Metagenome Family F032013

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F032013
Family Type	Metagenome
Number of Sequences	181
Average Sequence Length	49 residues
Representative Sequence	MKRALTGLASVGILAVTVGVETANAQSYRRYGPARTYTSQAYTPQS
Number of Associated Samples	119
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.20 %
% of genes near scaffold ends (potentially truncated)	55.80 %
% of genes from short scaffolds (< 2000 bps)	49.17 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (55.801 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.044 % of family members)
Environment Ontology (ENVO)	Unclassified (40.331 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.801 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.54% β-sheet: 0.00% Coil/Unstructured: 59.46%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF14534	DUF4440	11.60
PF08530	PepX_C	4.42
PF00753	Lactamase_B	3.87
PF02566	OsmC	3.31
PF12680	SnoaL_2	1.66
PF00072	Response_reg	1.10
PF02371	Transposase_20	1.10
PF03713	DUF305	1.10
PF04311	DUF459	1.10
PF07883	Cupin_2	1.10
PF01977	UbiD	1.10
PF12697	Abhydrolase_6	1.10
PF02617	ClpS	1.10
PF03401	TctC	0.55
PF08028	Acyl-CoA_dh_2	0.55
PF12695	Abhydrolase_5	0.55
PF10129	OpgC_C	0.55
PF00027	cNMP_binding	0.55
PF11319	VasI	0.55
PF05199	GMC_oxred_C	0.55
PF09335	SNARE_assoc	0.55
PF08450	SGL	0.55
PF00872	Transposase_mut	0.55
PF02129	Peptidase_S15	0.55
PF00239	Resolvase	0.55
PF02518	HATPase_c	0.55
PF13147	Obsolete Pfam Family	0.55
PF13404	HTH_AsnC-type	0.55
PF01266	DAO	0.55
PF03928	HbpS-like	0.55
PF09954	DUF2188	0.55
PF12833	HTH_18	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG2936	Predicted acyl esterase	General function prediction only [R]	4.42
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	3.31
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	3.31
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	1.10
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	1.10
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	1.10
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	1.10
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.10
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.55
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.55
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.55
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.55
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.55
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.55
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.55
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.55
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.55
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.55
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
All Organisms	root	All Organisms	44.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
cellular organisms	root	All Organisms → cellular organisms	43.65 %
Viruses	superkingdom	All Organisms → Viruses	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.39 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.18 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	14.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.52 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.66 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.10 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.55 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.66 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.55 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.55 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.66 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.55 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.55 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10007483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1008488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1667	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1050330	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1014228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1041359	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1084288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10135755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1008013	All Organisms → cellular organisms → Bacteria → Proteobacteria	1496	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1027253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1008607	All Organisms → cellular organisms → Bacteria → Proteobacteria	1838	Open in IMG/M
3300000953\|JGI11615J12901_11354301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300000955\|JGI1027J12803_102208452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300002245\|JGIcombinedJ26739_100257471	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300004267\|Ga0066396_10019442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300004633\|Ga0066395_10841894	Not Available	552	Open in IMG/M
3300005332\|Ga0066388_102949144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	869	Open in IMG/M
3300005356\|Ga0070674_101965404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300005468\|Ga0070707_101732435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	592	Open in IMG/M
3300005556\|Ga0066707_10485609	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005713\|Ga0066905_101994881	Not Available	538	Open in IMG/M
3300005764\|Ga0066903_100222797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2862	Open in IMG/M
3300005764\|Ga0066903_101346225	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300005764\|Ga0066903_107648867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005764\|Ga0066903_108497962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300005764\|Ga0066903_108801950	Not Available	512	Open in IMG/M
3300006172\|Ga0075018_10490772	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006175\|Ga0070712_101163247	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006854\|Ga0075425_100836897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1054	Open in IMG/M
3300009100\|Ga0075418_10178728	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300009147\|Ga0114129_13193354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300009792\|Ga0126374_10711103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	757	Open in IMG/M
3300010047\|Ga0126382_10257617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1283	Open in IMG/M
3300010047\|Ga0126382_12540652	Not Available	500	Open in IMG/M
3300010337\|Ga0134062_10498424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300010358\|Ga0126370_10093161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2062	Open in IMG/M
3300010358\|Ga0126370_11140878	Not Available	721	Open in IMG/M
3300010359\|Ga0126376_11967121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300010361\|Ga0126378_13314241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300010362\|Ga0126377_12559340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300010366\|Ga0126379_11996872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300010376\|Ga0126381_102700483	Not Available	710	Open in IMG/M
3300010376\|Ga0126381_103038468	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010398\|Ga0126383_13547063	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012200\|Ga0137382_11353887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300012205\|Ga0137362_10255241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1515	Open in IMG/M
3300012211\|Ga0137377_10127140	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300012211\|Ga0137377_10403476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1305	Open in IMG/M
3300012349\|Ga0137387_10800525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	682	Open in IMG/M
3300012948\|Ga0126375_10225090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1251	Open in IMG/M
3300012971\|Ga0126369_12934907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300015372\|Ga0132256_101127993	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300016270\|Ga0182036_11193931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300016294\|Ga0182041_12344902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300016357\|Ga0182032_10172882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1620	Open in IMG/M
3300016371\|Ga0182034_11507927	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300016445\|Ga0182038_10281694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1351	Open in IMG/M
3300021478\|Ga0210402_11076919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300026328\|Ga0209802_1217391	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300027874\|Ga0209465_10616390	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300027880\|Ga0209481_10710551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300027909\|Ga0209382_12337773	Not Available	501	Open in IMG/M
3300031543\|Ga0318516_10305355	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031544\|Ga0318534_10028603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3025	Open in IMG/M
3300031573\|Ga0310915_10040621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2961	Open in IMG/M
3300031679\|Ga0318561_10054587	Not Available	2009	Open in IMG/M
3300031679\|Ga0318561_10180978	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300031681\|Ga0318572_10530612	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031719\|Ga0306917_11396340	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031724\|Ga0318500_10464281	Not Available	634	Open in IMG/M
3300031748\|Ga0318492_10027250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2542	Open in IMG/M
3300031751\|Ga0318494_10207843	All Organisms → Viruses → Predicted Viral	1116	Open in IMG/M
3300031764\|Ga0318535_10368137	Not Available	642	Open in IMG/M
3300031765\|Ga0318554_10006148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5713	Open in IMG/M
3300031770\|Ga0318521_10096952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1616	Open in IMG/M
3300031771\|Ga0318546_11134259	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031771\|Ga0318546_11308842	Not Available	509	Open in IMG/M
3300031777\|Ga0318543_10008776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3451	Open in IMG/M
3300031794\|Ga0318503_10212355	Not Available	627	Open in IMG/M
3300031795\|Ga0318557_10083622	Not Available	1394	Open in IMG/M
3300031795\|Ga0318557_10110702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1221	Open in IMG/M
3300031795\|Ga0318557_10315077	Not Available	718	Open in IMG/M
3300031796\|Ga0318576_10055589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1726	Open in IMG/M
3300031796\|Ga0318576_10332205	Not Available	718	Open in IMG/M
3300031797\|Ga0318550_10250374	Not Available	859	Open in IMG/M
3300031798\|Ga0318523_10091663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1483	Open in IMG/M
3300031821\|Ga0318567_10478189	Not Available	707	Open in IMG/M
3300031833\|Ga0310917_11176375	Not Available	510	Open in IMG/M
3300031835\|Ga0318517_10008201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3627	Open in IMG/M
3300031879\|Ga0306919_10107342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1975	Open in IMG/M
3300031890\|Ga0306925_11844938	Not Available	577	Open in IMG/M
3300031910\|Ga0306923_10030983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5770	Open in IMG/M
3300031910\|Ga0306923_10659457	Not Available	1169	Open in IMG/M
3300031912\|Ga0306921_11540061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300031946\|Ga0310910_10066149	All Organisms → cellular organisms → Bacteria → Proteobacteria	2595	Open in IMG/M
3300031946\|Ga0310910_11449429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300031959\|Ga0318530_10048077	Not Available	1596	Open in IMG/M
3300031981\|Ga0318531_10199610	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300032039\|Ga0318559_10016143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2782	Open in IMG/M
3300032055\|Ga0318575_10568853	Not Available	575	Open in IMG/M
3300032064\|Ga0318510_10071873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1270	Open in IMG/M
3300032089\|Ga0318525_10171620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1114	Open in IMG/M
3300032091\|Ga0318577_10385540	Not Available	670	Open in IMG/M
3300033290\|Ga0318519_10282748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.48%
Host-Associated	Host-Associated	5.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.92%
Plants	Host-Associated → Plants	5.52%
Aquatic	Environmental → Aquatic	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.52%
Sediment	Environmental → Aquatic → Sediment	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.80%
Loam	Environmental → Terrestrial → Soil → Loam	17.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.55%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_100074832	3300000550	Soil	MKRALTGIASVGILAVTVGVETANAQSYRRYGPART
AP72_2010_repI_A01DRAFT_10219302	3300000579	Forest Soil	MTTFRTNFAAALPVIASVSILAVTVGVETANAQSYRRYGPARTYTPQPYPPQSRGSIPRG
AF_2010_repII_A01DRAFT_10084883	3300000580	Forest Soil	MKRALMGIASVGILAVTVGVETANAQSYRRYGPARTYAPQAYPPQSR
AF_2010_repII_A01DRAFT_10503301	3300000580	Forest Soil	MKRALIGILAAAVAVGTANAQSYRRYGPTRPNTWQGYAPQS
AP72_2010_repI_A10DRAFT_10142283	3300000651	Forest Soil	MKHASIGIVSVGILAVTVGVETANAQSYRRYGPARTYTSQAPIPQSPGVVR
AF_2010_repII_A100DRAFT_10027061	3300000655	Forest Soil	MKRALMGIASVGILAVTVGVETANAQSYRRYGPARTYAPQAYPPQSRGSVPRG
AF_2010_repII_A100DRAFT_10413591	3300000655	Forest Soil	MKRALIGILAAAVAVGTANAQSYRRYAPARPNTWQGYAPQSSG
AF_2010_repII_A100DRAFT_10842881	3300000655	Forest Soil	MMKHASIGMVSVGILAVTVGAETANAQSYRRYGPARTYTSQAYTPQRPGS
AF_2010_repII_A001DRAFT_100553222	3300000793	Forest Soil	MKRALTGIASVGILVAAVGVEAANAQSYRRYGPPRAYTPQAYPSQSRGSVP
AF_2010_repII_A001DRAFT_101357551	3300000793	Forest Soil	MKHASIGMVSVGILAVTVGAETANAQSYRRYGPARTYTSQAYTPQRPGS
AP72_2010_repI_A100DRAFT_10080131	3300000837	Forest Soil	MMKHASIGIVSVSILAVTVGVETANAQSYRRYSPARTYTSQAQIPQNPGSV
AP72_2010_repI_A100DRAFT_10272533	3300000837	Forest Soil	MKRALTGIASVGILVAAVGVEAANAQSYRRYGPPRAY
AP72_2010_repI_A001DRAFT_10086071	3300000893	Forest Soil	MKHASIGIVSVSILAVTVGVETANAQSYRRYSPARTYTSQAQ
JGI11615J12901_113543011	3300000953	Soil	MKRALTGLASVGILAVTVGVETANAQSYRRYGPARTYTSQAYTPQS
JGI1027J12803_1022084522	3300000955	Soil	MKRALTGLASVGILAVTVGVETANAQSYRRYGPARTYTSQA
JGIcombinedJ26739_1002574711	3300002245	Forest Soil	MMKRVLTAIASVGILAVTLGVETANAQSYRRYGLARTY
Ga0066396_100194421	3300004267	Tropical Forest Soil	MKRALIAVASVSILAVTVGVETANAKSYRRYGPARTDTSQAYIPQS
Ga0062595_1026905751	3300004479	Soil	MKRALTGIASVGILAVTVGVETANAQSYRRYGPTRTYAPQGYPSQSRGSV
Ga0066395_108418941	3300004633	Tropical Forest Soil	MKRALIGIASVGILAATVGAETADAQSYRRYGPARAYSSQAY
Ga0066684_104860392	3300005179	Soil	MKRALTGIASVSILAATVGVEMANAQSYRRYGPARTYRPQAYPSPSHGSVPRGNPRSVPFSDPNSPE
Ga0066388_1026652522	3300005332	Tropical Forest Soil	MKRALTGLASVGILVVSVGVEAANAQSYRRYGPPRAYTPQAYPSQSRGSVPRGVPR
Ga0066388_1029491441	3300005332	Tropical Forest Soil	MKRALIAVASVSILAVTVGVETANAKSYRRYGPARTYTSQAYIP
Ga0066388_1081998921	3300005332	Tropical Forest Soil	MNRALTIASVGILAVTVGVETANAQSYRRYDPARTFTPQPYPPRIRGSIPREGVLRTTPFSDPNSPE
Ga0070674_1019654042	3300005356	Miscanthus Rhizosphere	MKRALTGIASVGILAVTVGVETANAQSYRRYGPTRTYAPQGYPS
Ga0070707_1017324351	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKRALIGIASVGILAVTIEVETANAQSYRRYGPARAYTSQAYTPQS
Ga0070696_1009807352	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKRALTGIASVGILAVTVGVETANAQSYRRYGPTRTYAPQGYPSQSRGSVPRGIPRN
Ga0066707_104856092	3300005556	Soil	MKRALTAIASVGILAVTVGVETANAQSYRRYGPARTYNSAAYAPQ
Ga0066905_1014794901	3300005713	Tropical Forest Soil	MKRALTGIASVGILVAAVGVEAANAQSYRRYGPPRAYTPQAYPSQSRGSVPRGVPR
Ga0066905_1015130641	3300005713	Tropical Forest Soil	MERALTGIASVGILALTVGVETANAQPYRRYGPARTYTPQAYPPQSRGSVPRGVPRTVPF
Ga0066905_1019948811	3300005713	Tropical Forest Soil	MMRMRALTGIARVGILAVTVAMEPANAQSYRRYGPARTYTQQPYPPQSRG
Ga0066903_1002227976	3300005764	Tropical Forest Soil	MMKRALIGIASVGILVVTVGVETANAQYYRRYDPAQNFYSQAYTPQSRGSVRREGVLRTTPFSDPN
Ga0066903_1013462252	3300005764	Tropical Forest Soil	MKRALTGIASVSILAVTVGVETANAQSYRRYGATRTYTQPYPPQTDPNSP*
Ga0066903_1015894023	3300005764	Tropical Forest Soil	MMRIRALIGIASVGILAVTVGVRTANAQSYRRYGATRTYTPQPYSPQSRGSIPRRVPRTVPFS
Ga0066903_1018726141	3300005764	Tropical Forest Soil	MMRIRALTGIATVSILAVTVGVETANAQSYRRYGATRTYTPQPYPPQSRGSIPRG
Ga0066903_1050534491	3300005764	Tropical Forest Soil	MMKRALTGIAGVGILAVTVGVETANAQAYRRYGPARTYTSQPYTPQSRGSVRREG
Ga0066903_1068399302	3300005764	Tropical Forest Soil	MTRALTGIASVGILVVTVGVEAANAQSYRRYGPPRAYTPQAYPSQSRGSVPRGVPRNVPFFDPNSP
Ga0066903_1076488672	3300005764	Tropical Forest Soil	MKRALTGIASVSILAVTVGVETANAQSYRRYGPARTYRPE
Ga0066903_1077972712	3300005764	Tropical Forest Soil	MKRALIGFASVGILAVTVGVETANAQYYRRYDPGQNFYSQAYTPQSRGSVRREGVPRTTPFSDPN
Ga0066903_1081797592	3300005764	Tropical Forest Soil	MKRALTGIASVGILAVTVGVEPADAQPYRRYGPARTYSLQAYPPQSRGSVPRNVPRTVPFSDPNS
Ga0066903_1084979622	3300005764	Tropical Forest Soil	MRIRTLSGIASVGILAVTVGVETANAQSYRRYGATRTYTPQPYPPQ
Ga0066903_1088017301	3300005764	Tropical Forest Soil	MKRALTGIAIVGILAGTVGVETANAQSYRRYGAARTYTPQPYPPQSRGSIPRGVP
Ga0066903_1088019502	3300005764	Tropical Forest Soil	MMKRALIGIASVGILAVTVGVETADAQFYRRYGPARIYAPQAYPPQSRG
Ga0075432_103453541	3300006058	Populus Rhizosphere	MKRALTGIASVGILAVTVGVETANAQSYRRYGPARTYRSQAYPSPSQGSVPRGNPRSAPF
Ga0075018_104907721	3300006172	Watersheds	MKRVLTAFASVGILAVTVGVETANAQSYRRYGPARTY
Ga0070712_1011632471	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMKRVLTAIASVGILAVTVGVETANAQSYRRYGPARTYNS
Ga0075425_1008368971	3300006854	Populus Rhizosphere	MKRTLSVIAGLGILSVTLGLETAHAQSYRRYGPARVYAPQAF
Ga0075419_111930242	3300006969	Populus Rhizosphere	MKRALIAILAVTVAVETANAQSYRRYGPARPNASQAYMPQSSGSVRPGGPRA
Ga0075435_1017976562	3300007076	Populus Rhizosphere	MRPALTAIASVGILAVTLWVETANAQPYRRYGPARTYAPQAYPQSPSSVRREGVSRTVPFSDPNSP
Ga0099793_103759531	3300007258	Vadose Zone Soil	MMKRVLTAIASVGILAVTVGVETADAQSSRRYGPARAYNSPAYTPQSRGSVRREGVL
Ga0075418_101787284	3300009100	Populus Rhizosphere	MKRAVSAIASVGILLVTVGVETANAQFSRRYGPAQTY
Ga0066709_1022927062	3300009137	Grasslands Soil	MMKRALTGIASVSILAATVGVEMANAQSYRRYGPARTYRPQAYPSPSHGSLPRANP
Ga0066709_1031393061	3300009137	Grasslands Soil	MMKRALIGIASVGILAVTVGAETANAQPYRRYGPARTYTPQAYPPPSRGSVPRGVQRTVP
Ga0114129_131933542	3300009147	Populus Rhizosphere	MMKRALTGIASVGILVVTVGVEAANAQSYRRYAPART
Ga0126374_107111032	3300009792	Tropical Forest Soil	MKLALIVIASVGILAVTVAMESANAQVTRPYRAPPQ
Ga0126380_100031801	3300010043	Tropical Forest Soil	MRPALTAIAGVGVLAVMLGMETANAQPYRRYGAARTYTSQPYTPQSRGSVRREGVPRTV
Ga0126380_101057631	3300010043	Tropical Forest Soil	MRPALTAVAGVGVLAVMLGMETANAQPYRRYGAARTYTSQPCTPQSRSSVRREGVPRTGLFLPSDRSGLR*
Ga0126380_101895503	3300010043	Tropical Forest Soil	MMKHASIGIVSVGILAVTVGVETANAQSYRRYGPARTYTSQAPIPQSPGSVRREGGLRTTPFSDPNSP
Ga0126380_109395643	3300010043	Tropical Forest Soil	MMKRALTGIASVGILAVTVGVGTANAQPYRRYGPARTYTPQAYPPQSRGSVPRGVPRTVPFSDPNSPE
Ga0126382_102052951	3300010047	Tropical Forest Soil	MRPALTAVAGVGVLAVMLGMETANAQPYRRYGAARTYTSQPYTPQSRGSVRREG
Ga0126382_102576171	3300010047	Tropical Forest Soil	MMKRALIGIASVGILAVTVGVETADAQSYRRYGPARAYSSQAY
Ga0126382_125406522	3300010047	Tropical Forest Soil	MKRALFAIASAGIVATAVGVEAANAQSYRRYGATRTYTPQPYPPQSRGSIPRG
Ga0126373_101238184	3300010048	Tropical Forest Soil	MMKRVLTGIASVGILTVTVGMETANAQSYRRYGPARTYTSPAYTPQIRGSVRREGVL
Ga0134062_104984241	3300010337	Grasslands Soil	MMKRALTGIASVSILAATVGVEMANAQSYRRYGPARTYRPQAYPSPSHGS
Ga0126370_100931611	3300010358	Tropical Forest Soil	MMRIRALTGIASVGILAVTVAMEPANAQSYRRYGPARTYSPQPYPPQSR
Ga0126370_111408782	3300010358	Tropical Forest Soil	MRRALTGIAIVGILAGTVGVETANAQSSRRYGPARTYTSQAYTS
Ga0126376_119671211	3300010359	Tropical Forest Soil	MKRALIAVASVGILAVTVGVETANAQSYRRYGPARTYTSQAYTPQSRGLV
Ga0126376_124350011	3300010359	Tropical Forest Soil	MMKRALTGIASVGILAVTVGVGTANAQPYRRYGPARTYTPQAYPPQSRGSVPRGV
Ga0126372_120861461	3300010360	Tropical Forest Soil	MKRALIAVASVGILAVTVGVETANAQSYRRYGPARTYTSQAYTPQSRGLVRREGV
Ga0126372_121091021	3300010360	Tropical Forest Soil	MMRIRALTGIATVSILAVTVGVETANAQSYRRYGATRTYTPQPYPPQSRGSIPRGS
Ga0126378_104703641	3300010361	Tropical Forest Soil	MMRIRALTGIASVGILALTVGVETANAQSYRRYGAARTYTPQPYPPQSRGSIPRGVPRTVPF
Ga0126378_133142411	3300010361	Tropical Forest Soil	MMRRALTGIASVSILAVTVGVETANARSYRHYGPAR
Ga0126377_125593402	3300010362	Tropical Forest Soil	MKRALIGIASVGILAVTVAVETANAQLYRRYGPARSYAPQAYPPQ
Ga0126379_113762272	3300010366	Tropical Forest Soil	MMKRALTGIAGVGILAVTVGIETANAKAYRRYGPARTYTSQAYTPQSPGSFRREGGLRTTPFS
Ga0126379_119968722	3300010366	Tropical Forest Soil	MMKRALMGIASVGILAVTVGVETANAQSYRRYGPARTYAPQAYPP
Ga0126381_1027004832	3300010376	Tropical Forest Soil	MMKRALIGIASVGILAVTVGAETADAQSYRRYGPARAYSSQAY
Ga0126381_1030384682	3300010376	Tropical Forest Soil	MKRALTAIASVGLLAVTLGVETANAQSYRRYGPAR
Ga0134124_126309011	3300010397	Terrestrial Soil	MVKRALTGIASVGILAVTVGMEAANAQPYRRYGPARTYAPQAYPSQSRGSI
Ga0126383_123627521	3300010398	Tropical Forest Soil	MMKRALIGIASVGILAVTVGVEAADAQPYRRYGPARTYSLQAYPPQSRGSVPRNVPRTVP
Ga0126383_135470632	3300010398	Tropical Forest Soil	MMRIRALTGIASMGILAVTVGVETANAQSYRRYGATR
Ga0124850_10342151	3300010863	Tropical Forest Soil	MMKRALTAIASVGILAVTLGVETANAQSYRRYGPARTYNSPAYTPQIARLYPP
Ga0124850_10410203	3300010863	Tropical Forest Soil	MKRALTCIASVGVLAVTVGMETANAQPYRRYGPARTYAPQPYPRQAYPTQS
Ga0137382_113538871	3300012200	Vadose Zone Soil	MKRALSVIAGVGTLAVTLGVETANAQSYRRYGPVRAYT
Ga0137362_101314273	3300012205	Vadose Zone Soil	MKRVLTAIASVGILAVTVGVETADAQSSRRYGPARAYNSPAYTPPKPRLGSP*
Ga0137362_102552414	3300012205	Vadose Zone Soil	MMKRALTGVACVGILAVTVGVETANAQPYRRYGPARTYSSQ
Ga0137377_101271405	3300012211	Vadose Zone Soil	MMKRALIGIASVGILAVTVGVETANAQPYRRYGPAR
Ga0137377_104034763	3300012211	Vadose Zone Soil	MKRALTAIASVGILAVTVGVETANAQSYRRYGPART
Ga0137387_108005252	3300012349	Vadose Zone Soil	MMKRALIVIASVGILAVTIEVETANAQSYRRYGPARAYTS
Ga0137398_104060491	3300012683	Vadose Zone Soil	MMKRVLTAIASVGILAVTVGVETANAQSYRRYGPARTYNSPAYTPQSRGSVRREGVL
Ga0126375_102250901	3300012948	Tropical Forest Soil	MMKRALTAIASVGILAVTVAVETANAQSYRRYGPARTYTSQAYTPQS
Ga0126369_107978481	3300012971	Tropical Forest Soil	MMKRALTGIASVGILAVTVGVGTANAQPYRRSGPARPYTPQAYPPQSRGSVPRGVP
Ga0126369_127312432	3300012971	Tropical Forest Soil	MKRALTGIASVSILAVTVGVETANAQSYRRYGPARTYRPQAYPSPSHRSVPRGNPRSVPFSDP
Ga0126369_129349071	3300012971	Tropical Forest Soil	MKRALIAVASVSILAVTVGVETANAKSYRRYGPARTYTSQAYIPQSRGS
Ga0126369_130699991	3300012971	Tropical Forest Soil	MMRIRALTGIASVGILAVTVGVETANAQSYRRHGAAQTYTPQPYPPQSRGSIPRGVPRTVPF
Ga0164308_101925322	3300012985	Soil	MVKRALTGIASVGILAVTVGVETANAQSYRRYGPTRTYAPQGYPSQSRGSVPRGIPRNAPFS
Ga0132256_1011279932	3300015372	Arabidopsis Rhizosphere	MVKRALTAIASVGILAVAVGVETAKAQSYRRYGPARTYN
Ga0182036_111939312	3300016270	Soil	MKRALIGIASVGILAVTVGVWTANAQPYRRYGPART
Ga0182041_123449021	3300016294	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTS
Ga0182032_101728821	3300016357	Soil	MKRALIGIASVGILAVTVGVETADAQPYRRYAPARTYSSQPY
Ga0182032_107255221	3300016357	Soil	MKRALTGIASVAILAVTVGVETANAQPYRRYGAARTYTPQPYPPQSRGSIPRGVPRTVPFSDPNSP
Ga0182034_115079272	3300016371	Soil	MMKRALTAIVSVGILAATVVMEPANAQRYRRYGPAR
Ga0182034_120121062	3300016371	Soil	MMRALIGIASVGILAVTVAVETANAQLYRRYGPARSYAPQAYPPQSRGSVSRGA
Ga0182040_106251712	3300016387	Soil	LMMRVRALTGIASVGILAVTVAMDTANAQSYRRYGAARTYTPQPYPPRSRGSIPRGVPRTVPFSDPNSP
Ga0182040_114968341	3300016387	Soil	MMRIRALIGIASVGILAVTVGVRTANAQSYRRYGATRTYTPQPYPPQSRGSIPRGVPRTVPFS
Ga0182040_117229512	3300016387	Soil	MKRALTAIASVGILAVTLRVETANAQSYRRYGTARTYNSPAYTPQSRGSVRREGVLRTTPFA
Ga0182039_100253141	3300016422	Soil	MMRIRALTGIASVGILAVTVGVETANAQSYRRHGGAQTYTPQPYPPQSRGSIPRGVPRTVPFSDPNSP
Ga0182038_102816941	3300016445	Soil	MKRALIGIASVGILAVTVGVETADAQSYRRYGPARAYSSQAY
Ga0210407_108321502	3300020579	Soil	MKCVLTAIASVGILAVTVGVETANAQSYRRYGPARTYNSPAYTPQSRGSVRREGVLR
Ga0210402_110769191	3300021478	Soil	MKRALTGIASVGILAVTVGVETANAQSYRRYGPTRTYAPQGYP
Ga0207693_100596143	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MVKRALTGIASVGILAVTVGVETANAQSYRRYGPTRTYAPQGYPSQSRGSV
Ga0209647_10451104	3300026319	Grasslands Soil	MKRVLTAIASVGILAVTVGVETADAQSSRRYGPARAYNSPAYTPQSRGSVR
Ga0209802_12173911	3300026328	Soil	MMKRVLTAIASVGILAVTVGVETANAQSYRRYGPARTY
Ga0257172_10798812	3300026482	Soil	MKRVLTAIASVGILAVTVGVETADAQSSRRYGPARAYNSPAYTPQSRGSVRRE
Ga0209076_11421752	3300027643	Vadose Zone Soil	MKRVLTAIASVGILAVTVGVETADAQSSRRYGPARAYNSPAYTPQSRGSVRREGVL
Ga0209465_102773813	3300027874	Tropical Forest Soil	MMKRALIGIASVGILAVTVGVETADAQFYRRYGPARIYAPQAYPPQSRGAVPRGVPRTVP
Ga0209465_106163901	3300027874	Tropical Forest Soil	MKRALTGIASVGILAVTVGVGTANAQPYRRYGPARTYT
Ga0209481_107105511	3300027880	Populus Rhizosphere	MKRALIAILAVTVAVETANAQSYRRYGPARPNASQAYTP
Ga0209382_123377732	3300027909	Populus Rhizosphere	MKRALIGIASVGILAVTIEVETANAQSYRRYGPARA
Ga0209526_102186703	3300028047	Forest Soil	MKCVLTAIASVGILAVTVGVETANAQSYRRYGPARTYNSPAYTPQSRGSVRREGVLRTTPFADPNS
Ga0170820_176705432	3300031446	Forest Soil	MKRALTGIASVGILAVTVGVETANAQSYRRYGPARTYNSPAYTPQSRGSVRREGVLRTTPFA
Ga0318516_103053552	3300031543	Soil	LMMRVRALTGIASVGILAVTVAMDTANAQSYRRYGAARTYTPQPYP
Ga0318534_100286036	3300031544	Soil	MKRALIGIASVGILAVTVAVETADAQPYRRYGPART
Ga0318534_107530631	3300031544	Soil	MMRIRALIGIASVGILAVTVGVETANAQSYRRYGATRTYTPQPYPPQSRGSIPR
Ga0310915_100406211	3300031573	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPARTYTSQAYIPQSRG
Ga0310915_107913932	3300031573	Soil	MKRALTAIASVGILAVTVGVETAKAQSYRRYGPARTYNSPAYTPQSRGSVRREG
Ga0318561_100545873	3300031679	Soil	MMRIRALTGIASVGILAVTVGVETANAQSYRRHGAAQTYTPQP
Ga0318561_101809781	3300031679	Soil	MMRVRALTGIASVGILAVTVAMDTANAQSYRRYGAARTY
Ga0318572_105306122	3300031681	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTY
Ga0306917_113963401	3300031719	Soil	MMKRALTAIVSVGILAATVVMEPANAQRYRRYGPARTYVPQAYPPQSR
Ga0318500_104642811	3300031724	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPARTYTSQAYIPQSRGSARREGVSSTG
Ga0318492_100272503	3300031748	Soil	MMKRALTAITGVAILVVTVGVETANAQAYRRYGPARTYTAQAYTPQSRG
Ga0318494_102078431	3300031751	Soil	MMRIRALIGIASVGILAVTVGVETANAQSYRRYGATRTYTPQPYPPQSR
Ga0318535_103681371	3300031764	Soil	MMRIRALIGIASVGILAVTVGVETANAQSYRRYGATRTYT
Ga0318554_100061481	3300031765	Soil	MKRALIGIASVGILAVTVGVWTANAQPYRRYGPARTYAPQAY
Ga0318521_100969521	3300031770	Soil	MMKRALTAITGVAILVVTVGVETANAQAYRRYGPARTYTAQ
Ga0318546_111342592	3300031771	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTLPAYTPQ
Ga0318546_112781792	3300031771	Soil	MKRVLAGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYTPQIR
Ga0318546_113088421	3300031771	Soil	MKRALTGIASVGILAVTVGVETANAQSHRSYSAARTYTPQPY
Ga0318543_100087761	3300031777	Soil	MMRIRALIGIASVGILAVTVGVRTANAQSYRRYGATRTYTPQP
Ga0318547_103145931	3300031781	Soil	MMRIRALIGIASVGILAVTVGVRTANAQSYRRYGATRTYTPQPYSPQSRGSI
Ga0318503_102123551	3300031794	Soil	MKRALIGIASVGILAVTVGVETADAQSYRRYGPARAYSSQAYTPQSRGAVRR
Ga0318557_100836221	3300031795	Soil	MMRIRALIGIASVGILAVTVGVETANAQSYRRYGATRTYTP
Ga0318557_101107023	3300031795	Soil	MKRALIGIASVGILAVTVGAETADAQSYRRYGPARAYSSQAYTPQSRGAVR
Ga0318557_103150771	3300031795	Soil	MMRVRALTGIASVGILAVTVAMDTANAQSYRRYGAARTYTPQPYP
Ga0318576_100555891	3300031796	Soil	MKRALIGIASVGILAVTVGVETADAQPYRRYAPARTYSSQPYQAAEKLGKE
Ga0318576_103322051	3300031796	Soil	MKRALTASVGILAVTVGVETANAQSYRRYGPARTY
Ga0318550_102379661	3300031797	Soil	MKRALTGIASVGILVAAVGVEAANAQSYRRYGPPRAYTPQAYPSQSRGSVPRGVPRS
Ga0318550_102503741	3300031797	Soil	MMRIRALIGIASVGILAVTVGVETANAQSYRRYGATRTYTPQPYPPQS
Ga0318550_105968641	3300031797	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYTPQIRGSI
Ga0318523_100916633	3300031798	Soil	MMRIRALTGIASVGILAVTVGVETANAQSYRRHGAAQTYTPQ
Ga0318568_109311161	3300031819	Soil	MKRTLTAIASAGILAVTLGVETANAQSYRRYGPARTYNSPAYTPQSRGSVRREGVLRT
Ga0318567_103774802	3300031821	Soil	MKRALTAIASVGILAVTLRVETANAQSYRRYGTARTYNSPAYTPRRGSVRR
Ga0318567_104781892	3300031821	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPARTYTSQAYI
Ga0318499_103472792	3300031832	Soil	MKRALTANASVGVLAVTVGVETANAQSYRRYGTARTYNSPAYTPR
Ga0310917_111763751	3300031833	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPARTYASQ
Ga0318517_100082011	3300031835	Soil	MMKRALTSITGVAILVVTVGVETANAQAYRRYGPARTYTAQA
Ga0306919_101073424	3300031879	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYTP
Ga0318544_101820051	3300031880	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYTPQIRGSIRREGVLRTT
Ga0306925_118449381	3300031890	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPAR
Ga0306923_100309839	3300031910	Soil	MMKRALTSITGVAILVVTVGVETANAQAYRRYGPARTYTAQAYTPQS
Ga0306923_106594571	3300031910	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPARTYASQAY
Ga0306921_115400611	3300031912	Soil	MKRALTGIASVGILAVTVGVETANAQSYRRYGPAR
Ga0310910_100661494	3300031946	Soil	MKRALTGIASVGILVAAVGVEAANAQSYRRYGPPRAYT
Ga0310910_101686963	3300031946	Soil	MMKRALTAITGGAILVVTVGVETANAQAYRRYGPARTYTAQAYTPQSRGSVRREGGLRTTPFSDPN
Ga0310910_113634971	3300031946	Soil	MMRVRALTGIASVGILAVTVAMDTANAQSYRRYGAARTYTPQPYPPRSRGSIPRGVPRTVPFSDPNS
Ga0310910_114494292	3300031946	Soil	MKRALIGIASVGILVLTVGAETANAQPYRRYGPARSYAPQAYPP
Ga0318530_100480771	3300031959	Soil	MMRIRALIGIASVGILAVTVGVETANAQSYRRYGATRTYTPQPY
Ga0318530_101429341	3300031959	Soil	MKRALIGIASVGILAVTVGAETADAQSYRRYGPARAYSSQAYTPQSRGAVRRGGVPGNAPGY
Ga0318531_101996101	3300031981	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYT
Ga0318507_102422211	3300032025	Soil	MMKRALTGIAGVGILAVTVGVETANAQAYRRYGPARTYTSQPYTPQSRDSVRREGVPRT
Ga0318559_100161435	3300032039	Soil	MKRALIGIASVGILAVTVGAETADAQSYRRYGPARAYSSQAYTP
Ga0318532_102296892	3300032051	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYTPQIRGSIRREGVLRT
Ga0318575_105688531	3300032055	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPARTYTSQAY
Ga0318533_112284862	3300032059	Soil	MKCVLTAIASVGILAVTVGVETAKAQSYRRYGPARTYNSPAYTPPKPRLGSPRGRS
Ga0318510_100718733	3300032064	Soil	MMKRALTAITGVAILVVTVGVETANAQAYRRYGPARTYTAQPYTPPKP
Ga0318510_100852163	3300032064	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYTPQIRGSIRRE
Ga0318525_100210771	3300032089	Soil	MKRALIGIASVGILAVTVGAETADAQSYRRYGPARAYSSQAYTPQSRGAVRRGG
Ga0318525_101716201	3300032089	Soil	MMRIRALIGIASVGILAVTVGVRTANAQSYRRYGATRTY
Ga0318518_100482764	3300032090	Soil	MKRVLTGIASVGILAVTVGVETANAQSYRRYGPARTYTSPAYTPQIRGSIRREGVLR
Ga0318577_103855401	3300032091	Soil	SIMKRALTASVGILAVTVGVETANAQSYRRYGPARTYTS
Ga0306920_1002008584	3300032261	Soil	MKRALIAVASASILAVTVGVEMANAKSYRRYGPARTYASQAYIPQSRGSVRREGVSSTGPFSDPNS
Ga0318519_102827481	3300033290	Soil	MMKRALTAITGVAILVVTVGVETANAQAYRRYGPARTYTAQPYTPPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F032013

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences