Metagenome / Metatranscriptome Family F031445

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031445
Family Type	Metagenome / Metatranscriptome
Number of Sequences	182
Average Sequence Length	46 residues
Representative Sequence	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRR
Number of Associated Samples	126
Number of Associated Scaffolds	182

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.00 %
% of genes near scaffold ends (potentially truncated)	19.23 %
% of genes from short scaffolds (< 2000 bps)	76.92 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.473 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.681 % of family members)
Environment Ontology (ENVO)	Unclassified (26.374 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.95% β-sheet: 0.00% Coil/Unstructured: 52.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 182 Family Scaffolds
PF00582	Usp	32.42
PF04343	DUF488	3.85
PF07681	DoxX	3.85
PF02627	CMD	2.20
PF00923	TAL_FSA	2.20
PF08281	Sigma70_r4_2	1.65
PF00044	Gp_dh_N	1.10
PF13442	Cytochrome_CBB3	1.10
PF00072	Response_reg	0.55
PF01152	Bac_globin	0.55
PF00196	GerE	0.55
PF13847	Methyltransf_31	0.55
PF00793	DAHP_synth_1	0.55
PF07992	Pyr_redox_2	0.55
PF00676	E1_dh	0.55
PF02371	Transposase_20	0.55
PF00970	FAD_binding_6	0.55
PF13517	FG-GAP_3	0.55
PF08183	SpoV	0.55
PF07730	HisKA_3	0.55
PF13188	PAS_8	0.55
PF14759	Reductase_C	0.55
PF13185	GAF_2	0.55

COG ID	Name	Functional Category	% Frequency in 182 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	3.85
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	3.85
COG4270	Uncharacterized membrane protein	Function unknown [S]	3.85
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	2.20
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	2.20
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	2.20
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	1.10
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.55
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.55
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.55
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.55
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.55
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.55
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.55
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.47 %
Unclassified	root	N/A	22.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.47 %
Unclassified	root	N/A	22.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.47 %
Unclassified	root	N/A	22.53 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.84 %
Unclassified	root	N/A	22.53 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.84 %
Unclassified	root	N/A	22.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.16 %
Unclassified	root	N/A	22.53 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.20 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	31.87 %
Unclassified	root	N/A	22.53 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.55 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.87 %
Unclassified	root	N/A	22.53 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.65 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.87 %
Unclassified	root	N/A	22.53 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.65 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103993398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300000956\|JGI10216J12902_109256065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300000956\|JGI10216J12902_112464876	Not Available	726	Open in IMG/M
3300000956\|JGI10216J12902_116035632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1176	Open in IMG/M
3300003267\|soilL1_10164524	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300004114\|Ga0062593_100007925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4697	Open in IMG/M
3300004114\|Ga0062593_101400641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300004156\|Ga0062589_100845520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300004479\|Ga0062595_100059901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1803	Open in IMG/M
3300004479\|Ga0062595_100257438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300005093\|Ga0062594_102690634	Not Available	551	Open in IMG/M
3300005167\|Ga0066672_10453995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300005171\|Ga0066677_10291547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300005175\|Ga0066673_10006759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4691	Open in IMG/M
3300005181\|Ga0066678_10247545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1152	Open in IMG/M
3300005184\|Ga0066671_10246276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300005187\|Ga0066675_10591375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300005327\|Ga0070658_10042215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3682	Open in IMG/M
3300005344\|Ga0070661_100278390	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300005444\|Ga0070694_100334349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1169	Open in IMG/M
3300005454\|Ga0066687_10012534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	3328	Open in IMG/M
3300005458\|Ga0070681_11196761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	682	Open in IMG/M
3300005459\|Ga0068867_100394342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1166	Open in IMG/M
3300005529\|Ga0070741_10004558	All Organisms → cellular organisms → Bacteria	32199	Open in IMG/M
3300005540\|Ga0066697_10221526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300005540\|Ga0066697_10370698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300005545\|Ga0070695_100564484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300005555\|Ga0066692_10261468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1094	Open in IMG/M
3300005558\|Ga0066698_10515678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300005568\|Ga0066703_10660547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300005569\|Ga0066705_10160978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1385	Open in IMG/M
3300005575\|Ga0066702_10633455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300005598\|Ga0066706_10619882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300006755\|Ga0079222_10046243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1989	Open in IMG/M
3300006854\|Ga0075425_100411357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1558	Open in IMG/M
3300006876\|Ga0079217_11023138	Not Available	607	Open in IMG/M
3300009012\|Ga0066710_101836006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300009012\|Ga0066710_103053486	Not Available	650	Open in IMG/M
3300009100\|Ga0075418_11718298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300009100\|Ga0075418_12926972	Not Available	521	Open in IMG/M
3300009137\|Ga0066709_100308040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2155	Open in IMG/M
3300009174\|Ga0105241_10038319	All Organisms → cellular organisms → Bacteria	3613	Open in IMG/M
3300009789\|Ga0126307_10000656	All Organisms → cellular organisms → Bacteria	22510	Open in IMG/M
3300009789\|Ga0126307_11312907	Not Available	586	Open in IMG/M
3300009840\|Ga0126313_10225354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1447	Open in IMG/M
3300010036\|Ga0126305_10149945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1449	Open in IMG/M
3300010038\|Ga0126315_10419047	Not Available	844	Open in IMG/M
3300010039\|Ga0126309_10021645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2816	Open in IMG/M
3300010039\|Ga0126309_10023086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2745	Open in IMG/M
3300010039\|Ga0126309_10585359	Not Available	700	Open in IMG/M
3300010039\|Ga0126309_10637210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300010040\|Ga0126308_10181706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300010040\|Ga0126308_10935715	Not Available	605	Open in IMG/M
3300010041\|Ga0126312_10001447	All Organisms → cellular organisms → Bacteria	15565	Open in IMG/M
3300010041\|Ga0126312_11041656	Not Available	600	Open in IMG/M
3300010323\|Ga0134086_10201977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300010336\|Ga0134071_10630601	Not Available	563	Open in IMG/M
3300010337\|Ga0134062_10292311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300010403\|Ga0134123_11218565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300010999\|Ga0138505_100073166	Not Available	508	Open in IMG/M
3300011000\|Ga0138513_100015917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300011003\|Ga0138514_100001510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2905	Open in IMG/M
3300011003\|Ga0138514_100027528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1059	Open in IMG/M
3300012200\|Ga0137382_10434133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300012204\|Ga0137374_10022760	All Organisms → cellular organisms → Bacteria	7056	Open in IMG/M
3300012207\|Ga0137381_11756095	Not Available	510	Open in IMG/M
3300012212\|Ga0150985_100050288	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012937\|Ga0162653_100001949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1843	Open in IMG/M
3300012941\|Ga0162652_100020871	Not Available	914	Open in IMG/M
3300012975\|Ga0134110_10465427	Not Available	570	Open in IMG/M
3300014488\|Ga0182001_10671394	Not Available	511	Open in IMG/M
3300014497\|Ga0182008_10437348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300015371\|Ga0132258_10061731	All Organisms → cellular organisms → Bacteria	8642	Open in IMG/M
3300015371\|Ga0132258_10249415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4339	Open in IMG/M
3300015371\|Ga0132258_10441697	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300015371\|Ga0132258_10446459	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300015374\|Ga0132255_100273026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2423	Open in IMG/M
3300015374\|Ga0132255_101789722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	933	Open in IMG/M
3300015374\|Ga0132255_104204629	Not Available	611	Open in IMG/M
3300017997\|Ga0184610_1284060	Not Available	546	Open in IMG/M
3300018000\|Ga0184604_10124743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300018027\|Ga0184605_10107633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300018027\|Ga0184605_10244874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300018051\|Ga0184620_10004157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2954	Open in IMG/M
3300018051\|Ga0184620_10291677	Not Available	550	Open in IMG/M
3300018054\|Ga0184621_10033071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1663	Open in IMG/M
3300018054\|Ga0184621_10138355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300018061\|Ga0184619_10032966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2194	Open in IMG/M
3300018061\|Ga0184619_10040534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1999	Open in IMG/M
3300018061\|Ga0184619_10237528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300018061\|Ga0184619_10339235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300018066\|Ga0184617_1163137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300018071\|Ga0184618_10038233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1688	Open in IMG/M
3300018071\|Ga0184618_10145237	Not Available	966	Open in IMG/M
3300018072\|Ga0184635_10000926	All Organisms → cellular organisms → Bacteria	8023	Open in IMG/M
3300018072\|Ga0184635_10122783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300018072\|Ga0184635_10239386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300018073\|Ga0184624_10198795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300018073\|Ga0184624_10473489	Not Available	547	Open in IMG/M
3300018073\|Ga0184624_10493026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300018076\|Ga0184609_10330376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300018081\|Ga0184625_10058481	Not Available	1940	Open in IMG/M
3300018081\|Ga0184625_10171237	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300018081\|Ga0184625_10520687	Not Available	597	Open in IMG/M
3300018422\|Ga0190265_11130986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300018422\|Ga0190265_12566971	Not Available	607	Open in IMG/M
3300018431\|Ga0066655_11049066	Not Available	566	Open in IMG/M
3300018433\|Ga0066667_10424418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300018468\|Ga0066662_10406533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1199	Open in IMG/M
3300018482\|Ga0066669_12112074	Not Available	531	Open in IMG/M
3300019875\|Ga0193701_1019791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1372	Open in IMG/M
3300020082\|Ga0206353_10317175	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300021080\|Ga0210382_10046761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1690	Open in IMG/M
3300021080\|Ga0210382_10051087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1627	Open in IMG/M
3300021445\|Ga0182009_10313858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300022195\|Ga0222625_1339056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300022467\|Ga0224712_10689593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300022756\|Ga0222622_10005709	All Organisms → cellular organisms → Bacteria	5606	Open in IMG/M
3300022756\|Ga0222622_10142871	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300022756\|Ga0222622_10151992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1493	Open in IMG/M
3300022756\|Ga0222622_10325999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300022756\|Ga0222622_10464697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300022756\|Ga0222622_10657102	Not Available	760	Open in IMG/M
3300022756\|Ga0222622_10695006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300025321\|Ga0207656_10344600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300025901\|Ga0207688_10729983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300025912\|Ga0207707_10138651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2127	Open in IMG/M
3300025912\|Ga0207707_10277583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1452	Open in IMG/M
3300025917\|Ga0207660_11499545	Not Available	545	Open in IMG/M
3300025919\|Ga0207657_10000871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31861	Open in IMG/M
3300026089\|Ga0207648_10385911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1267	Open in IMG/M
3300026312\|Ga0209153_1003952	All Organisms → cellular organisms → Bacteria	4675	Open in IMG/M
3300026312\|Ga0209153_1004816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4224	Open in IMG/M
3300026322\|Ga0209687_1011910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2887	Open in IMG/M
3300026542\|Ga0209805_1104500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1350	Open in IMG/M
3300026550\|Ga0209474_10156090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1483	Open in IMG/M
3300027787\|Ga0209074_10068698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300028707\|Ga0307291_1011131	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300028711\|Ga0307293_10073786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1074	Open in IMG/M
3300028715\|Ga0307313_10069818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1048	Open in IMG/M
3300028715\|Ga0307313_10082205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300028716\|Ga0307311_10048971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300028719\|Ga0307301_10083397	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300028721\|Ga0307315_10270221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300028722\|Ga0307319_10002994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5172	Open in IMG/M
3300028722\|Ga0307319_10210725	Not Available	637	Open in IMG/M
3300028744\|Ga0307318_10019328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2195	Open in IMG/M
3300028754\|Ga0307297_10302024	Not Available	578	Open in IMG/M
3300028771\|Ga0307320_10111210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1046	Open in IMG/M
3300028771\|Ga0307320_10410676	Not Available	544	Open in IMG/M
3300028771\|Ga0307320_10482316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300028787\|Ga0307323_10088230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300028787\|Ga0307323_10106453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300028787\|Ga0307323_10174730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300028790\|Ga0307283_10003951	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300028793\|Ga0307299_10248207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300028793\|Ga0307299_10329831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300028796\|Ga0307287_10380337	Not Available	532	Open in IMG/M
3300028811\|Ga0307292_10135651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300028824\|Ga0307310_10722160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300028828\|Ga0307312_10690515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300028875\|Ga0307289_10143444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	981	Open in IMG/M
3300028876\|Ga0307286_10413599	Not Available	507	Open in IMG/M
3300028878\|Ga0307278_10000125	All Organisms → cellular organisms → Bacteria	37780	Open in IMG/M
3300028878\|Ga0307278_10010275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4387	Open in IMG/M
3300028878\|Ga0307278_10012986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3882	Open in IMG/M
3300028878\|Ga0307278_10210162	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300028881\|Ga0307277_10003354	All Organisms → cellular organisms → Bacteria	6161	Open in IMG/M
3300031731\|Ga0307405_11320754	Not Available	628	Open in IMG/M
3300031911\|Ga0307412_11390463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300031995\|Ga0307409_100521194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300031996\|Ga0308176_10583719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1146	Open in IMG/M
3300032002\|Ga0307416_101173627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	873	Open in IMG/M
3300032005\|Ga0307411_11045914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300032126\|Ga0307415_100214027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.52%
Host-Associated	Host-Associated	16.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.29%
Aquatic	Environmental → Aquatic	19.23%
Plants	Host-Associated → Plants	16.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.99%
Sediment	Environmental → Aquatic → Sediment	17.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.69%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	3.30%
Freshwater	Environmental → Aquatic → Freshwater	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	17.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.04%
Loam	Environmental → Terrestrial → Soil → Loam	5.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.40%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	3.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	17.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.40%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	3.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.10%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	13.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.09%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.30%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	3.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.30%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.20%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.10%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.55%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.55%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1039933981	3300000956	Soil	MEALETYTFALAALSAALLLLAPGLAKKQLVWKRAKPVPPRPRR*
JGI10216J12902_1092560652	3300000956	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRWF*
JGI10216J12902_1124648761	3300000956	Soil	MEALETYTSALAVLSAALLLVVAGLAKKQLVWKRAKAVPARRRRRRF*
JGI10216J12902_1160356321	3300000956	Soil	MDSLETYTPALAALSAALLLIASGLVKKQLVWKRPTPVRARHRRRRS*
soilL1_101645242	3300003267	Sugarcane Root And Bulk Soil	MEALETYTSAVSVLSAALLLVAAGLAKKQLVWKRPKPVPARRRRRKR*
Ga0062593_1000079259	3300004114	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPVPTGRRRCRR*
Ga0062593_1014006412	3300004114	Soil	MEALDTYTSVLTVLSAALLLAAAELAKKQLVRKLAKPVRARRRRGS*
Ga0062589_1008455202	3300004156	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRSR*
Ga0062595_1000599012	3300004479	Soil	MEAVETYSSVLAVLSAALLLVAAGLAKKQLVWKRPKAVPARRRRRWF*
Ga0062595_1002574382	3300004479	Soil	MEALDTYTSVVVVLSAALLLIAAGLAKKQLVWKRAKPVPARRRRNR*
Ga0062594_1026906341	3300005093	Soil	MEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRRRRCRR*
Ga0066672_104539952	3300005167	Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRRNR*
Ga0066677_102915472	3300005171	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRSS*
Ga0066673_100067592	3300005175	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWRRAKPVPARRRRRRF*
Ga0066678_102475451	3300005181	Soil	MLETYTSALAALSAALLLIASGLVKKQLVWKRPTPLRARYR
Ga0066671_102462762	3300005184	Soil	MEALETYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVLARRRRRSF*
Ga0066675_105913753	3300005187	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRR
Ga0070658_100422152	3300005327	Corn Rhizosphere	MEAYETYTSVLVALSVALLLIASGLAKKQLVWKRSRPSRGHRRRS*
Ga0070658_100902842	3300005327	Corn Rhizosphere	MELHETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG*
Ga0070683_1018302852	3300005329	Corn Rhizosphere	HETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG*
Ga0070691_103384141	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MELHETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRR
Ga0070661_1002783903	3300005344	Corn Rhizosphere	MEAYETYTSVLVALSIALLLIASGLAKKQLVWKRSRPSRGHRRRS*
Ga0070694_1003343491	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRR
Ga0066687_100125347	3300005454	Soil	MAALETYTSALAVRSAALLLIAAGLAKKQLVWKRAKPVLARRRRRSF*
Ga0070681_111967611	3300005458	Corn Rhizosphere	MEAYETYTSVLVALSVALLLIASGLAKKQLVWKRSRPSRGRRRRS*
Ga0068867_1003943421	3300005459	Miscanthus Rhizosphere	MEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPLRRRRCRR*
Ga0070741_1000455820	3300005529	Surface Soil	MEALETYTSALAVLSAALLLVATGLAKKQLVWKRAKAVSARRRRSNR*
Ga0066697_102215263	3300005540	Soil	MLETYTSALAALSAALLLIASGLVKKQLVWKRPTPLRARYRRRRS*
Ga0066697_103706981	3300005540	Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRRN
Ga0070695_1005644841	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GALMEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRRRRCRR*
Ga0066692_102614682	3300005555	Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRATPVPARRRRNR*
Ga0066698_105156782	3300005558	Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRSNR*
Ga0068855_1000482171	3300005563	Corn Rhizosphere	MELHETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRR
Ga0068855_1000808128	3300005563	Corn Rhizosphere	ETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG*
Ga0066703_106605471	3300005568	Soil	MEALETYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRGRSS*
Ga0066705_101609782	3300005569	Soil	MEALETYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRRRSS*
Ga0066702_106334552	3300005575	Soil	MEALETYTSALAVVSAALLLVAAGLAKKQLVWKRAKPVPARRRRRSS*
Ga0066706_106198823	3300005598	Soil	MEALEIYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRSS*
Ga0079222_100462432	3300006755	Agricultural Soil	MEALETYTSAVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRRRRCRR*
Ga0075425_1004113574	3300006854	Populus Rhizosphere	MEALETYTSVLAVLSAALLLIAAGLAKKQLVWRRPKPVPVRRRRGRR*
Ga0079217_110231382	3300006876	Agricultural Soil	VEAVETYTSVLTVLSVAVLLVVAGLAKKQLVWKAKAVPTRRRRRR*
Ga0066710_1018360063	3300009012	Grasslands Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRR
Ga0066710_1030534861	3300009012	Grasslands Soil	MDSLETYTSALAALSAALLLIASGLAKKQLVWKRPTPLRARYRRRRS
Ga0075418_117182982	3300009100	Populus Rhizosphere	MEALETYTSTVAVLSAALLLVAAGLAKKQLAWKQARPVPAPRRRCRR*
Ga0075418_129269721	3300009100	Populus Rhizosphere	MEALETYTSTLAVLSAALLLVAAGLAKKQLVWKRAKPDPARRRRRSS*
Ga0066709_1003080402	3300009137	Grasslands Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRPKPVPARRRRNR*
Ga0105241_100383192	3300009174	Corn Rhizosphere	MEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPARRRRCRR*
Ga0126307_1000065616	3300009789	Serpentine Soil	MEALETYTSVLAMLSAALLLVAAGLAKKQLVWKVKPLPMRKRRRRS*
Ga0126307_113129072	3300009789	Serpentine Soil	MEALETYTSALTVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRRF*
Ga0126313_102253543	3300009840	Serpentine Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRVKPLPARRRRRKP*
Ga0126305_101499454	3300010036	Serpentine Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRPKPVPARRRRRSS*
Ga0126315_104190472	3300010038	Serpentine Soil	MEALETYTSALVVLSAALLLVAAGLAKKQLVWRRAKPVRARRRRNRF*
Ga0126309_100216452	3300010039	Serpentine Soil	MESFETYASALTAISVALLLVAAGLAKKQLVWKRVKPRPRRRRRR*
Ga0126309_100230864	3300010039	Serpentine Soil	MEALEIYTSALAVLSAALLLVAAGLAKKQLVWKRVKRSPARRHRREP*
Ga0126309_105853592	3300010039	Serpentine Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKQAKPVPARRRRCRR*
Ga0126309_106372102	3300010039	Serpentine Soil	MEALETYTSILTLLSAALLLVAAGLAKKQLVWKTKPLPMWKRRRRS*
Ga0126308_101817062	3300010040	Serpentine Soil	MEALTYTSALVVLSAALLLVAAGLAKKQLVWRRAKPVRAQRRRNRF*
Ga0126308_109357152	3300010040	Serpentine Soil	MEALETYTSTLAVLSAALLLVAAGLAKKQLVWKRAKPAPARRRRRRS*
Ga0126312_100014479	3300010041	Serpentine Soil	MEALETYTSTLAVLSAALLLVAARLAKKQLVWKRAKPAPARRRRRRS*
Ga0126312_110416562	3300010041	Serpentine Soil	MEALETYTSVLALLSAALLLVAAGLAKKQLVWKAKPVPMRRRRRRS*
Ga0134086_102019771	3300010323	Grasslands Soil	MDSLETYTSALAALSAAFLLIASGLVKKQLVWKRPTPLRARYRRRRS*
Ga0134071_106306012	3300010336	Grasslands Soil	MDSLETYTSALAALSAAFLLIASGLVKKQLVWKRPTPLRA
Ga0134062_102923111	3300010337	Grasslands Soil	GAQMEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRSS*
Ga0134123_112185652	3300010403	Terrestrial Soil	MEALKTYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRRRRCRR*
Ga0138505_1000731662	3300010999	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRCRR*
Ga0138513_1000159171	3300011000	Soil	QGGAQMEALETYTSALAVLSAALLLVAAGLANKQLVWKRGKPVPARRRRRGF*
Ga0138514_1000015104	3300011003	Soil	MEALETYTSALAVLSAALFLVAAGLAKKQLVWKRAKPVPARRRRRRSF*
Ga0138514_1000275283	3300011003	Soil	MEALETYTSALAVLSAALLLVAAGLVKKQLVWKRVKPLPARRRRPKP*
Ga0137382_104341331	3300012200	Vadose Zone Soil	MEALEAYTSALAVLSAALLLIVAGLAKKQLVWKRAKPVPARRRRNR*
Ga0137374_1002276014	3300012204	Vadose Zone Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRSF*
Ga0137381_117560951	3300012207	Vadose Zone Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRCNR*
Ga0150985_1000502881	3300012212	Avena Fatua Rhizosphere	PMESFETYTSVLAALSATLLMIAAGFAKKQLVWRRPARTRANSRRRQW*
Ga0162653_1000019493	3300012937	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRGF*
Ga0162652_1000208711	3300012941	Soil	TRRCKMEALETYTSTLAVLSAALLLVAAGLAKKQLVSKRAKPVPARRRRRSP*
Ga0134110_104654272	3300012975	Grasslands Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWRRTKPVPARRRRRRF*
Ga0182001_106713942	3300014488	Soil	LDAVDSYTSVLATLTAALLLVAAGLAKKQLVWKAKPIWLRRRRRRR*
Ga0182008_104373481	3300014497	Rhizosphere	MEALETYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRRSF*
Ga0132258_1006173115	3300015371	Arabidopsis Rhizosphere	MEALDAYTSAFAVLSAALLLVAARVAKKPLVPVRVKRVAPRLRRRTS*
Ga0132258_102494159	3300015371	Arabidopsis Rhizosphere	MEALDAYTSAFAVLSAALLLVAAQVAKKPLVPVRVKRVAPRLRRRTS*
Ga0132258_104416973	3300015371	Arabidopsis Rhizosphere	VKTLELYVSALTVLSAALLFVAAGLAKKQLVWKRVSPVPVCLRRRRS*
Ga0132258_104464594	3300015371	Arabidopsis Rhizosphere	MEALDPYTSAVAVLSAVLLMITAGLAKRQLVWRAKPVRARRRLRRHSGGRLR*
Ga0132255_1002730263	3300015374	Arabidopsis Rhizosphere	MEALETYTSVLAVLSAALLLIAAGLAKKQLVWRRPKPVPVWRRRGRR*
Ga0132255_1017897222	3300015374	Arabidopsis Rhizosphere	MEAFDSYTSAVAVISAALLMITAGLAKKQLVWKRASPVRPRCRRRRS*
Ga0132255_1042046291	3300015374	Arabidopsis Rhizosphere	PYTSVVALLCLALLLVTAGLGKKQLVWKARRSPMSMRRRRRRS*
Ga0184610_12840602	3300017997	Groundwater Sediment	MEALETYTSALTVLSAALLLVAAGLAKKQLVWKRAKPAPARRRRSS
Ga0184604_101247432	3300018000	Groundwater Sediment	MEALETYTSALTVLSAALLLVAAGLAKKQLVWKRAKPAPARRRCSH
Ga0184605_101076333	3300018027	Groundwater Sediment	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRRNR
Ga0184605_102448741	3300018027	Groundwater Sediment	MEALETYTSALAVLSAALLLVAAGFAKKQLVWKRAKPVPARRRRRSF
Ga0184620_100041571	3300018051	Groundwater Sediment	MEVLETYTSALAVLSAALLLIVAGLAKKQLVWKRAKPISKRRRRSS
Ga0184620_102916772	3300018051	Groundwater Sediment	MEALEIYTSALAVISAALLLVVAGLAKKQLVWNRAKPIPVRRRRRRR
Ga0184621_100330715	3300018054	Groundwater Sediment	MEALETYTSALAVLSAALLLVVAGLAKKQLVWRREKPVSKRRRRSS
Ga0184621_101383552	3300018054	Groundwater Sediment	MEALETYTSALAVLSAALLLVAAGLAKKQLVWRQKPVSKRRRRSY
Ga0184619_100329663	3300018061	Groundwater Sediment	MEALDTYTSALAVLSAALLLVAAGLAKKQLVWRQKPVSKRRRRSY
Ga0184619_100405343	3300018061	Groundwater Sediment	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRSF
Ga0184619_102375281	3300018061	Groundwater Sediment	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPA
Ga0184619_103392351	3300018061	Groundwater Sediment	MLETYTSALAALSAALLLIASGLVKKQLVWKRPTPLRARYRRRRS
Ga0184617_11631372	3300018066	Groundwater Sediment	MEVLEAYTSALAVLSAALLLVAAGLAKKQLVWRQKPVSKRRRRSY
Ga0184618_100382332	3300018071	Groundwater Sediment	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRCRRRF
Ga0184618_101452372	3300018071	Groundwater Sediment	MEVLDTYTSVLAVLIGALLLVAAGLAKKQLVWKRPNPVRVRWRRRSS
Ga0184635_100009266	3300018072	Groundwater Sediment	MEALETYTSTLAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRQSP
Ga0184635_101227832	3300018072	Groundwater Sediment	MEALDSYTSAVAVLSAALLMITAGLAKQQLVWKRPKLVRARRRRRRY
Ga0184635_102393862	3300018072	Groundwater Sediment	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPIPVRRRRR
Ga0184624_101987951	3300018073	Groundwater Sediment	MEALDSYTSAAAVLSAALLMITAGLAKKQLVWKRAKPVRARRRRRRS
Ga0184624_104734892	3300018073	Groundwater Sediment	MEALDSYTSAVAVLSAALLMITAGLAKQQLVWKRPKPVRARRRRRRY
Ga0184624_104930262	3300018073	Groundwater Sediment	MEALEAYTSAPAVLSAVLLLVVAGLAKKQLVWNRAKPIPVRRRRRRR
Ga0184609_103303762	3300018076	Groundwater Sediment	MEALETYTSALTVLSAALLLIVAGLAKKQLVWKRAEPVSKRRRRSS
Ga0184625_100584812	3300018081	Groundwater Sediment	MEALEAYTSTLAVLSATLLLVVTGLAKKQLVWKRPKPVPARRRRRRF
Ga0184625_101712372	3300018081	Groundwater Sediment	MEALDSYTSAVAVLSAVLLMITAGLAKQQLVWKRPKLVRARRRRRRY
Ga0184625_105206872	3300018081	Groundwater Sediment	MEALETYTSALAVLSAALLLVVAGLAKKQLVWKRAKPVSKRRRRRS
Ga0190265_111309861	3300018422	Soil	KEVHVEAVETYTSVLTVLSVALLLVVAGMAKKQLVWKAKPSPARRRRPRT
Ga0190265_125669711	3300018422	Soil	MEALETYTSALAVVSAALLLVAAGVAKKQLVWKRAKPVPARRRRRRS
Ga0066655_110490662	3300018431	Grasslands Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWRRAKPVPARRRRRRF
Ga0066667_104244182	3300018433	Grasslands Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRSS
Ga0066662_104065333	3300018468	Grasslands Soil	MEALETYTLALAVRSAALLLIAAGLAKKQLVWKRAKPVLARRRRRSF
Ga0066669_121120741	3300018482	Grasslands Soil	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPAWLRRNR
Ga0193701_10197912	3300019875	Soil	MEALETYTSALAVISTALLLVAAGLAKKQLVWKRAKPVPVRRRRCRR
Ga0206353_103171754	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	RGGEMELHETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG
Ga0210382_100467611	3300021080	Groundwater Sediment	SQGGALMEALETYTSAVAVLSAALLLVAAGLAKKQLVWKQAKPVPARRRRCRR
Ga0210382_100510873	3300021080	Groundwater Sediment	MEALEAYTSALAVLSAALLLIAAGLAKKQLVWKRAKPAPARRRRKR
Ga0182009_103138582	3300021445	Soil	MEALETYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVPARRRRSF
Ga0222625_13390562	3300022195	Groundwater Sediment	MEALETYTSVLALLSGALLLVAAGLVKKQLVWKAKRVRVPTRRHCP
Ga0224712_106895932	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LHETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG
Ga0222622_100057096	3300022756	Groundwater Sediment	MEALETYTSAVAVLSAAVLLIAAGLAKKRLVWKPARPVRARRRRRRS
Ga0222622_101428713	3300022756	Groundwater Sediment	MEALDSYTSAVAVLSAALLMITAGLAKQQLVWKRPKPVRARRRRPRS
Ga0222622_101519923	3300022756	Groundwater Sediment	MEALETYTSALAVISAALLLVAAGLAKKQLVWKRAKPVPARRRRCRR
Ga0222622_103259993	3300022756	Groundwater Sediment	MEALETYTSALAVISTALLLVAAGLAKKQLVWKRAKPVPV
Ga0222622_104646972	3300022756	Groundwater Sediment	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPIPVRRRRRRR
Ga0222622_106571021	3300022756	Groundwater Sediment	MLETYTSILVALTAALLLIASGLAKKQLVWKRPTRLRARYRRHRW
Ga0222622_106950062	3300022756	Groundwater Sediment	MEALETYTSAVAVLSAALLLIAAGLARKQLVWKRVKPLPARRRRRKP
Ga0207656_103446001	3300025321	Corn Rhizosphere	HETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG
Ga0207688_107299832	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MEALETYTSAVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRRRRCRR
Ga0207707_101386513	3300025912	Corn Rhizosphere	MEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRRRRCRR
Ga0207707_102775831	3300025912	Corn Rhizosphere	MEAYETYTSVLVALSVALLLIASGLAKKQLVWKRSRPSRGRRRRS
Ga0207660_114995451	3300025917	Corn Rhizosphere	MEALDTYTSVLTVLSAALLLAAAELAKKQLVRKLAKPVRARRRRGS
Ga0207657_1000087134	3300025919	Corn Rhizosphere	MEAYETYTSVLVALSVALLLIASGLAKKQLVWKRSRPSRGHRRRS
Ga0207648_103859112	3300026089	Miscanthus Rhizosphere	MEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPLRRRRCRR
Ga0209153_10039529	3300026312	Soil	MEALETYTSALAVLSAALLLIAAGLAKKQLVWKRAKPVLARRRRRSF
Ga0209153_10048161	3300026312	Soil	GAQMEALETYTSALAVRSAALLLIAAGLAKKQLVWKRAKPVLARRRRRSF
Ga0209687_10119101	3300026322	Soil	ALETYTSALAVRSAALLLIAAGLAKKQLVWKRAKPVLARRRRRSF
Ga0209805_11045003	3300026542	Soil	MEALETYTSALAVRSAALLLIAAGLAKKQLVWKRAKPVLARRRRRSF
Ga0209474_101560903	3300026550	Soil	MEALETYTSALAVVSAALLLVAAGLAKKQLVWKRAKPVLARRRRRSF
Ga0209074_100686981	3300027787	Agricultural Soil	GGALMEALETYTSVVAVLGAALLLVAAGLAKKQLVWKRRRPAPVRRRRCRR
Ga0268266_100904164	3300028379	Switchgrass Rhizosphere	MELHETYTSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG
Ga0307291_10111311	3300028707	Soil	MEALETYTSALAVLSAALLLVAAGFAKKQLVWKRAKPVPARRRRCKR
Ga0307293_100737861	3300028711	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRC
Ga0307313_100698181	3300028715	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRWRR
Ga0307313_100822052	3300028715	Soil	MEALEAYTSALAVLSAVLLLVAAGLAKKQLVWKRPKPFPARRRRRKP
Ga0307311_100489713	3300028716	Soil	MEALETYTSALTVLSAALLLVAAGLAKKQLVWKRPKPAPARRPRNR
Ga0307301_100833972	3300028719	Soil	MEALETYTPALTALSAALLLVAAGLAKKQLIWKRAKPVPVRRRRRSS
Ga0307315_102702211	3300028721	Soil	LETYTSALAVISAALLLVAAGLAKKQLVWKRAKPVPARRRRCRR
Ga0307319_100029945	3300028722	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRCRR
Ga0307319_102107252	3300028722	Soil	MENIETYTSVLVVLSAAILLVTGGLAKHQLVWKRRTPVTVRL
Ga0307318_100193281	3300028744	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKQAKPVPARRRRCRR
Ga0307297_103020242	3300028754	Soil	ETYTSAVAVLSAAVLLIAAGLAKKRLVWRPARPVRARRCRRRS
Ga0307320_101112102	3300028771	Soil	MEALETYTSTLAVLSAALLLVAAGLAKRQLVWKRAKPVPARRRRQSP
Ga0307320_104106761	3300028771	Soil	MENLETYTSVLVVLSAAILLVTGGLAKKQLVWKRRTPVT
Ga0307320_104823161	3300028771	Soil	MEALETYTSALTVLSAALLLVAAGLAKKQLVWKRAKRAPARRRRSP
Ga0307323_100882301	3300028787	Soil	MEALETYTSALAVISTALLLVAAGLAKKQLVWKRAKPVPARRRRCRR
Ga0307323_101064532	3300028787	Soil	MEALETYTSALAVISAALLLVAAGLAKKQLVWKRAKPVPARRRRWKR
Ga0307323_101747301	3300028787	Soil	MEALETYTSAVAVLSAALLLIAAGLARKQLVWKRVKPLPARRRRRKS
Ga0307283_100039516	3300028790	Soil	MEALETYTSALAVISTALLLVAAGLAKKQLVWKRAKPVPVRRRR
Ga0307299_102482072	3300028793	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWRREKPVSKRRRRSS
Ga0307299_103298311	3300028793	Soil	SQGGAQMEALDTYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRCKR
Ga0307287_103803371	3300028796	Soil	MENIETYTSVLVVLSAAILLVTGGLAKHQLVWKRRTPVTVRLHRRRSR
Ga0307292_101356513	3300028811	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKQA
Ga0307310_107221601	3300028824	Soil	MEALETYTSALTVLSAALLLVAAGLAKKQHVWKRAKPAPARRR
Ga0307312_106905151	3300028828	Soil	MEAFEAYTSALTVLSAALLLVAAGLAKKQLVWKRAKPAPARRRRSS
Ga0307289_101434441	3300028875	Soil	MLETYTSILVALTAALLLIASGLAKKQLVWKRAKPCPARRRHRRKP
Ga0307286_104135992	3300028876	Soil	MEALETYTSAVAVLSAAMLLIAAGLAKKRLVWKPAWPVRARRRRRRS
Ga0307278_1000012523	3300028878	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRCS
Ga0307278_100102757	3300028878	Soil	MEALETYTSALAVLSAALLLVAAGLGKKQLVWKRATPVPARRRRRSS
Ga0307278_100129864	3300028878	Soil	MEALETYTSALAVLSAALLLVAAGLAKKQLVWKRAKPVPARRRRRRNF
Ga0307278_102101622	3300028878	Soil	MLETYTSILVALSAALLLIASGLAKKQLVWKRPTRLRARYRRHRW
Ga0307277_100033548	3300028881	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRTKPVPVRRRRCRR
Ga0307405_113207542	3300031731	Rhizosphere	MEALETYTSVLALLSAALLLVVAGLATKQLVWKAKPVPMRTRRRRP
Ga0307412_113904631	3300031911	Rhizosphere	MEALETYTSALVVLSAALLLVAAGLAKKQLVWRRAKPVRARRRRNRF
Ga0307409_1005211942	3300031995	Rhizosphere	MEALTYTSALVVLSAALLLVAAGLAKKQLVWRRAKPVRAQRRRNRF
Ga0308176_105837193	3300031996	Soil	MEALETYTSAVAVLSAALLLVAAGLAKKQLVWKRPKPAPGRRRRRKR
Ga0308176_112361821	3300031996	Soil	MELHETYLSVLTSLSVGLLLIAAGLAKKQLVWKRPRPLPVRRRRRNG
Ga0307416_1011736273	3300032002	Rhizosphere	VEAVETYTSVLTVLSVAVLLVVLGLAKKQLVWKAKPVPMRRRRRR
Ga0307411_110459141	3300032005	Rhizosphere	GGAQMEALETYVSALTALSAALLLIAAGLAKKQLVWRRPKPVSARKRRRRR
Ga0307415_1002140273	3300032126	Rhizosphere	MEALETYTSVLALLSAALLLVAAGLAKKQLVWKAKPVPMRRRRRRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031445

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences