Metagenome / Metatranscriptome Family F031642

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031642
Family Type	Metagenome / Metatranscriptome
Number of Sequences	182
Average Sequence Length	79 residues
Representative Sequence	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR
Number of Associated Samples	87
Number of Associated Scaffolds	182

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.98 %
% of genes near scaffold ends (potentially truncated)	30.22 %
% of genes from short scaffolds (< 2000 bps)	97.80 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.725 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (33.517 % of family members)
Environment Ontology (ENVO)	Unclassified (39.011 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.549 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.50% β-sheet: 33.64% Coil/Unstructured: 44.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 182 Family Scaffolds
PF05406	WGR	7.14
PF00216	Bac_DNA_binding	3.30
PF00497	SBP_bac_3	2.20
PF01068	DNA_ligase_A_M	1.65
PF01947	Rv2949c-like	1.10
PF12681	Glyoxalase_2	1.10
PF00892	EamA	1.10
PF13340	DUF4096	0.55
PF13808	DDE_Tnp_1_assoc	0.55
PF07311	Dodecin	0.55
PF02586	SRAP	0.55
PF00078	RVT_1	0.55
PF01527	HTH_Tnp_1	0.55
PF03466	LysR_substrate	0.55
PF01841	Transglut_core	0.55
PF00903	Glyoxalase	0.55
PF07592	DDE_Tnp_ISAZ013	0.55

COG ID	Name	Functional Category	% Frequency in 182 Family Scaffolds
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	7.14
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	3.30
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.65
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.65
COG3161	4-hydroxybenzoate synthetase (chorismate-pyruvate lyase)	Coenzyme transport and metabolism [H]	1.10
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.55
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
All Organisms	root	All Organisms	25.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
cellular organisms	root	All Organisms → cellular organisms	25.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.63 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.84 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.84 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.55 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.09 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.69 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.55 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	6.04 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.55 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %
Microvirga aerilata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerilata	0.55 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.55 %
Methylobacterium nodulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	0.55 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.65 %
Methylobacterium nodulans ORS 2060	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans → Methylobacterium nodulans ORS 2060	0.55 %
Microvirga aerilata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerilata	0.55 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.55 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1015445	Not Available	607	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101672848	All Organisms → cellular organisms → Archaea	809	Open in IMG/M
3300000787\|JGI11643J11755_11754640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	819	Open in IMG/M
3300000955\|JGI1027J12803_104026394	Not Available	623	Open in IMG/M
3300001205\|C688J13580_1009270	All Organisms → cellular organisms → Archaea	1072	Open in IMG/M
3300001686\|C688J18823_10570663	Not Available	723	Open in IMG/M
3300001686\|C688J18823_10579277	Not Available	717	Open in IMG/M
3300002568\|C688J35102_117828758	Not Available	509	Open in IMG/M
3300002568\|C688J35102_119575699	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300002568\|C688J35102_119821964	Not Available	785	Open in IMG/M
3300002568\|C688J35102_120038424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300002568\|C688J35102_120633947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1272	Open in IMG/M
3300004479\|Ga0062595_101077276	Not Available	700	Open in IMG/M
3300004479\|Ga0062595_101420783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans → Methylobacterium nodulans ORS 2060	634	Open in IMG/M
3300004801\|Ga0058860_12164568	Not Available	518	Open in IMG/M
3300005093\|Ga0062594_102746330	Not Available	546	Open in IMG/M
3300005331\|Ga0070670_100798467	Not Available	852	Open in IMG/M
3300005338\|Ga0068868_100558408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1010	Open in IMG/M
3300005345\|Ga0070692_11118285	Not Available	557	Open in IMG/M
3300005347\|Ga0070668_100160925	Not Available	1822	Open in IMG/M
3300005347\|Ga0070668_101536894	Not Available	609	Open in IMG/M
3300005347\|Ga0070668_101870003	Not Available	553	Open in IMG/M
3300005364\|Ga0070673_102311989	Not Available	511	Open in IMG/M
3300005457\|Ga0070662_100341834	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300005459\|Ga0068867_102357517	Not Available	506	Open in IMG/M
3300005577\|Ga0068857_102216626	Not Available	539	Open in IMG/M
3300005843\|Ga0068860_100094991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2841	Open in IMG/M
3300006169\|Ga0082029_1513128	Not Available	570	Open in IMG/M
3300006237\|Ga0097621_101753659	Not Available	591	Open in IMG/M
3300006954\|Ga0079219_10218893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1099	Open in IMG/M
3300006954\|Ga0079219_11131717	Not Available	668	Open in IMG/M
3300007790\|Ga0105679_10145737	Not Available	1314	Open in IMG/M
3300009092\|Ga0105250_10088831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1256	Open in IMG/M
3300009098\|Ga0105245_11024962	Not Available	870	Open in IMG/M
3300009098\|Ga0105245_11785516	Not Available	668	Open in IMG/M
3300009098\|Ga0105245_13192258	Not Available	508	Open in IMG/M
3300009101\|Ga0105247_11431628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	561	Open in IMG/M
3300009177\|Ga0105248_10818129	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300009177\|Ga0105248_12651716	Not Available	571	Open in IMG/M
3300009553\|Ga0105249_11836798	Not Available	679	Open in IMG/M
3300009553\|Ga0105249_12529154	Not Available	586	Open in IMG/M
3300009789\|Ga0126307_10369485	Not Available	1156	Open in IMG/M
3300009789\|Ga0126307_10491694	Not Available	990	Open in IMG/M
3300009789\|Ga0126307_10574075	Not Available	911	Open in IMG/M
3300009789\|Ga0126307_11535848	Not Available	540	Open in IMG/M
3300009840\|Ga0126313_10273916	Not Available	1314	Open in IMG/M
3300009840\|Ga0126313_10350235	Not Available	1163	Open in IMG/M
3300009840\|Ga0126313_10376527	Not Available	1123	Open in IMG/M
3300009840\|Ga0126313_10435604	Not Available	1043	Open in IMG/M
3300009840\|Ga0126313_10637874	Not Available	860	Open in IMG/M
3300010036\|Ga0126305_10223981	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300010036\|Ga0126305_10492202	Not Available	817	Open in IMG/M
3300010036\|Ga0126305_10942376	Not Available	590	Open in IMG/M
3300010036\|Ga0126305_11196899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	525	Open in IMG/M
3300010036\|Ga0126305_11212598	Not Available	521	Open in IMG/M
3300010037\|Ga0126304_10191141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1337	Open in IMG/M
3300010037\|Ga0126304_10267162	Not Available	1128	Open in IMG/M
3300010037\|Ga0126304_10277491	Not Available	1107	Open in IMG/M
3300010037\|Ga0126304_10674759	Not Available	698	Open in IMG/M
3300010037\|Ga0126304_10850777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	619	Open in IMG/M
3300010038\|Ga0126315_10269590	Not Available	1043	Open in IMG/M
3300010038\|Ga0126315_10314105	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300010038\|Ga0126315_10386330	Not Available	878	Open in IMG/M
3300010038\|Ga0126315_10648863	Not Available	685	Open in IMG/M
3300010039\|Ga0126309_10259685	Not Available	988	Open in IMG/M
3300010039\|Ga0126309_10494214	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300010039\|Ga0126309_10558825	Not Available	714	Open in IMG/M
3300010039\|Ga0126309_10924205	Not Available	580	Open in IMG/M
3300010040\|Ga0126308_10143653	Not Available	1501	Open in IMG/M
3300010040\|Ga0126308_10274962	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300010040\|Ga0126308_10369054	Not Available	953	Open in IMG/M
3300010040\|Ga0126308_11071978	Not Available	567	Open in IMG/M
3300010041\|Ga0126312_10042120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3051	Open in IMG/M
3300010041\|Ga0126312_10171972	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300010041\|Ga0126312_10320342	Not Available	1096	Open in IMG/M
3300010041\|Ga0126312_10781704	Not Available	692	Open in IMG/M
3300010041\|Ga0126312_10964223	Not Available	623	Open in IMG/M
3300010041\|Ga0126312_11181314	Not Available	564	Open in IMG/M
3300010041\|Ga0126312_11245170	Not Available	549	Open in IMG/M
3300010042\|Ga0126314_10331780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1089	Open in IMG/M
3300010042\|Ga0126314_10422346	Not Available	962	Open in IMG/M
3300010042\|Ga0126314_10436884	Not Available	946	Open in IMG/M
3300010042\|Ga0126314_11055666	Not Available	604	Open in IMG/M
3300010042\|Ga0126314_11235048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	559	Open in IMG/M
3300010042\|Ga0126314_11399658	Not Available	525	Open in IMG/M
3300010044\|Ga0126310_10340033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1048	Open in IMG/M
3300010044\|Ga0126310_10633582	Not Available	802	Open in IMG/M
3300010044\|Ga0126310_10645270	Not Available	795	Open in IMG/M
3300010044\|Ga0126310_11515096	Not Available	551	Open in IMG/M
3300010044\|Ga0126310_11574206	Not Available	542	Open in IMG/M
3300010044\|Ga0126310_11670218	Not Available	528	Open in IMG/M
3300010045\|Ga0126311_10539753	Not Available	917	Open in IMG/M
3300010045\|Ga0126311_10635234	Not Available	848	Open in IMG/M
3300010045\|Ga0126311_11081150	Not Available	659	Open in IMG/M
3300010045\|Ga0126311_11538099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	558	Open in IMG/M
3300010045\|Ga0126311_11866551	Not Available	510	Open in IMG/M
3300010124\|Ga0127498_1118642	Not Available	529	Open in IMG/M
3300010166\|Ga0126306_10422640	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300010166\|Ga0126306_10586249	Not Available	888	Open in IMG/M
3300010166\|Ga0126306_10631785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	855	Open in IMG/M
3300010166\|Ga0126306_10790944	Not Available	765	Open in IMG/M
3300010166\|Ga0126306_11458020	Not Available	567	Open in IMG/M
3300010166\|Ga0126306_11859916	Not Available	505	Open in IMG/M
3300010371\|Ga0134125_11464583	Not Available	744	Open in IMG/M
3300010373\|Ga0134128_10342715	Not Available	1670	Open in IMG/M
3300010375\|Ga0105239_11014725	Not Available	954	Open in IMG/M
3300010375\|Ga0105239_11057461	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300010375\|Ga0105239_13127091	Not Available	539	Open in IMG/M
3300010375\|Ga0105239_13427475	Not Available	516	Open in IMG/M
3300010399\|Ga0134127_13704195	Not Available	502	Open in IMG/M
3300010400\|Ga0134122_11835986	Not Available	639	Open in IMG/M
3300010401\|Ga0134121_12335493	Not Available	574	Open in IMG/M
3300011332\|Ga0126317_10578702	Not Available	782	Open in IMG/M
3300012212\|Ga0150985_101098594	Not Available	753	Open in IMG/M
3300012212\|Ga0150985_105405604	Not Available	2178	Open in IMG/M
3300012212\|Ga0150985_105807322	All Organisms → cellular organisms → Archaea	917	Open in IMG/M
3300012212\|Ga0150985_109309464	Not Available	1000	Open in IMG/M
3300012212\|Ga0150985_109797684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	1029	Open in IMG/M
3300012212\|Ga0150985_111564413	Not Available	2568	Open in IMG/M
3300012212\|Ga0150985_112480713	Not Available	616	Open in IMG/M
3300012212\|Ga0150985_113913453	Not Available	557	Open in IMG/M
3300012212\|Ga0150985_116140251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	648	Open in IMG/M
3300012212\|Ga0150985_116633432	Not Available	734	Open in IMG/M
3300012212\|Ga0150985_118510446	Not Available	646	Open in IMG/M
3300012212\|Ga0150985_119296701	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300012212\|Ga0150985_122843375	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012410\|Ga0134060_1502267	Not Available	592	Open in IMG/M
3300012469\|Ga0150984_103369820	Not Available	690	Open in IMG/M
3300012469\|Ga0150984_104626892	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300012469\|Ga0150984_107985544	Not Available	514	Open in IMG/M
3300012469\|Ga0150984_109818193	Not Available	671	Open in IMG/M
3300012469\|Ga0150984_111793870	Not Available	635	Open in IMG/M
3300012469\|Ga0150984_116177082	Not Available	996	Open in IMG/M
3300012469\|Ga0150984_117863129	Not Available	603	Open in IMG/M
3300012469\|Ga0150984_120534872	Not Available	642	Open in IMG/M
3300012469\|Ga0150984_121801124	Not Available	523	Open in IMG/M
3300012469\|Ga0150984_121910021	Not Available	936	Open in IMG/M
3300012957\|Ga0164303_11511989	Not Available	508	Open in IMG/M
3300012961\|Ga0164302_11896280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300012984\|Ga0164309_10343592	Not Available	1092	Open in IMG/M
3300013296\|Ga0157374_10749880	Not Available	991	Open in IMG/M
3300013297\|Ga0157378_11474465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300013306\|Ga0163162_12398233	Not Available	606	Open in IMG/M
3300013306\|Ga0163162_12462212	Not Available	598	Open in IMG/M
3300013308\|Ga0157375_13466405	Not Available	525	Open in IMG/M
3300014487\|Ga0182000_10487691	Not Available	570	Open in IMG/M
3300014488\|Ga0182001_10443156	Not Available	579	Open in IMG/M
3300014497\|Ga0182008_10349285	Not Available	784	Open in IMG/M
3300014745\|Ga0157377_11462785	Not Available	541	Open in IMG/M
3300014745\|Ga0157377_11490883	Not Available	537	Open in IMG/M
3300014968\|Ga0157379_11038400	Not Available	783	Open in IMG/M
3300014969\|Ga0157376_11235767	Not Available	776	Open in IMG/M
3300014969\|Ga0157376_12117093	Not Available	601	Open in IMG/M
3300014969\|Ga0157376_12224833	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300015372\|Ga0132256_102408356	Not Available	629	Open in IMG/M
3300017792\|Ga0163161_10240940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1406	Open in IMG/M
3300018465\|Ga0190269_11432099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	563	Open in IMG/M
3300018466\|Ga0190268_11268973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	618	Open in IMG/M
3300018875\|Ga0193608_1078599	Not Available	725	Open in IMG/M
3300019767\|Ga0190267_10078250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1240	Open in IMG/M
3300019767\|Ga0190267_10475499	Not Available	729	Open in IMG/M
3300019767\|Ga0190267_10933142	Not Available	599	Open in IMG/M
3300025901\|Ga0207688_10133286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1457	Open in IMG/M
3300025901\|Ga0207688_10844016	Not Available	580	Open in IMG/M
3300025927\|Ga0207687_11114887	Not Available	678	Open in IMG/M
3300025927\|Ga0207687_11492017	Not Available	581	Open in IMG/M
3300025931\|Ga0207644_10787776	Not Available	795	Open in IMG/M
3300025935\|Ga0207709_10749773	Not Available	785	Open in IMG/M
3300025936\|Ga0207670_10325181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerilata	1211	Open in IMG/M
3300025938\|Ga0207704_11618398	Not Available	556	Open in IMG/M
3300025961\|Ga0207712_11625233	Not Available	579	Open in IMG/M
3300025972\|Ga0207668_11118293	Not Available	707	Open in IMG/M
3300026023\|Ga0207677_12190591	Not Available	514	Open in IMG/M
3300026075\|Ga0207708_10926210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	755	Open in IMG/M
3300026118\|Ga0207675_100236659	Not Available	1763	Open in IMG/M
3300028381\|Ga0268264_10263143	Not Available	1608	Open in IMG/M
3300028381\|Ga0268264_10820681	Not Available	930	Open in IMG/M
3300028778\|Ga0307288_10297401	Not Available	642	Open in IMG/M
3300031091\|Ga0308201_10070422	Not Available	936	Open in IMG/M
3300031123\|Ga0308195_1032858	Not Available	691	Open in IMG/M
3300031995\|Ga0307409_101410772	Not Available	723	Open in IMG/M
3300032126\|Ga0307415_102036281	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.69%
Host-Associated	Host-Associated	42.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Plants	Host-Associated → Plants	41.76%
Aquatic	Environmental → Aquatic	0.55%
Human	Host-Associated → Human	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.84%
Freshwater	Environmental → Aquatic → Freshwater	0.55%
Digestive System	Host-Associated → Human → Digestive System	0.55%
Roots	Host-Associated → Plants → Roots	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.14%
Loam	Environmental → Terrestrial → Soil → Loam	6.04%
Sand	Environmental → Terrestrial → Soil → Sand	1.10%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.55%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.65%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.10%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.55%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.55%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.55%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	33.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.04%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	5.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.10%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.55%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.55%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.55%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10154452	2228664022	Soil	LKSLLIIAAVLAGDPATTDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR
INPhiseqgaiiFebDRAFT_1016728482	3300000364	Soil	AAVLAGDPATTDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQFRDALQR*
JGI11643J11755_117546401	3300000787	Soil	IIAAVLAGDPATTDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR*
JGI1027J12803_1040263942	3300000955	Soil	VKFILILAAVLAGDPDSTDPSLEVAAKLFDTQTDCEQAKAGSTGEGKGEIEGKQVLRIVGRCQELSPVDVQRLRDALQP*
C688J13580_10092702	3300001205	Soil	LKSLLIIAAVLAGDPATTDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR*
C688J18823_105706631	3300001686	Soil	VKFILILAAVLVGDPTSTDPSLEVVAKLFNTRADCEQAKAESTGEGKGEIEGKKVLRIVGRCQELSQDDVQQLKDALNR*
C688J18823_105792772	3300001686	Soil	LKXLLIIAAVLAGDPATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEQVQQLKDALQR*
C688J35102_1178287581	3300002568	Soil	LKSLLILAAVLAGDPATTDPSLEVLTKLFDTQVDCERVKTESTGEGKGEIKGKKVLRLVG
C688J35102_1195756991	3300002568	Soil	LKFILILAAVLTGDTTNTDPSLEVLTKLFNTRAECEQAKTKSTGEGEGEIEGKKVLRIVGRCQEL
C688J35102_1198219641	3300002568	Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNR*
C688J35102_1200384242	3300002568	Soil	LKYLLIIAAVLAGDSATTDPRLEVLTKLFDSPADCEQTKTESTGEGKGEIEGKKVLRIVGRCQELT
C688J35102_1206339473	3300002568	Soil	LKYLLILAAVLAGDPATTDPSLEVLTKLFDAQVDCERVKTESTGEGKGEIKGKKVLRLVG
Ga0062595_1010772763	3300004479	Soil	RRNAVKFILILAAVLAGDPDSTDPSLEVAAKLFDTQTDCEQAKAGSTGEGKGEIEGKQVLRIVGRCQELSPVDVQRLRDALQP*
Ga0062595_1014207831	3300004479	Soil	AVLAGDPASTDPSLEVVASLFDTQADCEQAKAGSTGEGKGEIEGKQVLRIVGRCQELSPVEVQRLRGALQP*
Ga0058860_121645681	3300004801	Host-Associated	VKFILILAAVLAGDPASTDPSLEVVAKLFDTQADCDREKAASTGEGKGKIGGKQVLRIVGRCQELSPEEVRQLRDALQP*
Ga0062594_1027463301	3300005093	Soil	VKFILILAAVLAGDPASTDPSLEAVAKLFDTQADCERAKAGSTGEGKGQIDGKQVLRIVGRCQELDPKEVQQLRDALQP*
Ga0070670_1007984671	3300005331	Switchgrass Rhizosphere	PLEVHSDHRGCLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGEGEIEGKKVLRLVGRCQELNPDEVQHLKDALNR*
Ga0068868_1005584081	3300005338	Miscanthus Rhizosphere	LKFILILAAVLAGNPAQTDPSLEVLPKLFDSQGECEQSRTKSTGEGKGEIEGRKVLRIVGRCQQLTPEEVQQLKDALTP*
Ga0070692_111182851	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTRDEVQQLKDALNR*
Ga0070668_1001609252	3300005347	Switchgrass Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFNTRDECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNR*
Ga0070668_1015368942	3300005347	Switchgrass Rhizosphere	VTWSSPLKYILIIAAVLAGNASNTDPHLELVTKVFDSQADCERAKTRSTGEGKGEIEGKRVLRIVGRCQELTPEEVQQLRAALER*
Ga0070668_1018700031	3300005347	Switchgrass Rhizosphere	VLQDAKETPLKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDSLNR*
Ga0070673_1023119893	3300005364	Switchgrass Rhizosphere	VKFILILAAVLAGDPASTDPSLEVVAKVFGTQADCERAKAGSTGEGKGEIDGKQVLR
Ga0070662_1003418341	3300005457	Corn Rhizosphere	DPANTDPSLEVLTKLFDSRAECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELSPNDVQQLKDALNR*
Ga0068867_1023575171	3300005459	Miscanthus Rhizosphere	LKFILILAAVLAGDPAQTDPSLEVLPKLFDSQGECEQSRTKSTGEGKGEIEGRKVLRIVGRCQQLTPEEVQQLKDALTP*
Ga0068857_1022166262	3300005577	Corn Rhizosphere	LKFILILAAVLAGNPAQTDPSLEVLPKLFDSQGECEQSRTKSTGEGKGEIEGRKVLRIVGRCQQLTPEDVQQLKDALTP*
Ga0068860_1000949915	3300005843	Switchgrass Rhizosphere	VKFILILAAVLAGDPASTDPSLEVVAKLFDTQADCDREKAASTGEGKGKIEGKQVLRIVGRCQELSPEEVRQLRDALQP*
Ga0082029_15131281	3300006169	Termite Nest	LKYILIIAAVLAGDPAKTDPSLELVAKVFDTQADCERAKAGSTGEGKGEIEGKPVLRIVGRCQELTSGQVQQLRDALQQ*
Ga0097621_1017536591	3300006237	Miscanthus Rhizosphere	LAAVLAGDPASTDPSLEVVAKLFDTQADCERAKAGSTGEGKGQIDGKQVLRIVGRCQELDPKEVQQLRDALQP*
Ga0079219_102188932	3300006954	Agricultural Soil	VKFILILAAVLAGDPASTDPSLEVVAKLFDTQADCERAKAGSTGEGRGQIGGKQVLRIVGRCQELSPGEVQQLRDALQP*
Ga0079219_111317172	3300006954	Agricultural Soil	VKFILILAAVLAGDPASTDPSLEVVSKFFGTQADCERAKAGSTGEGKGEIDGKQVLRIVGRCQELGPEEVQQLRDALQP*
Ga0105679_101457372	3300007790	Soil	LKYVLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERVKTESTGEGKGEIEGRKVLRIVGRCQELTLEDTQQLRDALQR*
Ga0105250_100888313	3300009092	Switchgrass Rhizosphere	DPANTDPILEVLTRIFETQAECEQAKTKSTGEAQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0105245_110249622	3300009098	Miscanthus Rhizosphere	VTEEISLKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELSPNDVQQLKDALNR*
Ga0105245_117855161	3300009098	Miscanthus Rhizosphere	AAVLTAEPANTKPSLEVLTKLFDSRAECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0105245_131922581	3300009098	Miscanthus Rhizosphere	VKFILILAAVLAGDPASTDPSLEAVAKLFDTQADCERAKAGSTGEGKGEIDGKQVLRIVGRCQELSPEQVQQLRNALKP*
Ga0105247_114316281	3300009101	Switchgrass Rhizosphere	AVLAGNASNTDPHLELVTKVFDSQADCERAKTRSTGEGKGEIEGKRVLRIVGRCQELTPEEVQQLRAALQP*
Ga0105248_108181292	3300009177	Switchgrass Rhizosphere	LKYILIIAAVLAGNASNTDPHLELVTKVFYSQADYKRAKTRSTGEGKGEIEGKRVLRIVGRCQELTPEEVQQLRAALQP*
Ga0105248_126517161	3300009177	Switchgrass Rhizosphere	VKETPLKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTLNEVQQLKDALSR*
Ga0105249_118367981	3300009553	Switchgrass Rhizosphere	VKFVLILAAVLAGDPASTDPNLEVITKLFNTQADCDREKAASTGEGKGKIEGKQVLRIVGRCQELSPEEVRQLRDALQP*
Ga0105249_125291541	3300009553	Switchgrass Rhizosphere	GQRGGARLIQDATEEISLKFILIIAAVLTGDPANTDPSLEVLTKLFNTRDECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPTEVQQLKDALNR*
Ga0126307_103694852	3300009789	Serpentine Soil	LKYVFIIAAGLAGDPATTDPRLELLTRLFDTQTDCERVKAGSTGEGKGEIEGRKVLRLVGRCHGMTLKDTQQLRDALQP*
Ga0126307_104916942	3300009789	Serpentine Soil	VEETSLKFILIMAAVLTGDPANTDPSLEVLPKLFESQAACEQAKMKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALNR*
Ga0126307_105740752	3300009789	Serpentine Soil	LKYLLIIAAVLAGDPATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTSEEVQQLRDALQR*
Ga0126307_115358481	3300009789	Serpentine Soil	LKSLLIIAAVLAGDPATTDPSLELLTKLFDTQADCERVRTESTGEGKGEIEGKKVLRIVG
Ga0126313_102739163	3300009840	Serpentine Soil	LKYLLIIAAVLTGDPATTDPRLELLTWLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTSEEVQQLRDALQR*
Ga0126313_103502353	3300009840	Serpentine Soil	VEETSLKFILIMAAVLTGDPANTDPSLEVLPKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALNR*
Ga0126313_103765271	3300009840	Serpentine Soil	LRYLLIIAAVLAGDPATTDPGLEVLTKLFDTQADCERVKTESTGEGKGEIEGRKVLRIVGRCQELTPEEVQQLRDALNR*
Ga0126313_104356041	3300009840	Serpentine Soil	VPPVGQRGAARLIQDAKETPLKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQSKEKSTGEGAGQIEGKKVLRIVGRCQELTPNEVQQLKDALNQ*
Ga0126313_106378742	3300009840	Serpentine Soil	VQVTQERTEQPLKYLLILAAVLAGDPATTDPSLEVLTKLFDTQADCERVKTESTGEGKGEIEGKKVLR
Ga0126305_102239811	3300010036	Serpentine Soil	LKYLLIIAAVLAGDPATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGRKVLRIVGRCQELTPEEVQQLRDALQR*
Ga0126305_104922021	3300010036	Serpentine Soil	LKYLLIIAAVLAGEPATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGQKVLRIVGRCQALTPEEIQQLRGALSR*
Ga0126305_109423761	3300010036	Serpentine Soil	LKYLLILAAVLAGDPATTDPSLEVLTKLFDTQADCEQSKTKSTGEGKGEIEGKKVLRLVGRCQEL
Ga0126305_111968992	3300010036	Serpentine Soil	LKYLLILAAVLAGDPATTDPSLEVLTKLFDTQADCERVKTESTGEGKGEIEGKKVLRLVGRCQALTPEEVQQLRDALSR*
Ga0126305_112125981	3300010036	Serpentine Soil	LKYVFIIAAGLAGDPATTDPRLELLTRLFDTQTDCERVKAGSTGEGKGEIEGRKVLRLVGRCHGMTLEDT
Ga0126304_101911412	3300010037	Serpentine Soil	LKYLLIIAAVLAGDPATTDPSLEVLTKLFDSQGDCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR*
Ga0126304_102671621	3300010037	Serpentine Soil	LKYLLIIAAVLAGEPATTNPHLELLTRLFDTQADCERVKTASTGEGKGEIEGQKVLRIVGQCQELIPEEVQQLRD
Ga0126304_102774911	3300010037	Serpentine Soil	VEETSLKFILIMAAVLTGDPSNTDPSLEVLPKLFESQAACEQAKMKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALNP*
Ga0126304_106747591	3300010037	Serpentine Soil	TETPLKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGEGEIEGKKVLRLVGRCQALAPDEVQQLKDALNR*
Ga0126304_108507772	3300010037	Serpentine Soil	LKSLLIIAAVLAGDPATTDPSLEVLTRLFDTQADCERVRTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR*
Ga0126315_102695901	3300010038	Serpentine Soil	LKSLLIIAAVLAGDPATTDPSLEVLTRLFDTQADCERVRTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALNR*
Ga0126315_103141053	3300010038	Serpentine Soil	LKSLLILAAVLAGDPATTDPSLEVLTNLFDTQADCERTKTGSTGEGKGEIEGKKVLRLVGRCQELTPEEVQQLRDALQR*
Ga0126315_103863302	3300010038	Serpentine Soil	VEETSLKFILIMAAVLTGDPANTDPSLEVLPKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQELTPEDVQQLRDALNR*
Ga0126315_106488631	3300010038	Serpentine Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQVKTKSTGEGEGDIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0126309_102596852	3300010039	Serpentine Soil	LKYLLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERVRTESTGEGKGEIEGRKVLRLVGRCQKLTPEEVQQLRDALHR*
Ga0126309_104942141	3300010039	Serpentine Soil	LKYLLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERVRTESTGEGKGEIEGKKVLRIVGRCQELTPEEVRQLRDALS
Ga0126309_105588251	3300010039	Serpentine Soil	GQRGATRLIQDATEETLLKFILILGAVLTGDPANTDPSLEAFTKLFNTRAECEQAKTKSTGEGEGDIEGKKVLRIVGRCQELTPDEVQQLKDALNR*
Ga0126309_109242052	3300010039	Serpentine Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQSKEKSTGEGAGQIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0126308_101436533	3300010040	Serpentine Soil	VVPPAGQRGAARLIQDTTEETPLKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGEGEIEGKKVLRLVGRCQALAPDEVQQLKDALNR*
Ga0126308_102749621	3300010040	Serpentine Soil	LKYLLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERVKTESTGEGKGEIGGKKVLRLVGRCQALTPEEVQQLRDALQR*
Ga0126308_103690542	3300010040	Serpentine Soil	VEETSLKFILIMAAVLMGDPANTDPSLEVLPKLFESQAACEQAKMKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALNR*
Ga0126308_110719781	3300010040	Serpentine Soil	LKSLLIIAAVLAGDPTTTDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR*
Ga0126312_100421206	3300010041	Serpentine Soil	LKYLLILAAVLAGDPATTDPSLEGLTKLFDTQVDCERVKTESTGEGKGEIKGKKVLRLVGRCQALTPEEVQQLRTRSSVEERLPHG*
Ga0126312_101719721	3300010041	Serpentine Soil	LKYVLIIAAVLTGDPATTDPRLELLTRIFDTQADCERVKTESTGEGKGEIEGRKVLRIVGRCHGMTLEDTQQLRDALQP*
Ga0126312_103203421	3300010041	Serpentine Soil	LRYLLIIAAVLAGDPATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEDTQQLRDALQR*
Ga0126312_107817041	3300010041	Serpentine Soil	LKFILIIAAVLTGDPAQTDPSLEVLPKLFDSRAECEQSKTKSTGEGQGEIEGKAVLRIVGRCQQLTPEDVQQLRDALNR*
Ga0126312_109642232	3300010041	Serpentine Soil	LKYLLILAAVLAGDPATTDPSLEVLTKLFDTQADCEQSKTKSTGEGKGEIEGKKVLRIVGRCQELTREQVQQLKDALQH*
Ga0126312_111813141	3300010041	Serpentine Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGEGEIEGKKVLRIVGRCQELTPNEVQQLKDALNQ*
Ga0126312_112451701	3300010041	Serpentine Soil	LKYLLIIAAVLAGDPATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGKRCCALWAGARS*
Ga0126314_103317803	3300010042	Serpentine Soil	LKSLLIIAAVLAGDPATTDPRLELLTRLFDIQADCERVRTESTGEGKGEIEGKKVLRIVGRCQELT
Ga0126314_104223462	3300010042	Serpentine Soil	VEETSLKFILIMAAVLTGDPANTDPSLEVLPKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALNP*
Ga0126314_104368841	3300010042	Serpentine Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGEGDIEGKKVLRIVGRCQELSPNEVQQLKDALNQ*
Ga0126314_110556662	3300010042	Serpentine Soil	VKFILILAAVLAGDPDSTDPSLEVAAKLFDTQTDCEQAKAGSTGEGKGEIEGKQVLRIVGRCQELSPVEVQRLRDALQP*
Ga0126314_112350482	3300010042	Serpentine Soil	LKSLLILAAVLAGDPATTDPSLEVLTKLFDTQVDCERVKMESTGEGKGEIKGKKVLRLVGRCQALTPEEVQQLRDALQR*
Ga0126314_113996581	3300010042	Serpentine Soil	VVPPGGQRGAARLIQDTKETPLKFILILAAVLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGEGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0126310_103400331	3300010044	Serpentine Soil	LKYLLIIAAVLAGDPATTDLSLEVLTKLFDTQADCERTKAESTGEGKGEIEGKKVLRLVGRCQELTPEEVQQLRDALQR*
Ga0126310_106335821	3300010044	Serpentine Soil	LKFILIIAAVLTGDPANTDPSLEVLAKLFNTRAECEQAKTKSTGEGEGDIEGKKVLRIVGRCQELTP
Ga0126310_106452701	3300010044	Serpentine Soil	VPSAGQRGPARLIQDATEETRLKFILIIGAVLTGDPANTDPSLEALTKLFNTRAECEQAKTKSTGEGEGEIEGKKVLRLVGRCQELTPNEVQQLKDALNR*
Ga0126310_115150961	3300010044	Serpentine Soil	LKYLLIIAAVLAGDPATTDPSLEVLPKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQQLTPE
Ga0126310_115742061	3300010044	Serpentine Soil	LKFILIIAAVLTGDPASTDPSLEVLTKLFNTRDECEQAKTKSTGEGKGEIEGKK
Ga0126310_116702181	3300010044	Serpentine Soil	LKFILILAAVLTGDPAQTDPSLEVLPKLFDSQGECEQSKTKSTGEGTGEIEGRKVLRIVGRCQQLTPEEVQRLKDALTP*
Ga0126311_105397531	3300010045	Serpentine Soil	LKYLLILAAVLAGDPATTDPSLEDLTKLFDTQVDCERVKTESTGEGKGEIKGKKVLRLVGRCQALTPE
Ga0126311_106352342	3300010045	Serpentine Soil	LKYLLIIAAVLAGEPATTDPRLELLTRLFDTQADCERVKTASTGEGTGEIEGQKVLRIVGRCQALTPEEVQRLRDALSR*
Ga0126311_110811502	3300010045	Serpentine Soil	LKFILILAAVLTGDPANTDPSLEALTKLFNTRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNQ*
Ga0126311_115380991	3300010045	Serpentine Soil	LCRRCRNGRSSAWKFILIIAAVLTGDTANTDPSLEVLPKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALQR*
Ga0126311_118665511	3300010045	Serpentine Soil	LKSLLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTP
Ga0127498_11186421	3300010124	Grasslands Soil	VTEEISLKFILILAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0126306_104226402	3300010166	Serpentine Soil	APSGRYRAAWLIQKAVEETSLKFILIMAAVLMGDPANTDPSLEVLPKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALNP*
Ga0126306_105862493	3300010166	Serpentine Soil	PATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGQCQELTSEEVQQLRDALQR*
Ga0126306_106317853	3300010166	Serpentine Soil	LRYLLIIAAVLAGDPATTDPSLELLTKLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR*
Ga0126306_107909442	3300010166	Serpentine Soil	LKYLLIIAAVLAGEPATTDPRLELLTRLFETQADCERVKTESTGEGKGEIEGQKVLRIVGRCQELTPEEVQQLRDALSR*
Ga0126306_114580202	3300010166	Serpentine Soil	LKSLLIIAAVLAGDPATTDPRLELLTRLFDTQADCERVRTESTGEGKGEIEGRKMLRIVGRCHGMTLEDTQQLRDALQP*
Ga0126306_118599161	3300010166	Serpentine Soil	LKSLLIIAAVLAGDPATTDPRLEVLTKLFDTQADCERVRTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQIRDALSR*
Ga0134125_114645831	3300010371	Terrestrial Soil	LKFILILAAVLAGNPAQTDPSLEVLPKLFDSQGECEQSRTKSTGEGKGEIEGRKVLRIIGRCQQLTPEDVQRLKDALTP*
Ga0134128_103427152	3300010373	Terrestrial Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGEGEIEGKKVLRIVGRCQELSPNEVHQLKDALNQ*
Ga0105239_110147252	3300010375	Corn Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNR*
Ga0105239_110574612	3300010375	Corn Rhizosphere	VKFILILAAVLAGDPASTDPSLEAVAKLFDTQADCERAKAGSTGEGKGQIDGKQVLRIVGRCQELSPEQVQQLRDALKP*
Ga0105239_131270911	3300010375	Corn Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEV
Ga0105239_134274752	3300010375	Corn Rhizosphere	LKSLLIIAAVLAGDPAATDPRLELLTRLFDSQADCERVKTESTGEGKDEIEGKTVLRIVGRCQELTPEEVQQLRDALYR*
Ga0134127_137041951	3300010399	Terrestrial Soil	MRRRRPPLKFILIIAAVLIGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTLNEVQQLKDALSR*
Ga0134122_118359861	3300010400	Terrestrial Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNQ*
Ga0134121_123354931	3300010401	Terrestrial Soil	LKYILIIAAVLAGNASNTDPHLELVTKVFDSQADCERAKTRSTGEGKGEIEGKRVLRIVGRCQELTPEEVQQLRAALQP*
Ga0126317_105787022	3300011332	Soil	LKSLLIIAAVLAGDPAATDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR*
Ga0150985_1010985942	3300012212	Avena Fatua Rhizosphere	AAVLAGDSATTDPRLEVLTKLFDSPADCEQTKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALNR*
Ga0150985_1054056043	3300012212	Avena Fatua Rhizosphere	LKYLLIIAAVLAGEPATTDPRLELLTRLFDTQADCERVKTESTGEGKGEIEGQKVLRIVGRCQELTPEEVQQLRDALSR*
Ga0150985_1058073222	3300012212	Avena Fatua Rhizosphere	LAGDPATTDPRLELLTRLFDSQADCERVKTASTGEGKGEIEGQKVLRIVGRCQELTPEEVQQLRDALQR*
Ga0150985_1093094641	3300012212	Avena Fatua Rhizosphere	LKYILIVAAVLAGDAANTDPHLELVTKLFDSQAECDRAKTASTGEGKGEIEGKRVLRIVGRCQELTPDEIQRLRAALQP*
Ga0150985_1097976842	3300012212	Avena Fatua Rhizosphere	LKYILIIAAVLAGNASNTDPHLELVTKIFDSQADCERAKTRSTGEGKGEIEGKRVLRIVGRCQELTPEDVQQLRAALQP*
Ga0150985_1115644132	3300012212	Avena Fatua Rhizosphere	MIVKYILIIAAVLAGDAGATDPRLELVTKLFDSQAECERAKTASTGEGKGEIEGKRVLRIVGRCQELTPDEIQQLRAALQP*
Ga0150985_1124807131	3300012212	Avena Fatua Rhizosphere	VLTGDPANTDPSLEVLTKLFNTRAECEQVKTKSTGEGEGDIEGKKVLRIVGRCQELTRDEVQQLKDALNQ*
Ga0150985_1139134531	3300012212	Avena Fatua Rhizosphere	MIVKYILIIAAVLAGDAATTDPRLELVTKLFDSQADCERAKTASTGEGKGDIEGKRVLRIVGRCQELTPEEIQQLRAALQP*
Ga0150985_1161402511	3300012212	Avena Fatua Rhizosphere	LRYLLIIAAVLAGDPVTTDPSLEVLTKLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEDTQQLRDALQR*
Ga0150985_1166334321	3300012212	Avena Fatua Rhizosphere	VLQDATEETSLKFILILAAVLTGDPANTDPSLEILTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0150985_1185104461	3300012212	Avena Fatua Rhizosphere	LKSLLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERTKAESTGEGKGEIEGKKVLRLVGRCQELTPEEVQQLRDALQR*
Ga0150985_1192967011	3300012212	Avena Fatua Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKPFNTRDECEQAKTKSTGEGEGDIEGKKVLRIVGRCQELAPDEVQQLKDALNQ
Ga0150985_1228433752	3300012212	Avena Fatua Rhizosphere	LKFILILAAVLVGDPAQIDPSLEVLPKLFDSQAECEQSRTKSTGEGKGEIEGRKVLRIIGRCQQLTPEEVQRLKDALTP*
Ga0134060_15022672	3300012410	Grasslands Soil	GLSLCRLVPPAGQRGAARLLQDAKEPSLKFILILAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNR*
Ga0150984_1033698201	3300012469	Avena Fatua Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDTRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQE
Ga0150984_1046268921	3300012469	Avena Fatua Rhizosphere	LRYLLIIAAVLAGDPATTDPRLEVLTKLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEDTQQLRDALQR*
Ga0150984_1079855442	3300012469	Avena Fatua Rhizosphere	LKYILIIAAVLAGNASTTDPHLELVTKAFDSQADCERAKMRSTGEGKGEIEGKRVLRIVGRCQELTPEEVQQLRAALQP*
Ga0150984_1098181931	3300012469	Avena Fatua Rhizosphere	VLQDATEETSLKFILILAAVLTGDTTNTDPSLEVLTKLFNTRAECEQVKTKSTGEGEGDIEGKKVLRIVGRCQELTPDEVHQLKDALNQ*
Ga0150984_1117938701	3300012469	Avena Fatua Rhizosphere	LKSLLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERGRTESTGEGKGEIEGKKVLRLVGRCQELTPEEVQQLRDALQR*
Ga0150984_1161770822	3300012469	Avena Fatua Rhizosphere	VTEEISLKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR*
Ga0150984_1178631292	3300012469	Avena Fatua Rhizosphere	FILILAAVLAGDPDSTDPSLEVAAKLFDTQTDCEQAKAGSTGEGKGEIEGKQVLRIVGRCQELSPVEVQRLRDALQP*
Ga0150984_1205348721	3300012469	Avena Fatua Rhizosphere	MIVKYILIIAAVLAGDAATTDPHLELVTKVFDSQAECERAKTASTGEGKGEIEGKRVLRIVGRCQELTPEEIQQLRAALQP*
Ga0150984_1218011241	3300012469	Avena Fatua Rhizosphere	MIVKYILVIAAVLAGDASTTDPRLELVTKLFDSQAECERAKTASIGEGKGEIEGKRVLRIVGRCQELTPEEIQQLRAALQR*
Ga0150984_1219100211	3300012469	Avena Fatua Rhizosphere	LKYILILAAVLAGDAASADPSLEVVTKVFDTQAECERAKAGSTGEGKGEIEGKPVLRIVGRCQELTPEDIQQLRDALQR*
Ga0164303_115119891	3300012957	Soil	VFCGEFDSSRRYQDTTEETCLKFILILAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTLDEVQQLKDALNR*
Ga0164302_118962801	3300012961	Soil	MIVKYILIIAAVLAGDAATTDPRLEPVTKLFDSQAECERAKTASTGEGKGEIEGKRVLRIVGRCQELTPEEVQQLRAALER*
Ga0164309_103435923	3300012984	Soil	LKYILIIAAVLAGDAATTDPRLELVTKLFDSQADCERAKTASTGEGKGEIEGKRVLRLVGRCQELTPEEVQQLRAALER*
Ga0157374_107498802	3300013296	Miscanthus Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELTPTEVQQLKDALNR*
Ga0157378_114744652	3300013297	Miscanthus Rhizosphere	AGDAGTTDPRLELVTKLFDSQAECERAKTASTGEGKGEIEGKRVLRIVGRCQELTPDEIQQLRAALQP*
Ga0163162_123982332	3300013306	Switchgrass Rhizosphere	LKYILIIAAVLAGDAATTDPRLELVTKLFDSQAECERAKTASTGEGKGEIEGKRVLRIVGRCQELTPEEVLQLRAALER*
Ga0163162_124622121	3300013306	Switchgrass Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTLDEVQQLKDALSR*
Ga0157375_134664051	3300013308	Miscanthus Rhizosphere	DPASTDPSLEVVAKLFDTQADCERAKAGSTGEGKGEIEGKRVLRIVGRCQELSPEEVRQLRDALQP*
Ga0182000_104876911	3300014487	Soil	TGLSLCRVVPPVGQRGAARLLQDATEETPLKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRLVGRCQALTPNEVQQLKDALNR*
Ga0182001_104431561	3300014488	Soil	VPPAGQRGDTRLIQDATEEISLKFILILAAVLTGDPASTDPSLEVLTKLFDSRAECEQAKTKSTGEGEGEIEGKKVLRIVGRCQELAPDGVQQLKDALNR*
Ga0182008_103492852	3300014497	Rhizosphere	VTEEISLKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNQ*
Ga0157377_114627852	3300014745	Miscanthus Rhizosphere	VKFILILAAVLAGDPASTDPSLEVVAKLFDTQADCERAKAGSTGEGKGEIDGKQVLRIVG
Ga0157377_114908831	3300014745	Miscanthus Rhizosphere	VTEEISLKFILILAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPTEVQQLKDALNR*
Ga0157379_110384002	3300014968	Switchgrass Rhizosphere	SVELRGRPRKQRRHALKFILILAAVLAGDPAQTDPSLEVLPKLFDSQGECEQSRTKSTGEGKGEIEGRKVLRIVGRCQQLTPEEVQQFKDALTP*
Ga0157376_112357671	3300014969	Miscanthus Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPDGVQQLKDALNR*
Ga0157376_121170931	3300014969	Miscanthus Rhizosphere	MIVKYILIIAAVLAGDAGTTDPRLELVTKLFDSQAECERAKTASTGEGKGEIEGKRVLRIVGRCQELTPEEIQQLRAALQP*
Ga0157376_122248331	3300014969	Miscanthus Rhizosphere	VKFILILAAVLAGDPASTDPSLEAVAKLFDTQADCERAKAGSTGEGKGQIDGKQVLRIVGRCQELDPKEVQ
Ga0132256_1024083561	3300015372	Arabidopsis Rhizosphere	LKFILILAAVLAGDPAQTDPSLEVLPKLFDSQGECEQSRTKSTGEGKGEIEGRKVLRIVGRCQQLTPEEVQQFKDALTP*
Ga0163161_102409401	3300017792	Switchgrass Rhizosphere	KETPLKFILILAAVLTGDPASTDPSLEVLTKLFNTRDECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELSPNDVQQLKDALNR
Ga0190269_114320991	3300018465	Soil	LKYLLIIAAVLAGDPATTDPRLELLTKLFDTQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALNR
Ga0190268_112689731	3300018466	Soil	LKYLLILAAVLAGDPATTDPSLEVLTKLFDTQADCERVKTESTGEGKGEIEGKKVLRLVGRCQALTPEEVQQLRDALQR
Ga0193608_10785991	3300018875	Soil	LKYLLIIAAVLAGDPATTDPRLELLTRLFDTQADCERVKTASTGEGKGEIEGKKVLRIVGRCQELTPEDIQQLRDALQQ
Ga0190267_100782502	3300019767	Soil	LKYLLIIAAVLAGDPATTDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR
Ga0190267_104754991	3300019767	Soil	LKFILIIAAVLTGDPANTDPSLEVLTKLFNTRAECEQSKEKSTGEGAGQIEGKKVLRIVGRCQELTPNEVQQLKDALNR
Ga0190267_109331422	3300019767	Soil	LKFILIMAAVLTGDPANTDPSLEVLPKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALNR
Ga0207688_101332861	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNDVQQLKDALNR
Ga0207688_108440161	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LKFILILAAVLTGDPASTDPSLEVLTKLFNTRDECEQAKTKSTGEGKGEIEGKKVLRIVGRCQELTRGEVQQLK
Ga0207687_111148872	3300025927	Miscanthus Rhizosphere	LKFILILAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNR
Ga0207687_114920172	3300025927	Miscanthus Rhizosphere	VKFILILAAVLAGDPDSTDPSLEVAAKLFDTQADCERAKAGSTGEGKGEIDGKQVLRIVGRCQELDPKEVQQLRDALQP
Ga0207644_107877761	3300025931	Switchgrass Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTRDEVQQLKDALNR
Ga0207709_107497732	3300025935	Miscanthus Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNR
Ga0207670_103251812	3300025936	Switchgrass Rhizosphere	LKFILILAAVLTGDPANTDPSLEVLTKLFNTRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNDVQQLKDALNR
Ga0207704_116183981	3300025938	Miscanthus Rhizosphere	LKFILILAAVLTGDPASTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRC
Ga0207712_116252332	3300025961	Switchgrass Rhizosphere	MSLKFILILAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTLDEVQQLKDALSR
Ga0207668_111182931	3300025972	Switchgrass Rhizosphere	VLQDAKETPLKFILILAAVLTGNPASTDPSLEVLTKLFNTRDECEQVKTKSTGEGQGEIEGKKVLRIVGRCQELSPNEVQQLKDALNR
Ga0207677_121905911	3300026023	Miscanthus Rhizosphere	VKFILTLAAVLAGDPASTDPSLEVVTKVFDTQADCERAKARSTGEGKGEIEGKQVLRIVGRCQELDPKEVQQLRDALQP
Ga0207708_109262101	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LKFILILAAVLTGDPASTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELSPNDVQQLK
Ga0207675_1002366592	3300026118	Switchgrass Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKPFNTRDECEQAKTKSTGEGEGEIEGKKVLRIVGRCQELSPNDVQQLKDALNR
Ga0268264_102631432	3300028381	Switchgrass Rhizosphere	LKFILIIAAVLTGDPANTDPSLEVLTKLFDSRAECEQAKTKSTGEGQGEIEGKKVLRIVGRCQELTPNEVQQLKDALNR
Ga0268264_108206813	3300028381	Switchgrass Rhizosphere	VKFILILAAVLAGDPASTDPSLEVVAKLFDTQADCDREKAASTGEGKGKIEGKQVLRIVGRCQELSPEEVRQLRDALQP
Ga0307288_102974012	3300028778	Soil	VKFILILAAVLAGDPDSTDPSLEVAAKLFDTQTDCEQAKAGSTGEGKGEIEGKQVLRIVGRCQELSPVDVQRLRDALQP
Ga0308201_100704222	3300031091	Soil	LCGSRKRRSSPLKSLLIIAAVLAGDPATTDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALLR
Ga0308195_10328582	3300031123	Soil	LKYLLIIAAVLAGDPAATDPRLELLTRLFDSQADCERVKTESTGEGKGEIEGKKVLRIVGRCQELTPEEVQQLRDALQR
Ga0307409_1014107722	3300031995	Rhizosphere	LKSLLIIAAVLAGDPATTDPSLEVLTKLFDTQADCERVKTESTGEGKGEIEGKKVLRLVGRCQELT
Ga0307415_1020362812	3300032126	Rhizosphere	LKYLLILAAVLAGDPATTDPSLEALTKLFESQAACEQAKTKSTGEGQGEIEGKTVLRIVGRCQQLTPEDVQQLRDALQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031642

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences