Metagenome Family F031394

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031394
Family Type	Metagenome
Number of Sequences	182
Average Sequence Length	75 residues
Representative Sequence	MKKSVFTFGLLASSLVMLAVMPLLNNNNFLNVAMAQEYDKYQDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCK
Number of Associated Samples	91
Number of Associated Scaffolds	182

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.85 %
% of genes near scaffold ends (potentially truncated)	80.77 %
% of genes from short scaffolds (< 2000 bps)	89.56 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (86.264 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (24.176 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.055 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.27% β-sheet: 0.00% Coil/Unstructured: 75.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 182 Family Scaffolds
PF14947	HTH_45	7.69
PF01391	Collagen	4.40
PF02518	HATPase_c	2.20
PF00072	Response_reg	1.10
PF02803	Thiolase_C	0.55
PF07995	GSDH	0.55
PF00805	Pentapeptide	0.55
PF08241	Methyltransf_11	0.55
PF02776	TPP_enzyme_N	0.55
PF07452	CHRD	0.55
PF01037	AsnC_trans_reg	0.55
PF01894	UPF0047	0.55
PF00561	Abhydrolase_1	0.55
PF00211	Guanylate_cyc	0.55
PF08423	Rad51	0.55

COG ID	Name	Functional Category	% Frequency in 182 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.55
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.55
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.55
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.55
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.55
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
All Organisms	root	All Organisms	13.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
cellular organisms	root	All Organisms → cellular organisms	13.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	12.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	7.14 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	6.59 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	3.30 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2.75 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	0.55 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.55 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	3.30 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	2.20 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.55 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.55 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.55 %
Candidatus Nitrosotalea	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotalea	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3.30 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2.20 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.55 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.55 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.55 %
unclassified Candidatus Nitrosotalea	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotalea → unclassified Candidatus Nitrosotalea	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	2.20 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	2.20 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.10 %
Desulfobacterales bacterium S5133MH16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH16	0.55 %
Candidatus Nitrosotalea sp. TS	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotalea → unclassified Candidatus Nitrosotalea → Candidatus Nitrosotalea sp. TS	0.55 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.55 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.26 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	2.20 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2.20 %
Candidatus Nitrosocosmicus hydrocola	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	0.55 %
Desulfobacterales bacterium S5133MH16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH16	0.55 %
Candidatus Nitrosotalea sp. TS	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotalea → unclassified Candidatus Nitrosotalea → Candidatus Nitrosotalea sp. TS	0.55 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.55 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_11153962	Not Available	548	Open in IMG/M
3300000890\|JGI11643J12802_10338977	Not Available	551	Open in IMG/M
3300000890\|JGI11643J12802_11541219	Not Available	579	Open in IMG/M
3300000890\|JGI11643J12802_12184328	Not Available	1150	Open in IMG/M
3300000890\|JGI11643J12802_12235223	Not Available	565	Open in IMG/M
3300003987\|Ga0055471_10001598	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3595	Open in IMG/M
3300003987\|Ga0055471_10160031	Not Available	690	Open in IMG/M
3300003992\|Ga0055470_10126741	Not Available	653	Open in IMG/M
3300003996\|Ga0055467_10133142	Not Available	733	Open in IMG/M
3300003996\|Ga0055467_10257006	Not Available	552	Open in IMG/M
3300003997\|Ga0055466_10026695	Not Available	1300	Open in IMG/M
3300003997\|Ga0055466_10037882	Not Available	1146	Open in IMG/M
3300003998\|Ga0055472_10033342	Not Available	1218	Open in IMG/M
3300003999\|Ga0055469_10047853	Not Available	1111	Open in IMG/M
3300003999\|Ga0055469_10269999	Not Available	546	Open in IMG/M
3300004013\|Ga0055465_10084120	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	925	Open in IMG/M
3300004013\|Ga0055465_10247313	Not Available	600	Open in IMG/M
3300004463\|Ga0063356_102538447	Not Available	786	Open in IMG/M
3300004463\|Ga0063356_103040193	Not Available	723	Open in IMG/M
3300004463\|Ga0063356_103409140	Not Available	685	Open in IMG/M
3300004463\|Ga0063356_103708023	Not Available	658	Open in IMG/M
3300004463\|Ga0063356_104288821	Not Available	614	Open in IMG/M
3300004463\|Ga0063356_106023227	Not Available	520	Open in IMG/M
3300004463\|Ga0063356_106171276	Not Available	514	Open in IMG/M
3300005329\|Ga0070683_101626651	Not Available	621	Open in IMG/M
3300005341\|Ga0070691_11063586	Not Available	508	Open in IMG/M
3300005578\|Ga0068854_101301330	Not Available	654	Open in IMG/M
3300005719\|Ga0068861_102248726	Not Available	547	Open in IMG/M
3300005719\|Ga0068861_102580841	Not Available	512	Open in IMG/M
3300006844\|Ga0075428_102677574	Not Available	508	Open in IMG/M
3300006845\|Ga0075421_101045066	All Organisms → cellular organisms → Archaea	921	Open in IMG/M
3300006845\|Ga0075421_101728779	Not Available	675	Open in IMG/M
3300006845\|Ga0075421_101757374	Not Available	669	Open in IMG/M
3300006845\|Ga0075421_102673460	Not Available	516	Open in IMG/M
3300006845\|Ga0075421_102766039	Not Available	506	Open in IMG/M
3300006846\|Ga0075430_101232362	Not Available	616	Open in IMG/M
3300006846\|Ga0075430_101745065	Not Available	511	Open in IMG/M
3300006846\|Ga0075430_101784632	Not Available	505	Open in IMG/M
3300006847\|Ga0075431_100152024	Not Available	2383	Open in IMG/M
3300006847\|Ga0075431_100195066	Not Available	2073	Open in IMG/M
3300006847\|Ga0075431_100258292	Not Available	1768	Open in IMG/M
3300006847\|Ga0075431_100413362	Not Available	1349	Open in IMG/M
3300006847\|Ga0075431_100632719	Not Available	1051	Open in IMG/M
3300006847\|Ga0075431_101163987	Not Available	734	Open in IMG/M
3300006847\|Ga0075431_101624783	Not Available	604	Open in IMG/M
3300006853\|Ga0075420_100386513	Not Available	1211	Open in IMG/M
3300006853\|Ga0075420_101194350	Not Available	654	Open in IMG/M
3300006853\|Ga0075420_101306821	Not Available	623	Open in IMG/M
3300006871\|Ga0075434_102461985	Not Available	522	Open in IMG/M
3300006876\|Ga0079217_10697724	Not Available	682	Open in IMG/M
3300006880\|Ga0075429_100784307	Not Available	835	Open in IMG/M
3300006880\|Ga0075429_101476518	Not Available	592	Open in IMG/M
3300006880\|Ga0075429_101823120	Not Available	528	Open in IMG/M
3300006894\|Ga0079215_10341358	Not Available	851	Open in IMG/M
3300006894\|Ga0079215_11389472	Not Available	548	Open in IMG/M
3300006918\|Ga0079216_11770729	Not Available	529	Open in IMG/M
3300006969\|Ga0075419_10259547	Not Available	1163	Open in IMG/M
3300006969\|Ga0075419_10387032	All Organisms → cellular organisms → Archaea	956	Open in IMG/M
3300006969\|Ga0075419_10575320	Not Available	789	Open in IMG/M
3300006969\|Ga0075419_10798252	Not Available	675	Open in IMG/M
3300006969\|Ga0075419_10884045	Not Available	644	Open in IMG/M
3300006969\|Ga0075419_11067473	Not Available	590	Open in IMG/M
3300009100\|Ga0075418_10190512	Not Available	2184	Open in IMG/M
3300009100\|Ga0075418_10596882	Not Available	1188	Open in IMG/M
3300009100\|Ga0075418_11229706	Not Available	812	Open in IMG/M
3300009100\|Ga0075418_11996081	Not Available	632	Open in IMG/M
3300009100\|Ga0075418_12100521	Not Available	616	Open in IMG/M
3300009100\|Ga0075418_12245582	Not Available	595	Open in IMG/M
3300009146\|Ga0105091_10212589	Not Available	924	Open in IMG/M
3300009146\|Ga0105091_10292023	Not Available	794	Open in IMG/M
3300009147\|Ga0114129_10600380	Not Available	1426	Open in IMG/M
3300009147\|Ga0114129_10852113	Not Available	1158	Open in IMG/M
3300009147\|Ga0114129_11468926	Not Available	839	Open in IMG/M
3300009147\|Ga0114129_11752627	Not Available	756	Open in IMG/M
3300009147\|Ga0114129_12967601	Not Available	559	Open in IMG/M
3300009157\|Ga0105092_10080739	Not Available	1770	Open in IMG/M
3300009157\|Ga0105092_10194043	Not Available	1133	Open in IMG/M
3300009168\|Ga0105104_10014676	All Organisms → cellular organisms → Archaea → TACK group	4772	Open in IMG/M
3300009168\|Ga0105104_10081076	Not Available	1748	Open in IMG/M
3300009168\|Ga0105104_10825642	Not Available	540	Open in IMG/M
3300009176\|Ga0105242_10904498	Not Available	883	Open in IMG/M
3300009553\|Ga0105249_10237659	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	1800	Open in IMG/M
3300009553\|Ga0105249_10765104	Not Available	1028	Open in IMG/M
3300009553\|Ga0105249_11138012	Not Available	851	Open in IMG/M
3300009789\|Ga0126307_10025589	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	4504	Open in IMG/M
3300009789\|Ga0126307_10107980	All Organisms → cellular organisms → Archaea	2209	Open in IMG/M
3300009789\|Ga0126307_10149177	Not Available	1871	Open in IMG/M
3300009789\|Ga0126307_10838791	Not Available	742	Open in IMG/M
3300009840\|Ga0126313_10149099	Not Available	1765	Open in IMG/M
3300010036\|Ga0126305_10343956	Not Available	975	Open in IMG/M
3300010036\|Ga0126305_10352299	Not Available	964	Open in IMG/M
3300010036\|Ga0126305_10433966	Not Available	870	Open in IMG/M
3300010036\|Ga0126305_10888333	Not Available	608	Open in IMG/M
3300010038\|Ga0126315_10156027	Not Available	1354	Open in IMG/M
3300010040\|Ga0126308_10139633	Not Available	1522	Open in IMG/M
3300010040\|Ga0126308_10143496	Not Available	1502	Open in IMG/M
3300010040\|Ga0126308_10216176	Not Available	1236	Open in IMG/M
3300010040\|Ga0126308_11382044	Not Available	500	Open in IMG/M
3300010041\|Ga0126312_11091732	Not Available	586	Open in IMG/M
3300010044\|Ga0126310_10759288	Not Available	741	Open in IMG/M
3300010045\|Ga0126311_10030725	Not Available	3302	Open in IMG/M
3300010045\|Ga0126311_10169899	Not Available	1569	Open in IMG/M
3300010045\|Ga0126311_10354026	Not Available	1119	Open in IMG/M
3300010166\|Ga0126306_10003462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH16	9171	Open in IMG/M
3300010166\|Ga0126306_10410055	Not Available	1061	Open in IMG/M
3300010166\|Ga0126306_11355968	Not Available	588	Open in IMG/M
3300010400\|Ga0134122_12338918	Not Available	581	Open in IMG/M
3300012897\|Ga0157285_10088018	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	833	Open in IMG/M
3300012911\|Ga0157301_10079784	Not Available	918	Open in IMG/M
3300012943\|Ga0164241_11227511	Not Available	554	Open in IMG/M
3300013096\|Ga0157307_1078769	Not Available	666	Open in IMG/M
3300013096\|Ga0157307_1114517	Not Available	589	Open in IMG/M
3300014254\|Ga0075312_1139832	Not Available	530	Open in IMG/M
3300014259\|Ga0075311_1044212	All Organisms → cellular organisms → Archaea	854	Open in IMG/M
3300014314\|Ga0075316_1020537	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1286	Open in IMG/M
3300015077\|Ga0173483_10160094	Not Available	1002	Open in IMG/M
3300015077\|Ga0173483_10531880	Not Available	633	Open in IMG/M
3300015077\|Ga0173483_10542633	Not Available	628	Open in IMG/M
3300015077\|Ga0173483_10816131	Not Available	540	Open in IMG/M
3300015373\|Ga0132257_103310764	Not Available	587	Open in IMG/M
3300018031\|Ga0184634_10556834	Not Available	507	Open in IMG/M
3300018073\|Ga0184624_10154233	Not Available	1011	Open in IMG/M
3300018073\|Ga0184624_10393471	Not Available	616	Open in IMG/M
3300018432\|Ga0190275_10022658	All Organisms → cellular organisms → Archaea	4906	Open in IMG/M
3300018432\|Ga0190275_10819952	Not Available	995	Open in IMG/M
3300018432\|Ga0190275_10852366	Not Available	977	Open in IMG/M
3300018432\|Ga0190275_11574145	Not Available	735	Open in IMG/M
3300018432\|Ga0190275_12208711	Not Available	629	Open in IMG/M
3300018466\|Ga0190268_10323060	Not Available	942	Open in IMG/M
3300018466\|Ga0190268_10596667	Not Available	781	Open in IMG/M
3300018469\|Ga0190270_10674209	Not Available	1021	Open in IMG/M
3300018469\|Ga0190270_11751798	Not Available	676	Open in IMG/M
3300018469\|Ga0190270_12950134	Not Available	538	Open in IMG/M
3300018476\|Ga0190274_10290773	All Organisms → cellular organisms → Archaea	1513	Open in IMG/M
3300018481\|Ga0190271_10050803	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotalea → unclassified Candidatus Nitrosotalea → Candidatus Nitrosotalea sp. TS	3531	Open in IMG/M
3300018481\|Ga0190271_10053556	Not Available	3456	Open in IMG/M
3300018481\|Ga0190271_10206207	All Organisms → cellular organisms → Archaea	1962	Open in IMG/M
3300018481\|Ga0190271_10682306	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1150	Open in IMG/M
3300018481\|Ga0190271_12635455	Not Available	603	Open in IMG/M
3300018920\|Ga0190273_12092826	Not Available	528	Open in IMG/M
3300019356\|Ga0173481_10090012	Not Available	1156	Open in IMG/M
3300019884\|Ga0193741_1019163	Not Available	1761	Open in IMG/M
3300025537\|Ga0210061_1001387	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	3755	Open in IMG/M
3300025537\|Ga0210061_1003422	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	2448	Open in IMG/M
3300025791\|Ga0210115_1037518	Not Available	1056	Open in IMG/M
3300025795\|Ga0210114_1003192	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	4071	Open in IMG/M
3300025961\|Ga0207712_10315246	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1288	Open in IMG/M
3300026075\|Ga0207708_11690211	Not Available	556	Open in IMG/M
3300026118\|Ga0207675_101578948	Not Available	677	Open in IMG/M
3300026535\|Ga0256867_10002887	All Organisms → cellular organisms → Archaea	7402	Open in IMG/M
3300027075\|Ga0214467_1011636	All Organisms → cellular organisms → Archaea	904	Open in IMG/M
3300027552\|Ga0209982_1038368	Not Available	761	Open in IMG/M
3300027637\|Ga0209818_1075100	Not Available	859	Open in IMG/M
3300027637\|Ga0209818_1160147	Not Available	637	Open in IMG/M
3300027650\|Ga0256866_1016704	Not Available	1849	Open in IMG/M
3300027650\|Ga0256866_1077601	Not Available	890	Open in IMG/M
3300027691\|Ga0209485_1154974	Not Available	687	Open in IMG/M
3300027743\|Ga0209593_10044694	Not Available	1717	Open in IMG/M
3300027743\|Ga0209593_10297174	Not Available	555	Open in IMG/M
3300027886\|Ga0209486_10811754	Not Available	613	Open in IMG/M
3300027907\|Ga0207428_10051251	Not Available	3300	Open in IMG/M
3300027907\|Ga0207428_10625633	Not Available	774	Open in IMG/M
3300027909\|Ga0209382_10114570	Not Available	3147	Open in IMG/M
3300027909\|Ga0209382_10485443	All Organisms → cellular organisms → Archaea	1363	Open in IMG/M
3300027956\|Ga0209820_1209985	Not Available	544	Open in IMG/M
3300030006\|Ga0299907_10566595	Not Available	888	Open in IMG/M
3300031229\|Ga0299913_10026402	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	5434	Open in IMG/M
3300031892\|Ga0310893_10155164	Not Available	893	Open in IMG/M
3300031911\|Ga0307412_10874230	Not Available	786	Open in IMG/M
3300031944\|Ga0310884_10979985	Not Available	524	Open in IMG/M
3300032002\|Ga0307416_101869986	Not Available	704	Open in IMG/M
3300032002\|Ga0307416_102362006	Not Available	632	Open in IMG/M
3300032002\|Ga0307416_102795088	Not Available	584	Open in IMG/M
3300032002\|Ga0307416_103028259	Not Available	562	Open in IMG/M
3300032002\|Ga0307416_103104154	Not Available	556	Open in IMG/M
3300032003\|Ga0310897_10155019	Not Available	966	Open in IMG/M
3300032005\|Ga0307411_11078667	Not Available	723	Open in IMG/M
3300032012\|Ga0310902_11149711	Not Available	545	Open in IMG/M
3300032013\|Ga0310906_10508316	Not Available	816	Open in IMG/M
3300032075\|Ga0310890_10591011	Not Available	857	Open in IMG/M
3300032126\|Ga0307415_102135581	Not Available	547	Open in IMG/M
3300034151\|Ga0364935_0194902	Not Available	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.54%
Host-Associated	Host-Associated	38.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.60%
Plants	Host-Associated → Plants	38.46%
Aquatic	Environmental → Aquatic	15.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.32%
Marine	Environmental → Aquatic → Marine	8.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Freshwater	Environmental → Aquatic → Freshwater	5.49%
Sediment	Environmental → Aquatic → Sediment	1.65%
Floodplain	Environmental → Terrestrial → Floodplain	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.32%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%
Loam	Environmental → Terrestrial → Soil → Loam	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.22%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	8.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.10%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	24.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.58%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	12.09%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	8.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.40%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_111539621	3300000858	Soil	ASSMVMLAVMPLLNNNNSAMAQGYYDERSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFDDKDDRKDN
JGI11643J12802_103389771	3300000890	Soil	MYKSALTFGVLISSLVMLVVMPFLNNNSFLLNSAMAQEYDKYGDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKH
JGI11643J12802_115412191	3300000890	Soil	MHKSRTTTTFVLLASSLVMLAVMPLLNQNNGFSNIAMAQGYYGDDSYSQYPTDDKKYECRTGPFEGFFVSSVEFCDAK
JGI11643J12802_121843281	3300000890	Soil	MHKQSVVFTFGLLASSLVMLAVMPLLNNNIAAIAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFVGSVEFCKHVKFDN
JGI11643J12802_122352231	3300000890	Soil	MHKSTVFTFGLLLSSLVMLTAMPLFFNNNNVAMAQGYDTYGDSYSKYPTDDKKYECRTGPFEGFFVSSVEFCK
Ga0055471_100015981	3300003987	Natural And Restored Wetlands	MHKSILTFGLLASSLVMLVVMPFLNNNNSFLANTAMAQGYYDDDSYSTYPTDDNKYECQTGPLE
Ga0055471_101600311	3300003987	Natural And Restored Wetlands	MHKSVVVTFGFLLSSLVLLAVIPLFNNSFSNTAMAQGYHAGYGDSYYSQYPTDDKKYECRTGPFEG
Ga0055470_101267411	3300003992	Natural And Restored Wetlands	VKKSVFTFVLLASSLVMLAVMPILNNSAAMAQGYHNYGDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKFKFDDKDRKD
Ga0055467_101331421	3300003996	Natural And Restored Wetlands	MHNSTITTTFVLLATLVMLAIMPFLNNNNSFSNTAIAQEYDKYGDSYYSIYQTDDKKYECRTGPFEGFFVSSVEFVNILWYCYM*
Ga0055467_102570061	3300003996	Natural And Restored Wetlands	MHKSRTTTAFVLLASSLVMLSAIPLFNNNAAFAQGYDTYGDSSYSQYPTDDKKYECRTGPFEGFFVSSV
Ga0055466_100266951	3300003997	Natural And Restored Wetlands	MDMHKSAGVFTFGLLMSSLVMLSAMPVLNSQNSFSNTAAMAQEYEDYNYGDNSYSQYPTDDKKYECRTGPFEGFF
Ga0055466_100378821	3300003997	Natural And Restored Wetlands	MKKSVFTFGLLTISLVMLAVMPILNNNHSFANTAIAQKYDKYGNSSYSQYPTDDKKYECRTGPFEGFFVS
Ga0055472_100333421	3300003998	Natural And Restored Wetlands	VKKSVYTFGLLASSLIMLVIVPILNNNVAMAQGYYDNSYYSQYPTEDKKYECRTGPFEGFFVSSVEFC
Ga0055469_100478532	3300003999	Natural And Restored Wetlands	MKKSVFTFGLLTISLVMLAVMPILNNNHSFANTAIAQKYDKYGNSSYTQYHTDDKKYECRTGPFEGFFVSSVEFCKHV
Ga0055469_102699991	3300003999	Natural And Restored Wetlands	MYKSALTFGLLASSLVMLVIMPFLNQNNSFFSNVMAQEYDKYGDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFD
Ga0055465_100841202	3300004013	Natural And Restored Wetlands	MYKRVRALTFGILASSLVMLVLVPFLNQQQQQQNSFPLNPAMAQEYDKYADSSYSQYPTDDKKYECR
Ga0055465_102473132	3300004013	Natural And Restored Wetlands	MHKSALTFGLLSCSLVMLAIMPLLNNNNSFLNVMAQEYDKYGDSSYSRYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDD
Ga0063356_1025384471	3300004463	Arabidopsis Thaliana Rhizosphere	MHKSRTTTTFVLIASTLGMLAVMPFLNNNAAMAQGYYDDSYSQYPTDDKKYECRTGPFEGFFVSSVEFC
Ga0063356_1030401932	3300004463	Arabidopsis Thaliana Rhizosphere	MHKSALTFGVLIASLVMLAVMPLFNNYVAMAQGYDNYGDSYSQYPTDDNKYQCRTGPFEGFFVS
Ga0063356_1034091401	3300004463	Arabidopsis Thaliana Rhizosphere	MSSLVMLSAVPILNNNNGAMAQGYYGDNSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDDKKRDGKVGPQGP
Ga0063356_1037080231	3300004463	Arabidopsis Thaliana Rhizosphere	MHKSVRRIFTFVVLASSLIMLSAIPMLNNNFTKTVMAQGYYDDNSYNSQYPTDDKKYECRTGPFEG
Ga0063356_1042888211	3300004463	Arabidopsis Thaliana Rhizosphere	MHKSVVVTFGFLLSSLVLLAVIPLFNNSFSNTAMAQGYDAGYGDSYYSQYPTDDKKYECRTGPFEGFFVSSV
Ga0063356_1060232271	3300004463	Arabidopsis Thaliana Rhizosphere	MHKSRTTTTFVLLASSLVMLAVTPLLNQNNGFSNTAMAQGYYDESYSQYPTDDKKYECRTGPFEGFFVSSVEFCDAKKFDDRDKDKQG
Ga0063356_1061712762	3300004463	Arabidopsis Thaliana Rhizosphere	VKNSVFTFGFLLSSIVMLSAIPLFNNNSAMAQGYDIYRDNGYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDKFD
Ga0070683_1016266511	3300005329	Corn Rhizosphere	MHKSVRVFTFGLLMSSLVMLAIMPVLNQQQQNIFTNTAMAQGYDNNSYGDNNSYYSQYPTDDKKYECRTGPFEGFF
Ga0070691_110635861	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MHKSKTTFALLASSLVMLLAMPLLNNNNSAMAQGYYGDSSSNYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKH
Ga0068854_1013013301	3300005578	Corn Rhizosphere	MYLLTSIIFYLFSNTMQKKSVYTFGLLTSILVMLVVMPFLNQNNNSFIPNVIAQEYDKYRDSSYSQYPTDDNKYQCRTG
Ga0068861_1022487261	3300005719	Switchgrass Rhizosphere	MKKSVFTFALLASSLVMLALTPFLNNNAALTQEYDKY*DSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKF
Ga0068861_1025808411	3300005719	Switchgrass Rhizosphere	MYQSALTFGLLASSLVMLLVMPIVNNNNVAIAQGYNTGSYYSEYPTDDKKYECRTGPFEG
Ga0075428_1026775741	3300006844	Populus Rhizosphere	MKSEIFTFGLLASSLVMLAAIPLLNNNVSNIVMAQEYDKYRDSYYSQYPTDDKKYECRT
Ga0075421_1010450662	3300006845	Populus Rhizosphere	MHKSVVATFGFLLSSMVMLAAMPLFNNNISNIVMAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFV
Ga0075421_1017287791	3300006845	Populus Rhizosphere	MHKSVRRVFTFVLLTSSLVMLSAIPMLNNNNSFTKTAMAQGYDNYYGDSSYSQYPTDDKKYECQRGPFEGFFVSSVEFCDAK
Ga0075421_1017573741	3300006845	Populus Rhizosphere	MKKSIFTFGLLMSTLVMLAAIPLFNNNTVVLAQGYYEDSSYSQYPTDENKYQCRTGPFEGFFVSS
Ga0075421_1026734601	3300006845	Populus Rhizosphere	MKSEIFTFGLLASSLVMLAAIPLLNNNVSNIVMAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFV
Ga0075421_1027660391	3300006845	Populus Rhizosphere	MHNKKSVLSFGLLMSSLVMLSTIPIFNNNNTNTVAMAQEYDKYQDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHIKFDKDDRKD
Ga0075430_1012323621	3300006846	Populus Rhizosphere	MHKSLFTFVLLASSLVMLSAMPLLNNNAAMAQGYYDDSSYSQYPTDENKYQCRTGPFEGFFVSS
Ga0075430_1017450652	3300006846	Populus Rhizosphere	LASSLVMLVLMPFLNNNNSFSNTTVMAQYYKYGDSHYNTYQTDDKKYESRNELFEGFFNSVDLIHYHEY*
Ga0075430_1017846321	3300006846	Populus Rhizosphere	MSKSIRALTFGILASSLVMLVLVSFLNQQQQQNSFPLNPAKAQEYDKYGDSSYSQYPTDDKKYECRTGPFEGFFVSS
Ga0075431_1001520243	3300006847	Populus Rhizosphere	MHKSVLTFGLLMSSLIMLAIVPFLNNNNPAMAQGYYDDNSSYSQYPTDDKKYECRTGPFKDSL*
Ga0075431_1001950664	3300006847	Populus Rhizosphere	MHKSVRRVFTFVLLTSSLVMLSAIPMLNNNNSFTKTAMAQGYDNYYGDSSYSQYPTDDKKYECQRGPFEGFFVSSVEFC
Ga0075431_1002582921	3300006847	Populus Rhizosphere	MKKSGLTFELLMSSLIMLAAIPLFNNNTVAIAQEYDKYQDSYYSQYPTDDKKYECRTGPF
Ga0075431_1004133621	3300006847	Populus Rhizosphere	MSTLVMLAAIPLFNNNTVVLAQGYYEDNSYSQYPTEDNKYQCRTGPFEGFFVSSVEFCKHVKFDKDDDRKD
Ga0075431_1006327192	3300006847	Populus Rhizosphere	MHKQSVVFTFGLLASSLVMLAVMPLLNNNIAAIAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFC
Ga0075431_1011639871	3300006847	Populus Rhizosphere	MKKSLFTFGLLASSLVMLAIVPFLNNNNSFSNTAMAQGYYGDDSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHGKFDDKDKD
Ga0075431_1016247831	3300006847	Populus Rhizosphere	MHKSMVFTFGVLLTSLVMLSVMPIINNSNSILNAAIAQGYDTYGDSSYSAYPTDDKKYECRTGPFEGFFVS
Ga0075420_1003865131	3300006853	Populus Rhizosphere	MHKSRTTTTFVLLASSMVMLAVMALLNNNNAAMAQGYYNERSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHIKFDDKDD
Ga0075420_1011943501	3300006853	Populus Rhizosphere	MRKSGLTFGLLASSLVMLAVMPFLNQSNSFSNVMAQEYDKYGDSHYSQYPTDNKKYECRTGPFEGFFVGSVEFCKHV
Ga0075420_1013068211	3300006853	Populus Rhizosphere	MHKSAITFGLLLSSLVMLVLVPFLTQQQQYLFSYAMAQEYNDNPYGYSSYYSQYPTDD
Ga0075434_1024619851	3300006871	Populus Rhizosphere	MHKSILTFGLLASSLVMLGILPILNNNTVAEAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKH
Ga0079217_106977241	3300006876	Agricultural Soil	MHKSILTFVLLTSSLVMLAIMPLFNQNNFSNVKAQEYDSYDDDYDMYSKYPTEVNKYECR
Ga0075429_1007843072	3300006880	Populus Rhizosphere	MRKSGLTFGLLASSLVMLAVMPFLNQSNSFSNVMAQEYDKYGDSHYSQYPTDDKKYECRTGPFEGFFVGSVEFCKHVKFDKDNDRK*
Ga0075429_1014765182	3300006880	Populus Rhizosphere	MHKSVITFGVLLSSLVMLSAIQILNNNNTVAEAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGF
Ga0075429_1018231202	3300006880	Populus Rhizosphere	MKSEIFTFGLLASSLVMLAAIPLLNNNVSNIVMAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHIKFND
Ga0079215_103413582	3300006894	Agricultural Soil	MHKSTRTTMTFVLLASSLVMLAVMPLLNQNNGFSNIAMAQGYYGDDSYSQYPTDDKKYECRTGPFEGFFVSSVEFC
Ga0079215_113894721	3300006894	Agricultural Soil	MHKSGVFTFGLLASSLVMLAIMPFLNQNNFLNTAMAQEYDKYGDSSYSQYPTDDKKYECQTGPFEGFFVSSVEF
Ga0079216_117707292	3300006918	Agricultural Soil	MKKSVFTFGLLMSSLVMLSAIPILNNNNNAAMAQGYDNYGDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDDKK
Ga0075419_102595471	3300006969	Populus Rhizosphere	MHKSVVATFGFLLSSMVMLAAMPLFNNNISNIVMAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKFNK
Ga0075419_103870322	3300006969	Populus Rhizosphere	MNKSVFTFVLLASSLGMLAVMSFLNNNTAMAQGYYYDSNSKYPTYDNKYECRTGPFEGFLVSSPEFCKHIKFDDDRKD
Ga0075419_105753202	3300006969	Populus Rhizosphere	MFKNIVKKSLFTFGLLASSMVMLAIMPLLNNNNSFLSTPVMAQQYEDNYYGDNSYSKYPTEDKKYECRTGPFEGFFVSSVEF
Ga0075419_107982521	3300006969	Populus Rhizosphere	MKKSVYTFLLLATSLVMLSAMPLFNKTGVMAQGYDIYRDNGYYSQYPTDDKKYECRTGPFEGFF
Ga0075419_108840452	3300006969	Populus Rhizosphere	MASSLVMIAAMPLLDNNTGAMAQEYDKYRDSSYYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFDNKDDR
Ga0075419_110674732	3300006969	Populus Rhizosphere	MHKSTVFTFGLLLSSLVMLTAMPLFFNNNNVAMAQGYDTYGDSYSKYPTDDKKYECRTGPFEGFFVSSVEFCKHLKFDDK
Ga0075418_101905121	3300009100	Populus Rhizosphere	MRKSALTFGLLASSLVMLVIMPFLNQNNSFFNVMAQEYDKYGDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHV
Ga0075418_105968822	3300009100	Populus Rhizosphere	MKKSGLTFELLMSSLIMLAAIPLFNNNTVAIAQEYDKYQDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDD
Ga0075418_112297061	3300009100	Populus Rhizosphere	MHKSTVLTFGLLVSSLVMLSAMQLLNNNVSNTAMAQGYNDNYYGDNSYYSQYPTDDKKYECRTGPFEGFFVS
Ga0075418_119960811	3300009100	Populus Rhizosphere	MHKSTVFTFGLLASSLVMLAVTPLFNNNIVAMAQGYDNNYNGDNNYSQYPTDDKKYECRTGPFEGFFVSS
Ga0075418_121005211	3300009100	Populus Rhizosphere	MHKSVFTFGLLASSLVMLAVVPFLNQQQNSFLNPSMAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFD
Ga0075418_122455821	3300009100	Populus Rhizosphere	MHKSALTFGLLASSLVMLIVVPFLNQNNFLNKAMAQEYDKYRDSAYSQYPTNDNKYQCRTGPFEGFFVSSVEFC
Ga0105091_102125893	3300009146	Freshwater Sediment	VKKSVFTFGLLASSLVMLGVTPFLNNNSFSNTAMAQGYDDYYSDSYSPYPTDDKKYECRKAPLKDFL*
Ga0105091_102920231	3300009146	Freshwater Sediment	MHKSAITFGLLASSLVMLAVMPLLNNNNSFSNVMAQEYDKYGDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCDAKKFDKKR*
Ga0114129_106003802	3300009147	Populus Rhizosphere	VKKSIFTFGLLASSLVMLVIMPFLNQNNSFLNVMAQGYYGDDSSYSQYATDDNKYQCRTGPFEGFFVSSVEFCKHGKFDDKD
Ga0114129_108521131	3300009147	Populus Rhizosphere	MHKQSVVFTFGLLASSLVMLAVMPLLNNNVSNIVVAQEYDKYRDSYYSQYPTDDKKYECRTGP
Ga0114129_114689261	3300009147	Populus Rhizosphere	MKKSIFTFGLLASSLVMLAVMPFLNQSNSFSNVMAQEYDKYGDSHYSQYPTDDKKYECRTGPFEGFFVGSVEFCKHVKF
Ga0114129_117526272	3300009147	Populus Rhizosphere	MKKSVFIFGLLASSLVMLAVMPYLNNNNFLNAAIAQEYEKYSDSSYSQYPTDDKKYECQTGPFEGFFVSSVEFCKHVKFDKDRDDRKDNN
Ga0114129_129676011	3300009147	Populus Rhizosphere	VKKSIFTFVLLASSLVMLSVMPLLNNNNAAMAQEYDKYRDSSYYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKH
Ga0105092_100807393	3300009157	Freshwater Sediment	MKKSVYTFGLLASSLVMLSLMPILNNNILNPAMAQGYDNYYGDSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFDKDRK
Ga0105092_101940431	3300009157	Freshwater Sediment	MHKSALTFGLLASSLVMLAIMQFLNNNAVLAQGYNSDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKNVKFDKDRKDN
Ga0105104_100146761	3300009168	Freshwater Sediment	MHKSALTFGLLASSLVMLAIVPFLNHSNSFSNLVIAQVYDKYGDSYSKYPPEEKKYECRTGSFEGFFVSSVEYCKNVKFYDKKDIVK*
Ga0105104_100810761	3300009168	Freshwater Sediment	MHKSTTTTFVLLASSLVMLSAMPLFNNNAAMAQGYENNYYGDSGSYSQYPTDDKKYECRTGQFEGFFVSSVEFCKHVKFDDNKRS*
Ga0105104_108256421	3300009168	Freshwater Sediment	MHKSALTFGLLASSLVMLAMMPFLNQNNSFSNVLAQDYDKYGDSYYSTYQTDDKKYECRTGSFEGFFVSSVEFCK
Ga0105242_109044982	3300009176	Miscanthus Rhizosphere	SNIDFHCKRDMHKSVLTFGLLASSLVMLAIIPFLNQNNSFLSNPVMAQEYDKYDSSYSTYQTDDKKYECQTGPFEGFFVSSVEFCKNVNLLIIMM*
Ga0105249_102376592	3300009553	Switchgrass Rhizosphere	MKKSIFTFGLLASSLVMLAIVPILNNNNNHNSFLHPAVAQGYGYDNYGETNYSTYPTDDKKYECRTGPFEGFFVSSVEFCKHGKFDDKRDNK
Ga0105249_107651042	3300009553	Switchgrass Rhizosphere	MHKPVRRVFTFGLLASSLVMLTAMPLFFNNNNVAMAQGYDTYGDSYSKYPTDDKKYECRTGLFEGFFVSSVEFCKQGKFDDKKR*
Ga0105249_111380121	3300009553	Switchgrass Rhizosphere	MKKSVYTFGLLASSLVMLAVMPLLNNYNSFLHPAVAQGYGYDNYGETNYSTYPTDDKKYECRTGPFEGFFVSSVEFCKHGKFDKDDRKD
Ga0126307_100255891	3300009789	Serpentine Soil	MHKSTRTTTTFVLLASSLVMLAVMPLLNQNNGFSNIAMAQGYYGDDSYSQYPTDDKKYECRTGPFEGF
Ga0126307_101079805	3300009789	Serpentine Soil	MKKSVYTFGLLASSLVMLAVVPFLNNNNSFFTTTVMAQEYDNYYGDDNSYSKFPTDDKKYECRTGPFEGFFEVL*
Ga0126307_101491771	3300009789	Serpentine Soil	MHKSVYTFGLLASSLVMLTVMPLLNNNNNNTVAMAQEYDKYRDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHIKF
Ga0126307_108387911	3300009789	Serpentine Soil	MNKAVFTFGLLASSLVMLAILPFLNNNNNTVTMAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFDDRKDND
Ga0126313_101490991	3300009840	Serpentine Soil	MLAVVPFLNQQQQNSVLNTAIGQEYDKYRDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHIKFEDKDDNRKDMRDN
Ga0126305_103439561	3300010036	Serpentine Soil	MKKSVYTFGLLASSLVMLAVVPFLNNNNSFFTTTVMAQEYDNYYGDDNSYSKFPTDDKNYECRTGPFEGFFEVQ*
Ga0126305_103522992	3300010036	Serpentine Soil	MLAVVPFLNQQQQNSVLNTAIGQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHIKFDDKDDNRKDMRDNRN
Ga0126305_104339662	3300010036	Serpentine Soil	VKKSLFTFGLLASSLVMLLVMPFLNNNNDSFLSNTTAMAQEYDKYGDSSYSKYPTDDNKYQCRTGPFEGFFVSSVEF
Ga0126305_108883331	3300010036	Serpentine Soil	VFKNDMKKSVFTFGLLASTLVMLVLVPLLNNNNNSFLRPAMAQGYGYQNDYGDTNYSTYPTDDKKYECRTGPFEGFFVSSVEFCKHI
Ga0126315_101560271	3300010038	Serpentine Soil	MKKSVYTFGLLASSLVMLAVVPFLNNNNSFFTTTVMAQEYDNYYGDDNSYSKFPTDDKKYECRTGSFEGFFEVL*
Ga0126308_101396333	3300010040	Serpentine Soil	MKKSVYTFGLLASSLVMLAVVPFLNNNNSFFTTTVMAQEYDNYYGDDNSYSKFPTDDKKYECRTGPFE
Ga0126308_101434961	3300010040	Serpentine Soil	MHKSIVFTFGLLASSLVMLSAIPLFFNNNNNNSFLTNIVMAQEYDKYQDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFC
Ga0126308_102161761	3300010040	Serpentine Soil	MKKSVYTFGLLASSLVMLSVMPLLNNNNITAMAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFVS
Ga0126308_113820441	3300010040	Serpentine Soil	MYKLALLFGFLLTSLVMLAVTPVLNNNNSFSNTAMAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGFFLSSVEFCKHVK
Ga0126312_110917321	3300010041	Serpentine Soil	MMHKSRTTTTFVLLASSLVMLGVTPFLNQNNGFSNIAMAQGYYGDDSYSQYPTDDKKYECRT
Ga0126310_107592881	3300010044	Serpentine Soil	MKKSVYTFGLLASSLVMLSVMPLLNNNNITAMAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHIKFDDKDDRKD
Ga0126311_100307251	3300010045	Serpentine Soil	MRKSVFTFGLLASSLVMLSAIPLFNNNNNTVAMAQEYDKYRDSYYSQYPTDDKKYECRTGPFEG
Ga0126311_101698992	3300010045	Serpentine Soil	MKKSVYTFGLLASSLVMLAVVPFLNNNNGFFTTTVMAQEYDNYYGDDNSYSKFPTDDKKYECRTGPFEGFFEVL*
Ga0126311_103540262	3300010045	Serpentine Soil	MKKSVFTFGLLASSLVMLAVMPLLNNNNFLNVAMAQEYDKYQDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCK
Ga0126306_100034621	3300010166	Serpentine Soil	MKKSVYTFGLLASSLVMLGITPFLNNNSFFSTTAMAQGYDDYYSDVSSYSKYPTDDKKYECRTGAFEGFFVSSVEFCKHIKFDDKDRKDI
Ga0126306_104100551	3300010166	Serpentine Soil	MHKSVYTFGLLASSLVMLTVMPLLNNNNNNTVAMAQEYDKYRDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDDKDD
Ga0126306_113559682	3300010166	Serpentine Soil	MHKSVYTFGLLASSLVMLLVMPFLNNNNNSFLSNTTVMAQEYDKYQDNSYSKYPTDDKKYECRTGPFEGFFVSSVEFCKHIKFDDDKD
Ga0134122_123389181	3300010400	Terrestrial Soil	MRKSALTFGLLASSLVMLVIMPFLNQNNSFSNLVMAQEYDKYGDSSYSQYPTNDKKYECRTGPFEGFFLSSVEFCKHV
Ga0157285_100880182	3300012897	Soil	MYKSQVITFGLLASSLVMLVLMPFLNNNSFSNTAMAQEYDKYRDSSYSQYPTDDKKYECRTGPFEGFL*
Ga0157301_100797841	3300012911	Soil	MHKSTVFTFGLLASSLVMLAVTPLFNNNIVAMAQGYYEDSSYSQYPTDENKYQCRTGPFEGFFVS
Ga0164241_112275111	3300012943	Soil	MHKSTTTTLTFGLLTSSLVMLVIMPLLNQNNSFSNVMAQEYDKYGDSSYSQIPTEDKKYECRTGPFEGFFVSSVEFC
Ga0157307_10787691	3300013096	Soil	MRTSIFTFGVLLSSLVMLSVMPFFNNNNTVAEGQEYDKYRDSSYSQYPTDDKKYECRTGPFEG
Ga0157307_11145171	3300013096	Soil	MHKSALIFGLLASSLVMLAIMPFLNQNNSFLSNVMAQEYDKYGDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVK
Ga0075312_11398322	3300014254	Natural And Restored Wetlands	MHKSIFTFVLLASSLVMLSAMPLLNNNNSFLLNTAMAQGYDNTYGYDSYYSQYPTEDKKYECRTGPFEGFFVSSVEFCKHIKFDDRKDN
Ga0075311_10442121	3300014259	Natural And Restored Wetlands	MHKKSVFTFGFLLSSLVMLSAIPLLNNNPAMAQGYYDDRYSQYPTDDKKYECRTGPFEGFFVSSVEFCKFKDD
Ga0075316_10205373	3300014314	Natural And Restored Wetlands	MHNSTITTTFVLLATLVMLAIMPFLNNNNSFSNTAIAQEYDKYGDSYYSTYQTDDKKYECRTGPFEGFFVSSVEFVNILWYCYM*
Ga0173483_101600942	3300015077	Soil	MKKSLFTFGLLASSLVMLAVMPLFNNNNSLLNTAMAQGYDANYGDNYYSQYPTDDKKYECRTGPAEGILC*
Ga0173483_105318801	3300015077	Soil	MHKSALIFGLLASSLVMLAIMPFLNQNNNFSNVMAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGFFVSSVE
Ga0173483_105426331	3300015077	Soil	MHKSIRLGFTFGLLASSLVMLSLMPLLNSNNNTLAMAQEYYDDSSYSQYPTDDKKYECRTGPFEGFFVSSLEF
Ga0173483_108161312	3300015077	Soil	MHKSALTSGLLASSLVMLAIVPFLNNNNISNTAIAQGYNDDNSYYSQYPTDDKKYECRTGPFEGFL*
Ga0132257_1033107642	3300015373	Arabidopsis Rhizosphere	MHKSTTTITFGVLMTSLVMLAVVPLLNNNNFSNIAVAQGYNDNYYGDSSSNSYYSQYPTDDKKYECQTGPLEGFFTSSVEFCK
Ga0184634_105568341	3300018031	Groundwater Sediment	MHKSALTFGFLMSSLVILAVVPFLNNNAAMTQEYDRYEDSSYSQYPTGDKPYECQTGPFEGFFVGSVEFCKNVKFADNN
Ga0184624_101542332	3300018073	Groundwater Sediment	VVKKSVKKSLFTFGLLAISLVMLVLVPFLNQQQNSFFSNVMAQEYDKYGDSSYSQYPTDDKKYQCRTGPFEGFFVGSVEFCKFNKFDKDEFF
Ga0184624_103934712	3300018073	Groundwater Sediment	MHKSILTFGLLASSLVMLVIMPFLNQNNSFSNVMAQEYDKYGDSSYSQIPTDDKKYECRTGPFEGFFVSSVE
Ga0190275_100226584	3300018432	Soil	MHKSEKFTFVLLASSLVMLMIMPFLNQNNGFSNTVMAQEYDKYGDNSYSKYPKDDKKYECRTGPFEGFYLQIKISKNY
Ga0190275_108199522	3300018432	Soil	MHKSTTTFVLLASSLVMLSAMPLFNNNTVAMAQGYNGDNSYSKYPTDDKKDECQTGPFEGFFVSSVEKR
Ga0190275_108523662	3300018432	Soil	MHKSVFTFGLLASSLVMLAIMPFLNQNNSFSNVMAQEYDKYGDSSYSQYPTDVKKYECRTGPFEGFFVSSVEFCKHVKFDDRRDH
Ga0190275_115741451	3300018432	Soil	MHKSVLTFGLLSSSLVMLAIMPFLNNNAAMAQGYYDDSYSTYPTDDKKYECRTGPFEG
Ga0190275_122087112	3300018432	Soil	MHKSAITFELLASSLVMLAVMPFLNNNAAIAQGYYNYGNSYSQYPTDDKKYECRTGPLEGFFVSS
Ga0190268_103230602	3300018466	Soil	MNKSALTFGLLASSLVMLAIVPLLNNNAAMAQGYYDERSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFDDRKNNDRKDN
Ga0190268_105966671	3300018466	Soil	MHKSVXRGLTVGLLASSLVMLLVMPFLNNNNSILSNTAMAQGYNTYDDSSYSQYPTDDKKYECQTGPFEGFFVSSV
Ga0190270_106742091	3300018469	Soil	MHKSALTFGLLASSLVMLAIIPLLNNNNSFSNTAIAQEYDKYGDSSYSQYPTDNKKYECRTGPFEGFFV
Ga0190270_117517981	3300018469	Soil	MHKSVITFGLLAISMVMLIVMPFLNNNSFLSNPAMAQGYHAGYGDSSNYSKYPTDDNKYECRTGPLEGFFVSS
Ga0190270_129501341	3300018469	Soil	MYKKSVLIFGFLLSSLVMLSAIPLLNNNNTVAMAQEYDKYGDSSYSQYPTNDNKYQCRSGPFKASS
Ga0190274_102907732	3300018476	Soil	MHKSEKFTFVLLASSLVMLMIMPFLNQNNGFSNTVMTQEYDKYGDNSYSKYPKDDKKYECRTGPFEGFYLQIKISKNY
Ga0190271_100508032	3300018481	Soil	MHKSVMFTFALLTSSLVVLSAMPLLNNNIVAMAQGYDNYYGDSSYNTYPTDDKKYECRTGPLEGFFTSSVEFCKHVKFQCLTKFFM
Ga0190271_100535562	3300018481	Soil	MHKSALTFGLLASSLVMLAIIPLLNNNNSFSNTAIAQEYDKYGDSSYSQYPTDNKKYECRTGPFEGFFVSSVEFCKHVKFDNDRKDHRD
Ga0190271_102062073	3300018481	Soil	MYKSQLFTFGFLLSSLVMLSAIPLLNNNSAMAQEYDKYGDSSYSQYPTDDKKYECRTG
Ga0190271_106823061	3300018481	Soil	MHKSEKFTFVLLASSLVMLMIMPFLNQNNGFSNTVMAQEYDKYGDNSYSKYPTDDKKYECRTGPFEGFYLQIKISKNY
Ga0190271_126354551	3300018481	Soil	MKKSVYTFVLLASSLVMLSAMPLLNNKTGAMAQGYDIYRDNGYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDDK
Ga0190273_120928261	3300018920	Soil	MHKSVYTFGLLASSLVMLSAMPLFNNNAAFAQGYETYGDSSYSKYPTDDKKYECKTGPFEGFFVSSVEFCKHIKFDDRKDH
Ga0173481_100900122	3300019356	Soil	MHKSTVFTFGLLASSLVMLAVTPLFNNNIVAMAQGYYEDSSYSQYPTDENKYQCRTGPFEGFFVSSVEFCKHVKFDNKDDRKDI
Ga0193741_10191631	3300019884	Soil	MIKSVFTFGLLASSLVMLVVMPFLNNNSFSNTAMAQGYDADYYGDNSYSKYPTYDNKYECQTGPLEGFFVSSVEFCKHVKFND
Ga0210061_10013871	3300025537	Natural And Restored Wetlands	MKKSVFTFGLLTISLVMIAVMPILNNNHSFANTAIAQKYDKYGNSSYSQYPTDDKKYECRTGPFEGFFVSS
Ga0210061_10034224	3300025537	Natural And Restored Wetlands	MNSVFTFGLLASSLVMLVLVPFLNQQQNSFSNVMAQEYDKYGDSSYSQYPTDDKKYECRTGPFE
Ga0210115_10375181	3300025791	Natural And Restored Wetlands	MYKSQLFTFGFLLSSLVMLSAIPLLNNNIVAMAQEYDKYRDSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKLDDKDR
Ga0210114_10031921	3300025795	Natural And Restored Wetlands	MHKSILTFGLLASSLVMLVVMPFLNNNNSFLANTAMAQGYYDDDSYSTYPTDDNKYECQTGPLEGFFVSSVEFCKHVNFNDKDDRKDNRT
Ga0207712_103152462	3300025961	Switchgrass Rhizosphere	MHKPVRRVFTFGLLASSLVMLTAMPLFFNNNNVAMAQGYDTYGDSYSKYPTDDKKYECRTGLFEGFFVSSVEFCKQGKFDDKKR
Ga0207708_116902111	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHKSTRTTTTFVLLASSLVMLAAMPVLNQQNSLFSNTAMAQGYNDDNSYYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHIKFDDRKDHR
Ga0207675_1015789481	3300026118	Switchgrass Rhizosphere	MHKSAIIFGLLASSLVMLSAVPILNNNNTVAMAQGYNDYDGVNSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDDRKDHS
Ga0256867_1000288712	3300026535	Soil	MHKSVLTFGLLASSLVMLAVVPVLNQQNSLLNTAMAQGYDKYGDNSYYSQYPTDDKKYECRTGPFEGFFVSSVEFC
Ga0214467_10116362	3300027075	Soil	MHKSVLTFGLLASSLVMLAVVPVLNQQNSLLNTAMAQGYDNYGDNSYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDKDRKDIRDN
Ga0209982_10383681	3300027552	Arabidopsis Thaliana Rhizosphere	MHKSALTFGLLASSLVMLGILPILNNNTVAMAQEYDKYRDSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFDDRKDHRDIDNR
Ga0209818_10751001	3300027637	Agricultural Soil	MHKSGVFTFGLLASSLVMLAVMPLFNNNNSFSNTAMAQGYDNYYGDSGSYSKYPTDDKKYECRTGPFEGFFVSSV
Ga0209818_11601472	3300027637	Agricultural Soil	MHKSILTFVLLTSSLVMLAIMPLFNQNNFSNVKAQEYDSYDDDYDMYSKYPTEVNKYECRTGPFEGFFVGSVEFCKFNKFDDKKDDRKD
Ga0256866_10167041	3300027650	Soil	MHKSVVFTFGLLATSLVMLVIMPLLNNNTAMAQGYDNYGDSDYSQYPTDDKKYECRTGPFEGFLLSFSRIL
Ga0256866_10776012	3300027650	Soil	MHKSVMFTFVLLASSLVMLAIVPLLNNNSFSNTAMAQGYDDYYSDNSYYSQYPTDDKKYECRTGPLEGFFTSSVEFCKNVKFDDKKRDSKVG
Ga0209485_11549742	3300027691	Agricultural Soil	MHKSILTFGLLASSLVMLTVMPLFNNNTSAMAQGYDDNYYGDSSSYSQYPTNDKKYECRFGNIKP
Ga0209593_100446942	3300027743	Freshwater Sediment	MHKSALTFGLLASSLVMLAIVPFLNHSNSFSNLVIAQVYDKYGDSYSKYPPEEKKYECRTGSFEGFFVSSVEYCKNVKFYDKKDIVK
Ga0209593_102971741	3300027743	Freshwater Sediment	MHKSTTTTFVLLASSLVMLSAMPLFNNNAAMAQGYENNYYGDSGSYSQYPTDDKKYECRTGQFEGFFVSSVEFCKHVKFDDNKRS
Ga0209486_108117541	3300027886	Agricultural Soil	VNLSTSIIFKLSKNVVKKSVFTFGLLASLLVMLSAMPLFNNNAAMAQGYDKYGDSYYSQYPTDDKKYECRTGPFE
Ga0207428_100512512	3300027907	Populus Rhizosphere	MHKSVLTFGLLMSSLIMLAIVPFLNNNNPAMAQGYYDDNSSYSQYPTDDKKYECRTGPFKDSL
Ga0207428_106256331	3300027907	Populus Rhizosphere	MHKSVFTFGLLASSLVMLAVVPFLNQQQNIFLNPAMAQGYDNNYYSDSYSPYPTDDKKYECQTGPLE
Ga0209382_101145703	3300027909	Populus Rhizosphere	MKKSGLTFELLMSSLIMLAAIPLFNNNTVAIAQEYDKYQDSYYSQYPTDDKKYECRTGPFEGFFVSSVEF
Ga0209382_104854432	3300027909	Populus Rhizosphere	MSKSIRALTFGILASSLVMLVLVSFLNQQQQQNSFPLNPAKAQEYDKYGDSSYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKF
Ga0209820_12099851	3300027956	Freshwater Sediment	MHKSRTTTTFVLLASSMVMLAVMPLLNNNNSAMAQGYYDERSSYSQYPTDDNKYQCRTGPFEGFFVSSVEFCKHVKFDD
Ga0299907_105665952	3300030006	Soil	AMHKSVLTFGLLASSLVMLAVVPVLNQQNSLLNTAMAQGYDKYGDNSYYSQYPTDDKKYECRTGPFEGFFVSSVEFC
Ga0299913_100264027	3300031229	Soil	MHKSVLTFGLLASSLVMLAVVPVLNQQNSLLNTAMAQGYDKYGDNSYYSQYPTDDKKYECRTGPFKGFFVSSAEFC
Ga0310893_101551641	3300031892	Soil	MHKSALTFGLLASSLVMLAIMPYLNQNNSFSNTIMAQEFDSYYDSKISYYPTNINKYECKKGAFEGFFVSTIEFCNANF
Ga0307412_108742301	3300031911	Rhizosphere	MYKSQLFTFGFLMSSLVMLAAIPLFNNNTVVLAQRYYEDSSYSQYPTDENKYQCRTGPFEGFFVSSVEFCKHIKFDDKNRKDIRE
Ga0310884_109799851	3300031944	Soil	MHKSALTFGFLASSLVMLVIMPFLNQNNSFFNVMAQEYDKYGDSSYSQIPTDDKKYECRTGPFEGFFVS
Ga0307416_1018699861	3300032002	Rhizosphere	MNKAVFTFGLLASSLVMLAILPFLNNNNNTVAMAQEYDKYRDSSYSQYPTDDKKYECRTGPF
Ga0307416_1023620061	3300032002	Rhizosphere	MHKSALTFGLLASSLVMLVIMPLQNHNSNFSNVMAQEYEKYGDSSYSTYQTDDKKYECRTGPFEGFFVSSVVVG
Ga0307416_1027950881	3300032002	Rhizosphere	MHKSVVTFVLLASSLVMLSAMIFLNNNNFSNTAMAQGYYGYDSNSNYYSQYPTDDKKYECRTGPF
Ga0307416_1030282591	3300032002	Rhizosphere	MKKSVYTFGLLASSLVMLSVMPLLNNNNITAMAQEYDKYGDSSYSKYPTDDKKYECRTGPFEGFFVSSVE
Ga0307416_1031041541	3300032002	Rhizosphere	MYKSVFTFGLLMSSLVMLTVMPILNQQQNNLLNPAMAQGYSDYGDSYYSQYPTDDKKYECRTGPF
Ga0310897_101550191	3300032003	Soil	ALTTFVLLASSLVMLVIMPFLNQQQNSFSNVMAQEYDKYGDNSYSQYPTDDKKYECRTGPFEGFL
Ga0307411_110786671	3300032005	Rhizosphere	MKKSVYTFGLLASSLVMLAVVPFLNNNNSFFTTTVMAQEYDNYYGDDNSYSKFPTDDKKYECRTGPFEGFFV
Ga0310902_111497111	3300032012	Soil	MHKSALTFGFLASSLVMLVIMPFLNQNNSFFNVMAQEYDKYGDSSYSQIPTDDKKYECRTGPFIL
Ga0310906_105083161	3300032013	Soil	MHKSGMFTFVLLASSLVMLAVMPFLNQNNTFTKIAMAQGYDNYGDNNYYSQYPTDDKKYECRTGPFEGFFVSSVEFCKHVKFDDKKRDGKVGPQ
Ga0310890_105910111	3300032075	Soil	MHKSRTTTTFVFLASTLVMLAVIPFLNNNAAMAQGYYDDSYSTYPTDDKKYECRTGPFEGFFVGSVEFCDAKHKFDDRKDHDRD
Ga0307415_1021355811	3300032126	Rhizosphere	MTSLVMFAVMPLLNNDNNNILSTALAQGYGYDNRGDSYYSQYPTDDKKYECRTGQFEG
Ga0364935_0194902_283_477	3300034151	Sediment	LFKNIVKKSLFTFGLLASSLVMLSVMPFLNNNSAMAQEYDKYGDSSYSQYPTDDKKYECRTGPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F031394

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences