Metagenome / Metatranscriptome Family F029829

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F029829
Family Type	Metagenome / Metatranscriptome
Number of Sequences	187
Average Sequence Length	42 residues
Representative Sequence	MNGSRSRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLNASE
Number of Associated Samples	132
Number of Associated Scaffolds	187

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.01 %
% of genes near scaffold ends (potentially truncated)	89.84 %
% of genes from short scaffolds (< 2000 bps)	85.03 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.497 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (57.754 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.337 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.66% β-sheet: 0.00% Coil/Unstructured: 56.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 187 Family Scaffolds
PF07690	MFS_1	13.37
PF01724	DUF29	9.09
PF00496	SBP_bac_5	2.14
PF07969	Amidohydro_3	2.14
PF00753	Lactamase_B	2.14
PF08450	SGL	1.60
PF00144	Beta-lactamase	1.60
PF02558	ApbA	1.60
PF01042	Ribonuc_L-PSP	1.07
PF00383	dCMP_cyt_deam_1	1.07
PF01381	HTH_3	1.07
PF07687	M20_dimer	1.07
PF13649	Methyltransf_25	1.07
PF07366	SnoaL	1.07
PF00561	Abhydrolase_1	1.07
PF07681	DoxX	0.53
PF01522	Polysacc_deac_1	0.53
PF02705	K_trans	0.53
PF07978	NIPSNAP	0.53
PF02826	2-Hacid_dh_C	0.53
PF01906	YbjQ_1	0.53
PF00005	ABC_tran	0.53
PF00355	Rieske	0.53
PF00296	Bac_luciferase	0.53
PF03706	LPG_synthase_TM	0.53
PF12681	Glyoxalase_2	0.53
PF13683	rve_3	0.53
PF02518	HATPase_c	0.53
PF07883	Cupin_2	0.53
PF00441	Acyl-CoA_dh_1	0.53
PF05973	Gp49	0.53
PF00083	Sugar_tr	0.53
PF00346	Complex1_49kDa	0.53
PF13924	Lipocalin_5	0.53
PF00536	SAM_1	0.53
PF02515	CoA_transf_3	0.53

COG ID	Name	Functional Category	% Frequency in 187 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.60
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.60
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.60
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.60
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.60
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.07
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.53
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.53
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.53
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.53
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.53
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.53
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.53
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.53
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.53
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.53
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.53
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.53
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.50 %
Unclassified	root	N/A	38.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.50 %
Unclassified	root	N/A	38.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.50 %
Unclassified	root	N/A	38.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.07 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.07 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.35 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.07 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.53 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.35 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.07 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.07 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.53 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.53 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.07 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.07 %
Candidatus Aminicenantes bacterium RBG_13_62_12	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_62_12	0.53 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.53 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.35 %
Bradyrhizobium centrosematis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.07 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.07 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.53 %
Candidatus Aminicenantes bacterium RBG_13_62_12	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_62_12	0.53 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.35 %
Bradyrhizobium centrosematis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.07 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.07 %
Pseudomonas sp. GW460-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW460-8	0.53 %
Candidatus Aminicenantes bacterium RBG_13_62_12	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_62_12	0.53 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100662828	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300004082\|Ga0062384_100063113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1848	Open in IMG/M
3300004082\|Ga0062384_100864958	Not Available	637	Open in IMG/M
3300004152\|Ga0062386_101827333	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300004635\|Ga0062388_101663231	Not Available	651	Open in IMG/M
3300005435\|Ga0070714_102373673	Not Available	515	Open in IMG/M
3300005446\|Ga0066686_10754052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	652	Open in IMG/M
3300005903\|Ga0075279_10049058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300006086\|Ga0075019_10699975	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006175\|Ga0070712_101021178	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300006176\|Ga0070765_100746922	Not Available	924	Open in IMG/M
3300006176\|Ga0070765_101251280	Not Available	700	Open in IMG/M
3300006176\|Ga0070765_101839710	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300006804\|Ga0079221_10221594	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300006806\|Ga0079220_11307124	Not Available	608	Open in IMG/M
3300006871\|Ga0075434_101790714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	621	Open in IMG/M
3300009176\|Ga0105242_10822996	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300009400\|Ga0116854_1060986	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300009553\|Ga0105249_12577579	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010046\|Ga0126384_10149445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1796	Open in IMG/M
3300010048\|Ga0126373_10708341	Not Available	1065	Open in IMG/M
3300010048\|Ga0126373_12144345	Not Available	620	Open in IMG/M
3300010343\|Ga0074044_10539026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300010359\|Ga0126376_10209122	Not Available	1624	Open in IMG/M
3300010359\|Ga0126376_13175172	Not Available	508	Open in IMG/M
3300010360\|Ga0126372_11152427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300010362\|Ga0126377_12577602	Not Available	584	Open in IMG/M
3300010366\|Ga0126379_13493770	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010373\|Ga0134128_12293420	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010375\|Ga0105239_13327239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300010376\|Ga0126381_101081576	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300010391\|Ga0136847_13606473	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300010396\|Ga0134126_10906513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300010398\|Ga0126383_10295762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1614	Open in IMG/M
3300012205\|Ga0137362_11761871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300012361\|Ga0137360_10355109	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300012917\|Ga0137395_11211125	Not Available	528	Open in IMG/M
3300012922\|Ga0137394_11375735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW460-8	567	Open in IMG/M
3300012924\|Ga0137413_11491950	Not Available	549	Open in IMG/M
3300012988\|Ga0164306_10608274	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300013105\|Ga0157369_12008674	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300014487\|Ga0182000_10102307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	964	Open in IMG/M
3300014497\|Ga0182008_10601886	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300015242\|Ga0137412_10964790	Not Available	613	Open in IMG/M
3300016294\|Ga0182041_10491149	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300016294\|Ga0182041_11615663	Not Available	599	Open in IMG/M
3300016319\|Ga0182033_11664652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300016341\|Ga0182035_10161813	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300016341\|Ga0182035_10541341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300016341\|Ga0182035_10729252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	865	Open in IMG/M
3300016357\|Ga0182032_10680709	Not Available	862	Open in IMG/M
3300016371\|Ga0182034_10101863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2059	Open in IMG/M
3300016387\|Ga0182040_10818536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300016387\|Ga0182040_11367909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300016404\|Ga0182037_10071182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2407	Open in IMG/M
3300016404\|Ga0182037_10849831	Not Available	789	Open in IMG/M
3300016404\|Ga0182037_10974811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300016445\|Ga0182038_11201775	Not Available	676	Open in IMG/M
3300016445\|Ga0182038_11961460	Not Available	530	Open in IMG/M
3300016445\|Ga0182038_11978448	Not Available	527	Open in IMG/M
3300017942\|Ga0187808_10109962	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300018433\|Ga0066667_11614160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	578	Open in IMG/M
3300020579\|Ga0210407_11183292	Not Available	576	Open in IMG/M
3300020580\|Ga0210403_10809101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	744	Open in IMG/M
3300020581\|Ga0210399_10589190	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300020582\|Ga0210395_10398752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1035	Open in IMG/M
3300021178\|Ga0210408_10193203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300021178\|Ga0210408_10958949	Not Available	663	Open in IMG/M
3300021180\|Ga0210396_10789152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300021180\|Ga0210396_11379911	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300021404\|Ga0210389_10353842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1153	Open in IMG/M
3300021406\|Ga0210386_10402940	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300021432\|Ga0210384_11684651	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300021475\|Ga0210392_10998487	Not Available	627	Open in IMG/M
3300021560\|Ga0126371_11074701	Not Available	944	Open in IMG/M
3300022720\|Ga0242672_1012582	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300025916\|Ga0207663_10945532	Not Available	690	Open in IMG/M
3300026023\|Ga0207677_11566787	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300027073\|Ga0208366_1014699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	845	Open in IMG/M
3300027767\|Ga0209655_10060073	Not Available	1266	Open in IMG/M
3300027824\|Ga0209040_10327940	Not Available	735	Open in IMG/M
3300027855\|Ga0209693_10159241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1114	Open in IMG/M
3300027884\|Ga0209275_10314039	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_62_12	872	Open in IMG/M
3300027884\|Ga0209275_10616035	Not Available	623	Open in IMG/M
3300029636\|Ga0222749_10019545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2792	Open in IMG/M
3300031546\|Ga0318538_10103694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300031549\|Ga0318571_10228595	Not Available	676	Open in IMG/M
3300031561\|Ga0318528_10593495	Not Available	594	Open in IMG/M
3300031561\|Ga0318528_10679874	Not Available	551	Open in IMG/M
3300031572\|Ga0318515_10706492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300031573\|Ga0310915_10015848	All Organisms → cellular organisms → Bacteria	4488	Open in IMG/M
3300031573\|Ga0310915_10280055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300031640\|Ga0318555_10265988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	927	Open in IMG/M
3300031679\|Ga0318561_10057678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1961	Open in IMG/M
3300031682\|Ga0318560_10096628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1524	Open in IMG/M
3300031708\|Ga0310686_117480637	All Organisms → cellular organisms → Bacteria	2340	Open in IMG/M
3300031719\|Ga0306917_10215159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1460	Open in IMG/M
3300031736\|Ga0318501_10089429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1519	Open in IMG/M
3300031744\|Ga0306918_10088331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2176	Open in IMG/M
3300031744\|Ga0306918_11066768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300031747\|Ga0318502_10689274	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031751\|Ga0318494_10865542	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031763\|Ga0318537_10144754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	884	Open in IMG/M
3300031765\|Ga0318554_10373532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300031765\|Ga0318554_10755820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300031768\|Ga0318509_10420300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300031771\|Ga0318546_10099293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1907	Open in IMG/M
3300031771\|Ga0318546_10785224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	670	Open in IMG/M
3300031777\|Ga0318543_10209701	Not Available	866	Open in IMG/M
3300031781\|Ga0318547_10977270	Not Available	529	Open in IMG/M
3300031782\|Ga0318552_10687882	Not Available	522	Open in IMG/M
3300031792\|Ga0318529_10399356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300031793\|Ga0318548_10518624	Not Available	582	Open in IMG/M
3300031794\|Ga0318503_10081330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1016	Open in IMG/M
3300031797\|Ga0318550_10350055	Not Available	716	Open in IMG/M
3300031799\|Ga0318565_10284418	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031819\|Ga0318568_10123963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1564	Open in IMG/M
3300031833\|Ga0310917_10488707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300031846\|Ga0318512_10330742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300031846\|Ga0318512_10424456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300031859\|Ga0318527_10095742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1214	Open in IMG/M
3300031860\|Ga0318495_10018633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2957	Open in IMG/M
3300031860\|Ga0318495_10398287	Not Available	607	Open in IMG/M
3300031879\|Ga0306919_10505892	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300031879\|Ga0306919_10843411	Not Available	703	Open in IMG/M
3300031879\|Ga0306919_11463030	Not Available	515	Open in IMG/M
3300031890\|Ga0306925_10491796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300031890\|Ga0306925_11065752	Not Available	819	Open in IMG/M
3300031890\|Ga0306925_11730751	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031890\|Ga0306925_11783450	Not Available	590	Open in IMG/M
3300031890\|Ga0306925_12198913	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031896\|Ga0318551_10097482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1561	Open in IMG/M
3300031897\|Ga0318520_10436966	Not Available	803	Open in IMG/M
3300031897\|Ga0318520_10497084	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031910\|Ga0306923_10202562	Not Available	2269	Open in IMG/M
3300031912\|Ga0306921_10030729	All Organisms → cellular organisms → Bacteria → Proteobacteria	5985	Open in IMG/M
3300031912\|Ga0306921_10897074	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300031942\|Ga0310916_10841698	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031945\|Ga0310913_10147645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1623	Open in IMG/M
3300031947\|Ga0310909_10138219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1993	Open in IMG/M
3300031947\|Ga0310909_10582559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300031947\|Ga0310909_10745905	Not Available	811	Open in IMG/M
3300031947\|Ga0310909_11030409	Not Available	671	Open in IMG/M
3300031947\|Ga0310909_11131290	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031954\|Ga0306926_11403557	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300031954\|Ga0306926_11600998	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031954\|Ga0306926_12048236	Not Available	642	Open in IMG/M
3300031962\|Ga0307479_10384394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300032001\|Ga0306922_12242354	Not Available	525	Open in IMG/M
3300032009\|Ga0318563_10784308	Not Available	511	Open in IMG/M
3300032060\|Ga0318505_10573181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300032063\|Ga0318504_10540174	Not Available	559	Open in IMG/M
3300032064\|Ga0318510_10004051	All Organisms → cellular organisms → Bacteria → Proteobacteria	3762	Open in IMG/M
3300032067\|Ga0318524_10248250	Not Available	916	Open in IMG/M
3300032068\|Ga0318553_10137481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1261	Open in IMG/M
3300032076\|Ga0306924_11647042	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300032076\|Ga0306924_11749177	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300032091\|Ga0318577_10476895	Not Available	595	Open in IMG/M
3300032094\|Ga0318540_10305756	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300032160\|Ga0311301_11703281	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300032205\|Ga0307472_100345301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1219	Open in IMG/M
3300032261\|Ga0306920_100891113	Not Available	1301	Open in IMG/M
3300032261\|Ga0306920_101538668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	948	Open in IMG/M
3300032261\|Ga0306920_102448653	Not Available	719	Open in IMG/M
3300032261\|Ga0306920_102568279	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300032261\|Ga0306920_103930643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300032783\|Ga0335079_11234989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300033290\|Ga0318519_10125515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1410	Open in IMG/M
3300033412\|Ga0310810_10516425	Not Available	1182	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.26%
Host-Associated	Host-Associated	3.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.44%
Aquatic	Environmental → Aquatic	4.81%
Plants	Host-Associated → Plants	3.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.44%
Freshwater	Environmental → Aquatic → Freshwater	4.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.21%
Sediment	Environmental → Aquatic → Sediment	0.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.96%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%
Lake	Environmental → Aquatic → Freshwater → Lake	0.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.07%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.28%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.21%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.07%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.53%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.53%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.53%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.53%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005903	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1006628281	3300002245	Forest Soil	VPYAPSHPPPTIYVAGLFAMGYTEFYTFLIPLYGL
Ga0062384_1000631131	3300004082	Bog Forest Soil	MPSLRSGPPTSLYVAGPFAQGYTEVYNFLIPLYGLSLGMS
Ga0062384_1008649581	3300004082	Bog Forest Soil	MNASRAGPPASLYVAGPFSMGYVDFFTFLIPLYGLSRGLDASEIGI
Ga0062386_1018273332	3300004152	Bog Forest Soil	MSDPRSQPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLGASEIG
Ga0062388_1016632311	3300004635	Bog Forest Soil	MNASRVGPPASLYVAGPFSMGYVDFFTFLIPLYGFLIPLYGLSRGLDASEIGI
Ga0070714_1023736732	3300005435	Agricultural Soil	MTRFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMS
Ga0066686_107540522	3300005446	Soil	MNACRLRPPASLYVAGPFSMGYVDFFTFLIPLYALSLGFDASEIGILV
Ga0066699_109659343	3300005561	Soil	MTPLPYRPPASIYVAGLFAMGYTEFYIFLIPLYALSLGMSA
Ga0075279_100490581	3300005903	Rice Paddy Soil	MNSRPPRLTPLFVAAPFSMGYVDFYTFLMPLYALSLGFDATEVG
Ga0075019_106999751	3300006086	Watersheds	LAGAAARMNRSGTQSLTALYIAAPFSMGYVDFYTFLMPLYALSLG
Ga0070712_1010211782	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNAHRLRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASEIGML
Ga0070765_1007469221	3300006176	Soil	MARFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLG
Ga0070765_1012512801	3300006176	Soil	MSTAPSRPPASLYVAGPFSMGYVDFFTFLIPLYGLSL
Ga0070765_1018397101	3300006176	Soil	MLSVRSRPPASLYVTGPFAQGYTQLYNFLVPLYGLSLG
Ga0079221_102215941	3300006804	Agricultural Soil	MNNAHPKPPAALYVAGPFSMGYVDFFTFLIPLYGLSLGLDAVEIGILV
Ga0079220_113071242	3300006806	Agricultural Soil	MVRFQSRLPASLYVAGSFAMGYTEFYNFLIPLYGLSL
Ga0075434_1017907142	3300006871	Populus Rhizosphere	MNACRSRPPASLYVAGPFSMGYVDFFTFLIPLYALSLG
Ga0105242_108229961	3300009176	Miscanthus Rhizosphere	VAGCVNRSGIRSLTALYVAAPFSMGYVDFYTFLMPLYALS
Ga0116854_10609861	3300009400	Soil	MKAFRSSPLSSLYVAGPFSMGYVDFYTFLIPLYALSLGFDASEIGIL
Ga0105249_125775792	3300009553	Switchgrass Rhizosphere	MNGSGTRSLTALYVAAPFSMGYVDFYTFLMPLYALSLGFDAT
Ga0126384_101494453	3300010046	Tropical Forest Soil	VNGLHPRPPASLYVAGPFSMGYVDFYTFLIPLFGLSLGL
Ga0126373_107083412	3300010048	Tropical Forest Soil	MNGSGTRSLTALYVAAPFSMGYVDFYTFLMPLYALSLGFDAA
Ga0126373_121443452	3300010048	Tropical Forest Soil	MKSSSARPLTALYVAGPFSMGYVDFYTFLMPLYALSLGFD
Ga0074044_105390263	3300010343	Bog Forest Soil	MTPRPSRLPASIYITGLFAMGYTEFYTFLIPLYGLSLGMS
Ga0126376_102091221	3300010359	Tropical Forest Soil	MKASLPRSLPSLYVAGPFSMGYVDFHTFLIPLYGLSLGFDA
Ga0126376_131751722	3300010359	Tropical Forest Soil	MARFQSRLPASLYIAGPFAMGHTEFYNFVIPLYGLSLGM
Ga0126372_111524273	3300010360	Tropical Forest Soil	MNPSRSRSLASLYVAGPFSMGYVDFYTFLIPLYGLSLGFDASEVGILVG
Ga0126377_125776021	3300010362	Tropical Forest Soil	MIGSGTRSLTALYVAAPFSMGYVDFYNFLMPLYALS
Ga0126379_134937702	3300010366	Tropical Forest Soil	MNTFRSRPLTSLYVAGPLSMGYVDFYTFLIPLYALSLG
Ga0134128_122934202	3300010373	Terrestrial Soil	MNGSGARPLTALYLAAPFSMGYVDFYTFLMPLYALSLGFDAAE
Ga0105239_133272392	3300010375	Corn Rhizosphere	MKGSGTRSLTALYVAAPFSMGYVDFYTFLMPLYALSLGFDAAEVG
Ga0126381_1010815762	3300010376	Tropical Forest Soil	MNGSGARSLTALYVAAPFSMGYVDFYTFLMPLYALSLGFDAAEV
Ga0136847_136064731	3300010391	Freshwater Sediment	MNVSRSRPPASLYVVGPFSMGYVDFYTFLIPLYGLSLGLDASEIGILVGAR
Ga0134126_109065133	3300010396	Terrestrial Soil	MDTTRPTPPASLYVAGPFSMGYVDFFTFLIPLYGLSLGLDAVEIGILVGARS
Ga0126383_102957623	3300010398	Tropical Forest Soil	MNASRSRSLASLYVAGPFSMGYVDFYTFLIPLYGLSLG
Ga0137362_117618712	3300012205	Vadose Zone Soil	MTRTQTGPPASIYVAGLFAMGYTDFYIFLIPLYGLSLGMSAGE
Ga0137360_103551091	3300012361	Vadose Zone Soil	MSASRSRPPASLYVAGPLSMGYVDFFTFLIPLYALSLGLDASEIGI
Ga0137361_101632552	3300012362	Vadose Zone Soil	MTPRPSRPPASIYLAGLFAMGYTEFYIFLIPLYALSLGMSAGEVG
Ga0137395_112111252	3300012917	Vadose Zone Soil	MRTAPARPPAALYVAGPFSMGYVDFFTFLIPLYGLSLGF
Ga0137394_113757351	3300012922	Vadose Zone Soil	MNQPRPRPLASLYVAGPFSMGYVDFYTFLIPLYGLSLGLGASEIGILV
Ga0137413_114919502	3300012924	Vadose Zone Soil	MSASRSRPPASLYVAGPLSMGYVDFFTFLIPLYALSLGLDAS
Ga0137407_121216651	3300012930	Vadose Zone Soil	MTPRPSRPPASIYVAGLFAMGYTDFYIFLIPLYALSLGMSAGEVG
Ga0164306_106082741	3300012988	Soil	MNRSGTQSLTALYIAAPFSMGYVDFYTFLMPLYAL
Ga0157369_120086741	3300013105	Corn Rhizosphere	MNGSGARPLTALYLAAPFSMGYVDFYTFPMPLYPLSLGFDAVEVGILV
Ga0182000_101023072	3300014487	Soil	MHDIGPRQLTSLYVAGPFSMGYVDFFTFLIPLYGLSLGLDAAEIGVLVG
Ga0182008_106018861	3300014497	Rhizosphere	MNGSGARPLSALYVAAPFSMSYVDFYTFLMPLHALSLR
Ga0137412_109647902	3300015242	Vadose Zone Soil	MSASRSRPPASLYVAGPLSMGYVDFFTFLIPLYALSLGLDASE
Ga0182041_104911491	3300016294	Soil	MATIRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSL
Ga0182041_116156631	3300016294	Soil	MAIIRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSL
Ga0182033_101470961	3300016319	Soil	MIPSPSRPPASIYIAGLFAMGYTEFYTFLIPLYGLSLGMTAGEIG
Ga0182033_116646522	3300016319	Soil	MTTSPSRPPASVYVAGPFAMGYTEIYTFLIPLYGLSV
Ga0182035_101618133	3300016341	Soil	MSARGSRPPVSLYVAGPFSMGYVDFFTFLIPLYALSLGLDA
Ga0182035_105413413	3300016341	Soil	MPDFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGM
Ga0182035_107292521	3300016341	Soil	MTAGSPRPPASIYVVGPFSMGYVDFYTFLIPLYGLSLGLDASE
Ga0182032_106807091	3300016357	Soil	MNGRRSKSLASLYIAGPLSMGYVDFYTFLIPLYTVSLGFDASEIG
Ga0182034_101018633	3300016371	Soil	MFTRMSGSRPRPPASLYVAGPFIMGYVDFYTFLIP
Ga0182040_108185362	3300016387	Soil	MSLSRSRPPASLYVAGPFSMGYIDFYTFLIPLYGLSLGLNASEIGILVGGR
Ga0182040_113679091	3300016387	Soil	MNGSHPRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASEI
Ga0182037_100711821	3300016404	Soil	MFTRMSGSRPRPPASLYVAGPFSMGYVDFYTFLIPLYGL
Ga0182037_108498311	3300016404	Soil	MAIIRSRLPASLYVAGPFAMGYTEFFNFLIPLYGLSLG
Ga0182037_109748111	3300016404	Soil	MNGSRSRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLNASEIGILV
Ga0182038_112017751	3300016445	Soil	MADFRLRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGEVGMLV
Ga0182038_119614602	3300016445	Soil	MPEFPSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSL
Ga0182038_119784482	3300016445	Soil	MVHFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSL
Ga0187808_101099621	3300017942	Freshwater Sediment	MPSLRSGPPASLYIAGPFSQGYTEVYNFLIPLYGLSLGMSASKIGMLV
Ga0066667_116141601	3300018433	Grasslands Soil	MNACRLRPPASLYVAGPFSMGYVDFFTFLIPLYALSLGLDASEIGILVG
Ga0210407_111832922	3300020579	Soil	MNASRSGSLASLYIVGPFSMGYVDFYTFLIPLYGLSLGFDAS
Ga0210403_108091012	3300020580	Soil	MSASRSRPPASLYVAGPFSMGYVDFFTFLIPLYALSLGLDASEIGIL
Ga0210399_105891901	3300020581	Soil	MTRFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSL
Ga0210395_103987523	3300020582	Soil	MTRPRAGPPASIYVAGLFAMGYTDFYIFLIPLYGLSL
Ga0210408_101932031	3300021178	Soil	VNGSRPRPPASLYVAGPFSMGYVDFSTFLIPLFGLSLGLHASE
Ga0210408_109589491	3300021178	Soil	MARFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSA
Ga0210396_107891521	3300021180	Soil	MAGVADCMNGSRIRSLTALYVAAPFSMGYVDFYTFLMPLYALSLGFDAA
Ga0210396_113799111	3300021180	Soil	MARFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMS
Ga0210389_103538421	3300021404	Soil	MNTARPKPPASLYLAGPFSMGYLDFFTFLIPLYGLSLGLDAVEIGILVGARSM
Ga0210386_104029401	3300021406	Soil	MNTPRPAPPASLYVAGPFSMGYVDFFTFLIPLYGLSLRLDAVQIG
Ga0210384_116846511	3300021432	Soil	MNTPRPKPPASLYLAGPFSMGYVDFFTFLIPLYGL
Ga0210392_109984871	3300021475	Soil	MTRFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGLS
Ga0126371_105767231	3300021560	Tropical Forest Soil	MTLHPSRPPASIFVAGLFAMGYTQFYVFLIPLFGLS
Ga0126371_110747011	3300021560	Tropical Forest Soil	MPEFRLRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAG
Ga0242672_10125821	3300022720	Soil	MNTPRPKPPASLYLAGPFSMGYVDFFTFLIPLYGLSLRLDAVQIGIL
Ga0207663_109455321	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNTAPSRPPASLYVAGPFSMGYVDFFTFLIPLYGLSLGFDAAEI
Ga0207677_115667872	3300026023	Miscanthus Rhizosphere	MNGSGTRSLTALYVAAPFSMGYVDFYTFLMPLYALSL
Ga0208366_10146991	3300027073	Forest Soil	MPRLRSRPPASLYVAGPFAMGYTEFYNFLIPLYGL
Ga0209655_100600733	3300027767	Bog Forest Soil	MPSLRSGPPASLYVAGPFAQGYTEVYNFLIPLYGLSLGMSAGKIGMLV
Ga0209040_103279403	3300027824	Bog Forest Soil	MPSFRSQPPASLYVAGPFAMGYTEFYNFLIPLYGL
Ga0209693_101592412	3300027855	Soil	MNTARPKPPASLYLAGPFSMGYLDFFTFLIPLYGLSLGLDAAEIG
Ga0209275_103140392	3300027884	Soil	MSAAPSRPPASLYVAGPFSMGYVDFFTFLIPLYGLSLGFDAVEI
Ga0209275_106160351	3300027884	Soil	MNTARPKPPASLYLAGPFSMGYLDFFTFLIPLYGLSLGLDAVEIGILVGARSKS
Ga0222749_100195451	3300029636	Soil	MSASRSRPPASLYVAGPFSMGYVDFFTFLIPLYALSLGLDA
Ga0318516_102053471	3300031543	Soil	MTAGPPRPPASIYVAGLFAMGYTQFYTFLIPLYGLAVGL
Ga0318541_101961403	3300031545	Soil	MTPGPSRPPASIYIAGLFAMGYTEFYTFLIPLYGLSLGMSAGEIGML
Ga0318538_100875973	3300031546	Soil	MTPGPSRPPASIYIAGLFAMGYTEFYTFLIPLYGLSLV
Ga0318538_101036943	3300031546	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYSLSLGM
Ga0318571_102285951	3300031549	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGKVGML
Ga0318528_105006102	3300031561	Soil	MTPGPSRPPASIYIAGLFAMGYTEFYTFLIPLYGFSLGMS
Ga0318528_105934951	3300031561	Soil	MAHFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLG
Ga0318528_106798741	3300031561	Soil	MVRFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGQIG
Ga0318515_107064921	3300031572	Soil	MSGSRSRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASEIGILV
Ga0310915_100158481	3300031573	Soil	MSARGSRPPVSLYVAGPFSMGYVDFFTFLIPLYAL
Ga0310915_102800552	3300031573	Soil	MSLSRSRPPASLYVAGPFSMGYIDFYTFLIPLYGLS
Ga0318555_101657202	3300031640	Soil	MTPSPSRPPASIYITGLFAMGYTEFYTFLIPLYGLSLGMSAGEIGM
Ga0318555_102659881	3300031640	Soil	MTAGSPRPPASIYVVGPFSMGYVDFYTFLIPLYGLSLGLDASEI
Ga0318561_100576782	3300031679	Soil	MNASRPGSLASLYVAGPFSMGYVDFYTFLIPLYGLSLGFDASRIGILV
Ga0318560_100966282	3300031682	Soil	MNGSRSRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLNASE
Ga0310686_1174806371	3300031708	Soil	MNASRSSPLTPLYVAGPFSMGYVDFYTFLIPLYGLSLGFDA
Ga0306917_102151591	3300031719	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGM
Ga0306917_112773472	3300031719	Soil	MTPSPSRPPASIYIAGLFAMGYTEFYTFLIPLYGFSLGMSA
Ga0318501_100894293	3300031736	Soil	MAHFRSRLPASLYVAGPFAMGYTEYYNFLIPLYGLSLGMSASQIG
Ga0306918_100883311	3300031744	Soil	MNGSHPRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASEIGILVGGR
Ga0306918_110667682	3300031744	Soil	MTARAPRPPASMCVVGPFSMGYVDFYTFLIPLYGLSLGLDASEIGILVGGR
Ga0318502_106892741	3300031747	Soil	MNASRPGSLASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASRIGILV
Ga0318494_108655421	3300031751	Soil	MKTSRSHPLTSLYVAGPFSMGYIDFYTFLMPLYAL
Ga0318537_101447543	3300031763	Soil	MTAGSPRPPASIYVVGPFSMGYVDFYTFLIPLYGLS
Ga0318554_103735322	3300031765	Soil	MPDFRSRPPTSLYVAGPFAMGYTEFYNFLIPLYGL
Ga0318554_107558201	3300031765	Soil	MSVSRPRLPASLYVAGPFSMGYVDFYTFLIPLYGLLLG
Ga0318509_104203001	3300031768	Soil	MNGSHPRPPASLYVAGPFSMGYVDFYTFLIPLYGL
Ga0318546_100992933	3300031771	Soil	MSLSRSRPPASLYVAGQFSMGYIDFYTFLIPLYGL
Ga0318546_101186083	3300031771	Soil	MTPGPSRPPASIYIAGLFAMGYTEFYTFLIPLYGLSLVM
Ga0318546_107852241	3300031771	Soil	MARFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGQIG
Ga0318543_102097011	3300031777	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYSLSLGMS
Ga0318547_109772702	3300031781	Soil	MNASRAGPPASLYVAGSFSMGYVDFFTFLIPLYGLSR
Ga0318552_106878821	3300031782	Soil	MATIRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLS
Ga0318529_102798563	3300031792	Soil	MTPGPSRPPASIYIAGLFAMGYTEFYTFLIPLYGLSLGMS
Ga0318529_103993561	3300031792	Soil	MTAGSPRPPASIYVVGPFSMGYVDFYTFLIPLYGLSLGLDASEIGILV
Ga0318548_105186241	3300031793	Soil	MAIIRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGQIGM
Ga0318503_100813303	3300031794	Soil	MARFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLG
Ga0318503_102332982	3300031794	Soil	MTPSPSRPPASIYITGLFAMGYTEFYTFLIPLYGLSLGMSAGES
Ga0318550_103500551	3300031797	Soil	MPSIRSRPPASLYVAGPFAQGYTQLYNFLVPLYGLSLGLSAGEIGML
Ga0318565_102844183	3300031799	Soil	MTAGSPRPPASIYVVGPFSMGYVDFYTFLIPLYGLSLGLDASEIGV
Ga0318568_101239633	3300031819	Soil	MSLSRSRPPASLYVAWPFSMGYIDFYTFLIPLYGL
Ga0310917_104887072	3300031833	Soil	MPDFQSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAG
Ga0318512_103307421	3300031846	Soil	MAHFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGQIG
Ga0318512_104244561	3300031846	Soil	MSLSRSRPPASLYVAGPFSMGYIDFYTFLIPLYGLSLGLNA
Ga0318527_100957423	3300031859	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAG
Ga0318495_100186331	3300031860	Soil	MNASRAGPPASLYVAGPFSMGYVDFFTFLIPLYGLSRGLDASEIGILVG
Ga0318495_102647502	3300031860	Soil	MTRSPSRPPASIYITGLFAMGYTEFYTFLIPLYGLSLGMSA
Ga0318495_103982873	3300031860	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGEVGM
Ga0306919_105058922	3300031879	Soil	MNASRPGSLASLYVAGPFSMGYVDFYTFLIPLYGLSLGFDASRIGI
Ga0306919_108434112	3300031879	Soil	MAHFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGL
Ga0306919_114630302	3300031879	Soil	MVRFQSRLPASLYVAGPFAMGYTELYNFLIPLYGLSLGMSA
Ga0306925_104917962	3300031890	Soil	MVRFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGL
Ga0306925_110657522	3300031890	Soil	MNASRTGPPASLYVAGPFSMGYVDFFTFLIPLYGLSRGLDASEIGI
Ga0306925_117307513	3300031890	Soil	MATIRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGM
Ga0306925_117834501	3300031890	Soil	MPSVRSRPPASLYVAGPFAQGYTQLYNFLVPLYGLSL
Ga0306925_121989131	3300031890	Soil	MNVSGARPLTALYVAAPFSMGYVDFYTFLMPLYALSL
Ga0318551_100974822	3300031896	Soil	MFTRMSGSRPRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDA
Ga0318520_104369661	3300031897	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGL
Ga0318520_104970841	3300031897	Soil	MKTSRSHPLTSLYIAGPFSMGYVDFYTFLIPLYALSLGF
Ga0306923_102025621	3300031910	Soil	MNASRAGPPASLYVAGPFSMGYVDFFTFLIPLYGLSRGLDASEIG
Ga0306921_100307296	3300031912	Soil	MAHFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMS
Ga0306921_108970741	3300031912	Soil	MNGSGTRSLTALYVAAPFSMGYVDFYTFLMPLYALSLG
Ga0306921_122758172	3300031912	Soil	MTESPSRPPASVYLAGPFAMGYTEIYTFLIPLYGLSVRMTAGQ
Ga0310916_108416981	3300031942	Soil	MPEFPSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGM
Ga0310913_101476452	3300031945	Soil	MSGSRSRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASEIGILVGGRS
Ga0310909_101382191	3300031947	Soil	MPGFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGEV
Ga0310909_104415383	3300031947	Soil	MTPGPSRPPASIHVAGLFAMGYTQFYTFLIPLYGLSVGLSA
Ga0310909_105825591	3300031947	Soil	MNGSHPRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASEIGILVGGRS
Ga0310909_107459052	3300031947	Soil	MNASRTGPPASLYVAGPFSMGYVDFFTFLIPLYGLS
Ga0310909_110304091	3300031947	Soil	MVRFQSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGQIGML
Ga0310909_111312902	3300031947	Soil	MLGFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGEV
Ga0306926_114035572	3300031954	Soil	MKTSRSHPLTSLYVAGPFSMGYIDFYTFLMPLYALSLGFDASEIGIL
Ga0306926_116009982	3300031954	Soil	MPEFPSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGEVG
Ga0306926_120482361	3300031954	Soil	MPAASARPPASLYVTGPFSRGCVDFFTFLIPLYGLSLGLDAGEIGVLVGAKIQFTSA
Ga0307479_103843941	3300031962	Hardwood Forest Soil	MNASRAGPPASLYVAGPFSMGYVDFFTFLIPLYGLSRGLDASEI
Ga0306922_122423541	3300032001	Soil	MLGFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSL
Ga0318563_107843082	3300032009	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGEVGML
Ga0318505_105731811	3300032060	Soil	MSGSRPRPPASLYVAGPFSMGYVDFYTFLIPLYGLSLGLDASEIGIL
Ga0318504_105401741	3300032063	Soil	MPSVRSRPPASLYVAGPFAQGYTQLYNFLVPLYGLSLGL
Ga0318510_100040515	3300032064	Soil	MNASRPRSLASLYVAGPFSMGYVDFYTFLIPLYGLS
Ga0318524_102482501	3300032067	Soil	MNRSGTRSLAALYVAAPFSMGYVDFYTFLMPLYAL
Ga0318553_101374813	3300032068	Soil	MPEFRSRPPASLYVAGPFAMGYTEFYNFLIPLYSLSLGMSAG
Ga0306924_116470423	3300032076	Soil	MLGFRSRPPASLYVAGPFAMGYTEFYNFLIPLYDLSL
Ga0306924_117491771	3300032076	Soil	MATIRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSA
Ga0318577_104768951	3300032091	Soil	MPSVRSRPPASLYVAGPFAQGYTQLYNFLVPLYGLSLGLSAGEI
Ga0318540_103057562	3300032094	Soil	MARFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGM
Ga0311301_117032811	3300032160	Peatlands Soil	MNASRSGSFASLYVAGPLSMGYVDFYTFLIPLYGLSLGFD
Ga0307472_1003453012	3300032205	Hardwood Forest Soil	MNASRAGPPASLYVAGPFSMGYVDFFTFLIPLYGLSLGLDAVEIGILVGAR
Ga0306920_1004513913	3300032261	Soil	MTHAPPRAPASIYVAGLFAMGYTEFYIFLIPLYGL
Ga0306920_1008911131	3300032261	Soil	MPDFRSRPSASLYVGPFAMGYTEFYNFLIPLYGLSLGMSAGEVGML
Ga0306920_1015386681	3300032261	Soil	MTPPPAHPPASIYVAGPFSMGYVDFYTFLIPLYGLSLGLD
Ga0306920_1024486533	3300032261	Soil	MNASRSRSLISLYVAGPFSMGYVDFYTFLIPLYGLSLG
Ga0306920_1025682791	3300032261	Soil	MKTSRSHPLTSLYVAGPFSMGYLDFYTFLIPLYALSLGFDASEIGIL
Ga0306920_1039306432	3300032261	Soil	MTTSPSRPPASVYVAGPFAMGYTEIYTFLIPLYGL
Ga0335079_112349891	3300032783	Soil	MHASVTRPLTALYVAGPFSMGYADFYTFLMPLYALSLGFDAAE
Ga0318519_101255153	3300033290	Soil	MARFRSRLPASLYVAGPFAMGYTEFYNFLIPLYGLSLGMSAGQI
Ga0310810_105164254	3300033412	Soil	MSEVSSRPPAALYAAGPFSMGYVDFFTFLIPLYGLSLGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029829

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences