Metagenome / Metatranscriptome Family F029122

Basic Information
Family ID	F029122
Family Type	Metagenome / Metatranscriptome
Number of Sequences	189
Average Sequence Length	38 residues
Representative Sequence	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRP
Number of Associated Samples	175
Number of Associated Scaffolds	189

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.53 %
% of genes near scaffold ends (potentially truncated)	77.25 %
% of genes from short scaffolds (< 2000 bps)	84.66 %
Associated GOLD sequencing projects	164
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (98.942 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (26.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.439 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.57% β-sheet: 0.00% Coil/Unstructured: 91.43%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 189 Family Scaffolds
PF00665	rve	60.32
PF05035	DGOK	1.06
PF07883	Cupin_2	0.53
PF05272	VirE	0.53
PF03626	COX4_pro	0.53
PF13458	Peripla_BP_6	0.53
PF00196	GerE	0.53
PF00547	Urease_gamma	0.53
PF13607	Succ_CoA_lig	0.53
PF08450	SGL	0.53
PF01019	G_glu_transpept	0.53
PF00126	HTH_1	0.53
PF00005	ABC_tran	0.53
PF01610	DDE_Tnp_ISL3	0.53
PF00561	Abhydrolase_1	0.53

COG ID	Name	Functional Category	% Frequency in 189 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	60.32
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	60.32
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	60.32
COG4584	Transposase	Mobilome: prophages, transposons [X]	60.32
COG3734	2-keto-3-deoxy-galactonokinase	Carbohydrate transport and metabolism [G]	1.06
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.53
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.53
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.53
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.53
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.53
COG5545	Predicted P-loop ATPase and inactivated derivatives	Mobilome: prophages, transposons [X]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.94 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.94 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.94 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	98.94 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	97.88 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	71.96 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	62.43 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	59.79 %
Unclassified	root	N/A	1.06 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.06 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.53 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.53 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.06 %
Bradyrhizobium japonicum SEMIA 5079	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	0.53 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.53 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.53 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig56126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1628	Open in IMG/M
3300000712\|JGI11925J11888_100062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1781	Open in IMG/M
3300000901\|JGI12192J12874_100115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1772	Open in IMG/M
3300000907\|JGI11871J12876_100132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1798	Open in IMG/M
3300000956\|JGI10216J12902_101562441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	757	Open in IMG/M
3300001111\|JGI12666J13322_100150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300001120\|JGI12137J13328_100163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1784	Open in IMG/M
3300001137\|JGI12637J13337_1001104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2089	Open in IMG/M
3300001141\|JGI12638J13249_100427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1368	Open in IMG/M
3300001143\|JGI12687J13287_100173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1660	Open in IMG/M
3300001153\|JGI12684J13248_100190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300001154\|JGI12636J13339_1017597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1036	Open in IMG/M
3300001155\|JGI12625J13251_10135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300001159\|JGI12650J13346_1000299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1785	Open in IMG/M
3300001163\|JGI12705J13279_100156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1329	Open in IMG/M
3300001170\|JGI12704J13340_1005112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1270	Open in IMG/M
3300001527\|A3513AW1_1041834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1761	Open in IMG/M
3300001527\|A3513AW1_1161999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1541	Open in IMG/M
3300001545\|JGI12630J15595_10013006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1798	Open in IMG/M
3300001546\|JGI12659J15293_10019712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1784	Open in IMG/M
3300001661\|JGI12053J15887_10033963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2868	Open in IMG/M
3300001661\|JGI12053J15887_10109517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1488	Open in IMG/M
3300001686\|C688J18823_10911643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	558	Open in IMG/M
3300001867\|JGI12627J18819_10029535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2263	Open in IMG/M
3300001867\|JGI12627J18819_10115444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300005552\|Ga0066701_10782713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	569	Open in IMG/M
3300005591\|Ga0070761_10071966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1962	Open in IMG/M
3300005938\|Ga0066795_10085865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300005950\|Ga0066787_10005240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1948	Open in IMG/M
3300005994\|Ga0066789_10000758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13597	Open in IMG/M
3300005994\|Ga0066789_10054441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1748	Open in IMG/M
3300005995\|Ga0066790_10457308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	545	Open in IMG/M
3300006354\|Ga0075021_10355005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300006354\|Ga0075021_10706211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300006574\|Ga0074056_11774729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300006797\|Ga0066659_10150896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1652	Open in IMG/M
3300007076\|Ga0075435_101741477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	547	Open in IMG/M
3300007255\|Ga0099791_10596348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	540	Open in IMG/M
3300007258\|Ga0099793_10009624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3699	Open in IMG/M
3300008885\|Ga0115910_159371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300009093\|Ga0105240_10111904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3302	Open in IMG/M
3300009094\|Ga0111539_11581118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300009098\|Ga0105245_10346871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1470	Open in IMG/M
3300009101\|Ga0105247_11010238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300009147\|Ga0114129_12760688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300009633\|Ga0116129_1211881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	550	Open in IMG/M
3300009661\|Ga0105858_1016232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1977	Open in IMG/M
3300009662\|Ga0105856_1279891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300010039\|Ga0126309_10635243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	677	Open in IMG/M
3300010048\|Ga0126373_13170973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	512	Open in IMG/M
3300011433\|Ga0137443_1234506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300012181\|Ga0153922_1053965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300012202\|Ga0137363_10336932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1246	Open in IMG/M
3300012203\|Ga0137399_10916280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	738	Open in IMG/M
3300012357\|Ga0137384_11064700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	649	Open in IMG/M
3300012361\|Ga0137360_10135909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1930	Open in IMG/M
3300012930\|Ga0137407_11647046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300012944\|Ga0137410_10412586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300014054\|Ga0120135_1001041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2146	Open in IMG/M
3300014829\|Ga0120104_1006968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1984	Open in IMG/M
3300014878\|Ga0180065_1081196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	725	Open in IMG/M
3300015051\|Ga0137414_1101437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	747	Open in IMG/M
3300015051\|Ga0137414_1113681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1184	Open in IMG/M
3300015052\|Ga0137411_1255708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300015054\|Ga0137420_1064353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1779	Open in IMG/M
3300015068\|Ga0167645_118305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	658	Open in IMG/M
3300015080\|Ga0167639_1005337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1907	Open in IMG/M
3300015160\|Ga0167642_1045351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	681	Open in IMG/M
3300015168\|Ga0167631_1007707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1575	Open in IMG/M
3300015206\|Ga0167644_1000232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	60834	Open in IMG/M
3300015241\|Ga0137418_10924792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300015373\|Ga0132257_100620190	Not Available	1338	Open in IMG/M
3300015373\|Ga0132257_104503232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	507	Open in IMG/M
3300017974\|Ga0187777_10369771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	988	Open in IMG/M
3300018027\|Ga0184605_10035560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2074	Open in IMG/M
3300018422\|Ga0190265_10342576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1579	Open in IMG/M
3300018468\|Ga0066662_10114702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1949	Open in IMG/M
3300019869\|Ga0193705_1030274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300019879\|Ga0193723_1142399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300019882\|Ga0193713_1022772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1852	Open in IMG/M
3300019886\|Ga0193727_1032152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1791	Open in IMG/M
3300020004\|Ga0193755_1030758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1777	Open in IMG/M
3300020081\|Ga0206354_11322328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300020140\|Ga0179590_1013978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1790	Open in IMG/M
3300020582\|Ga0210395_10672530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	775	Open in IMG/M
3300020583\|Ga0210401_10230379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1711	Open in IMG/M
3300021086\|Ga0179596_10128863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1183	Open in IMG/M
3300021168\|Ga0210406_10175796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1786	Open in IMG/M
3300021170\|Ga0210400_10075584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2642	Open in IMG/M
3300021171\|Ga0210405_10156206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1806	Open in IMG/M
3300021181\|Ga0210388_10437982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1149	Open in IMG/M
3300021363\|Ga0193699_10057292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1517	Open in IMG/M
3300021405\|Ga0210387_10055969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3186	Open in IMG/M
3300021475\|Ga0210392_10290273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1169	Open in IMG/M
3300021477\|Ga0210398_10165679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1799	Open in IMG/M
3300022561\|Ga0212090_10817252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300023056\|Ga0233357_1001254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1874	Open in IMG/M
3300024330\|Ga0137417_1103020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300024330\|Ga0137417_1280633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1257	Open in IMG/M
3300025509\|Ga0208848_1008317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2143	Open in IMG/M
3300025900\|Ga0207710_10434434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300025905\|Ga0207685_10398986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	705	Open in IMG/M
3300025910\|Ga0207684_10831745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	779	Open in IMG/M
3300025912\|Ga0207707_10205679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1716	Open in IMG/M
3300025921\|Ga0207652_10104750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2502	Open in IMG/M
3300025928\|Ga0207700_10154791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1898	Open in IMG/M
3300025928\|Ga0207700_10507819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1067	Open in IMG/M
3300025944\|Ga0207661_10189631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1801	Open in IMG/M
3300026214\|Ga0209838_1005005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1858	Open in IMG/M
3300026220\|Ga0209855_1008684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1811	Open in IMG/M
3300026221\|Ga0209848_1011296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1779	Open in IMG/M
3300026274\|Ga0209888_1011092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1812	Open in IMG/M
3300026291\|Ga0209890_10012998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3354	Open in IMG/M
3300026291\|Ga0209890_10024010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2365	Open in IMG/M
3300026291\|Ga0209890_10030116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2079	Open in IMG/M
3300026291\|Ga0209890_10141230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	806	Open in IMG/M
3300026294\|Ga0209839_10039585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1748	Open in IMG/M
3300026355\|Ga0257149_1011680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1145	Open in IMG/M
3300026361\|Ga0257176_1000260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3049	Open in IMG/M
3300026369\|Ga0257152_1002550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1799	Open in IMG/M
3300026376\|Ga0257167_1001518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2279	Open in IMG/M
3300026475\|Ga0257147_1003971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1759	Open in IMG/M
3300026475\|Ga0257147_1010613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1215	Open in IMG/M
3300026480\|Ga0257177_1036093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300026481\|Ga0257155_1005920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1536	Open in IMG/M
3300026489\|Ga0257160_1003134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1890	Open in IMG/M
3300026496\|Ga0257157_1001642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3087	Open in IMG/M
3300026499\|Ga0257181_1002928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1794	Open in IMG/M
3300026507\|Ga0257165_1062639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300026508\|Ga0257161_1013778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1495	Open in IMG/M
3300026515\|Ga0257158_1054434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300026721\|Ga0208841_100259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1351	Open in IMG/M
3300027002\|Ga0209110_1028844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	663	Open in IMG/M
3300027257\|Ga0208996_1003479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1668	Open in IMG/M
3300027504\|Ga0209114_1054418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300027512\|Ga0209179_1106036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300027512\|Ga0209179_1129023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300027546\|Ga0208984_1008549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1913	Open in IMG/M
3300027559\|Ga0209222_1010391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1896	Open in IMG/M
3300027575\|Ga0209525_1103609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300027603\|Ga0209331_1010663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2405	Open in IMG/M
3300027605\|Ga0209329_1109043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300027633\|Ga0208988_1157825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	543	Open in IMG/M
3300027651\|Ga0209217_1130469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300027655\|Ga0209388_1033008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1485	Open in IMG/M
3300027674\|Ga0209118_1009519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3371	Open in IMG/M
3300027684\|Ga0209626_1014994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1806	Open in IMG/M
3300027698\|Ga0209446_1020304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1648	Open in IMG/M
3300027768\|Ga0209772_10025830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1685	Open in IMG/M
3300027795\|Ga0209139_10054204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1407	Open in IMG/M
3300027862\|Ga0209701_10682663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	532	Open in IMG/M
(restricted) 3300027872\|Ga0255058_10414140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300027910\|Ga0209583_10315130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	715	Open in IMG/M
3300027915\|Ga0209069_10092723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
(restricted) 3300027997\|Ga0255057_10676968	Not Available	501	Open in IMG/M
3300028673\|Ga0257175_1004919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1786	Open in IMG/M
3300028802\|Ga0307503_10566948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300029951\|Ga0311371_10395144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1884	Open in IMG/M
3300030520\|Ga0311372_10494410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1799	Open in IMG/M
3300031253\|Ga0307490_1000024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	97236	Open in IMG/M
3300031546\|Ga0318538_10049947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2039	Open in IMG/M
3300031561\|Ga0318528_10052890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2058	Open in IMG/M
3300031668\|Ga0318542_10057821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1781	Open in IMG/M
3300031682\|Ga0318560_10066601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1808	Open in IMG/M
3300031719\|Ga0306917_10076737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2333	Open in IMG/M
3300031720\|Ga0307469_10717772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	908	Open in IMG/M
3300031744\|Ga0306918_10136003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1799	Open in IMG/M
3300031747\|Ga0318502_10061266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2006	Open in IMG/M
3300031748\|Ga0318492_10059463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1806	Open in IMG/M
3300031763\|Ga0318537_10035214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1792	Open in IMG/M
3300031777\|Ga0318543_10377716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	635	Open in IMG/M
3300031779\|Ga0318566_10083809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1552	Open in IMG/M
3300031781\|Ga0318547_10072795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1907	Open in IMG/M
3300031879\|Ga0306919_10074515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2322	Open in IMG/M
3300031880\|Ga0318544_10025680	All Organisms → cellular organisms → Bacteria → Proteobacteria	2013	Open in IMG/M
3300031890\|Ga0306925_12013002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	544	Open in IMG/M
3300031896\|Ga0318551_10528790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300031910\|Ga0306923_12014574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300031912\|Ga0306921_10800502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300031941\|Ga0310912_10130101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1883	Open in IMG/M
3300031942\|Ga0310916_10167423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1823	Open in IMG/M
3300032035\|Ga0310911_10629311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	622	Open in IMG/M
3300032041\|Ga0318549_10045017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1802	Open in IMG/M
3300032059\|Ga0318533_10090795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2099	Open in IMG/M
3300032076\|Ga0306924_10304289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1829	Open in IMG/M
3300032089\|Ga0318525_10061496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1875	Open in IMG/M
3300032094\|Ga0318540_10173507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1036	Open in IMG/M
3300032180\|Ga0307471_100810080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1103	Open in IMG/M
3300033289\|Ga0310914_11702634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	534	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.18%
Host-Associated	Host-Associated	5.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.24%
Aquatic	Environmental → Aquatic	7.94%
Plants	Host-Associated → Plants	4.76%
Microbial	Host-Associated → Microbial	0.53%
Fungi	Host-Associated → Fungi	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.19%
Sediment	Environmental → Aquatic → Sediment	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.70%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Marine	Environmental → Aquatic → Marine	1.59%
Peat	Environmental → Terrestrial → Peat	1.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.06%
Bacteria	Host-Associated → Microbial → Bacteria	0.53%
Mycelium	Host-Associated → Fungi → Mycelium	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.97%
Loam	Environmental → Terrestrial → Soil → Loam	22.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.12%
Gulf	Environmental → Aquatic → Marine → Gulf	1.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.06%
Ice	Environmental → Aquatic → Freshwater → Ice	0.53%
Coastal	Environmental → Aquatic → Marine → Coastal	0.53%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified	0.53%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.59%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	1.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.53%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.53%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.53%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified	0.53%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	16.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	5.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.70%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.65%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.12%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	1.06%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.06%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.06%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.06%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.53%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.53%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.53%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.53%
Chlorella Sacherophilia (Mzch 10155) Associated	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Chlorella Sacherophilia (Mzch 10155) Associated	0.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.53%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.53%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300000712	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2	Environmental	Open in IMG/M
3300000901	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2	Environmental	Open in IMG/M
3300000907	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001111	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3	Environmental	Open in IMG/M
3300001120	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001141	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2	Environmental	Open in IMG/M
3300001143	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1	Environmental	Open in IMG/M
3300001153	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001155	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1	Environmental	Open in IMG/M
3300001159	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2	Environmental	Open in IMG/M
3300001163	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2	Environmental	Open in IMG/M
3300001170	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2	Environmental	Open in IMG/M
3300001527	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illumina	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300008885	Microbial communities associated with green microalga Chlorella saccharophila, Germany - (MZCH: 10155)	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015068	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8C, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026220	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063 (SPAdes)	Environmental	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300026274	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026721	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN395 (SPAdes)	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027257	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027872 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027997 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031253	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SI3U	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00040930	2124908043	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRP
JGI11925J11888_1000622	3300000712	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSIA
JGI12192J12874_1001152	3300000901	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPF
JGI11871J12876_1001321	3300000907	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSTVRQI
JGI10216J12902_1015624412	3300000956	Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRGSNLQAD*
JGI12666J13322_1001501	3300001111	Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRRPTQIWV
JGI12137J13328_1001632	3300001120	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSTAR
JGI12637J13337_10011042	3300001137	Forest Soil	MLIRPAIGDTDPIRYGRPTPDGQFSGNIIDEAMRPSVVW*
JGI12638J13249_1004271	3300001141	Forest Soil	MLIRPAIDDTDPIRHRRPTPDGQFSGNIIDEAMRP
JGI12687J13287_1001732	3300001143	Forest Soil	MLIRPAIDDTDPIRHRRPTPDGQFSGNIIDEAMRGQ
JGI12684J13248_1001902	3300001153	Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRP
JGI12636J13339_10175972	3300001154	Forest Soil	MLIRPAIGDTDPIRYRCPTPDGQFSGNIIDEAMRP
JGI12625J13251_101351	3300001155	Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRPTIAW*
JGI12650J13346_10002991	3300001159	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSDM
JGI12705J13279_1001561	3300001163	Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRG
JGI12704J13340_10051122	3300001170	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPS
A3513AW1_10418342	3300001527	Permafrost	MLIRPAIGDTDPIRYRRPNADGQFSGNILDEAMRP
A3513AW1_11619992	3300001527	Permafrost	MLIRPAIGDTDPIRYRRHTPDGQFSGNIIDEAMRP*
JGI12630J15595_100130062	3300001545	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPCRKWPSFR
JGI12659J15293_100197121	3300001546	Forest Soil	MLIRPVIGDTDPIRSRRPTPDGQFSGNIIDEAMRPS
JGI12053J15887_100339632	3300001661	Forest Soil	MLIRPAIGDTDPIRYRRPTPDSQFSGNIIDEAMRP*
JGI12053J15887_101095171	3300001661	Forest Soil	MLIRPAIGDTDPIRYRCSTPDGQFSGNILDEAMRPCSF
C688J18823_109116431	3300001686	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPRC
JGI12627J18819_100295351	3300001867	Forest Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRRAK
JGI12627J18819_101154441	3300001867	Forest Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRRAKE
Ga0066701_107827131	3300005552	Soil	MLICPAIGDTDPIRYRRPTPDGQFSGNIFDEAMRPSIA*
Ga0070761_100719662	3300005591	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPAQRRNLQ*
Ga0066795_100858652	3300005938	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPS
Ga0066787_100052401	3300005950	Soil	MLICPAIGDTDPIRYRRPTPDSQFSGNIFDEAMRPSIA*
Ga0066789_1000075816	3300005994	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSTEVDQ*
Ga0066789_100544411	3300005994	Soil	RRVPMLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPPLV*
Ga0066790_104573081	3300005995	Soil	RRVPMLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRLPPPPSLGRL*
Ga0075021_103550052	3300006354	Watersheds	MLICPAIGDTDPIRYRRPTPGGQFSGNIFDEAMRP
Ga0075021_107062112	3300006354	Watersheds	MLIRPAIGDTDLIRCPCHSPGGHSSGNILSEAMRP
Ga0074056_117747291	3300006574	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRSDSLLVQ
Ga0066659_101508961	3300006797	Soil	MLIGPAIGDTDPIRYRRPTLDGQFSGNILDEAMRP*
Ga0075435_1017414772	3300007076	Populus Rhizosphere	MLIRPAIGDTEPIRYRCPNPDGQFSGNILDEAMR*
Ga0099791_105963481	3300007255	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPLSRGIGV
Ga0099793_100096245	3300007258	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNNLDEAMRPPSNLQAD*
Ga0115910_1593711	3300008885	Chlorella Sacherophilia (Mzch 10155) Associated	MLIRPAISDTDPIRHRRPTPDGQFSGNIIDEAMRPFARRG
Ga0105240_101119045	3300009093	Corn Rhizosphere	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRP
Ga0111539_115811181	3300009094	Populus Rhizosphere	MLIRPAIGDTEPIRYRCPNPDGQFSGNILDEAMRP
Ga0105245_103468712	3300009098	Miscanthus Rhizosphere	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRQSKNHRG
Ga0105247_110102382	3300009101	Switchgrass Rhizosphere	MLIRPAIGETDPIRYRRSNPDGQFSGNILDEAMRGSNLNAD*
Ga0114129_127606882	3300009147	Populus Rhizosphere	MLIRPAIGDTDPIRYRRPTPGGQFSGNIFDDAMR*
Ga0116129_12118812	3300009633	Peatland	MLIRPAIGDTDPIRYRRPNPDGQFSGNIIDEAMRP*
Ga0105858_10162321	3300009661	Permafrost Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPFGRRLPPIDPKMAI
Ga0105856_12798912	3300009662	Permafrost Soil	MLICPAIGDTDPILYRRPTPDSQFSGNIFDDAMRPDR
Ga0126309_106352431	3300010039	Serpentine Soil	MLICPAIGGTDPIRYRRPTPDGQFSGNIFDEAMRPSIA*
Ga0126373_131709731	3300010048	Tropical Forest Soil	PMLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRP*
Ga0137443_12345061	3300011433	Soil	MLICPAIGDTDPIRYHRPTPDGQFSGNIFYEAMRGHF
Ga0153922_10539651	3300012181	Attine Ant Fungus Gardens	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRP*
Ga0137363_103369322	3300012202	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPRQI*
Ga0137399_109162802	3300012203	Vadose Zone Soil	PAIGDTDPIRYRRPTPDDQFSGNILDEAMRPSIAW*
Ga0137384_110647001	3300012357	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRP
Ga0137360_101359091	3300012361	Vadose Zone Soil	MLIRPAIRDTDPIRYRRPTPDGQFSGNIIDEAMRSVSASNI
Ga0137407_116470462	3300012930	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIFDEAMRPSIA*
Ga0137410_104125862	3300012944	Vadose Zone Soil	PMLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPSIAW*
Ga0120135_10010413	3300014054	Permafrost	MLIRPAIGDTDPIRYRRPNADGQFSGNILDEAMRL*
Ga0120104_10069683	3300014829	Permafrost	MLIRPAIGDTDPIRYRRPNADGQFSGNILDEAMRGRMTIWSASGAN
Ga0180065_10811961	3300014878	Soil	MLICPAIGDTDPIRYRRPTPDGQFFGNIFDEAMRP
Ga0137414_11014371	3300015051	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPFRRPAMRP
Ga0137414_11136812	3300015051	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRAGQ
Ga0137411_12557081	3300015052	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAVTFLMRQC
Ga0137420_10643531	3300015054	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRDEAMR
Ga0167645_1183052	3300015068	Glacier Forefield Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRLCVPKT*
Ga0167639_10053371	3300015080	Glacier Forefield Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPRAAP
Ga0167642_10453511	3300015160	Glacier Forefield Soil	MLICPAIGDTDPIRYRRPTLGGQFSGNIFDEAMRPSIA*
Ga0167631_10077071	3300015168	Glacier Forefield Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPFE
Ga0167644_100023240	3300015206	Glacier Forefield Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRPRDRLIDQWCK*
Ga0137418_109247921	3300015241	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPAS
Ga0132257_1006201901	3300015373	Arabidopsis Rhizosphere	LICPAIGDADPIRYRRPTPDGQFSGNIFDEAMRPAP*
Ga0132257_1045032321	3300015373	Arabidopsis Rhizosphere	MLIRPAIGDTDPIRYRRPTPDGQFSGNIPDEAMRG
Ga0187777_103697712	3300017974	Tropical Peatland	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRPFD
Ga0184605_100355602	3300018027	Groundwater Sediment	MLICPAIGDTDPIRYRRPTPGGQFSGNIFDEAMRPSIA
Ga0190265_103425762	3300018422	Soil	MLICPAIGDTDPIRYHRPTPDSQFSGNIFDEAMRT
Ga0066662_101147021	3300018468	Grasslands Soil	MLIGPAIGDTDPIRYRRPTPDGQFSGNIFDEAMRPSTA
Ga0193705_10302741	3300019869	Soil	MLICPAIRDTDPIRYRRPTPGGQFSGNIFDEAMRV
Ga0193723_11423991	3300019879	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPL
Ga0193713_10227721	3300019882	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPP
Ga0193727_10321521	3300019886	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPSI
Ga0193755_10307582	3300020004	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPPA
Ga0206354_113223281	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MLIRPAIGDTDPIRYRRPNADGQFSGNILDEAMRPAAQI
Ga0179590_10139781	3300020140	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRSSEL
Ga0210395_106725301	3300020582	Soil	MLIRPVIGDTDPIRSRRPTPDGQFSGNIIDEAMRPAQRRNLQ
Ga0210401_102303791	3300020583	Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRPPS
Ga0179596_101288631	3300021086	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRSPDHRRREVFE
Ga0210406_101757961	3300021168	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRVPVN
Ga0210400_100755844	3300021170	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIGEAMRPST
Ga0210405_101562061	3300021171	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIGEAMRPRAAPE
Ga0210388_104379821	3300021181	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRVWAAAFGG
Ga0193699_100572922	3300021363	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPPSLG
Ga0210387_100559696	3300021405	Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRPASLN
Ga0210392_102902731	3300021475	Soil	MLIRPAISDTDPIRYRRPTPDGQFSGNIIDEAMRPTRDLGG
Ga0210398_101656791	3300021477	Soil	MLIRPVIGDTDPIRSRRPTPDGQFSGNIIDEAMRGVKLG
Ga0212090_108172522	3300022561	Glacier Valley	MLIRPAIGETDPIRYRRHTPDGQFSGNIIDEAMRRANKPR
Ga0233357_10012543	3300023056	Soil	MLIRPAIGDTDPIRYGRPTPDGQFSGNIIDEAMRPFT
Ga0137417_11030201	3300024330	Vadose Zone Soil	MLIRPAIGDTDPIRYRRIRYRRPTPDGQFSGNIIDEAM
Ga0137417_12806332	3300024330	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRP
Ga0208848_10083172	3300025509	Arctic Peat Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRANRL
Ga0207710_104344342	3300025900	Switchgrass Rhizosphere	MLIRPAIGETDPIRYRRSNPDGQFSGNILDEAMRGSNLNAD
Ga0207685_103989861	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLIRPAIGETDPIRYRRSNPDGQFSGNILDEAMRPA
Ga0207684_108317451	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLIRPAIDDTDPIRYRRPTPDGQFSGNIFDEAMRGSILQAE
Ga0207707_102056792	3300025912	Corn Rhizosphere	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRLTKAALSFAGR
Ga0207652_101047503	3300025921	Corn Rhizosphere	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRLQF
Ga0207700_101547911	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLIRPAIGETDPIRYRRSNPDGQFSGNILDEAMRPADRHPK
Ga0207700_105078191	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLIRPAIGDTDPIRCRRPNPDGQFSGNILDEAMRGVNIAG
Ga0207661_101896311	3300025944	Corn Rhizosphere	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRPRRHPD
Ga0209838_10050051	3300026214	Soil	MLICPAIGDTDPIRYRRPTPDSQFSGNIFDEAMRPSIA
Ga0209855_10086841	3300026220	Permafrost Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSSNQA
Ga0209848_10112961	3300026221	Permafrost Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRR
Ga0209888_10110921	3300026274	Permafrost Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRRVSAFKY
Ga0209890_100129981	3300026291	Soil	RPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSRIAQTSVEL
Ga0209890_100240101	3300026291	Soil	PAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSITW
Ga0209890_100301161	3300026291	Soil	RPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPPLV
Ga0209890_101412301	3300026291	Soil	IRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPFGRRLPPIDPKMAI
Ga0209839_100395851	3300026294	Soil	MLICPAIGDTDPIRYRRPTPDSQFSGNIFDEAMRG
Ga0257149_10116802	3300026355	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRR
Ga0257176_10002603	3300026361	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPGRRAA
Ga0257152_10025502	3300026369	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPA
Ga0257167_10015181	3300026376	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPS
Ga0257147_10039711	3300026475	Soil	MLIRPAIRDTDPIRYRRPTPDGQFSGNIIDEAMRVNIAGR
Ga0257147_10106131	3300026475	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPST
Ga0257177_10360931	3300026480	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPSA
Ga0257155_10059201	3300026481	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRGSNLNA
Ga0257160_10031343	3300026489	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRG
Ga0257157_10016421	3300026496	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPSTA
Ga0257181_10029281	3300026499	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPF
Ga0257165_10626391	3300026507	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPLQV
Ga0257161_10137781	3300026508	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPLERRVL
Ga0257158_10544342	3300026515	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRG
Ga0208841_1002591	3300026721	Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPP
Ga0209110_10288441	3300027002	Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRPFTA
Ga0208996_10034791	3300027257	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRYRNGLCRHYV
Ga0209114_10544182	3300027504	Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRPSYCLT
Ga0209179_11060361	3300027512	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPG
Ga0209179_11290232	3300027512	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPLQVGLLRCL
Ga0208984_10085491	3300027546	Forest Soil	MLIRPAIGDTDPIRYRRPTPDSQFSGNIIDEAMRAHNLAKLATAR
Ga0209222_10103911	3300027559	Forest Soil	MLIRPAIGDTDLIRYRRPTPDGQFSGNIIDEAMRPSIVW
Ga0209525_11036091	3300027575	Forest Soil	MLIRPAIGDTDPIRYRRHTPDGQFSGNIIDEAMRPG
Ga0209331_10106631	3300027603	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPTIAW
Ga0209329_11090432	3300027605	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPFGRRVL
Ga0208988_11578251	3300027633	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRVNFGRRSPGLGGQ
Ga0209217_11304692	3300027651	Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNIIDEAMRPALAPIGRLKSAV
Ga0209388_10330081	3300027655	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRPLFFSKIV
Ga0209118_10095192	3300027674	Forest Soil	MLICPAIGDTDPIRYRRPTPDGQFSGNIFDEAMRPSIA
Ga0209626_10149942	3300027684	Forest Soil	MLIRPAIGDTDPIRYGRPTPDGQFSGNIIDEAMRPFGRR
Ga0209446_10203041	3300027698	Bog Forest Soil	MLIRPAIGDTDPIRYRRPTPDGQFSGNILDEAMRLHRLAT
Ga0209772_100258302	3300027768	Bog Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRPVRRQNLE
Ga0209139_100542042	3300027795	Bog Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRGSILDADP
Ga0209701_106826631	3300027862	Vadose Zone Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRGAGVNLRSRNTVQV
(restricted) Ga0255058_104141402	3300027872	Seawater	MLICPAIGDTDPIRCRRPSHGSQFSGNILDEAMRLIVGTD
Ga0209583_103151301	3300027910	Watersheds	MLICPAIGDTDPIRYRRPTPDGQFSGNIFDEAMRPRSAS
Ga0209069_100927231	3300027915	Watersheds	MLICPAIDDTDLIRYRRPTPDGQSSGNIFGEAMRP
(restricted) Ga0255057_106769681	3300027997	Seawater	MLICPAIGDTDPIRCRRPSHGSQFSGNILDEAMRPLPVANNFHW
Ga0257175_10049191	3300028673	Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPASR
Ga0307503_105669482	3300028802	Soil	MLICPAIGDTDPIRYRRPTPDGQFSGNIFDEAMRHR
Ga0311371_103951443	3300029951	Palsa	MLIRPAIGDTDPIRYRRHTPDGQFSGNIIDEAMRPL
Ga0311372_104944102	3300030520	Palsa	MLIRPAIGDTDPIRYRRHTPDGQFSGNIIDEAMRS
Ga0307490_10000242	3300031253	Sea-Ice Brine	MLIRPAIGDTDPIRYRRPNADGQFSGNILDEAMRSSRFESMRHCWR
Ga0318538_100499471	3300031546	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRGSKLHAE
Ga0318528_100528901	3300031561	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRC
Ga0318542_100578212	3300031668	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRGSK
Ga0318560_100666012	3300031682	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPIGVALKCRGTASL
Ga0306917_100767372	3300031719	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRSGALLV
Ga0307469_107177722	3300031720	Hardwood Forest Soil	MLIRPAIGDTDPIRYRRPTPDDQFSGNILDEAMRPSTACKIN
Ga0306918_101360032	3300031744	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRP
Ga0318502_100612662	3300031747	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRRSA
Ga0318492_100594632	3300031748	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRG
Ga0318537_100352142	3300031763	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPPYCLI
Ga0318543_103777161	3300031777	Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRS
Ga0318566_100838091	3300031779	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPIGVA
Ga0318547_100727951	3300031781	Soil	SSRRAPMLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRP
Ga0306919_100745153	3300031879	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRGSKLHA
Ga0318544_100256803	3300031880	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPLQI
Ga0306925_120130022	3300031890	Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAPRCFRT
Ga0318551_105287902	3300031896	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPPYCL
Ga0306923_120145742	3300031910	Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRSGALLV
Ga0306921_108005021	3300031912	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRRQILVGHD
Ga0310912_101301013	3300031941	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRGVNF
Ga0310916_101674232	3300031942	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPSYCLI
Ga0310911_106293111	3300032035	Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRERLV
Ga0318549_100450172	3300032041	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPLM
Ga0318533_100907951	3300032059	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPFRLPTLG
Ga0306924_103042892	3300032076	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRPLSRG
Ga0318525_100614963	3300032089	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRYW
Ga0318540_101735071	3300032094	Soil	MLIRPAIGDTDPIRYRRPNPDGQFSGNILDEAMRWIERVTPGSMALL
Ga0307471_1008100802	3300032180	Hardwood Forest Soil	MLIRPAIDDTDPIRYRRPTPDGQFSGNIIDEAMRDASDP
Ga0310914_117026341	3300033289	Soil	MLIRPAIGDTEPIRYRRPNPDGQFSGNILDEAMRPLSCG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign