Metagenome Family F030223

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F030223
Family Type	Metagenome
Number of Sequences	186
Average Sequence Length	49 residues
Representative Sequence	SHVALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR
Number of Associated Samples	133
Number of Associated Scaffolds	186

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.54 %
% of genes near scaffold ends (potentially truncated)	98.92 %
% of genes from short scaffolds (< 2000 bps)	79.03 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.882 % of family members)
Environment Ontology (ENVO)	Unclassified (48.925 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.065 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.13% β-sheet: 22.78% Coil/Unstructured: 67.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 186 Family Scaffolds
PF12710	HAD	30.11
PF13419	HAD_2	16.13
PF01928	CYTH	7.53
PF13242	Hydrolase_like	5.91
PF00326	Peptidase_S9	4.30
PF01648	ACPS	3.23
PF00246	Peptidase_M14	2.15
PF02897	Peptidase_S9_N	1.08
PF01189	Methyltr_RsmB-F	0.54
PF01790	LGT	0.54
PF12697	Abhydrolase_6	0.54
PF02911	Formyl_trans_C	0.54
PF13442	Cytochrome_CBB3	0.54
PF02699	YajC	0.54
PF00877	NLPC_P60	0.54

COG ID	Name	Functional Category	% Frequency in 186 Family Scaffolds
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	1.08
COG1770	Protease II	Amino acid transport and metabolism [E]	1.08
COG0144	16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family	Translation, ribosomal structure and biogenesis [J]	0.54
COG0223	Methionyl-tRNA formyltransferase	Translation, ribosomal structure and biogenesis [J]	0.54
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.54
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.54
COG1862	Protein translocase subunit YajC	Intracellular trafficking, secretion, and vesicular transport [U]	0.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	63.44 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	63.44 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.14 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	3.23 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.14 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.23 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9.14 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.23 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	4.84 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.23 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.08 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4.84 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.23 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.54 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.54 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10202138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	601	Open in IMG/M
3300002908\|JGI25382J43887_10467329	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300002916\|JGI25389J43894_1017918	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300004153\|Ga0063455_100131516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1107	Open in IMG/M
3300004463\|Ga0063356_101853987	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005166\|Ga0066674_10450901	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005167\|Ga0066672_10243301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1157	Open in IMG/M
3300005171\|Ga0066677_10162751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1229	Open in IMG/M
3300005174\|Ga0066680_10215790	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300005175\|Ga0066673_10019713	All Organisms → cellular organisms → Bacteria	3084	Open in IMG/M
3300005175\|Ga0066673_10115334	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300005175\|Ga0066673_10445218	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005175\|Ga0066673_10891635	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005177\|Ga0066690_10014393	All Organisms → cellular organisms → Bacteria	4200	Open in IMG/M
3300005178\|Ga0066688_10763059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	608	Open in IMG/M
3300005179\|Ga0066684_10175751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1373	Open in IMG/M
3300005186\|Ga0066676_10978810	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005187\|Ga0066675_10832790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	697	Open in IMG/M
3300005440\|Ga0070705_100032452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2901	Open in IMG/M
3300005445\|Ga0070708_100664025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	982	Open in IMG/M
3300005445\|Ga0070708_101278420	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005451\|Ga0066681_10604504	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005468\|Ga0070707_100016926	All Organisms → cellular organisms → Bacteria	6848	Open in IMG/M
3300005518\|Ga0070699_102141680	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005540\|Ga0066697_10644984	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005549\|Ga0070704_100014423	All Organisms → cellular organisms → Bacteria	4936	Open in IMG/M
3300005552\|Ga0066701_10548241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	710	Open in IMG/M
3300005553\|Ga0066695_10510244	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005553\|Ga0066695_10702981	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	592	Open in IMG/M
3300005555\|Ga0066692_10651693	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005557\|Ga0066704_10022144	All Organisms → cellular organisms → Bacteria	3766	Open in IMG/M
3300005557\|Ga0066704_10715360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	629	Open in IMG/M
3300005558\|Ga0066698_10102753	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300005558\|Ga0066698_10202790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1357	Open in IMG/M
3300005598\|Ga0066706_10188887	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300005598\|Ga0066706_10579743	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005598\|Ga0066706_10662691	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005713\|Ga0066905_100020899	All Organisms → cellular organisms → Bacteria	3479	Open in IMG/M
3300006031\|Ga0066651_10047386	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300006031\|Ga0066651_10541202	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006034\|Ga0066656_10031786	All Organisms → cellular organisms → Bacteria	2938	Open in IMG/M
3300006034\|Ga0066656_10676107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	664	Open in IMG/M
3300006034\|Ga0066656_11052438	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300006046\|Ga0066652_100092159	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300006173\|Ga0070716_100003723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7216	Open in IMG/M
3300006794\|Ga0066658_10091103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1419	Open in IMG/M
3300006796\|Ga0066665_10840676	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300006796\|Ga0066665_11372692	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006797\|Ga0066659_11823941	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006806\|Ga0079220_10183528	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300006806\|Ga0079220_10378608	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300006845\|Ga0075421_101760829	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006852\|Ga0075433_11838336	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006903\|Ga0075426_10853010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	686	Open in IMG/M
3300009012\|Ga0066710_101069468	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1247	Open in IMG/M
3300009012\|Ga0066710_103802358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	566	Open in IMG/M
3300009012\|Ga0066710_104059805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300009089\|Ga0099828_11091003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	709	Open in IMG/M
3300009090\|Ga0099827_10055556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2997	Open in IMG/M
3300009090\|Ga0099827_10085083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2480	Open in IMG/M
3300009090\|Ga0099827_10198501	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1667	Open in IMG/M
3300009090\|Ga0099827_10636152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	921	Open in IMG/M
3300009090\|Ga0099827_11060044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	704	Open in IMG/M
3300009090\|Ga0099827_11415448	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	605	Open in IMG/M
3300009137\|Ga0066709_101712788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	890	Open in IMG/M
3300009147\|Ga0114129_11472266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	838	Open in IMG/M
3300009147\|Ga0114129_13063825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	548	Open in IMG/M
3300009162\|Ga0075423_10082503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3352	Open in IMG/M
3300010301\|Ga0134070_10178065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	772	Open in IMG/M
3300010301\|Ga0134070_10310492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	603	Open in IMG/M
3300010304\|Ga0134088_10361944	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	705	Open in IMG/M
3300010320\|Ga0134109_10203014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	732	Open in IMG/M
3300010320\|Ga0134109_10221972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	704	Open in IMG/M
3300010322\|Ga0134084_10006086	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300010329\|Ga0134111_10076446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1256	Open in IMG/M
3300010329\|Ga0134111_10527739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	521	Open in IMG/M
3300010336\|Ga0134071_10246801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300010359\|Ga0126376_11606393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	682	Open in IMG/M
3300010403\|Ga0134123_11323564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	757	Open in IMG/M
3300011271\|Ga0137393_10284903	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1405	Open in IMG/M
3300011428\|Ga0137456_1034583	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300012096\|Ga0137389_10132791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2020	Open in IMG/M
3300012199\|Ga0137383_10608240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	799	Open in IMG/M
3300012199\|Ga0137383_11079373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	582	Open in IMG/M
3300012200\|Ga0137382_10572867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	805	Open in IMG/M
3300012201\|Ga0137365_10830551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	675	Open in IMG/M
3300012202\|Ga0137363_10940513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	734	Open in IMG/M
3300012202\|Ga0137363_11574502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300012203\|Ga0137399_10691070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	859	Open in IMG/M
3300012207\|Ga0137381_10170488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1879	Open in IMG/M
3300012207\|Ga0137381_10311329	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1372	Open in IMG/M
3300012207\|Ga0137381_10374327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1242	Open in IMG/M
3300012207\|Ga0137381_11248371	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012209\|Ga0137379_10001997	All Organisms → cellular organisms → Bacteria	18814	Open in IMG/M
3300012209\|Ga0137379_10830079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	829	Open in IMG/M
3300012211\|Ga0137377_10158557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2169	Open in IMG/M
3300012349\|Ga0137387_10067111	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300012349\|Ga0137387_10168423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1566	Open in IMG/M
3300012349\|Ga0137387_10258066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1257	Open in IMG/M
3300012349\|Ga0137387_10975133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	609	Open in IMG/M
3300012359\|Ga0137385_10001725	All Organisms → cellular organisms → Bacteria	18476	Open in IMG/M
3300012360\|Ga0137375_11037763	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012361\|Ga0137360_10469461	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1068	Open in IMG/M
3300012361\|Ga0137360_11782903	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300012363\|Ga0137390_10193041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2023	Open in IMG/M
3300012683\|Ga0137398_10018594	All Organisms → cellular organisms → Bacteria	3725	Open in IMG/M
3300012683\|Ga0137398_10796927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	660	Open in IMG/M
3300012917\|Ga0137395_10477219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	897	Open in IMG/M
3300012925\|Ga0137419_10010792	All Organisms → cellular organisms → Bacteria	4939	Open in IMG/M
3300012927\|Ga0137416_10690404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	896	Open in IMG/M
3300012927\|Ga0137416_11216874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	678	Open in IMG/M
3300012927\|Ga0137416_12169725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300012930\|Ga0137407_10400064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1271	Open in IMG/M
3300014154\|Ga0134075_10054713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1653	Open in IMG/M
3300014166\|Ga0134079_10289822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	723	Open in IMG/M
3300014166\|Ga0134079_10565262	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300015357\|Ga0134072_10213993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	674	Open in IMG/M
3300015358\|Ga0134089_10004612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4115	Open in IMG/M
3300015358\|Ga0134089_10006442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3610	Open in IMG/M
3300015371\|Ga0132258_13751359	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1036	Open in IMG/M
3300017654\|Ga0134069_1006565	All Organisms → cellular organisms → Bacteria	3280	Open in IMG/M
3300017654\|Ga0134069_1251277	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	615	Open in IMG/M
3300017659\|Ga0134083_10203258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	818	Open in IMG/M
3300017997\|Ga0184610_1162623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	736	Open in IMG/M
3300018031\|Ga0184634_10562758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300018063\|Ga0184637_10078384	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2025	Open in IMG/M
3300018071\|Ga0184618_10311879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	670	Open in IMG/M
3300018074\|Ga0184640_10239087	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300018074\|Ga0184640_10487551	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300018079\|Ga0184627_10030093	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2733	Open in IMG/M
3300018431\|Ga0066655_10924012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	598	Open in IMG/M
3300018431\|Ga0066655_11040537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	568	Open in IMG/M
3300018431\|Ga0066655_11115349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300018431\|Ga0066655_11267184	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300018433\|Ga0066667_10061809	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300018433\|Ga0066667_11000753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	721	Open in IMG/M
3300018468\|Ga0066662_12199747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	579	Open in IMG/M
3300018468\|Ga0066662_12878202	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300018482\|Ga0066669_10042042	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300018482\|Ga0066669_12324313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	512	Open in IMG/M
3300019360\|Ga0187894_10230861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	886	Open in IMG/M
3300019877\|Ga0193722_1003348	All Organisms → cellular organisms → Bacteria	3933	Open in IMG/M
3300019879\|Ga0193723_1151007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	622	Open in IMG/M
3300021073\|Ga0210378_10224641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	714	Open in IMG/M
3300024347\|Ga0179591_1063420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2428	Open in IMG/M
3300025324\|Ga0209640_10931561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	674	Open in IMG/M
3300026297\|Ga0209237_1046146	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300026300\|Ga0209027_1003707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5744	Open in IMG/M
3300026307\|Ga0209469_1136431	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300026308\|Ga0209265_1044484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1374	Open in IMG/M
3300026310\|Ga0209239_1210456	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	690	Open in IMG/M
3300026310\|Ga0209239_1292221	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300026313\|Ga0209761_1265544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	636	Open in IMG/M
3300026314\|Ga0209268_1047458	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1382	Open in IMG/M
3300026317\|Ga0209154_1030011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2500	Open in IMG/M
3300026318\|Ga0209471_1012204	All Organisms → cellular organisms → Bacteria	4462	Open in IMG/M
3300026324\|Ga0209470_1310788	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300026325\|Ga0209152_10171399	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300026326\|Ga0209801_1102983	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1234	Open in IMG/M
3300026326\|Ga0209801_1251797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	668	Open in IMG/M
3300026327\|Ga0209266_1248673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	574	Open in IMG/M
3300026332\|Ga0209803_1088747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1282	Open in IMG/M
3300026334\|Ga0209377_1131309	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	986	Open in IMG/M
3300026524\|Ga0209690_1010371	All Organisms → cellular organisms → Bacteria	4998	Open in IMG/M
3300026527\|Ga0209059_1238754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	609	Open in IMG/M
3300026530\|Ga0209807_1023707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2980	Open in IMG/M
3300026536\|Ga0209058_1089481	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1589	Open in IMG/M
3300026548\|Ga0209161_10085125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1946	Open in IMG/M
3300026548\|Ga0209161_10190012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1148	Open in IMG/M
3300026550\|Ga0209474_10006401	All Organisms → cellular organisms → Bacteria	9894	Open in IMG/M
3300026557\|Ga0179587_10826064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	611	Open in IMG/M
3300027725\|Ga0209178_1043970	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1424	Open in IMG/M
3300027765\|Ga0209073_10343209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300027875\|Ga0209283_10420526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	869	Open in IMG/M
3300027882\|Ga0209590_10035352	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2679	Open in IMG/M
3300027882\|Ga0209590_10867376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300028138\|Ga0247684_1026312	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	923	Open in IMG/M
3300028536\|Ga0137415_11299095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	545	Open in IMG/M
3300028807\|Ga0307305_10562708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300028814\|Ga0307302_10315101	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	770	Open in IMG/M
3300028828\|Ga0307312_10618604	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300028878\|Ga0307278_10290904	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300031720\|Ga0307469_11999434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	562	Open in IMG/M
3300031965\|Ga0326597_11564991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	630	Open in IMG/M
3300032180\|Ga0307471_100703700	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300032180\|Ga0307471_102652276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.70%
Host-Associated	Host-Associated	4.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.86%
Aquatic	Environmental → Aquatic	4.84%
Plants	Host-Associated → Plants	4.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.32%
Sediment	Environmental → Aquatic → Sediment	4.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.08%
Freshwater	Environmental → Aquatic → Freshwater	0.54%
Cave	Environmental → Terrestrial → Cave	0.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.26%
Loam	Environmental → Terrestrial → Soil → Loam	8.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.54%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	38.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.15%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.54%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.54%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.15%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.54%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.54%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.54%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.54%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J37095_102021381	3300002562	Grasslands Soil	AGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRVNVRR*
JGI25382J43887_104673291	3300002908	Grasslands Soil	VSHVALWAGAGRVVHAVLACGGVASEDLFTDAPRMASLRERLVAVRRLKA*
JGI25389J43894_10179181	3300002916	Grasslands Soil	VHSALARGGVGSDDLLGETPAARRLRDMLVAVRRLNVRR*
Ga0063455_1001315163	3300004153	Soil	SHVALWAGAGRIVHSALARGGVGSDNLYGDEPRMRRLRENLVGVRRVL*
Ga0063356_1018539871	3300004463	Arabidopsis Thaliana Rhizosphere	LLFFTEKGRVSHVAFWAGAGRIVHAALSRGGVGGDHLLGDEPRMVRLRENLVGVRRLSG*
Ga0066674_104509011	3300005166	Soil	VALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR*
Ga0066672_102433011	3300005167	Soil	GAGRIVHAALSRGGVASDHLFGDTPGARRLRDFLVAVRRVNVRP*
Ga0066677_101627513	3300005171	Soil	LLFFAERGRVSHVALWAGAGRIVHSALSRGGVGGDHLFGDEPRMVRMREGLVGIRRLGG*
Ga0066680_102157901	3300005174	Soil	AGAGRIVHSALARGGVASDDLLGDAPGAKRLRDMLVAVRRLNVRR*
Ga0066673_100197131	3300005175	Soil	SHVALWAGAGHIVHSALSRGGVVADDLFADTPAMRRLREFLVAVRRVEAANR*
Ga0066673_101153341	3300005175	Soil	SHVALWAGAGHIVHSALSRGGVVADDLFADTPAMRRLREYLVAVRRVETSG*
Ga0066673_104452181	3300005175	Soil	RGRVSHVALWAGAGRIVHSALSRGGVGGDHLFGDEPRMQRLRDGLVGVRRL*
Ga0066673_108916351	3300005175	Soil	LFFAEEGKVSHVALWLGAGRVAHSALSRGGVAVDDLTAQTPLARRLRDQLVAVRRIV*
Ga0066690_100143936	3300005177	Soil	DGRRISHVALWAGSGHVVHSALSRGGVASDDLFAHTPAAGRLRDMLVAVRRPETSRG*
Ga0066688_107630592	3300005178	Soil	AGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRVNVRR*
Ga0066684_101757511	3300005179	Soil	WSGAGRIVHSALSRGGVTSDDLFADTPTAKRLREYLVAVRRLGG*
Ga0066676_109788102	3300005186	Soil	HVALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRVNVRR*
Ga0066675_108327902	3300005187	Soil	HAALSRGGVGSDDLLGETPGAKRLRDMLVAVRRVAVPRR*
Ga0070705_1000324521	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VSHVALWAGAGRIVHAALARGGVGSDDLLGETPGARRLRDMLVAVRRMTVRR*
Ga0070708_1006640251	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LHVALWSGGGAGRIVHAALSRGGVGGDDLFGAEPRMVKLRANLVGVRRCV*
Ga0070708_1012784202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FFAERGRVSHVALWAGAGRIVHAALSRGGVGGDHLFGDEPRMVRLRESLVGVRRPG*
Ga0066681_106045041	3300005451	Soil	FFAERGRVSHVALWAGAGRIVHSALSRGGVGGDNLFGPEPRMVRLRECLVGARRL*
Ga0070707_10001692610	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AERGRVSHVALWAGAGRIVHAALSRGGVGGDHLFGDEPRMVRMRENLVGVRRLVG*
Ga0070699_1021416802	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HVALWAGAGRIVHAALARGGVGSDDLLGETPGARRLRDMLVAVRRMTVRR*
Ga0066697_106449841	3300005540	Soil	ALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR*
Ga0070704_1000144236	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AGRIVHSALSRGGVGGDNLLGPEPRMVRLRENLVGVRRLGG*
Ga0066701_105482412	3300005552	Soil	AGRIVHSALARGGVASDDLLGETPAAKRLRDFLVAVRRINVRR*
Ga0066695_105102441	3300005553	Soil	GRIVHSALSRGGVGGDRLFGDEPRMVRLRESLVGVRRL*
Ga0066695_107029812	3300005553	Soil	WAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR*
Ga0066692_106516931	3300005555	Soil	RGRVSHVALWSGAGHVVHAALSRGGVASDHLFGDEPRMRRLREILVGVRRFGG*
Ga0066704_100221441	3300005557	Soil	ERGRVSHVALWSGAGHVVHAALSRGGVASDHLFGDEPRMRRLREILVGVRRFGG*
Ga0066704_107153602	3300005557	Soil	WAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRVNVRR*
Ga0066698_101027531	3300005558	Soil	LLFFAERGRVSHVALWAGAGRIVHSALGRGGVGGDHLFGDEPRMVRLLAGLVGVRRL*
Ga0066698_102027903	3300005558	Soil	ALWLGAGRVAHSALSRGGVAVDDLNAQTPLAKRLRDQLVAVRRIV*
Ga0066706_101888871	3300005598	Soil	FADGRRISHVALWAGAGRIVHSALSRGGVVADDLLADTPAMRRLREYLVAVRRVEVANR*
Ga0066706_105797431	3300005598	Soil	GLRVTHVALWAGAGRVVHAVLACGGVASEDLFTDAPRMASLRERLVAVRRLKA*
Ga0066706_106626911	3300005598	Soil	CFADGLRVAHVALWAGAGRIVHAALARGGVASEDLFGDAPRMASLRERLVAVRRLKP*
Ga0066905_1000208991	3300005713	Tropical Forest Soil	RVSHVALWAGAGTIVHSALSRGGVGSDRLFGDEPRMVRMRESLVGVRRL*
Ga0066651_100473861	3300006031	Soil	VSHVALWAGAGRIVHSALSRGGVGGDHLFGDEPRMVRMRDNLVGVRRLG*
Ga0066651_105412022	3300006031	Soil	RGRVSHVALWAGGGRIVHSALSRGGVGSDHLYGDEPRMRLLRESMVGVRRL*
Ga0066656_100317861	3300006034	Soil	RISHVALWAGAGRIVHAALSRGGVGSDDLLGETPAAKRLRDFLVAVRRMNLRR*
Ga0066656_106761072	3300006034	Soil	AGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR*
Ga0066656_110524381	3300006034	Soil	LFFVERGQVSHVALWAGAGRIVHSALSRGGVGSDDLFGNEPRMVRLRANLVGVRRM*
Ga0066652_1000921595	3300006046	Soil	KVSHVALWLGAGRIAHSALSRGGVAADALDADTPLARRLRQQLVAVRRVV*
Ga0070716_1000037239	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GRIVHSALSRGGVGSDDLLGETPGAKRLRDLLVAVRRPNVRR*
Ga0066658_100911031	3300006794	Soil	HVALWAGAGRIVHSALGRGGVGGDHLFGSEPRMARMRDSLVGVRRL*
Ga0066665_108406762	3300006796	Soil	AGAGRIVHAALARGGVGSDDLLADSAEGKRLRDGLVAVRRVR*
Ga0066665_113726922	3300006796	Soil	VAHVALWAGAGRIVHAALARGGVASEDLFADAPRMTALREGLVAVRRLRP*
Ga0066659_118239411	3300006797	Soil	IVHSALSRGGVGGDHLFGDEPRMVRMREGLVGIRRLGG*
Ga0079220_101835281	3300006806	Agricultural Soil	RVSHVALWAGAGRIVHSALARGGVGSDDLFADTPGAKRLREFLVAVRRIFLP*
Ga0079220_103786082	3300006806	Agricultural Soil	GHRVSHVALWAGVGRIVHSALARGGVGSDDLCADTTGAKRLREFLVAVRRLDG*
Ga0075421_1017608291	3300006845	Populus Rhizosphere	RIVHSALSRGGVGGDDLFSGEPRMVKLRANLVGVRRCA*
Ga0075433_118383361	3300006852	Populus Rhizosphere	HVALWAGAGRIVHSALARGGVGSDDLFAGTPGAKRLREFLVAVRRVGQSDGRTA*
Ga0075426_108530101	3300006903	Populus Rhizosphere	SALSRGGVASDALLDDAPGARRLREMLVAVRRVERLDG*
Ga0066710_1010694681	3300009012	Grasslands Soil	HRISHVGLWAGAGRVVHAALSRGGVGSDDLLGDTPGAKRLRDFLVAVRRPVVSKR
Ga0066710_1038023581	3300009012	Grasslands Soil	HVALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR
Ga0066710_1040598052	3300009012	Grasslands Soil	RISHVALWAGAGRIVHAALSRGGVASDDLFADIPTAKRLREYLVAVRRIAGIAG
Ga0099828_110910032	3300009089	Vadose Zone Soil	VSHVALWAGAGRIVHSALSRGGVGSDDLLGETPGANRLRDLLVAVRRPNVRR*
Ga0099827_100555566	3300009090	Vadose Zone Soil	SHVALWAGAGRIVHAALSRGGVASDDLFADIPTAKRLREYLVAVRRIAGIAG*
Ga0099827_100850833	3300009090	Vadose Zone Soil	ADGLRVSHVALWAGAGRIVHAALACGGVASEDLLAEAPRMAALRQRLVAVRRLKP*
Ga0099827_101985014	3300009090	Vadose Zone Soil	GAGRVVHSALSRGGVAVDDLSTESPLVKRLREQLVAVRRIV*
Ga0099827_106361521	3300009090	Vadose Zone Soil	HVALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR*
Ga0099827_110600442	3300009090	Vadose Zone Soil	VSHVALWAGAGRIVHSALSRGGVARDDLLGDTPLARRLREGLVAVRRLAPER*
Ga0099827_114154481	3300009090	Vadose Zone Soil	VALWAGAGRIVHSALSRGGVGIDDLFGDEPRMVRLRTNLVGVRRCA*
Ga0066709_1017127881	3300009137	Grasslands Soil	IVHAALSRGGVASDDLLGETPGAKRLRDFLVAVRRLNVRR*
Ga0114129_114722662	3300009147	Populus Rhizosphere	LLFFADAGRVGHVALWAGAGRIVHATLSRGGVVTEELYGDVPRLRRLRDHLVGVRRMERR
Ga0114129_130638252	3300009147	Populus Rhizosphere	WAGAGRIVHSTLSRGGVASDDLFGSEPRMTRLRANLVGVRRCG*
Ga0075423_100825031	3300009162	Populus Rhizosphere	ERGRVSHVALWAGAGRIVHSALSRGGVGGDHLFGDEPRMVRLRDNLVGVRRM*
Ga0134070_101780652	3300010301	Grasslands Soil	LFFAERGRVSHVALWAGAGRIVHSALSRGGVGSDHLYGDEPRMRSLRESMVGVRRL*
Ga0134070_103104922	3300010301	Grasslands Soil	AGAGRIVHSALSRGGVGGDRLFGDEPRMVRLRESLVGVRRL*
Ga0134088_103619441	3300010304	Grasslands Soil	FAGGMRVDHVALWAGAGRVVHSALSRGGVVMDDYFGDTPIGRRLRQEIVAVRRVYISPQ*
Ga0134109_102030142	3300010320	Grasslands Soil	IVHAALSRGGVGSDDLLGETPAAKRLRDFLVAVRRMNLRR*
Ga0134109_102219722	3300010320	Grasslands Soil	GPRVTHVALWAGAGRIVHAALARGGVGSDDLFASSAEAKRLRDGLVAVRRVS*
Ga0134084_100060866	3300010322	Grasslands Soil	ADGRRISHVALWAGTGHIVHSALSRGGVASDDLFADTPAAQRLRGLLVAVRRPETSRS*
Ga0134111_100764463	3300010329	Grasslands Soil	VALWAGAGRIVHFALSRGGVASDDLLGDTPGAKRLRDFLVAVRRPVVAKR*
Ga0134111_105277391	3300010329	Grasslands Soil	LFFAERGRVSHVALWAGAGRIVHSALSLGGVGGDHLFGPEPRMVRLRENLVGVRRLGG*
Ga0134071_102468012	3300010336	Grasslands Soil	VALWAGAGRIVHAALARGGVGSDDLFADSAEGKRLRDGLVAVRRVR*
Ga0126376_116063932	3300010359	Tropical Forest Soil	AERERISHVALWAGAGRIVHSTLARGGVVSEDLFADQARLAKLREQLVVVRRVER*
Ga0134123_113235641	3300010403	Terrestrial Soil	IVHSALSRGGVGSDDLLGETPGAKRLRDSLVAVRRPNVRR*
Ga0137393_102849033	3300011271	Vadose Zone Soil	WAGAGRIVHSALARGGVGSDDLLGDMPGAKRLRDMLVAVRRLTVPRR*
Ga0137456_10345831	3300011428	Soil	HVALWAGAGRIVHAAVARGGVASDDLLGDSPHARRLRSGLVAVRRM*
Ga0137389_101327911	3300012096	Vadose Zone Soil	GAGRIVHAALSRGGVGGDHLFGDEPRMVRLRENLVGVKRLSG*
Ga0137383_106082402	3300012199	Vadose Zone Soil	VALWLGAGRIAHSALSRGGVGSDALDADTALARRLRQQLVAVRRIV*
Ga0137383_110793731	3300012199	Vadose Zone Soil	HVALWAGAGRIVHSALARGGVGSDDLLGETPGTRRLKDMLVAVRRLNVRR*
Ga0137382_105728672	3300012200	Vadose Zone Soil	VALWAGAGHIVHSALSRGGVVADNLLADTPAMRRLREYLVAVRRIGG*
Ga0137365_108305511	3300012201	Vadose Zone Soil	IVHAALARGGVGSDDLFADSPEAKRLRDGLVAVRRVR*
Ga0137363_109405131	3300012202	Vadose Zone Soil	RGGVGSDDLLGDTPGAKRLRDMLVAVRRLTVPRR*
Ga0137363_115745021	3300012202	Vadose Zone Soil	RGGGGSDDLLGETPGAKRLRDLLVAVRRLAVPKR*
Ga0137399_106910702	3300012203	Vadose Zone Soil	FFTERGRVSHVAFWAGAGRIVHSALSRGGVGGDHLFGDEPRMMRLRESLVGVRRFR*
Ga0137381_101704881	3300012207	Vadose Zone Soil	ADGPRVTHVALWAGAGRIVHAALARGGVGSDDLFASSAEAKRLRDGLVAVRRVS*
Ga0137381_103113293	3300012207	Vadose Zone Soil	GRVSHVALWAGAGRIVHSALSRGGVGVDDLFGSEPRMVRLRANLVGVRRF*
Ga0137381_103743271	3300012207	Vadose Zone Soil	ALSRGGVASDDLLGETPAAKRLRDFLVAVRRINVRR*
Ga0137381_112483712	3300012207	Vadose Zone Soil	ERGRVSHVALWAGAGRIVHSALGRGGVGGDHLFGDEPRLVRLRDNLVGVRRPDT*
Ga0137379_1000199723	3300012209	Vadose Zone Soil	GHRISHVALWSGAGRIVHSALSRGGVTSDDLLADTPTAKRLRDFLVAVRRVERSRQ*
Ga0137379_108300792	3300012209	Vadose Zone Soil	AHSALSRGGVASDALDADTSLARRLRQQLVAVRRIV*
Ga0137377_101585571	3300012211	Vadose Zone Soil	LSRGGVASDHLFGDEPRMKRLRENLVGVRRPIADTR*
Ga0137387_100671115	3300012349	Vadose Zone Soil	WAGAGRIVHAALSRGGVGSDDLLGETPAAKRLRDFLVAVRRINVRR*
Ga0137387_101684234	3300012349	Vadose Zone Soil	WAGAGRIVHAVLSRGGVASDDLLGETPGAKRLRDFLVAVRRPVGPKR*
Ga0137387_102580661	3300012349	Vadose Zone Soil	RIVHSALSRGGVTSDDLLADTPTAKRLRDFLVAVRRVERSRQ*
Ga0137387_109751331	3300012349	Vadose Zone Soil	SHVALWAGTGRIVHSALSRGGVGGDNLFGDEPRMVRLRDNLVGVRRPT*
Ga0137385_1000172523	3300012359	Vadose Zone Soil	SHVALWAGAGRIVHAALACGGVASEDLFSDDPRMAGLRERLVAVRRLKP*
Ga0137375_110377632	3300012360	Vadose Zone Soil	CFADGHRISHVALWAGAGRIVHSALSRGGVASDDLFADTPAAKRLRDFLVAVRRPGVPKR
Ga0137360_104694611	3300012361	Vadose Zone Soil	IVHSALGRGGVGGDHLFGDEPRLVRLRDNLVGVRRL*
Ga0137360_117829032	3300012361	Vadose Zone Soil	LFFAERGRVSHVALWAGAGRIVHAALSRGGVGGDHLFGDEPRMVRLRENLVGVKRLSG*
Ga0137390_101930414	3300012363	Vadose Zone Soil	GRVSHVALWAGAGRIVHAALSRGGVGGDHLFGDEPRMVRLRENLVGVKRLSG*
Ga0137398_100185941	3300012683	Vadose Zone Soil	VALWAGAGRIVHSALARGGVGSDDLLGDTPGAKRLRDMLVAVRRLTVPRR*
Ga0137398_107969271	3300012683	Vadose Zone Soil	VALWAGAGRIVHSALARGGVGSDDLLGDTPGAKRLRDMLVEVRRLTVPRR*
Ga0137395_104772192	3300012917	Vadose Zone Soil	AGAGRIVHSALSRGGVGGDHLFGDEPRMVRLRESIVGVRRPG*
Ga0137419_100107926	3300012925	Vadose Zone Soil	FFAERGRVAHVALWAGAGRIVHSALGRGGVGGDHLLGAEPRMVRLLAGLVGVRRLGG*
Ga0137416_106904042	3300012927	Vadose Zone Soil	VHSALARGGVGSDDLLGDTPGAKRLRDMLVAVRRLTVPRR*
Ga0137416_112168742	3300012927	Vadose Zone Soil	DGRRISHVALWAGAGRIVHSALARGGVGSDDVLGDTPGAKRLRDMLVAVRRLNLRR*
Ga0137416_121697251	3300012927	Vadose Zone Soil	VALWAGAGRIVHSALSRGGVASDDLLGDTPGAKRLRDMLVAVRRLNLRR*
Ga0137407_104000643	3300012930	Vadose Zone Soil	AGRIVHSALSRGGVGSDDLLGEAPGAKRLRDMLVAVRRVNVRR*
Ga0134075_100547131	3300014154	Grasslands Soil	QVSHVALWAGAGRIVHSALSRGGVGSDDLFGNEPRMVRLRANLVGVRRM*
Ga0134079_102898222	3300014166	Grasslands Soil	ERGRVSHVALWAGAGHIVHAALSRGGVASDHLFGDEPRMKRLRENLVGVRRPTA*
Ga0134079_105652622	3300014166	Grasslands Soil	SHVALWAGAGHIVHSALSRGGVGTDNLFGDEPWMKRLRENLVGVRRL*
Ga0134072_102139932	3300015357	Grasslands Soil	AGHIVHSALARGGVGTDNLFDEAPGMKRLRQYLVEVRRLDG*
Ga0134089_100046121	3300015358	Grasslands Soil	GAGRIVHSALARGGVGSDDLLGDTPGAKRLRDMLVAVRRLTVPRR*
Ga0134089_100064424	3300015358	Grasslands Soil	VSHVALWAGAGRIVHAALACGGVASEDLFSDDPRMAGLRERLVAVRRLKP*
Ga0132258_137513593	3300015371	Arabidopsis Rhizosphere	SHVALWAGAGRIVHSALSRGGVASDDLFGAEPRMARLRANLVGVRRCG*
Ga0134069_10065651	3300017654	Grasslands Soil	DGHRISHVALWSGAGRIVHSALSRGGVTSDDLFADTPTAKRLREYLVAVRRLGG
Ga0134069_12512771	3300017654	Grasslands Soil	HVALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRVAAPKR
Ga0134083_102032582	3300017659	Grasslands Soil	HAALSRGGVASDDLFGDTPGARRLRDFLVAVRRVNVRP
Ga0184610_11626232	3300017997	Groundwater Sediment	SHVAFWAGAGRIVHAALSRGGVGGDHLFGDEPRMKRMRENLVGVRRM
Ga0184634_105627581	3300018031	Groundwater Sediment	IVHSALSRGGVGGDDLFGPEPRMVRLRANLVGVRRCA
Ga0184637_100783841	3300018063	Groundwater Sediment	RRVSHVALWAGAGRVVHSTLPRGGVVSEDLFADSPRLKRLRDQLVGVRRVERR
Ga0184618_103118791	3300018071	Groundwater Sediment	RVSHVALWAGAGRIVHSTLPCGGVVRDDLFSPEPRMTGLRANLVGVRRCG
Ga0184640_102390871	3300018074	Groundwater Sediment	LLFFTERGRVSHVALWAGAGRIVHSALSRGGAGLDDLSGTEPRMVRLRANLVGVRRCV
Ga0184640_104875512	3300018074	Groundwater Sediment	LLFFTDGGRVSHVALWAGAGRIVHAALSRGGVGGDHLFGDEARMQRLRGNLVGVRRM
Ga0184627_100300935	3300018079	Groundwater Sediment	ERGRVSHVAFWAGAGRIVHSAVSRGGVGGDHLFGDEPRMVKLRANLVGVRRP
Ga0066655_109240122	3300018431	Grasslands Soil	VSHVALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR
Ga0066655_110405371	3300018431	Grasslands Soil	LWAGAGRIVHAALSRGGVGSDDLLGETPGAKRLRDMLVAVRRVAVPRR
Ga0066655_111153492	3300018431	Grasslands Soil	GRVSEVALWGGAGRIVHSALSRGGVVADDLLADTPAMRRLREYLVAVRRVEVANR
Ga0066655_112671842	3300018431	Grasslands Soil	FADGRKISHVALWAGAGRIVHSALARGGVASDDLLGDAPGAKRLRDMLVAVRRLNVRR
Ga0066667_100618093	3300018433	Grasslands Soil	VCLADGLRVSHVALGAGAGRVVHAVLACGGVASEDLFTDAPRMASLRERLVAVRRLKA
Ga0066667_110007531	3300018433	Grasslands Soil	IVHAALSRGGVASDDLLGETPGAKRLRDVLVAVRRMNVRR
Ga0066662_121997472	3300018468	Grasslands Soil	RIAHVALWAGAGHIVHSALARGGVGSDDLFADTPAAERLRGMLVAVRRPETSRS
Ga0066662_128782022	3300018468	Grasslands Soil	DGLRVTHVALWAGAGRVVHAVLACGGVASEDLFTDAPRMASLRERLVAVRRLKA
Ga0066669_100420421	3300018482	Grasslands Soil	ISHVALWAGAGHIVHSALSRGGVVADDLFADTPAMRRLREFLVAVRRVEEANR
Ga0066669_123243131	3300018482	Grasslands Soil	ISHVALWAGAGHIVHSALSRGGVVADDLFADTPAMRRLREYLVAVRRVETSG
Ga0187894_102308611	3300019360	Microbial Mat On Rocks	ESGRVGHVALWAGAGRIVHATLSRGGVVTEDLFGGGEVPRLKHLRDQLVGVRRMERR
Ga0193722_10033481	3300019877	Soil	GALGAGAGRIVHSALSRGGVGGDNLFGDEPRMVRLRGNLVGVRRM
Ga0193723_11510072	3300019879	Soil	LLFAEGGRVAHAALWAGAGHIVHATITRGGVGSDDLFGDSAFARRLRDGLVGVRRIT
Ga0210378_102246411	3300021073	Groundwater Sediment	GAGRIVHSALSRGGVGGDDLFGPDPRMVRLRANLVGVRRCV
Ga0179591_10634206	3300024347	Vadose Zone Soil	FTERGRVSHVAFWAGAGRIVHAALSRGGVGGDHLFGDEPRMVRLRENLVGVRRLGG
Ga0209640_109315612	3300025324	Soil	LFFAEDGRVGHVALWAGAGRIVHATLSRGGVVTEELYGGGEVPRLRRLRDQLVGVRRVER
Ga0209237_10461461	3300026297	Grasslands Soil	FADGLRVSHVALWAGAGRIVHAVLACGGVASEDLFTDAPRMASLRERLVAVRRLKA
Ga0209027_10037071	3300026300	Grasslands Soil	ALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR
Ga0209469_11364312	3300026307	Soil	FAEEGKVSHVALWLGAGRVAHSALSRGGVAVDALDAETALARRLRQQLVAVRRIV
Ga0209265_10444841	3300026308	Soil	AGAGRIVHAALSRGGVASDHLFGDTPGARRLRDFLVAVRRVNVRP
Ga0209239_12104561	3300026310	Grasslands Soil	RGRVSHVALWAGAGHIVHAALSRGGVASDHLFGDEPRMKRLRENLVGVRRPTA
Ga0209239_12922211	3300026310	Grasslands Soil	RISHVALWAGAGHIVHSALSRGGVVADDLFADTPAMRRLREYLVAVRRVEAANR
Ga0209761_12655441	3300026313	Grasslands Soil	WAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR
Ga0209268_10474583	3300026314	Soil	HVALWSGAGRIVHSALSRGGVTSDDLLADTPTAKRLRDFLVAVRRVERSRQ
Ga0209154_10300115	3300026317	Soil	QRISHVALWAGSGHVVHSALARGGVASDDLFADTPAARRLRGMLVAVRRPETSRA
Ga0209471_10122046	3300026318	Soil	VADGHGISHVALWAGAGRIVHSALSRGGVASDDLLGETAGAKRLRDSLVAVRRVNVRR
Ga0209470_13107881	3300026324	Soil	LLFFAERGRVSHVALWAGAGRIVHSALGRGGVGGDHLFGDEPRMVRLLAGLVGVRRL
Ga0209152_101713991	3300026325	Soil	SHVALWAGAGRIVHAVLACGGVASEDLFTDAPRMASLRERLVAVRRLKA
Ga0209801_11029831	3300026326	Soil	GRVWHVALWAGAGRIVHSALGRGGVGGDHLFGDEPRMVRLLAGLVGVRRL
Ga0209801_12517971	3300026326	Soil	AGRIVHAALSRGGVASDDLFADIPTAKRLRDFLLAVRRLVG
Ga0209266_12486731	3300026327	Soil	SHVALWAGAGRIVHSALARGGVGSDDLLGETPGARRLRDMLVAVRRLNVRR
Ga0209803_10887471	3300026332	Soil	LSRGGVGSDDLLGETPGAKRLRDFLVAVRRMNVRR
Ga0209377_11313093	3300026334	Soil	AALSRGGVASDHLFGDEPRMKRLRENLVGVRRFGG
Ga0209690_10103717	3300026524	Soil	CFADGRRISHVALWAGVGRIVHAALSRGGVASDDLFADLPTAKRLREYLVAVRRMAG
Ga0209059_12387541	3300026527	Soil	VALWAGAGRIVHSALSRGGVVADNLLGDTPPMRRLREFLVAVRRVDG
Ga0209807_10237071	3300026530	Soil	RRISHVALWAGAGHIVHSALSRGGVVADDLFADTPAMRRLREFLVAVRRVEAANR
Ga0209058_10894811	3300026536	Soil	LLFFAERGRVSHVALWAGMGRIVHAALSRGGVGGDHLFGDEPRMVRLRENLVGVRRPG
Ga0209161_100851254	3300026548	Soil	FFAERGRVSHVALWAGVGRIVHAALSRGGVGGDHLFGDEPRMKRLRESLVGVRRL
Ga0209161_101900121	3300026548	Soil	GRVSHVALWMGAGRVAHSALSRGGVAVDDLSAASPLARRLRDQLVAVRRIV
Ga0209474_100064011	3300026550	Soil	ISHVALWAGTGHIVHSALSRGGVGTENLFEDTPAAQRLRDLLVAVRRPETSRS
Ga0179587_108260641	3300026557	Vadose Zone Soil	WAGAGRIVHSALSRGGVGGDNLLGDEPRMVRLRENLVGVRRLGG
Ga0209178_10439701	3300027725	Agricultural Soil	DHVAIWAGAGRVVHSALSRGGVVMDDYFGDTPIGRRLRQEIVAVRRV
Ga0209073_103432092	3300027765	Agricultural Soil	HVALWAGAGRVVHSALARGGVGSDDLFADTPGAKRLREFLVAVRRIFLP
Ga0209283_104205262	3300027875	Vadose Zone Soil	IVHSVLGRGGVGGDHLFGDEPRMVRLRENLVGVRRM
Ga0209590_100353521	3300027882	Vadose Zone Soil	SHVALWAGAGRIVHAALACGGVASEDLFSDAPRMAALRQRLVAVRRLKG
Ga0209590_108673762	3300027882	Vadose Zone Soil	GAAGGIVHSALSRGGVASDALWDDAPAARRLREMLVAVRRVERLDG
Ga0247684_10263122	3300028138	Soil	LFFVERERISHVALWAGAGRIVHSTLSRGGVVSEDLFADQTRLTKLREQLVVVRRVEH
Ga0137415_112990951	3300028536	Vadose Zone Soil	RISHVALWAGAGRIVHSALARGGVASDDLLGDAPGAKRLRDMLVAVRRVAVPKR
Ga0307305_105627081	3300028807	Soil	FFTERGRVSHVALWSGGGAGRIVHAALSRGGVGGDDLFGGEPRIVTLRANLVGVRRCV
Ga0307302_103151011	3300028814	Soil	WAGAGRIVHSALSRGGVGIDHLLGDEPRMVKLRANLVGVRRCV
Ga0307312_106186041	3300028828	Soil	RGRVSHVALWAGAGRVVHSALSRGGVGVDDLFGDEPRMVKLRANLVGVRRCG
Ga0307278_102909041	3300028878	Soil	GRVSHVALWAGAGRIVHSALSRGGVGGDHLFGDEPRMVRLRESLVGVRRPA
Ga0307469_119994341	3300031720	Hardwood Forest Soil	AERERISHVALWAGAGRIVHSTLSRGGVVSEDLFADQARLTKLREQLVAVRRVER
Ga0326597_115649911	3300031965	Soil	TERGRVSHVALWAGAGRVVHSALSRGGVGIDDLFGSEPGMAKLRANLVGVRRCV
Ga0307471_1007037003	3300032180	Hardwood Forest Soil	RVSHVALWTGAGTIVHSALSRGGVASDHLFGDEPRMARMRENLVGVRRH
Ga0307471_1026522761	3300032180	Hardwood Forest Soil	WAGAGRIVHSALSRGGVGSDDLLGETPGAKRLRDLLVAVRRPNVRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F030223

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences