Metagenome / Metatranscriptome Family F030526

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F030526
Family Type	Metagenome / Metatranscriptome
Number of Sequences	185
Average Sequence Length	45 residues
Representative Sequence	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALA
Number of Associated Samples	105
Number of Associated Scaffolds	185

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.84 %
% of genes near scaffold ends (potentially truncated)	96.76 %
% of genes from short scaffolds (< 2000 bps)	90.27 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.541 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.865 % of family members)
Environment Ontology (ENVO)	Unclassified (44.324 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.027 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 185 Family Scaffolds
PF04392	ABC_sub_bind	2.16
PF00132	Hexapep	1.62
PF07045	DUF1330	1.08
PF00083	Sugar_tr	1.08
PF01068	DNA_ligase_A_M	1.08
PF06411	HdeA	1.08
PF13586	DDE_Tnp_1_2	0.54
PF07883	Cupin_2	0.54
PF13340	DUF4096	0.54
PF00196	GerE	0.54
PF06577	EipA	0.54
PF13458	Peripla_BP_6	0.54
PF08281	Sigma70_r4_2	0.54
PF00534	Glycos_transf_1	0.54
PF01425	Amidase	0.54
PF01042	Ribonuc_L-PSP	0.54
PF13579	Glyco_trans_4_4	0.54

COG ID	Name	Functional Category	% Frequency in 185 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.16
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.08
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.08
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.08
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.54
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
All Organisms	root	All Organisms	39.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
cellular organisms	root	All Organisms → cellular organisms	39.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.14 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.54 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.54 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.54 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.54 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.14 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.16 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.62 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.54 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.54 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.54 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.54 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.54 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.54 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.54 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.54 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.54 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.54 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.62 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.54 %
Methylobacterium sp. WL7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL7	0.54 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.54 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.54 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.54 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.54 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.62 %
Streptomyces sp. WM6378	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WM6378	0.54 %
Methylobacterium sp. WL7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL7	0.54 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.54 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.54 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.54 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.54 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.54 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10024816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1634	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10097815	Not Available	725	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1045483	Not Available	574	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1099989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10056410	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10061933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10087843	Not Available	661	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10112290	Not Available	572	Open in IMG/M
3300000955\|JGI1027J12803_101307458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300002917\|JGI25616J43925_10068850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1499	Open in IMG/M
3300004267\|Ga0066396_10029188	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005332\|Ga0066388_100401809	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300005332\|Ga0066388_101686741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1120	Open in IMG/M
3300005332\|Ga0066388_101757478	Not Available	1100	Open in IMG/M
3300005332\|Ga0066388_105079257	Not Available	668	Open in IMG/M
3300005332\|Ga0066388_107946292	Not Available	531	Open in IMG/M
3300005332\|Ga0066388_108116428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300005363\|Ga0008090_10015312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300005437\|Ga0070710_10000639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16674	Open in IMG/M
3300005437\|Ga0070710_11254998	Not Available	549	Open in IMG/M
3300005439\|Ga0070711_100682386	Not Available	864	Open in IMG/M
3300005467\|Ga0070706_101700510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300005552\|Ga0066701_10089581	Not Available	1779	Open in IMG/M
3300005713\|Ga0066905_101621074	Not Available	592	Open in IMG/M
3300005718\|Ga0068866_11124615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	564	Open in IMG/M
3300005764\|Ga0066903_100529018	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300005764\|Ga0066903_101225846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1395	Open in IMG/M
3300005764\|Ga0066903_101529917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1261	Open in IMG/M
3300005764\|Ga0066903_101785020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1174	Open in IMG/M
3300005764\|Ga0066903_102582434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	984	Open in IMG/M
3300005764\|Ga0066903_102598451	Not Available	981	Open in IMG/M
3300005764\|Ga0066903_102774715	Not Available	950	Open in IMG/M
3300005764\|Ga0066903_103223396	Not Available	882	Open in IMG/M
3300005764\|Ga0066903_103990249	Not Available	791	Open in IMG/M
3300005764\|Ga0066903_104843691	Not Available	715	Open in IMG/M
3300005764\|Ga0066903_104960593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300005764\|Ga0066903_105612977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WM6378	660	Open in IMG/M
3300005764\|Ga0066903_105627553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	659	Open in IMG/M
3300005764\|Ga0066903_106396925	Not Available	614	Open in IMG/M
3300005764\|Ga0066903_107229996	Not Available	574	Open in IMG/M
3300005764\|Ga0066903_107343291	Not Available	569	Open in IMG/M
3300005764\|Ga0066903_108553062	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_108664285	Not Available	517	Open in IMG/M
3300005764\|Ga0066903_108747730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300006032\|Ga0066696_10594428	Not Available	719	Open in IMG/M
3300006038\|Ga0075365_10624267	Not Available	762	Open in IMG/M
3300006046\|Ga0066652_101369139	Not Available	664	Open in IMG/M
3300006173\|Ga0070716_101388715	Not Available	570	Open in IMG/M
3300006175\|Ga0070712_100489417	Not Available	1029	Open in IMG/M
3300006871\|Ga0075434_100817924	Not Available	947	Open in IMG/M
3300006953\|Ga0074063_13131847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	703	Open in IMG/M
3300006954\|Ga0079219_12423731	Not Available	509	Open in IMG/M
3300009137\|Ga0066709_103678177	Not Available	556	Open in IMG/M
3300009792\|Ga0126374_10672244	Not Available	775	Open in IMG/M
3300010046\|Ga0126384_10715207	Not Available	889	Open in IMG/M
3300010046\|Ga0126384_11209779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300010046\|Ga0126384_11955426	Not Available	560	Open in IMG/M
3300010047\|Ga0126382_11024957	Not Available	725	Open in IMG/M
3300010047\|Ga0126382_12176831	Not Available	533	Open in IMG/M
3300010048\|Ga0126373_12377621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300010048\|Ga0126373_12746755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300010358\|Ga0126370_10211125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1475	Open in IMG/M
3300010358\|Ga0126370_10748454	Not Available	865	Open in IMG/M
3300010358\|Ga0126370_10938598	Not Available	784	Open in IMG/M
3300010358\|Ga0126370_11191388	Not Available	708	Open in IMG/M
3300010358\|Ga0126370_11704370	Not Available	607	Open in IMG/M
3300010360\|Ga0126372_12579849	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300010361\|Ga0126378_10178534	All Organisms → cellular organisms → Bacteria → Proteobacteria	2187	Open in IMG/M
3300010361\|Ga0126378_12664415	Not Available	571	Open in IMG/M
3300010366\|Ga0126379_10873734	Not Available	1001	Open in IMG/M
3300010366\|Ga0126379_10923099	Not Available	976	Open in IMG/M
3300010366\|Ga0126379_11654619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	745	Open in IMG/M
3300010366\|Ga0126379_12123552	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300010366\|Ga0126379_12419120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300010376\|Ga0126381_100698181	Not Available	1451	Open in IMG/M
3300010376\|Ga0126381_103213248	Not Available	646	Open in IMG/M
3300010376\|Ga0126381_103278097	Not Available	639	Open in IMG/M
3300010376\|Ga0126381_103810435	Not Available	589	Open in IMG/M
3300010376\|Ga0126381_104395812	Not Available	545	Open in IMG/M
3300010376\|Ga0126381_104658152	Not Available	528	Open in IMG/M
3300010398\|Ga0126383_10704752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1088	Open in IMG/M
3300010398\|Ga0126383_10930097	Not Available	956	Open in IMG/M
3300010398\|Ga0126383_11317465	Not Available	812	Open in IMG/M
3300010398\|Ga0126383_12045702	Not Available	660	Open in IMG/M
3300010868\|Ga0124844_1312242	Not Available	524	Open in IMG/M
3300010868\|Ga0124844_1313524	Not Available	522	Open in IMG/M
3300012211\|Ga0137377_11398099	Not Available	628	Open in IMG/M
3300012582\|Ga0137358_10789166	Not Available	632	Open in IMG/M
3300012938\|Ga0162651_100053300	Not Available	641	Open in IMG/M
3300012948\|Ga0126375_10340329	Not Available	1060	Open in IMG/M
3300012948\|Ga0126375_12049006	Not Available	507	Open in IMG/M
3300012961\|Ga0164302_10720829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	742	Open in IMG/M
3300012971\|Ga0126369_10149225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2196	Open in IMG/M
3300012971\|Ga0126369_11103484	Not Available	882	Open in IMG/M
3300012971\|Ga0126369_12213868	Not Available	637	Open in IMG/M
3300012989\|Ga0164305_12175136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300014969\|Ga0157376_11955189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300015374\|Ga0132255_104866639	Not Available	569	Open in IMG/M
3300016270\|Ga0182036_10676379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300016270\|Ga0182036_10928072	Not Available	715	Open in IMG/M
3300016270\|Ga0182036_11183669	Not Available	635	Open in IMG/M
3300016270\|Ga0182036_11817053	Not Available	516	Open in IMG/M
3300016294\|Ga0182041_10146066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1817	Open in IMG/M
3300016319\|Ga0182033_11348206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300016341\|Ga0182035_10019331	Not Available	4196	Open in IMG/M
3300016341\|Ga0182035_10800298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL7	827	Open in IMG/M
3300016341\|Ga0182035_11194471	Not Available	679	Open in IMG/M
3300016357\|Ga0182032_10987214	Not Available	719	Open in IMG/M
3300016357\|Ga0182032_11740985	Not Available	544	Open in IMG/M
3300016371\|Ga0182034_10880037	Not Available	770	Open in IMG/M
3300016404\|Ga0182037_11458307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300016422\|Ga0182039_10780652	Not Available	847	Open in IMG/M
3300016422\|Ga0182039_10968905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300020581\|Ga0210399_11460808	Not Available	532	Open in IMG/M
3300021178\|Ga0210408_10615088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300021560\|Ga0126371_10174943	Not Available	2226	Open in IMG/M
3300021560\|Ga0126371_12021641	Not Available	693	Open in IMG/M
3300021560\|Ga0126371_12205502	Not Available	665	Open in IMG/M
3300021560\|Ga0126371_12363337	Not Available	643	Open in IMG/M
3300021560\|Ga0126371_12485515	Not Available	627	Open in IMG/M
3300021560\|Ga0126371_12664750	Not Available	606	Open in IMG/M
3300024347\|Ga0179591_1134206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2251	Open in IMG/M
3300025898\|Ga0207692_10224359	Not Available	1115	Open in IMG/M
3300025939\|Ga0207665_10802595	Not Available	744	Open in IMG/M
3300027654\|Ga0209799_1153748	Not Available	524	Open in IMG/M
3300027775\|Ga0209177_10363187	Not Available	570	Open in IMG/M
3300031545\|Ga0318541_10303083	Not Available	890	Open in IMG/M
3300031546\|Ga0318538_10735736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031561\|Ga0318528_10187504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1105	Open in IMG/M
3300031561\|Ga0318528_10471844	Not Available	674	Open in IMG/M
3300031573\|Ga0310915_10017807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4263	Open in IMG/M
3300031573\|Ga0310915_10371770	Not Available	1014	Open in IMG/M
3300031573\|Ga0310915_10634836	Not Available	756	Open in IMG/M
3300031680\|Ga0318574_10112406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1521	Open in IMG/M
3300031681\|Ga0318572_10860630	Not Available	539	Open in IMG/M
3300031713\|Ga0318496_10289965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300031719\|Ga0306917_11446333	Not Available	529	Open in IMG/M
3300031744\|Ga0306918_11105331	Not Available	614	Open in IMG/M
3300031747\|Ga0318502_10685164	Not Available	619	Open in IMG/M
3300031768\|Ga0318509_10678571	Not Available	572	Open in IMG/M
3300031771\|Ga0318546_10069756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2240	Open in IMG/M
3300031771\|Ga0318546_10701443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300031771\|Ga0318546_10816203	Not Available	656	Open in IMG/M
3300031780\|Ga0318508_1135129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300031793\|Ga0318548_10373355	Not Available	700	Open in IMG/M
3300031805\|Ga0318497_10347137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300031819\|Ga0318568_10640922	Not Available	661	Open in IMG/M
3300031831\|Ga0318564_10426945	Not Available	579	Open in IMG/M
3300031833\|Ga0310917_10301135	Not Available	1084	Open in IMG/M
3300031846\|Ga0318512_10337401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300031879\|Ga0306919_10454884	Not Available	985	Open in IMG/M
3300031879\|Ga0306919_11446707	Not Available	518	Open in IMG/M
3300031890\|Ga0306925_10671324	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300031896\|Ga0318551_10146063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1288	Open in IMG/M
3300031897\|Ga0318520_10952499	Not Available	541	Open in IMG/M
3300031910\|Ga0306923_10109456	Not Available	3125	Open in IMG/M
3300031912\|Ga0306921_10246597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2093	Open in IMG/M
3300031941\|Ga0310912_10665002	Not Available	808	Open in IMG/M
3300031941\|Ga0310912_10980577	Not Available	648	Open in IMG/M
3300031942\|Ga0310916_11187065	Not Available	631	Open in IMG/M
3300031947\|Ga0310909_10055112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3069	Open in IMG/M
3300031947\|Ga0310909_10195776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1678	Open in IMG/M
3300031947\|Ga0310909_10862338	Not Available	745	Open in IMG/M
3300031954\|Ga0306926_12002481	Not Available	651	Open in IMG/M
3300031981\|Ga0318531_10012846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3193	Open in IMG/M
3300032001\|Ga0306922_10597394	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300032001\|Ga0306922_11354823	Not Available	717	Open in IMG/M
3300032025\|Ga0318507_10254475	Not Available	762	Open in IMG/M
3300032035\|Ga0310911_10028369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2769	Open in IMG/M
3300032035\|Ga0310911_10232784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300032039\|Ga0318559_10099966	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300032042\|Ga0318545_10292091	Not Available	586	Open in IMG/M
3300032052\|Ga0318506_10428894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	586	Open in IMG/M
3300032054\|Ga0318570_10126491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1132	Open in IMG/M
3300032059\|Ga0318533_10067073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2423	Open in IMG/M
3300032064\|Ga0318510_10241658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300032066\|Ga0318514_10415719	Not Available	714	Open in IMG/M
3300032076\|Ga0306924_10500636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1384	Open in IMG/M
3300032076\|Ga0306924_11723802	Not Available	656	Open in IMG/M
3300032090\|Ga0318518_10651743	Not Available	536	Open in IMG/M
3300032090\|Ga0318518_10723186	Not Available	506	Open in IMG/M
3300032091\|Ga0318577_10400702	Not Available	655	Open in IMG/M
3300032261\|Ga0306920_100186787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3092	Open in IMG/M
3300032261\|Ga0306920_100253852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2623	Open in IMG/M
3300032261\|Ga0306920_104466584	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.30%
Host-Associated	Host-Associated	2.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.30%
Plants	Host-Associated → Plants	2.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.08%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.54%
Roots	Host-Associated → Plants → Roots	0.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.22%
Loam	Environmental → Terrestrial → Soil → Loam	20.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.08%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.54%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.54%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.08%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.54%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.54%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.54%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.54%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.54%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.54%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100248166	3300000597	Forest Soil	MRGEIVNGYQRLNSEDQKTFRRWLWANTVVGAILLAGLIAL
AF_2010_repII_A1DRAFT_100978151	3300000597	Forest Soil	MRGEFINEYQKLNSEDQKAFRRWLWANTVVGAILLAGLIALALK
AP72_2010_repI_A10DRAFT_10454831	3300000651	Forest Soil	MRGEIIYEYQKLNSEDKKTVRRFLWVNAAIATILLAGLIALAVNAPGDKSETTDQH
AF_2010_repII_A100DRAFT_10999892	3300000655	Forest Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIAL
AF_2010_repII_A001DRAFT_100564101	3300000793	Forest Soil	MRGEIITEYQKLNSEDQKTFRRWLWANTVVGAILLA
AF_2010_repII_A001DRAFT_100619333	3300000793	Forest Soil	MRGFNEYQKLNSEDQKAFRRYLWANAVVGAILLAGLIALAVNVPGDKSETTDQH
AF_2010_repII_A001DRAFT_100878432	3300000793	Forest Soil	MRGEIIYQYQKLNSEDQKVFQRWLWANTVVGAILLAGLISLAVNVPGDKSETTG
AF_2010_repII_A001DRAFT_101122901	3300000793	Forest Soil	MRGEIVNEYQRLNSEDQKTFRRWLWANTVVGAILLAGL
JGI1027J12803_1013074581	3300000955	Soil	MRGEIINEIQKLNSEDQKTFRRWLWVNAVVGAILLAGL
JGI25616J43925_100688501	3300002917	Grasslands Soil	MRGEMINEYQKLNSEDQKAFRRWLWANAVVGGILLTGLITLALHQGDE
Ga0066396_100291882	3300004267	Tropical Forest Soil	MRGEFINEYQKLNSEEQKTFRRWLWANTVVGAILLAGLIALAL
Ga0066388_1004018092	3300005332	Tropical Forest Soil	MRGEIIYEYHKLSREDQKTVRRWLWANTVVGAILLAGLIVLAVNVPGDKSPELASTLSSR
Ga0066388_1016867415	3300005332	Tropical Forest Soil	MRGEMINRYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALAVNVPGGKSETTD
Ga0066388_1017574783	3300005332	Tropical Forest Soil	MRGEFINEYQKLNSEDRKAFRRWLWANTVVGAILLAGLIALALKLPGDQSGATAQH
Ga0066388_1050792571	3300005332	Tropical Forest Soil	MRGEIIYEYHKLSPEDQKTLRRWLWANTVVGAILLAGLIALAVNVPGDKSQNTDQH
Ga0066388_1079462922	3300005332	Tropical Forest Soil	MILELEGSMRGEMINEYQKLNSKDQKAFRRWLWANAVVGAIL
Ga0066388_1081164281	3300005332	Tropical Forest Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASKF
Ga0008090_100153122	3300005363	Tropical Rainforest Soil	MRGEIINEYQKLNSEDQKTFSRWLWANTVVGAILLAGLIALASKSPGDKSG
Ga0070710_100006391	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRGEIINEYRKLNSEDQKAFRRFLWVNAAIGAILLAGLIALAVNVPGDKSEATAQ
Ga0070710_112549982	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRGEIIYEYHKLSPEDQKTLRRWLWANTVVGAILLAGLIVLAVNVPGDKSK
Ga0070711_1006823862	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRGEIVNEYRKLNSEDQKAFRRFLWTNAVVGAILLAGLIV
Ga0070706_1017005101	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRGKFINEYQKLNSEDQKAFRRWLWVNAVVGAILLTGLIALAVHQGDES
Ga0066701_100895811	3300005552	Soil	MRGEIINEYQKLNSEDQKAFRRWLWVNAVGGVILLTGLI
Ga0066905_1016210741	3300005713	Tropical Forest Soil	MHGFYEYRRLSSEDQKAFRRWLWANAVVGAILLVGAIALAIKVP
Ga0068866_111246152	3300005718	Miscanthus Rhizosphere	MRGGITYEYQKLNSEDQKTFRRWLCVNTVVGAILLAGVIVLAVKLPGDQS
Ga0066903_1005290181	3300005764	Tropical Forest Soil	VENSSMNEYQKLNSEDQKTFRRWLWTNAVVGAILLTGLIALALKPPGGQSGATT
Ga0066903_1012258461	3300005764	Tropical Forest Soil	MRGEFINEYQKLNSEDQKTFRRWLWTNAVVGAILLTGLIALALKPPGGQSGATT
Ga0066903_1015299173	3300005764	Tropical Forest Soil	MSGEHIFEYQKLNSEDQKTYRRWLWANAVVVAILLTGLVAV
Ga0066903_1017850202	3300005764	Tropical Forest Soil	MRGEIIYEYHKLSPEDQKTLRRWLWANTVVGAILLAGLIALA
Ga0066903_1025824341	3300005764	Tropical Forest Soil	MRGEIFNQYEKLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLPGDQS
Ga0066903_1025984511	3300005764	Tropical Forest Soil	MRGEMINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALALKVPGDQSGATAQHA
Ga0066903_1027747151	3300005764	Tropical Forest Soil	MRGEIINEYQRLNSEDQKAFRRWLWANAVVGAILLTGLIALASF
Ga0066903_1032233962	3300005764	Tropical Forest Soil	MRGEFINEYQKLNSEDQKVFRRWLWVNAVIGAILLAGLIALAVNVP
Ga0066903_1039902491	3300005764	Tropical Forest Soil	MRGEMINRYQKLNSEDQKTFRRWLWANTVVGAILLA
Ga0066903_1048436912	3300005764	Tropical Forest Soil	MRGEILNQYEKLNSEDQKVFRRWLWVNAAIATILLAGLIALAVNVPGDK
Ga0066903_1049605932	3300005764	Tropical Forest Soil	MRGKIFNQYEKLDSEDQKVYRRWLWVNAVIGAILLAGLIALAVNVPGDKSET
Ga0066903_1056129772	3300005764	Tropical Forest Soil	MRGEHIFEYQKLNSEDQKTYRRWLWANAVVVAILLTGLVAV
Ga0066903_1056275531	3300005764	Tropical Forest Soil	MRGEIIYEYHKLSREDQKTVRRWLWANTVVGAILLAGLIVLAVNVPGDK
Ga0066903_1063969252	3300005764	Tropical Forest Soil	MRGEIINEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALASKSPGDKSGATAQ
Ga0066903_1072299961	3300005764	Tropical Forest Soil	MRGEMINEYQKLNSEDQKTFRRWLWANTVVGAILLTGLIALASNFSGAESA
Ga0066903_1073432911	3300005764	Tropical Forest Soil	MSGEMINEYQRLNSEDQKAFRRWLWANAVVGAILLAGLIAL
Ga0066903_1085530622	3300005764	Tropical Forest Soil	MRGEIINEYQKLNSEDQKTFSRWLWANTVVGAILLAGL
Ga0066903_1086642851	3300005764	Tropical Forest Soil	MRGEFINEYQKLNSEDQKVFRRWLWVNAAIATILLAGLIALAVNV
Ga0066903_1087477302	3300005764	Tropical Forest Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALA
Ga0066696_105944282	3300006032	Soil	MRREIIYQYQKLNSEDQKVFQRWLWINTVAGAILLAGLIALAVNVPGDKSETTDQHA
Ga0075365_106242671	3300006038	Populus Endosphere	MRGEMINRYKMLNSEDQKTFRRWLWANTVVGAILLAGLIALAVNVPGDKSETT
Ga0066652_1013691391	3300006046	Soil	MRGEFINEYERLNSEDQKTFRRWLWANTLVGAILLTGLI
Ga0070716_1013887151	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRGEIINEYQKLNSEDQKAFRRFLWTNAVVGAILLAGLIVLAVNVPGDK
Ga0070712_1004894171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRGELINEYRKFNSEDQKAFRRFLWTNAVVGAILLAGLIVLAVN
Ga0075434_1008179241	3300006871	Populus Rhizosphere	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALALQGD
Ga0074063_131318471	3300006953	Soil	MRGEFINEYQKLNSKDQKTFRRWLWANAVVGAILLAGLIAFVL
Ga0079219_124237312	3300006954	Agricultural Soil	MRGEMINRYKMLNSEDQKTFRRWLWANTVVGAILL
Ga0066709_1036781771	3300009137	Grasslands Soil	MRGEIINEYQKLNSEDQKAFRRWLWVNAVGGVILLTGLIVPARHQGDES
Ga0126374_106722441	3300009792	Tropical Forest Soil	MRGEIINEYQKLNSEDQRTFSRWLWANTVVGAILLAGLIALASKSPGDKSG
Ga0126384_107152071	3300010046	Tropical Forest Soil	MRGEIINEYQKLNSEDQKAFRRWLWANAVVGVWRS*
Ga0126384_112097791	3300010046	Tropical Forest Soil	MEGSMRGEIINEYQRLNSEDQKAFRRWLWANAVVGAILLTGLIA
Ga0126384_119554262	3300010046	Tropical Forest Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLA
Ga0126382_110249571	3300010047	Tropical Forest Soil	MRGEMINEYLRLNSENQKTFRRWLWANAVVGAILLVGLIALAV
Ga0126382_121768311	3300010047	Tropical Forest Soil	MRGEIINEYQRLNSEDQKAFRRWLWANAVVGAILLTGLIAL
Ga0126373_123776212	3300010048	Tropical Forest Soil	MREEFINEYQRLNSEDQKTFRRWLWANTVVGAILLAGL
Ga0126373_127467551	3300010048	Tropical Forest Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASKFPGDESGA
Ga0126370_102111253	3300010358	Tropical Forest Soil	MRGEIIYEYQKLNSEDQKAFRRFLWVNTVVGAILLAGLIALAVNAPGDKS
Ga0126370_107484541	3300010358	Tropical Forest Soil	MRGEFIEYQKLNSEDQKTFRRWLWANTVVGAILLAGLTALALKLPGDQSGATAQHAT
Ga0126370_109385981	3300010358	Tropical Forest Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALALK
Ga0126370_111913881	3300010358	Tropical Forest Soil	MRGEFINEYQKLNSEDQKTFRRWLWTNAVVGAILLTGLIALALKPPG
Ga0126370_117043702	3300010358	Tropical Forest Soil	AMRGEMINRYQKLNSEDQKTFRRWLWANTVVGAILLAGLIVLAVNVPGDKSPELASTLSSR*
Ga0126372_125798491	3300010360	Tropical Forest Soil	MRGEVIYEYQKLNAEDQKAFRRFLWANTVVGAILLTGLIALAL
Ga0126378_101785341	3300010361	Tropical Forest Soil	MRGVSINEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLPGGQS
Ga0126378_126644152	3300010361	Tropical Forest Soil	MRGEFIHEYQRLNLEDQKAFRRWLWANAVVGAILLTGLIALALKLPGDQSG
Ga0126379_108737341	3300010366	Tropical Forest Soil	MRGEIVNEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALA
Ga0126379_109230992	3300010366	Tropical Forest Soil	MRGEIINEYQRLNSEDQKAFRRWLWANAVVGAVLLTGLIALASNFPGDE*
Ga0126379_116546192	3300010366	Tropical Forest Soil	MRGEIINEYQKLNLEDRKAFRAWLWVNAVVGAILLR
Ga0126379_121235521	3300010366	Tropical Forest Soil	MRGEIIYEYQKLNSEDQKAFRHWLWVNTVVGAILLAGL
Ga0126379_124191201	3300010366	Tropical Forest Soil	MRGEIIYEYHRLNSKDQKVVRRWLWANTVVGAILLAGLIVLAVNVPGDKSPELASTLSSR
Ga0126381_1006981811	3300010376	Tropical Forest Soil	MRGEMINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIA
Ga0126381_1032132481	3300010376	Tropical Forest Soil	MRGEIIYEYQKLNSEDKKTVRRFLWVNAAIATILLAGLIALAVNVPDDKSETTD
Ga0126381_1032780972	3300010376	Tropical Forest Soil	MRGEFINEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALALKL
Ga0126381_1038104351	3300010376	Tropical Forest Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALAS
Ga0126381_1043958121	3300010376	Tropical Forest Soil	MEGSMRGEFSNEYQKLNSEDQKAFHRWLWANAVVGAILLAGLIALA
Ga0126381_1046581521	3300010376	Tropical Forest Soil	MRGEIIYEYQKLNSEDKKTVRRFLWVNAAIATILLAGLIALAVNAPGDKS
Ga0126383_107047524	3300010398	Tropical Forest Soil	MRGELINVYQRLNSEDQKAFRRWLWANAVVGAILL
Ga0126383_109300972	3300010398	Tropical Forest Soil	MRGEFINEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLPGDQSGATA
Ga0126383_113174652	3300010398	Tropical Forest Soil	MRGEFINEYEKLNSEDQKAFRRWLWANAVVGAILLTGLIALASKNP
Ga0126383_120457021	3300010398	Tropical Forest Soil	MRREIINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALASKS
Ga0124844_13122421	3300010868	Tropical Forest Soil	LLGGGFDARGEIINEYQKLDSADQKAFRRWLWANAVVGAILL
Ga0124844_13135241	3300010868	Tropical Forest Soil	MRGEIINEYQKLDSADQKAFRRWLWANAVVGAILL
Ga0137377_113980991	3300012211	Vadose Zone Soil	MRGEMINRYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALAVNVPG
Ga0137358_107891661	3300012582	Vadose Zone Soil	MRGEIINEYQKLNSEDQKAFQRFLWANAVVGVILLAGLIVLASKFPSDE
Ga0162651_1000533001	3300012938	Soil	VRELYQKLNAEDQKTFRRWLWANTVVGAILLAGLIALAVNVPGDKSEATAQHATI
Ga0126375_103403291	3300012948	Tropical Forest Soil	MRGKFINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLPGDQSGATAQHA
Ga0126375_120490062	3300012948	Tropical Forest Soil	MRGEIIHEYEKLNSGDQKVFRRWLLANTVVGAILLTGLIALVLASKPGDES
Ga0164302_107208292	3300012961	Soil	MRGEIINEYQKLNSKDQKAFRRWLWANTVVGAILLAGLITLASKLP
Ga0126369_101492253	3300012971	Tropical Forest Soil	MRGVSINEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALALKL
Ga0126369_111034842	3300012971	Tropical Forest Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLPGDQ
Ga0126369_122138682	3300012971	Tropical Forest Soil	MRGEIINEYEKLNSEDQKAFRRWLWANAVVGAILLTGLIALAS
Ga0164305_121751361	3300012989	Soil	MRGEIINEIQKLNSEDQKTFRRWIWVKAVVGAILVIGLVELAGDRG
Ga0157376_119551892	3300014969	Miscanthus Rhizosphere	MGGGIGNEYQKLNPEDQKTFRRWLWANAIVVVLLLAGL
Ga0132255_1048666391	3300015374	Arabidopsis Rhizosphere	MRGEFINEFQKLNSEDQKAFRRWLWANAVVGAILLTGLIALAVH
Ga0182036_106763793	3300016270	Soil	MRGEIINEYERLNSKDQIAFRRWLWANTVVGAILLTGLIALAVKFSGAES
Ga0182036_109280721	3300016270	Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGL
Ga0182036_111836691	3300016270	Soil	MRGEIINEYEKLNSEDQKAFRRWLWANAVVGAILLT
Ga0182036_118170532	3300016270	Soil	MPGEFIYEYQKLNSEDQKAFRRWFWANCVVGTILLAGLI
Ga0182041_101460661	3300016294	Soil	MRGESINEYQKLNSEDQTTSRRWLWANTVVGAILLAGLIALALKLPGDQSGATA
Ga0182033_113482062	3300016319	Soil	MRGEMINEYQKLNSEDQKAFRRWLWANAVVGAILL
Ga0182035_100193311	3300016341	Soil	MRGEIINEYQKLNAENQKAFRRWLWVNAVVGAILLTGLIAVALQGDESGA
Ga0182035_108002981	3300016341	Soil	MRGEIINEYQKLNSEDQKAFRRWLWVNAVVGAILLTGLIAL
Ga0182035_111944711	3300016341	Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASKFLG
Ga0182032_109872141	3300016357	Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILL
Ga0182032_117409851	3300016357	Soil	MRGVSINEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALASKSPGDKSG
Ga0182034_108800371	3300016371	Soil	MRGETIGEYQKLNSEDQKTFRRWLWANAVVGAILLTGLIAL
Ga0182037_114583071	3300016404	Soil	MRGEMINEYQKLNSEDQKAFRRWLWANAVVGAILLT
Ga0182039_107806521	3300016422	Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLPGDQSGATAQHAM
Ga0182039_109689053	3300016422	Soil	MRGEITNEYQKLNPEDQKAFSRWLWVNAVVGAILLAGLITLATRADATET
Ga0210399_114608082	3300020581	Soil	MRGEMINEYQKLNSEDQKTYRRWLWINAVVQAILLAGLIVLVSKFPGDES
Ga0210408_106150881	3300021178	Soil	MRGEIINEYQKLNSQDQKAFRRWLWANAVVGAILLT
Ga0126371_101749434	3300021560	Tropical Forest Soil	MRGEFIHEYQRLNLEDQKAFRRWLWANAVVGAILLT
Ga0126371_120216411	3300021560	Tropical Forest Soil	MRGEFINEYQKLNSEDQKVFRRWLWVNTVVGAILLAGLIALAVNVPGDKSE
Ga0126371_122055021	3300021560	Tropical Forest Soil	MRREIINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALASKSPGDKS
Ga0126371_123633371	3300021560	Tropical Forest Soil	MRGQIINEYRTLNSEDQKTFRRWLWANTVVGAILLSGLIVLASKSPGDKSEATAQ
Ga0126371_124855152	3300021560	Tropical Forest Soil	MRGEIIYEYQKLNSKDQKVFQRWLWVNTVVGAILLAGLIAL
Ga0126371_126647501	3300021560	Tropical Forest Soil	MRGEIVNEYQRLNSEDQKTFRRWLWANTVVGAILLAGLIALASKSP
Ga0179591_11342061	3300024347	Vadose Zone Soil	MRGEFINEYQKLNSEDQKTFRRWLWVNAVVGAILLAGLIALA
Ga0207692_102243592	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRGEIINEYRKLNSEDQKAFRRFLWVNAAIGAILLAGLIALAVNVPGDK
Ga0207665_108025952	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRGEIIYEYHKLSPEDQKTVRRWLLANTVVGAILLAGLIVLAVNVPGDKSKNT
Ga0209799_11537481	3300027654	Tropical Forest Soil	MRGEIINEYQKLNAEDQKAFRRWLWANAVVGAILLTGLI
Ga0209177_103631871	3300027775	Agricultural Soil	MRGEMINRYKMLNSEDQKTFRRWLWANTVVGAILLAGLIALAVNVPGDKSETTDQH
Ga0318541_103030831	3300031545	Soil	MRGEFIEYQKLNSEDQKTFRRWLWANTVVGAILLTGLI
Ga0318538_107357361	3300031546	Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTG
Ga0318528_101875041	3300031561	Soil	MRGEMINEYQKLNSEDQKTFRRWLWANTVVGAILLSGLIVL
Ga0318528_104718442	3300031561	Soil	LSGGGSMRGEIINEYQKLNLEDRKAFRAWLWVNAVVGAIC
Ga0310915_100178071	3300031573	Soil	MRGEFIEYQKLNSEDQKTFRRWLWANTVVGAILLT
Ga0310915_103717701	3300031573	Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLTGLIALASFPGKES
Ga0310915_106348362	3300031573	Soil	MRGETIGEYQKLNSEDQKTFRRWLWANAVVGAILLTGLIALALQGDGSGATA
Ga0318574_101124061	3300031680	Soil	MRGEMINEYQKLNSEDQKTFRRWLWANTVVGAILLSGLIVLASKSPGDK
Ga0318572_108606301	3300031681	Soil	MRGEIINEYQKLNAENQKAFRRWLWANAVVGAILLTGL
Ga0318496_102899652	3300031713	Soil	MRGEIINEYEKLNSGDQKAFRRWLWANAVVGAILLTGLIALASNFSGAESA
Ga0306917_114463331	3300031719	Soil	MRGEIINEYQKLNSKDQKAFRRWLWANTVVGAILL
Ga0306918_111053311	3300031744	Soil	MRGEIIYEYRKLNSEDHKAFRRWLWANTIVGAILVVGLIVLTS
Ga0318502_106851642	3300031747	Soil	MRGEIINEYQRLNSEDQKAFRRWLWANAVVGAILL
Ga0318509_106785711	3300031768	Soil	MRGEFISEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASSPVGESG
Ga0318546_100697561	3300031771	Soil	MRGEIINEYQKLNSKDQKAFRRWLWANTVVGAILLTGLI
Ga0318546_107014432	3300031771	Soil	MRGESINEYQKLNSEDQTTSRRWLWANTVVGAILLAGLIALALKLPGDQSGATAQHAM
Ga0318546_108162032	3300031771	Soil	MRGEMSNEYLRLDSENQKTFRRWLWANAVVLAILLTGLIVLVSKFPG
Ga0318508_11351292	3300031780	Soil	MRGEFINEYQKLNSKDQKTFRRWLWANTVVGAILLTGLIAPASFP
Ga0318548_103733552	3300031793	Soil	MRGEIINEYQKLNSEDQKAFRRWLWANAVVGVWRS
Ga0318497_103471371	3300031805	Soil	MRGEIIYEYRRLNWEDQKAFRRFLWANTVVGAILLTELIV
Ga0318568_106409221	3300031819	Soil	MRGEIINEYQRLNSEDQKAFRHWLWANAVVGAVLLTGLI
Ga0318564_104269451	3300031831	Soil	MRGEFIEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLP
Ga0310917_103011353	3300031833	Soil	MRGEFISEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASSP
Ga0318512_103374013	3300031846	Soil	MRGEISNEYQKLNSEDQKAFRRWLWANAVVGAILMT
Ga0306919_104548841	3300031879	Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLAGLIALALKLPVD
Ga0306919_114467073	3300031879	Soil	MRGEIIQKLNLEDRKVFRRWLWVNAAIATILLAGLIALAVNVPGDKSETADQ
Ga0306925_106713241	3300031890	Soil	MRGEIINEYQKLSSADQKALRRWLWVNAVVGAILLTGLIALA
Ga0318551_101460631	3300031896	Soil	MRGEFIEYQKLNSEDQKTFRRWLWANTVVGAILLTGLIALALKV
Ga0318520_109524991	3300031897	Soil	MRGEIIQKLNLEDRKVFRRWLWVNAAIATILLAGLIALAVNVPGDKSETADQHATIHH
Ga0306923_101094566	3300031910	Soil	MRGEIINEYQKLNAENQKAFRRWLWVNAVVGAILLTGLIAVALQGD
Ga0306921_102465971	3300031912	Soil	MRGESINEYQKLNSEDQTTSRRWLWANTVVGAILLAGLIALALKLPGDQSGAT
Ga0310912_106650021	3300031941	Soil	MRGEMSNEYLRLDSENQKTFRRWLWANAVVLAILLTGLIVLVSKFPGD
Ga0310912_109805772	3300031941	Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLTG
Ga0310916_111870651	3300031942	Soil	MRGEFINEYQKLNLEDQKTFRRWLWANTVVGAILLAGLIALALKLPGDQSGAT
Ga0310909_100551121	3300031947	Soil	MRGEIIYEYQRLNSEDQKAFRRFLWANTVVGAILLTGLIAVALQG
Ga0310909_101957765	3300031947	Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLEGLIA
Ga0310909_108623381	3300031947	Soil	MRGKFINQYQKLNSEDQKTFRRWLWANTVVGAILLA
Ga0306926_120024811	3300031954	Soil	MRGEIINEYQKLNSEDQKAFRRWLWANAVVGAILLTG
Ga0318531_100128461	3300031981	Soil	MRGEISNEYQKLNSEDQKAFRRWLWANAVVGAILLTGL
Ga0306922_105973942	3300032001	Soil	MRGEIINEYQKLNSKDQKAFRRWLWANTVVGAILLTGL
Ga0306922_113548231	3300032001	Soil	MRGEFINEYQKLNSEDQKTFRRWLWANTVVGAILLAG
Ga0318507_102544751	3300032025	Soil	MRGEIINEYEKLNSEDQKAFRRWLWANAVVGAILL
Ga0310911_100283696	3300032035	Soil	MRGEIINEYQKLNAENQKAFRRWLWVNAVVGAILLTGLIAVALQGDESGAI
Ga0310911_102327843	3300032035	Soil	MRGESINEYQKLNSEDQTTSRRWLWANTVVGAILLAGLIALALKLP
Ga0318559_100999661	3300032039	Soil	MRGEIINEYQKLNSKDQKAFRRWLWANTVVGAILLTGLIVL
Ga0318545_102920911	3300032042	Soil	MRGEIINEYQRLNSEDQKAFRRWLWANAVVGAILLTGLIA
Ga0318506_104288941	3300032052	Soil	MRGEFINEYQKLNSKDQKTFRRWLWVNAVVGAILLTGLIALAVHQ
Ga0318570_101264913	3300032054	Soil	MRGEISNEYQKLNSEDQKAFRRWLWANAVVGAILL
Ga0318533_100670731	3300032059	Soil	MRGESINEYQKLNSEDQTTSRRWLWANTVVGAILLAGLIAVALKLPGDQSGAT
Ga0318510_102416583	3300032064	Soil	MRGEISNEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASNFSGAQSA
Ga0318514_104157191	3300032066	Soil	MRGEIIYEYRRLNWEDQKAFRRFLWANTVVGAILLTELIVLASF
Ga0306924_105006363	3300032076	Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILL
Ga0306924_117238022	3300032076	Soil	MRGEIIHEYRKLNSKDHKAFRRWLWVNTIVGAILVAGLIALTSKSTG
Ga0318518_106517431	3300032090	Soil	MRGEMINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASNFSGAESAAT
Ga0318518_107231862	3300032090	Soil	MRGEFINEYEKLNSEDQKTFRRWLWVNAVVGAILLTGLIALAVHQGDESE
Ga0318577_104007022	3300032091	Soil	MRGEIINEYQRLNSEDQKAFRRWLWANAVVGAILLTGL
Ga0306920_1001867871	3300032261	Soil	MRGEIINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASK
Ga0306920_1002538521	3300032261	Soil	MRGEFINEYQKLNSEDQKAFRRWLWANAVVGAILLTGLIALASKFPGD
Ga0306920_1044665841	3300032261	Soil	MRGEITNEYQKLNPEDQKAFSRWLWVNAVVGAILLAGLITLATRADSTQI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F030526

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences