Basic Information | |
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Family ID | F031559 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 182 |
Average Sequence Length | 56 residues |
Representative Sequence | MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHTPFGKSEARAEAAKWLCVV |
Number of Associated Samples | 119 |
Number of Associated Scaffolds | 182 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 79.67 % |
% of genes near scaffold ends (potentially truncated) | 23.63 % |
% of genes from short scaffolds (< 2000 bps) | 84.07 % |
Associated GOLD sequencing projects | 110 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.29 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (59.341 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.681 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.868 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (41.758 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 39.29% β-sheet: 0.00% Coil/Unstructured: 60.71% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.29 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 182 Family Scaffolds |
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PF04773 | FecR | 2.75 |
PF13467 | RHH_4 | 2.75 |
PF04392 | ABC_sub_bind | 2.20 |
PF03401 | TctC | 1.10 |
PF00839 | Cys_rich_FGFR | 1.10 |
PF13430 | DUF4112 | 1.10 |
PF00313 | CSD | 1.10 |
PF04909 | Amidohydro_2 | 1.10 |
PF00574 | CLP_protease | 1.10 |
PF04014 | MazE_antitoxin | 1.10 |
PF13458 | Peripla_BP_6 | 0.55 |
PF13783 | DUF4177 | 0.55 |
PF01364 | Peptidase_C25 | 0.55 |
PF04226 | Transgly_assoc | 0.55 |
PF07080 | DUF1348 | 0.55 |
PF00589 | Phage_integrase | 0.55 |
PF09361 | Phasin_2 | 0.55 |
PF06823 | DUF1236 | 0.55 |
PF11604 | CusF_Ec | 0.55 |
PF00690 | Cation_ATPase_N | 0.55 |
PF03330 | DPBB_1 | 0.55 |
PF13185 | GAF_2 | 0.55 |
PF03734 | YkuD | 0.55 |
PF00561 | Abhydrolase_1 | 0.55 |
COG ID | Name | Functional Category | % Frequency in 182 Family Scaffolds |
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COG0616 | Periplasmic serine protease, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 2.20 |
COG0740 | ATP-dependent protease ClpP, protease subunit | Posttranslational modification, protein turnover, chaperones [O] | 2.20 |
COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 2.20 |
COG1030 | Membrane-bound serine protease NfeD, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 1.10 |
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 1.10 |
COG0474 | Magnesium-transporting ATPase (P-type) | Inorganic ion transport and metabolism [P] | 0.55 |
COG1376 | Lipoprotein-anchoring transpeptidase ErfK/SrfK | Cell wall/membrane/envelope biogenesis [M] | 0.55 |
COG2261 | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family | General function prediction only [R] | 0.55 |
COG3034 | Murein L,D-transpeptidase YafK | Cell wall/membrane/envelope biogenesis [M] | 0.55 |
COG3558 | Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily | Function unknown [S] | 0.55 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 59.34 % |
All Organisms | root | All Organisms | 40.66 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
2040502001|FACENC_GAMC6GA01AVRGH | Not Available | 518 | Open in IMG/M |
2088090015|GPICI_8731729 | Not Available | 1885 | Open in IMG/M |
2189573002|GZIGXIF01BVASC | Not Available | 537 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101634747 | Not Available | 1136 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101636551 | Not Available | 819 | Open in IMG/M |
3300000559|F14TC_103005859 | Not Available | 799 | Open in IMG/M |
3300000580|AF_2010_repII_A01DRAFT_1000777 | Not Available | 4909 | Open in IMG/M |
3300000580|AF_2010_repII_A01DRAFT_1043011 | Not Available | 698 | Open in IMG/M |
3300000597|AF_2010_repII_A1DRAFT_10037007 | Not Available | 1302 | Open in IMG/M |
3300000754|JGI11851J11668_1002732 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 722 | Open in IMG/M |
3300000793|AF_2010_repII_A001DRAFT_10006760 | Not Available | 2697 | Open in IMG/M |
3300000816|AF_2010_repII_A10DRAFT_1008659 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1064 | Open in IMG/M |
3300000816|AF_2010_repII_A10DRAFT_1018939 | Not Available | 726 | Open in IMG/M |
3300001431|F14TB_101740155 | Not Available | 1276 | Open in IMG/M |
3300003911|JGI25405J52794_10110302 | Not Available | 617 | Open in IMG/M |
3300003998|Ga0055472_10050023 | Not Available | 1052 | Open in IMG/M |
3300004024|Ga0055436_10146019 | Not Available | 719 | Open in IMG/M |
3300004025|Ga0055433_10070867 | All Organisms → cellular organisms → Bacteria | 746 | Open in IMG/M |
3300004463|Ga0063356_100618853 | All Organisms → cellular organisms → Bacteria | 1468 | Open in IMG/M |
3300004479|Ga0062595_100373343 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1006 | Open in IMG/M |
3300004479|Ga0062595_100855070 | Not Available | 759 | Open in IMG/M |
3300004479|Ga0062595_101338120 | Not Available | 648 | Open in IMG/M |
3300005289|Ga0065704_10413143 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 739 | Open in IMG/M |
3300005294|Ga0065705_10173256 | Not Available | 1653 | Open in IMG/M |
3300005332|Ga0066388_100073560 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3740 | Open in IMG/M |
3300005332|Ga0066388_100246729 | Not Available | 2423 | Open in IMG/M |
3300005332|Ga0066388_100368646 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2083 | Open in IMG/M |
3300005332|Ga0066388_100373585 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2072 | Open in IMG/M |
3300005332|Ga0066388_100471078 | All Organisms → cellular organisms → Bacteria | 1895 | Open in IMG/M |
3300005332|Ga0066388_101160465 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter cathodiphilus | 1315 | Open in IMG/M |
3300005332|Ga0066388_101650001 | Not Available | 1131 | Open in IMG/M |
3300005332|Ga0066388_102076735 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1021 | Open in IMG/M |
3300005332|Ga0066388_102132736 | Not Available | 1009 | Open in IMG/M |
3300005332|Ga0066388_102803702 | Not Available | 890 | Open in IMG/M |
3300005332|Ga0066388_103267108 | Not Available | 828 | Open in IMG/M |
3300005332|Ga0066388_108460093 | Not Available | 512 | Open in IMG/M |
3300005354|Ga0070675_100740058 | All Organisms → cellular organisms → Bacteria | 897 | Open in IMG/M |
3300005439|Ga0070711_100598234 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 920 | Open in IMG/M |
3300005713|Ga0066905_100148028 | Not Available | 1686 | Open in IMG/M |
3300005713|Ga0066905_100346998 | All Organisms → cellular organisms → Bacteria | 1184 | Open in IMG/M |
3300005713|Ga0066905_100412318 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069 | 1099 | Open in IMG/M |
3300005713|Ga0066905_100450919 | Not Available | 1057 | Open in IMG/M |
3300005713|Ga0066905_100532780 | Not Available | 982 | Open in IMG/M |
3300005713|Ga0066905_100629971 | Not Available | 912 | Open in IMG/M |
3300005713|Ga0066905_100714144 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis | 861 | Open in IMG/M |
3300005764|Ga0066903_103222195 | Not Available | 882 | Open in IMG/M |
3300005764|Ga0066903_105216845 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 687 | Open in IMG/M |
3300005764|Ga0066903_108126242 | Not Available | 537 | Open in IMG/M |
3300005764|Ga0066903_108231625 | Not Available | 533 | Open in IMG/M |
3300005937|Ga0081455_10002933 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 19997 | Open in IMG/M |
3300005937|Ga0081455_10023558 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 5727 | Open in IMG/M |
3300005937|Ga0081455_10023991 | All Organisms → cellular organisms → Bacteria | 5661 | Open in IMG/M |
3300005937|Ga0081455_10249795 | Not Available | 1298 | Open in IMG/M |
3300005937|Ga0081455_10646313 | Not Available | 682 | Open in IMG/M |
3300005983|Ga0081540_1321696 | Not Available | 530 | Open in IMG/M |
3300006049|Ga0075417_10000762 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 7907 | Open in IMG/M |
3300006049|Ga0075417_10001786 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6151 | Open in IMG/M |
3300006049|Ga0075417_10148754 | Not Available | 1088 | Open in IMG/M |
3300006050|Ga0075028_100682387 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 617 | Open in IMG/M |
3300006058|Ga0075432_10020212 | Not Available | 2277 | Open in IMG/M |
3300006194|Ga0075427_10004911 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1892 | Open in IMG/M |
3300006196|Ga0075422_10098350 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1121 | Open in IMG/M |
3300006844|Ga0075428_100054049 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis | 4400 | Open in IMG/M |
3300006844|Ga0075428_101561824 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 690 | Open in IMG/M |
3300006846|Ga0075430_100081682 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis | 2708 | Open in IMG/M |
3300006846|Ga0075430_100430918 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1088 | Open in IMG/M |
3300006847|Ga0075431_100687351 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis | 1001 | Open in IMG/M |
3300006852|Ga0075433_10156366 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2028 | Open in IMG/M |
3300006852|Ga0075433_10915842 | Not Available | 764 | Open in IMG/M |
3300006852|Ga0075433_11313277 | Not Available | 627 | Open in IMG/M |
3300006854|Ga0075425_100203719 | Not Available | 2274 | Open in IMG/M |
3300006854|Ga0075425_100523100 | Not Available | 1366 | Open in IMG/M |
3300006854|Ga0075425_100689244 | Not Available | 1173 | Open in IMG/M |
3300006871|Ga0075434_100745229 | Not Available | 997 | Open in IMG/M |
3300006904|Ga0075424_102493592 | Not Available | 542 | Open in IMG/M |
3300006914|Ga0075436_100093445 | All Organisms → cellular organisms → Bacteria | 2091 | Open in IMG/M |
3300006969|Ga0075419_10239267 | Not Available | 1211 | Open in IMG/M |
3300007076|Ga0075435_100216224 | Not Available | 1627 | Open in IMG/M |
3300007076|Ga0075435_101301237 | Not Available | 637 | Open in IMG/M |
3300009100|Ga0075418_11562757 | Not Available | 716 | Open in IMG/M |
3300009100|Ga0075418_12640034 | Not Available | 548 | Open in IMG/M |
3300009147|Ga0114129_12650883 | Not Available | 598 | Open in IMG/M |
3300009156|Ga0111538_10700899 | Not Available | 1283 | Open in IMG/M |
3300009162|Ga0075423_10794441 | Not Available | 1001 | Open in IMG/M |
3300009162|Ga0075423_12864245 | Not Available | 528 | Open in IMG/M |
3300009168|Ga0105104_10544684 | Not Available | 656 | Open in IMG/M |
3300009792|Ga0126374_10203814 | Not Available | 1254 | Open in IMG/M |
3300010043|Ga0126380_10070615 | Not Available | 1980 | Open in IMG/M |
3300010043|Ga0126380_10611604 | Not Available | 860 | Open in IMG/M |
3300010043|Ga0126380_11875094 | Not Available | 544 | Open in IMG/M |
3300010047|Ga0126382_10423425 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1046 | Open in IMG/M |
3300010047|Ga0126382_10816327 | Not Available | 797 | Open in IMG/M |
3300010047|Ga0126382_11527244 | Not Available | 615 | Open in IMG/M |
3300010358|Ga0126370_10042508 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2834 | Open in IMG/M |
3300010359|Ga0126376_10060185 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2730 | Open in IMG/M |
3300010359|Ga0126376_11021579 | Not Available | 829 | Open in IMG/M |
3300010360|Ga0126372_12733139 | Not Available | 545 | Open in IMG/M |
3300010362|Ga0126377_11997698 | Not Available | 656 | Open in IMG/M |
3300010366|Ga0126379_13269777 | Not Available | 543 | Open in IMG/M |
3300010375|Ga0105239_11849938 | Not Available | 700 | Open in IMG/M |
3300010376|Ga0126381_101694360 | Not Available | 913 | Open in IMG/M |
3300010376|Ga0126381_102191750 | Not Available | 795 | Open in IMG/M |
3300010403|Ga0134123_13311052 | Not Available | 520 | Open in IMG/M |
3300010868|Ga0124844_1297751 | Not Available | 546 | Open in IMG/M |
3300012937|Ga0162653_100004668 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 1425 | Open in IMG/M |
3300012948|Ga0126375_10291249 | Not Available | 1128 | Open in IMG/M |
3300012948|Ga0126375_11375717 | Not Available | 597 | Open in IMG/M |
3300012948|Ga0126375_11427382 | Not Available | 588 | Open in IMG/M |
3300012955|Ga0164298_10016124 | All Organisms → cellular organisms → Bacteria | 3070 | Open in IMG/M |
3300012957|Ga0164303_11269137 | Not Available | 543 | Open in IMG/M |
3300012961|Ga0164302_10194831 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1240 | Open in IMG/M |
3300012971|Ga0126369_10953500 | Not Available | 945 | Open in IMG/M |
3300012971|Ga0126369_12633646 | Not Available | 587 | Open in IMG/M |
3300012986|Ga0164304_10137013 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1522 | Open in IMG/M |
3300012989|Ga0164305_11400199 | Not Available | 616 | Open in IMG/M |
3300013306|Ga0163162_12589168 | Not Available | 584 | Open in IMG/M |
3300013308|Ga0157375_12644717 | Not Available | 600 | Open in IMG/M |
3300015371|Ga0132258_10846765 | Not Available | 2307 | Open in IMG/M |
3300015371|Ga0132258_10949118 | Not Available | 2173 | Open in IMG/M |
3300015371|Ga0132258_12045794 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1440 | Open in IMG/M |
3300015372|Ga0132256_103266603 | Not Available | 545 | Open in IMG/M |
3300015373|Ga0132257_100572485 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1393 | Open in IMG/M |
3300016387|Ga0182040_10000146 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 30213 | Open in IMG/M |
3300018064|Ga0187773_10210251 | Not Available | 1041 | Open in IMG/M |
3300018067|Ga0184611_1094707 | Not Available | 1034 | Open in IMG/M |
3300018072|Ga0184635_10187507 | Not Available | 825 | Open in IMG/M |
3300018072|Ga0184635_10284918 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 651 | Open in IMG/M |
3300018081|Ga0184625_10069839 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 1784 | Open in IMG/M |
3300018081|Ga0184625_10147173 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1230 | Open in IMG/M |
3300018081|Ga0184625_10382933 | All Organisms → cellular organisms → Bacteria | 728 | Open in IMG/M |
3300019269|Ga0184644_1084138 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 729 | Open in IMG/M |
3300019869|Ga0193705_1086185 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 597 | Open in IMG/M |
3300019877|Ga0193722_1073493 | Not Available | 846 | Open in IMG/M |
3300021078|Ga0210381_10129471 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 843 | Open in IMG/M |
3300021344|Ga0193719_10058356 | Not Available | 1674 | Open in IMG/M |
3300021344|Ga0193719_10193601 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 870 | Open in IMG/M |
3300021560|Ga0126371_10028617 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462 | 5195 | Open in IMG/M |
3300021560|Ga0126371_10840477 | Not Available | 1063 | Open in IMG/M |
3300021560|Ga0126371_11345067 | Not Available | 847 | Open in IMG/M |
3300021951|Ga0222624_1349276 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 638 | Open in IMG/M |
3300021951|Ga0222624_1351465 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 527 | Open in IMG/M |
3300022195|Ga0222625_1485701 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 649 | Open in IMG/M |
3300022694|Ga0222623_10338587 | Not Available | 575 | Open in IMG/M |
3300022756|Ga0222622_10086983 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1885 | Open in IMG/M |
3300025916|Ga0207663_10526859 | All Organisms → cellular organisms → Bacteria | 921 | Open in IMG/M |
3300025961|Ga0207712_11146384 | Not Available | 693 | Open in IMG/M |
3300027873|Ga0209814_10003160 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 6110 | Open in IMG/M |
3300027873|Ga0209814_10069344 | Not Available | 1481 | Open in IMG/M |
3300027880|Ga0209481_10359030 | Not Available | 744 | Open in IMG/M |
3300027907|Ga0207428_10055701 | Not Available | 3143 | Open in IMG/M |
3300027909|Ga0209382_12080395 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 541 | Open in IMG/M |
3300028708|Ga0307295_10071568 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 913 | Open in IMG/M |
3300028784|Ga0307282_10383547 | Not Available | 680 | Open in IMG/M |
3300028814|Ga0307302_10167902 | Not Available | 1066 | Open in IMG/M |
3300028828|Ga0307312_10251401 | Not Available | 1144 | Open in IMG/M |
3300030969|Ga0075394_11964787 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 636 | Open in IMG/M |
3300030993|Ga0308190_1200267 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 502 | Open in IMG/M |
3300031096|Ga0308193_1069672 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 560 | Open in IMG/M |
3300031170|Ga0307498_10002258 | Not Available | 3026 | Open in IMG/M |
3300031170|Ga0307498_10155397 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 763 | Open in IMG/M |
3300031170|Ga0307498_10283009 | Not Available | 614 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10085870 | Not Available | 838 | Open in IMG/M |
3300031199|Ga0307495_10190632 | Not Available | 557 | Open in IMG/M |
3300031226|Ga0307497_10478723 | Not Available | 610 | Open in IMG/M |
3300031231|Ga0170824_109517190 | Not Available | 1026 | Open in IMG/M |
3300031446|Ga0170820_10842217 | Not Available | 532 | Open in IMG/M |
3300031469|Ga0170819_14831011 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 514 | Open in IMG/M |
3300031545|Ga0318541_10000149 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 19649 | Open in IMG/M |
3300031547|Ga0310887_11127565 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 504 | Open in IMG/M |
3300031679|Ga0318561_10049835 | Not Available | 2092 | Open in IMG/M |
3300031720|Ga0307469_11350659 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 678 | Open in IMG/M |
3300031720|Ga0307469_11589835 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 628 | Open in IMG/M |
3300031724|Ga0318500_10122156 | Not Available | 1205 | Open in IMG/M |
3300031740|Ga0307468_100985574 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 740 | Open in IMG/M |
3300031859|Ga0318527_10341344 | Not Available | 638 | Open in IMG/M |
3300032180|Ga0307471_100666427 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1204 | Open in IMG/M |
3300033433|Ga0326726_10324870 | Not Available | 1448 | Open in IMG/M |
3300033433|Ga0326726_11937366 | Not Available | 574 | Open in IMG/M |
3300034090|Ga0326723_0461214 | Not Available | 581 | Open in IMG/M |
3300034643|Ga0370545_096533 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 637 | Open in IMG/M |
3300034680|Ga0370541_021149 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 734 | Open in IMG/M |
3300034681|Ga0370546_031901 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 753 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 18.68% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 13.19% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 12.64% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 12.64% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 4.95% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 3.85% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.30% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.75% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.75% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.20% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.20% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.65% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.65% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.65% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.65% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 1.65% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.10% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.10% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 0.55% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.55% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.55% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.55% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.55% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.55% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.55% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.55% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.55% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.55% |
Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 0.55% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.55% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.55% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.55% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.55% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.55% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.55% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.55% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.55% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2040502001 | Soil microbial communities from sample at FACE Site 2 North Carolina CO2+ | Environmental | Open in IMG/M |
2088090015 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
2189573002 | Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml) | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
3300000580 | Forest soil microbial communities from Amazon forest - 2010 replicate II A01 | Environmental | Open in IMG/M |
3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
3300000754 | Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TB | Environmental | Open in IMG/M |
3300000793 | Forest soil microbial communities from Amazon forest - 2010 replicate II A001 | Environmental | Open in IMG/M |
3300000816 | Forest soil microbial communities from Amazon forest - 2010 replicate II A10 | Environmental | Open in IMG/M |
3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300003998 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 | Environmental | Open in IMG/M |
3300004024 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 | Environmental | Open in IMG/M |
3300004025 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Host-Associated | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006058 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Host-Associated | Open in IMG/M |
3300006194 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 | Host-Associated | Open in IMG/M |
3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009168 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300010868 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction) | Environmental | Open in IMG/M |
3300012937 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015 | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
3300018064 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG | Environmental | Open in IMG/M |
3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
3300018072 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2 | Environmental | Open in IMG/M |
3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
3300019269 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019869 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2 | Environmental | Open in IMG/M |
3300019877 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1 | Environmental | Open in IMG/M |
3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
3300021344 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2 | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300021951 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028708 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152 | Environmental | Open in IMG/M |
3300028784 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121 | Environmental | Open in IMG/M |
3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
3300030969 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030993 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031096 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031170 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031199 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031469 | Fir Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031724 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031859 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
3300034090 | Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N | Environmental | Open in IMG/M |
3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034680 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034681 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
FACENCE_5285260 | 2040502001 | Soil | MSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQI |
GPICI_02926580 | 2088090015 | Soil | MSITFINRTSRVTIAGRVAASRRPHEWNELTMLGDYHLPFGKTEARAEAAKWLCRV |
FE1_06559050 | 2189573002 | Grass Soil | MSVTFINWTSRVAIAGRVAERRRPQGWNELTLRGDYHAPFGKAEARAEAEKWIWQI |
INPhiseqgaiiFebDRAFT_1016347474 | 3300000364 | Soil | MSDSFINRTSRVAIAGRVAERLRPQGWDDLSLRGDYHPPFGKTEARIEAAKWLCLV* |
INPhiseqgaiiFebDRAFT_1016365513 | 3300000364 | Soil | MSDSFINWTSRVAIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV* |
F14TC_1030058592 | 3300000559 | Soil | MSNSFINWSSRVAIAGRIGKRLRPQGWNKFTLRGDYHLPFGKSEARAEAAKWLCQV* |
AF_2010_repII_A01DRAFT_10007775 | 3300000580 | Forest Soil | MSDSFINQTSRVAIAARVAEHHRPQYWTEFTLRGDYHSPFGKIEARAEAAKWLCLV* |
AF_2010_repII_A01DRAFT_10430112 | 3300000580 | Forest Soil | MSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI* |
AF_2010_repII_A1DRAFT_100370071 | 3300000597 | Forest Soil | MSDSFINQTSRVAIAGRVXEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV* |
JGI11851J11668_10027322 | 3300000754 | Soil | MSITFINRTSRVAIAGRVAEWRRPHEWNEXTMLGDYHLPFGKAEARAEAAKWLCQV* |
AF_2010_repII_A001DRAFT_100067604 | 3300000793 | Forest Soil | MSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV* |
AF_2010_repII_A10DRAFT_10086592 | 3300000816 | Forest Soil | MSDSFINQTSRVAIAGRFAEHHRPQYWTELTLRGDYHPPFGKIEARAEAAKWLCLV* |
AF_2010_repII_A10DRAFT_10189391 | 3300000816 | Forest Soil | MSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWL |
F14TB_1017401551 | 3300001431 | Soil | NWTSRVAIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV* |
JGI25405J52794_101103022 | 3300003911 | Tabebuia Heterophylla Rhizosphere | MSDNFINWSSRVAIAGRIGERLRPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV* |
Ga0055472_100500232 | 3300003998 | Natural And Restored Wetlands | MSDTSTNLTSRVAIAGRVAELRRQSQGWSETITLGDYHQPFGKMEARAEAAKWLWQP* |
Ga0055436_101460191 | 3300004024 | Natural And Restored Wetlands | MLDNFTNWTSRVAIAGRVAERRRQPQDWNETMTLGDYHLPFGKVTAPAEAARWLCQP* |
Ga0055433_100708672 | 3300004025 | Natural And Restored Wetlands | PMSDTFINRTSRVAIAGRIAEERRPQDWNELSTPGDYHPPFGESEAKAEAAKWLCQV* |
Ga0063356_1006188532 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSDIFVNWTSRVAIAGRIAERRRPQDWNELTTPGDYHAPFGKIEAKVEAAKWLCQV* |
Ga0062595_1003733432 | 3300004479 | Soil | NTFMNLTSRVAIAGRRPRSWNESMILGDYHLPFGKVEARAEAAKWIWQI* |
Ga0062595_1008550701 | 3300004479 | Soil | MSDSFINQTSRVAIAGRVAEHHRPQYWTELTLRGDYHAPFGKIEARAEAAKWLCLV* |
Ga0062595_1013381202 | 3300004479 | Soil | MSITFINRTSRVAIAGRVAESRRPHEWNELAMLGDYHLPFGKTEARAEAAKWLCQV* |
Ga0065704_104131432 | 3300005289 | Switchgrass Rhizosphere | MSITFINRTSRVAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV* |
Ga0065705_101732563 | 3300005294 | Switchgrass Rhizosphere | MIGGTMSITFINRTSRVAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV* |
Ga0066388_1000735602 | 3300005332 | Tropical Forest Soil | MSDIFINWSSRVAISGRIGERLRPQGWNEFTLRGDYHAPFGKSEARVEAAKWLCQV* |
Ga0066388_1002467294 | 3300005332 | Tropical Forest Soil | MSDSFINQTSRVAISARVAEHHRPENWTELTTRGDYHLPFGKTEARTEAAKWLCQI* |
Ga0066388_1003686462 | 3300005332 | Tropical Forest Soil | MSDSFINQTSRVAIAGRVAEHQRPQYWTELTLRGDYHPPFGKIEARAEAAKWLCLV* |
Ga0066388_1003735852 | 3300005332 | Tropical Forest Soil | MSDSFINQTSRVAIAGRVAERHRPQYWNELTFQGDYHPPFGKIEARAEAAKWLCLI* |
Ga0066388_1004710783 | 3300005332 | Tropical Forest Soil | MSDSFINWTSRVAIAGRVGGQRHESWNELTLRGDYHAPFGKSQARAEAAKWLCQV* |
Ga0066388_1011604652 | 3300005332 | Tropical Forest Soil | MSDSFINWTSRVAIAGRVGERLRQESWNELTLRGDYHAPFGKSQARAEAAKWLWQV* |
Ga0066388_1016500011 | 3300005332 | Tropical Forest Soil | MSDSFINQTSRVAIAGRVSEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV* |
Ga0066388_1020767352 | 3300005332 | Tropical Forest Soil | MSGSFINHTSRVAIAGRVAEHQRPLCWSDLTLRGDYHPPFGKIEARLEAAKWLCLI* |
Ga0066388_1021327362 | 3300005332 | Tropical Forest Soil | MEVPMSDSFINWSSRVAIAGRIGERLRPQGWNEFIRGDYHRPFGKSEARAEAAKWLCQV* |
Ga0066388_1028037021 | 3300005332 | Tropical Forest Soil | MSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLC |
Ga0066388_1032671083 | 3300005332 | Tropical Forest Soil | MSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAE |
Ga0066388_1084600931 | 3300005332 | Tropical Forest Soil | MSDSFINQTSRVAIAARVAEHHRPQYWTELTLRGDYHSPFGKIEARAEAAKWLCL |
Ga0070675_1007400583 | 3300005354 | Miscanthus Rhizosphere | MSGSFINHTSRVAIAGRVAEHHRPPCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0070711_1005982341 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MSITFINRTSRVAIAGRLAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV* |
Ga0066905_1001480282 | 3300005713 | Tropical Forest Soil | MSDSFINQTSRVAIAARVAEHHRPQYWTELTLRGDYHSPFGKIEARAEAAKWLCLV* |
Ga0066905_1003469982 | 3300005713 | Tropical Forest Soil | MSDSFINWSSRVAIAGRIGERLRPQGWNEFTLRGDYQLPFGKSEARAEAAKWLCQV* |
Ga0066905_1004123181 | 3300005713 | Tropical Forest Soil | MSDSFINWSSRVAIAGRIGERHQPQGWNEFTLRGDYHLPFGKSEARAEA |
Ga0066905_1004509191 | 3300005713 | Tropical Forest Soil | NFRDPHHSRTQSTILYLRIDLRLEAPMSSSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGRIEARTEAAKWLCLV* |
Ga0066905_1005327803 | 3300005713 | Tropical Forest Soil | MWDSFINWTSRVAIAGRIGERLRPQGWNELTLRGDYHPPFGKNEARAEAAKWLCQV* |
Ga0066905_1006299712 | 3300005713 | Tropical Forest Soil | METPVSDTFINWTSRVAIAGRIGERLRAQGWNELTLRGDYHLPFGKSEARAEAAKWLCLV |
Ga0066905_1007141443 | 3300005713 | Tropical Forest Soil | MSGSFINHTSRVAIAGRVAEHQRPLCWNDLTLRGDYHPPFGKIEVQLEAAKWLCLV* |
Ga0066903_1032221952 | 3300005764 | Tropical Forest Soil | MSGSFINHTSRVAIAGRVTEHRRPLCWNDLTLRGDYHPPFGKIEARLEAAKWLCLI* |
Ga0066903_1052168451 | 3300005764 | Tropical Forest Soil | MSDTFINWTIRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV |
Ga0066903_1081262422 | 3300005764 | Tropical Forest Soil | MSGSFINHTSRVAIAGRVAEHRRPQDWNDLRLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0066903_1082316251 | 3300005764 | Tropical Forest Soil | MSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAE |
Ga0081455_100029332 | 3300005937 | Tabebuia Heterophylla Rhizosphere | VSIFINRTSRAAIAARVAESRRPHEWNELPMLGDYHLPFGKTEARAEAAKWLCQV* |
Ga0081455_100235582 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MSNSFINWTSRVAIAGRVGERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV* |
Ga0081455_100239912 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MSGTFINWTSRVAIAGRIGERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV* |
Ga0081455_102497952 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MWDSFINWTSRVAIAGRVGERLRPQGWNELTLRGDYHPPFGKNEARAEAAKWLCQV* |
Ga0081455_106463131 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MSDSFINWTSRVAIAGRIWERLRPQSWNELTLRGDYHPPFGKSEARAEAAKWLCQV* |
Ga0081540_13216961 | 3300005983 | Tabebuia Heterophylla Rhizosphere | MSDSFINWISRVAIAGRIGERHQPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV* |
Ga0075417_100007629 | 3300006049 | Populus Rhizosphere | MSITFINRTSRVTIAGRVAASRRPHEWNELTMLGDYHLPFGKTEARAEAAKWLCRV* |
Ga0075417_100017869 | 3300006049 | Populus Rhizosphere | MSDSFINWTSRVATAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV* |
Ga0075417_101487544 | 3300006049 | Populus Rhizosphere | MSDSFINRTSRVAIAGRIAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCIV* |
Ga0075028_1006823872 | 3300006050 | Watersheds | FINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQL* |
Ga0075432_100202124 | 3300006058 | Populus Rhizosphere | MSDSFINWTSRVAIAARIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV* |
Ga0075427_100049115 | 3300006194 | Populus Rhizosphere | MSDSFINWTSRVAIAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV* |
Ga0075422_100983502 | 3300006196 | Populus Rhizosphere | MSITFINRTSRVAIAGRVAASRRPHEWNELTMLGDYHLPFGKTEARAEAAKWLCRV* |
Ga0075428_1000540498 | 3300006844 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHTPFGKSEARTEAAKWLCIV* |
Ga0075428_1015618241 | 3300006844 | Populus Rhizosphere | MSITFINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKTEARAEAVKWLCQV* |
Ga0075430_1000816821 | 3300006846 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV* |
Ga0075430_1004309182 | 3300006846 | Populus Rhizosphere | MSITFINRTSRVAIAGRVAERRPPHEWSELTILGDYHLPFGKAEARAEAAKWLCQV* |
Ga0075431_1006873514 | 3300006847 | Populus Rhizosphere | MSDSFINRTSRVAIAGRIAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLC |
Ga0075433_101563661 | 3300006852 | Populus Rhizosphere | EAPMSDSFINWTSRVAIAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV* |
Ga0075433_109158422 | 3300006852 | Populus Rhizosphere | MSDSFINWTSRVAIAGRVGERQRHERWNELTLRGDYHAPFGKSEARAEAAKWLCQV* |
Ga0075433_113132771 | 3300006852 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHTPFGKSEARAEAAKWLCVV* |
Ga0075425_1002037192 | 3300006854 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHAPFGKTEARVEAAKCLCLV* |
Ga0075425_1005231004 | 3300006854 | Populus Rhizosphere | MSDSFTNHTSRVAIASRVAEHRRPLIWNDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0075425_1006892442 | 3300006854 | Populus Rhizosphere | MSDNFINQTSRVAISARVAEHHRPENWTELTTRGDYHQPFGKAEARTEAAKWLCQI* |
Ga0075434_1007452292 | 3300006871 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHAPFGKTEARVEAAKWLCLV* |
Ga0075424_1024935922 | 3300006904 | Populus Rhizosphere | MSGSFINHTSRVAIAGRVAEHQRPPCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0075436_1000934453 | 3300006914 | Populus Rhizosphere | MSDSFINWTSRVCIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV* |
Ga0075419_102392672 | 3300006969 | Populus Rhizosphere | MSDSFINRTSRVAIAGRIAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV* |
Ga0075435_1002162241 | 3300007076 | Populus Rhizosphere | MSGSFINHTSRVAIAGRVAEHQRPQFWTDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0075435_1013012371 | 3300007076 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWKELTLRGDYHKPFGKTEARAEAAKWLCIV* |
Ga0075418_115627572 | 3300009100 | Populus Rhizosphere | MADSFINRTSRVAIAGRVAERLRPQSWNELTLRGDYHAPFGKTEARAEAAKWLCLV* |
Ga0075418_126400341 | 3300009100 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHAPFGKTEARVEATKCLCLV* |
Ga0114129_126508832 | 3300009147 | Populus Rhizosphere | MLNTFVNWTSRVAIAGRVAGQRRADNWNELPMLGDYHLPFGNVEAKTEAAKWLCQV* |
Ga0111538_107008992 | 3300009156 | Populus Rhizosphere | MSGSFINHTSRVAIAGRVAEHRRPLIWNDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0075423_107944412 | 3300009162 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVADRLRPQGWNELTLRGDYHAPFGKTEARVEAAKWLCLV* |
Ga0075423_128642452 | 3300009162 | Populus Rhizosphere | MSDEFINQTSRVAISARVAEHHRPENWTELTTRGDYHQPFGKAEARTEAAKWLCQI* |
Ga0105104_105446841 | 3300009168 | Freshwater Sediment | MSDSFINTSRVAIAGRIGERLRLRGWDELTLCGDYHAPFGKSEARAEAAKWLCLV* |
Ga0126374_102038142 | 3300009792 | Tropical Forest Soil | MSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV* |
Ga0126380_100706152 | 3300010043 | Tropical Forest Soil | MSDSFINQTSRVAIAARVAEHHRPQYWTELTLRGDYHPPFGKIEARAEAAKWLCLV* |
Ga0126380_106116042 | 3300010043 | Tropical Forest Soil | MSDSFINWSSRVAIAGRIGERLRPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV* |
Ga0126380_118750941 | 3300010043 | Tropical Forest Soil | MSDSFINRTSRVAIAARVLERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV* |
Ga0126382_104234252 | 3300010047 | Tropical Forest Soil | TSRVAIAGRIAERLWNELSLRGDYHTPFGKTEARAEATKWLCLI* |
Ga0126382_108163271 | 3300010047 | Tropical Forest Soil | MLDSFINRTSRVAIAGRIGERLRPQGWNELTLRGDYHPPSGKSEARAEAAKWLCLV* |
Ga0126382_115272441 | 3300010047 | Tropical Forest Soil | MSDSFINWSSRVAIAGRIGERHQPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV* |
Ga0126370_100425084 | 3300010358 | Tropical Forest Soil | MSDTFINWTIRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV* |
Ga0126376_100601854 | 3300010359 | Tropical Forest Soil | MSDMFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV* |
Ga0126376_110215791 | 3300010359 | Tropical Forest Soil | MWDSFINWTSRVAIAGRIGERLRPQGWNELTLRGDYHPPFGKNEARAEAAK |
Ga0126372_127331391 | 3300010360 | Tropical Forest Soil | MSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGRIEARTEAAKWLCLV* |
Ga0126377_119976981 | 3300010362 | Tropical Forest Soil | MSDSFINRTSRVTIAARVLERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV* |
Ga0126379_132697772 | 3300010366 | Tropical Forest Soil | MSGSFINHTSRVAIAGRVAEHRRPQDWNDLRLRGDYHSPFGKIEARL |
Ga0105239_118499381 | 3300010375 | Corn Rhizosphere | MSASFINHTSRVAIAGRVAEHRRPLIWNDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0126381_1016943601 | 3300010376 | Tropical Forest Soil | IDSRLEAPMSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLFLV* |
Ga0126381_1021917501 | 3300010376 | Tropical Forest Soil | MWDMFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV* |
Ga0134123_133110521 | 3300010403 | Terrestrial Soil | MSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV* |
Ga0124844_12977512 | 3300010868 | Tropical Forest Soil | MSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYYRPFGKSEARAEAVKWLCQV* |
Ga0162653_1000046683 | 3300012937 | Soil | MSITFINRTSRVAIAGRVAEQRRPETTDELTTPGDYHLPFGKEEARAEAAKWLCQV* |
Ga0126375_102912491 | 3300012948 | Tropical Forest Soil | MSGSFINHTSRVAIAGRVAEHQRPLCWNDLTLRGDYHAPFGKIEARLEAAKWLCLV* |
Ga0126375_113757171 | 3300012948 | Tropical Forest Soil | MSDSFINWSSRVAIVGRIGERLRPQGWNEFILRGDYHRPFGKSEARAEAAKWLCQV* |
Ga0126375_114273821 | 3300012948 | Tropical Forest Soil | SRVAIAGRVAKHQGPQHWNELTLRGDYHPPFGKIEARAEAAKWFCLV* |
Ga0164298_100161242 | 3300012955 | Soil | MSDSFINQTRRVALAGRVAEHHRPQYWTELTLRGDYHAPFGKIEARAEAAKWLCLV* |
Ga0164303_112691371 | 3300012957 | Soil | MSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV* |
Ga0164302_101948312 | 3300012961 | Soil | MSITFINRTSRVAIAGRLAEWRRQPQNWNALNMLGDYHLPFGKAEARAEAAKWLCQV* |
Ga0126369_109535001 | 3300012971 | Tropical Forest Soil | SRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI* |
Ga0126369_126336462 | 3300012971 | Tropical Forest Soil | MSDTFINWTSRVAIAGRIGERLRPQGNEFTLRGDYHRPFGKSEARAEAV |
Ga0164304_101370131 | 3300012986 | Soil | MSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAVKWLCQV |
Ga0164305_114001992 | 3300012989 | Soil | MSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAVKWLCQV* |
Ga0163162_125891681 | 3300013306 | Switchgrass Rhizosphere | MSASFINHTSRVAIAGRVAEHRRPLCWNDLKLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0157375_126447171 | 3300013308 | Miscanthus Rhizosphere | MSGSFINHTSRVAIAGRVAEHQRPQCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0132258_108467651 | 3300015371 | Arabidopsis Rhizosphere | MSGSFINHTSRVAIAGRVAEHLRPQFWTYLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0132258_109491184 | 3300015371 | Arabidopsis Rhizosphere | MSDDFINQTSRVAISARVAEHHRPENWTELTTTRGDYHQPFGKAEARTEAAKWLCQI* |
Ga0132258_120457941 | 3300015371 | Arabidopsis Rhizosphere | MSNTFVNWSSRVAIAGRVAERRRLHEGNELTIQGDYPLPFGKAEARAEAAKWLCQV* |
Ga0132256_1032666031 | 3300015372 | Arabidopsis Rhizosphere | MSGSFINHTSRVAIAGRVAEHQRPLFWNDLTLPGDYHPPFGKIEARLEAAKWLCLV* |
Ga0132257_1005724853 | 3300015373 | Arabidopsis Rhizosphere | MSASFINHTSRVAIAGRVAEHQRPPCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV* |
Ga0182040_100001464 | 3300016387 | Soil | MSDSFINQTSRVAIAGRVSEHHTPWNELTLRGDYHPPFGKIEARAEAAKWLCLV |
Ga0187773_102102511 | 3300018064 | Tropical Peatland | MSTFVNWTSRVAVAGRIAERRCADNWNELPMRGDYHVPFGKAEARAEAAKWLWQV |
Ga0184611_10947071 | 3300018067 | Groundwater Sediment | MSNTFMNWTSWVAIAARIAERRRPQNWNELTPGDYHQPFGKAEARAEAAKWLCQV |
Ga0184635_101875072 | 3300018072 | Groundwater Sediment | MSNTFMNWTSWVAIAARIAERRRPQNWNELTMPGDYHQPFGKAEARAEAAKWLCQV |
Ga0184635_102849181 | 3300018072 | Groundwater Sediment | PMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0184625_100698392 | 3300018081 | Groundwater Sediment | MSITFINRTSRVAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0184625_101471732 | 3300018081 | Groundwater Sediment | MSNTFMNWTSWVAIAARIAERRRPQNWNELTMPGDFHQPFGKAEARAEAAKWLCQV |
Ga0184625_103829332 | 3300018081 | Groundwater Sediment | MSDSFVNWTSRVAIAGRIVKRLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV |
Ga0184644_10841381 | 3300019269 | Groundwater Sediment | GAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0193705_10861852 | 3300019869 | Soil | SRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCEV |
Ga0193722_10734932 | 3300019877 | Soil | MSDRFINWTSRVAIAARIGERLRPQGWNEFTLRGDYHPPFGKSEARA |
Ga0210381_101294711 | 3300021078 | Groundwater Sediment | MSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV |
Ga0193719_100583564 | 3300021344 | Soil | MSDNFINWTSRVAIAGRVGERLRPQGWNEAFRGDYHPPFGKAEARAEAAKWIWQV |
Ga0193719_101936012 | 3300021344 | Soil | MSITFINRTSRVAIAGRVAEWRGQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV |
Ga0126371_100286176 | 3300021560 | Tropical Forest Soil | MSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI |
Ga0126371_108404773 | 3300021560 | Tropical Forest Soil | SLINQTSRVAIAARVPEHHRPQYWTELTLRGDYHSPFGKIVARAEAAKWLCLV |
Ga0126371_113450671 | 3300021560 | Tropical Forest Soil | MSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV |
Ga0222624_13492761 | 3300021951 | Groundwater Sediment | ALMSITFINRTSRVAIAGCVAEWRRQPQNWNELTMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0222624_13514651 | 3300021951 | Groundwater Sediment | LGAPMSITFVNGTSRVAIGGCVAGSRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0222625_14857012 | 3300022195 | Groundwater Sediment | GLGAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0222623_103385872 | 3300022694 | Groundwater Sediment | MSDSFINRTSRVAIAGRIGERLRPQGWNEFTLRGDYHLPFGESEARAQAAKWLCLV |
Ga0222622_100869831 | 3300022756 | Groundwater Sediment | VLVSIRVLQRLEVTMSNTFRNWTSRVAIAGRIADRRRLQDWNELTMPGDYHGPFGKTVARAEAAKWLWQI |
Ga0207663_105268593 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDDFINQTSRVAIAGRVAEHHRPQYWTELTLRGDYHAPFGKIEARAEAAKWLCLV |
Ga0207712_111463842 | 3300025961 | Switchgrass Rhizosphere | MSGSFINHTSRVAIAGRVAEHQRPLCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV |
Ga0209814_100031605 | 3300027873 | Populus Rhizosphere | MSDSFINWTSRVAIAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV |
Ga0209814_100693443 | 3300027873 | Populus Rhizosphere | MSDSFINWTSRVAIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV |
Ga0209481_103590302 | 3300027880 | Populus Rhizosphere | AFFNRTSRVAIAGRVAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV |
Ga0207428_100557013 | 3300027907 | Populus Rhizosphere | MSDSFINRTSRVAIAGRVAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV |
Ga0209382_120803952 | 3300027909 | Populus Rhizosphere | MSITFINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKTEARAEAVKWLCQV |
Ga0307295_100715681 | 3300028708 | Soil | MSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0307282_103835471 | 3300028784 | Soil | SAVLVSIRVLQRLEVTMSNTFRNWTSRVAIAGRIADRRRLQDWNELTMPGDYHGPFGKTVARAEAAKWLWQI |
Ga0307302_101679021 | 3300028814 | Soil | MSDSFINWNSRVAIAGRVGERQRHESWNELTLRGDYHPPFGKSEARAEAAKWLCQV |
Ga0307312_102514013 | 3300028828 | Soil | WEGPMSDSFINRASRVAIAGRIGERLRPQGWNELTLRGDHHPPFGKSEARAEAAKWLCQV |
Ga0075394_119647872 | 3300030969 | Soil | SRVAIAGRVAEWRRQPQSWNELNMLGDYHLPFGKAEARTEAAKWLCQV |
Ga0308190_12002671 | 3300030993 | Soil | LGAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQ |
Ga0308193_10696721 | 3300031096 | Soil | LGAPMSITLINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCE |
Ga0307498_100022586 | 3300031170 | Soil | MSNTFVNWTSWVAIAGRIAEERRVDRNELPMLGDYHLPFGKVEAKAEAAKWLCQV |
Ga0307498_101553972 | 3300031170 | Soil | MSVSFINWTSRVAIAGRVAERRRPQGWNELTLRGDYHAPFGKAEAWA |
Ga0307498_102830092 | 3300031170 | Soil | LQSEPEASMSNTFVNWTSWVAIAGRVAEQRHADRNELPMLGDYHLPFGKVEAKAEAEKWLCQV |
(restricted) Ga0255310_100858702 | 3300031197 | Sandy Soil | MNTFINWTSQVAIASRIVEERREQDWNELKLLGDYHPPFGKDEARAEAAKWLCQV |
Ga0307495_101906322 | 3300031199 | Soil | LQSEPEASMSNTFVNWTSWVAIAGRVAEQRRADRNELPMLGDYHLPFGKVEAKAEAAKWLCQV |
Ga0307497_104787231 | 3300031226 | Soil | MSNTFVNWTSWVAIAGRVAEQRRADRDELQMLGDYHLPFGKGEAKAEAAKWLCQV |
Ga0170824_1095171902 | 3300031231 | Forest Soil | MSVTFINWTSRVAIAARVAERRRPQGWNELTLRGDYHAPFGKAEARAEAEKWIWQI |
Ga0170820_108422171 | 3300031446 | Forest Soil | MSSTYVNWSSRVAIAGRVAERRRPHEWNELTIQGDYHLRFGKAEARAAAAKWLCQI |
Ga0170819_148310111 | 3300031469 | Forest Soil | QGLGAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0318541_1000014925 | 3300031545 | Soil | MSDSFINQTSRVAIAGRVSEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV |
Ga0310887_111275651 | 3300031547 | Soil | MSITFINRTSRVAIAGRLAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0318561_100498355 | 3300031679 | Soil | YLRIDSRLEAPMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI |
Ga0307469_113506592 | 3300031720 | Hardwood Forest Soil | MSITFINRTSRAAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0307469_115898351 | 3300031720 | Hardwood Forest Soil | MSITFINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQL |
Ga0318500_101221563 | 3300031724 | Soil | ILYLRIDSRLEAPMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI |
Ga0307468_1009855742 | 3300031740 | Hardwood Forest Soil | MSITFINRTSRAAIASRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0318527_103413441 | 3300031859 | Soil | SRLEAPMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI |
Ga0307471_1006664272 | 3300032180 | Hardwood Forest Soil | MSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV |
Ga0326726_103248701 | 3300033433 | Peat Soil | MFTFINQTSRAAIEGHIAQRRGANDWNELTTRGDHHLPFGKAEARAEAAKWLCQV |
Ga0326726_119373662 | 3300033433 | Peat Soil | MSNTYVNWSSRVAIAGRVAERRRQPQNWNELKMLGDYHLPFGKAEARTEAAKWLCQV |
Ga0326723_0461214_394_564 | 3300034090 | Peat Soil | MSNTFMNWTSWVAVAARIAERRRPQNWNELTTPGDYHQPFGKAEARAEAAKWLCQV |
Ga0370545_096533_449_622 | 3300034643 | Soil | MSITFINRTSRVAIAGCVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV |
Ga0370541_021149_14_187 | 3300034680 | Soil | MSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKTEARTEAAKWLCQV |
Ga0370546_031901_566_751 | 3300034681 | Soil | IGAPMSITFINRTSRVASSGRVSEWRRAPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQ |
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