYGLWLAHS
Ga0170824_1012930397	3300031231	Forest Soil	MILTFARTWGRWYRLLRYGKGFSFADSVRYGLWLAHS
Ga0170824_1144295172	3300031231	Forest Soil	MSLILVFARKWARWYRLLRYRKAFTFADSIRYGLWLARG
Ga0170818_1015362948	3300031474	Forest Soil	MILKFACTWGRWYRVLRYGKGFSFADSVRYGLWLAHS
Ga0318516_105966492	3300031543	Soil	MSMILTFAQTRGRWYRVLRYGKGFSFADSVRYGLWLAQS
Ga0318541_101930632	3300031545	Soil	MSVILTFASEWVRWYRVLRYAKALSFFASVRYGLWLARS
Ga0310915_103162412	3300031573	Soil	MSVILTLASKWVRWYAALRYAKEFSLVDSVRYGLWLARS
Ga0310915_104761861	3300031573	Soil	MSVILAFASKWVRWYCVLRYAKAFSFFASVRYGLWLARS
Ga0318574_104236151	3300031680	Soil	VMSVILTVASRWVRWYRVLRYAKAFSFFASVRYGLWLARS
Ga0310686_1015725283	3300031708	Soil	MSLILVFARKWVRWYRVLRYGKAFTFVASVRYGLWLARS
Ga0306917_105043831	3300031719	Soil	MSMILTFARTWGRWYRVRRYGKGFSFADSVRYGLWLAQS
Ga0306918_115666151	3300031744	Soil	SVILTFASEWVRWYRVLRYAKALSFFASVRYGLWLARS
Ga0307477_100418325	3300031753	Hardwood Forest Soil	MSLILIFARTWVRWYRVLRYHKAFSFADSVRYRLWLSLS
Ga0307477_100611492	3300031753	Hardwood Forest Soil	MTLILVFACKWVRWYRVLRYGKAFSFADSIRHGLWLARG
Ga0307475_100447192	3300031754	Hardwood Forest Soil	MSLILVFARKWVGWYRMLRYREAFSFAASIRYGLWLARG
Ga0307475_107468811	3300031754	Hardwood Forest Soil	ATLGVALGGFMSLILVFARKWVGWYRLLRYRQAFSFSASIRYGLWLARG
Ga0318543_100208245	3300031777	Soil	MSVILAFASKWVRWYCVLRHAKAFSFFASVRYGLWLARS
Ga0318576_102636182	3300031796	Soil	MSVILTFASKWVRWYRVLRYAKAFSFFASVRYGLW
Ga0318550_105120491	3300031797	Soil	ILTFASEWVRWYRVLRYAKALSFFASVRYGLWLARS
Ga0318511_102329931	3300031845	Soil	MSLILTFTTKWVRWYRVLRYAKAFSFFASVRYGLWLARS
Ga0306919_104964371	3300031879	Soil	MSNILSFARTWARWYGVLRYAKEFSFADSVRYGLWLARS
Ga0306925_100861045	3300031890	Soil	MSVILTFASKWVRWYCVLRYAKAFSFFASVLWPVAGA
Ga0318522_101076402	3300031894	Soil	MSVILTFASKWVRWYRVLRRAKEFSFVASVRYGLWLARS
Ga0306921_127187891	3300031912	Soil	LSFARTWARWYGVLRYAKSFSFANSVRYGLWLTRS
Ga0318575_103962371	3300032055	Soil	ILTFASEWVRWYRVLRYAKAFSFFASVRYGLWLARS
Ga0318504_104356931	3300032063	Soil	SVILTLASKWVRWYAALRYAKEFSLVDSVRYGLWLARS
Ga0306924_120787442	3300032076	Soil	MFVILMFARKWVGWYRLLRYRKAFSLANSIRYGLWLARG
Ga0318540_100163421	3300032094	Soil	MSVILTVASRWVRWYRVLRYAKAFSFFASVRYGLWLA
Ga0311301_1001840110	3300032160	Peatlands Soil	MSVTLTFVHKWVRWYRVLRYGKAFSFVDSMRYGLWLARS
Ga0311301_101185086	3300032160	Peatlands Soil	MSLILVFARKWVGWYRVLRYRKAFSFADSIRYGLWLARG
Ga0307472_1001691221	3300032205	Hardwood Forest Soil	MSLILRFARTWVRWYRVLRYHKAFSFADSVRYRLWLSL
Ga0306920_1003298803	3300032261	Soil	MSVTFMFVRKWVRWYRVLRYGKAFSFVDSMRCGQWLARG
Ga0335085_10000186123	3300032770	Soil	MSLIFAFVRKWVAWYCVLRYGKTFGFGDSIRYGLWLARG
Ga0335082_100042782	3300032782	Soil	MSTIFEFATNWVRWYRVLRYAKAFSLVASVRFGLWLARS
Ga0335079_100615233	3300032783	Soil	MSLILTFARKWVEWYRVLRYGKAFSFADSIRYGLWLARG
Ga0335079_101493982	3300032783	Soil	MSVILAFASKWVRWYGVLRYSKEFRFVDSVRYGLWLARS
Ga0335080_115990861	3300032828	Soil	GSAGFSGGVMSVILAFASKWVRWYGVLRYSKEFRFVDSVRYGLWLARS
Ga0335070_120761551	3300032829	Soil	MSVILTFASKWVRWYGVLRHAKEFSFVDSVRYGLWLARG
Ga0335081_1000638412	3300032892	Soil	MSTILGFATNWLRWYRVLRYAEAFSLVASVRFGLWLARS
Ga0335072_101298245	3300032898	Soil	MTPMFIRKWVRWYRVLRYGKAFSLVDSMRYGLWLARS
Ga0335083_1000040231	3300032954	Soil	MSLILTFVRKWVAWYCVLRYGKTFGFGDSIRYGLWLARG
Ga0335076_110628171	3300032955	Soil	MSLILVFVRKWVAWYCLLRDEKTFGFADSIRYGLWL
Ga0335076_110996291	3300032955	Soil	MSVILAFASKWVRWYGVLRYSKEFRFIDSVRYGLWLARS
Ga0335077_113547362	3300033158	Soil	MSVILTFASKWVRWYGVLRYAKAFSLVDSVRYGLWLARS
Ga0310914_102234141	3300033289	Soil	MSNILSFARTWARWYGVLRYAKEFSFADSVRYGLW
Ga0326728_10000241180	3300033402	Peat Soil	MSMILTFTRKRGRWYRALRYGKGFSFANFVRYGLGLARS
Ga0326727_101944922	3300033405	Peat Soil	MSVILTFASKWVRWYGVLRYAKEFSFVDSVRYGLWLARS
Ga0326727_108547362	3300033405	Peat Soil	STIFEFATNWLRWYRVLRYAKAFSLVASVRFGLWLARS
Ga0314864_0001081_2508_2627	3300033805	Peatland	MSTILEFATNWLRWYRVLRYAKAFSLIASVRFGLWLARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences