Metagenome / Metatranscriptome Family F032183

Basic Information
Family ID	F032183
Family Type	Metagenome / Metatranscriptome
Number of Sequences	180
Average Sequence Length	46 residues
Representative Sequence	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSALLNRHNRERP
Number of Associated Samples	145
Number of Associated Scaffolds	180

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.78 %
% of genes near scaffold ends (potentially truncated)	28.89 %
% of genes from short scaffolds (< 2000 bps)	72.22 %
Associated GOLD sequencing projects	137
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (55.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (17.222 % of family members)
Environment Ontology (ENVO)	Unclassified (28.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (35.556 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.26% β-sheet: 0.00% Coil/Unstructured: 39.74%
Feature Viewer

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Pfam ID	Name	% Frequency in 180 Family Scaffolds
PF00912	Transgly	10.56
PF00072	Response_reg	8.33
PF13545	HTH_Crp_2	3.89
PF02518	HATPase_c	3.33
PF00210	Ferritin	2.78
PF05532	CsbD	1.67
PF00534	Glycos_transf_1	1.67
PF02954	HTH_8	1.67
PF01594	AI-2E_transport	1.67
PF00990	GGDEF	1.67
PF16864	Dimerisation2	1.67
PF13439	Glyco_transf_4	1.11
PF13185	GAF_2	1.11
PF13727	CoA_binding_3	0.56
PF04120	Iron_permease	0.56
PF02371	Transposase_20	0.56
PF00872	Transposase_mut	0.56
PF03631	Virul_fac_BrkB	0.56
PF02915	Rubrerythrin	0.56
PF10282	Lactonase	0.56
PF00905	Transpeptidase	0.56
PF09537	DUF2383	0.56
PF01391	Collagen	0.56
PF13188	PAS_8	0.56

COG ID	Name	Functional Category	% Frequency in 180 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	10.56
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	10.56
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	10.56
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.67
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.67
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.56
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.56
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.56

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	22.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	22.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	15.00 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.00 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.00 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.00 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_27092	All Organisms → cellular organisms → Bacteria	3717	Open in IMG/M
2228664021\|ICCgaii200_c0675108	Not Available	865	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10824610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300000787\|JGI11643J11755_11645550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1465	Open in IMG/M
3300002407\|C687J29651_10281525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300002681\|Ga0005471J37259_108517	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300004025\|Ga0055433_10098597	Not Available	661	Open in IMG/M
3300004052\|Ga0055490_10064869	Not Available	979	Open in IMG/M
3300004137\|Ga0058883_1470767	Not Available	658	Open in IMG/M
3300004156\|Ga0062589_102327006	Not Available	551	Open in IMG/M
3300004156\|Ga0062589_102553197	Not Available	529	Open in IMG/M
3300004463\|Ga0063356_100378039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1808	Open in IMG/M
3300004463\|Ga0063356_100620538	Not Available	1467	Open in IMG/M
3300004463\|Ga0063356_101160248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300005168\|Ga0066809_10070055	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005175\|Ga0066673_10530268	Not Available	691	Open in IMG/M
3300005183\|Ga0068993_10360879	Not Available	533	Open in IMG/M
3300005294\|Ga0065705_10109623	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4689	Open in IMG/M
3300005294\|Ga0065705_10710605	Not Available	648	Open in IMG/M
3300005295\|Ga0065707_10005777	All Organisms → cellular organisms → Bacteria → Proteobacteria	3427	Open in IMG/M
3300005445\|Ga0070708_100925912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	818	Open in IMG/M
3300005446\|Ga0066686_10696014	Not Available	686	Open in IMG/M
3300005471\|Ga0070698_100718181	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005471\|Ga0070698_102020598	Not Available	530	Open in IMG/M
3300005526\|Ga0073909_10012597	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300005536\|Ga0070697_100128473	All Organisms → cellular organisms → Bacteria → Proteobacteria	2124	Open in IMG/M
3300005543\|Ga0070672_101125992	Not Available	698	Open in IMG/M
3300005836\|Ga0074470_11274722	Not Available	701	Open in IMG/M
3300005844\|Ga0068862_101077613	Not Available	798	Open in IMG/M
3300005886\|Ga0075286_1006229	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300006049\|Ga0075417_10058678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1680	Open in IMG/M
3300006844\|Ga0075428_101921421	Not Available	614	Open in IMG/M
3300006845\|Ga0075421_101925039	Not Available	632	Open in IMG/M
3300006845\|Ga0075421_102130185	Not Available	594	Open in IMG/M
3300006852\|Ga0075433_10300793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1420	Open in IMG/M
3300006853\|Ga0075420_100848070	Not Available	787	Open in IMG/M
3300006854\|Ga0075425_100200172	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300006876\|Ga0079217_10010546	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2959	Open in IMG/M
3300006903\|Ga0075426_10021685	All Organisms → cellular organisms → Bacteria	4592	Open in IMG/M
3300006903\|Ga0075426_10147292	Not Available	1698	Open in IMG/M
3300006914\|Ga0075436_100119094	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300006914\|Ga0075436_100821631	Not Available	693	Open in IMG/M
3300006918\|Ga0079216_10115051	Not Available	1334	Open in IMG/M
3300006954\|Ga0079219_11232123	Not Available	651	Open in IMG/M
3300007076\|Ga0075435_101637729	Not Available	565	Open in IMG/M
3300009081\|Ga0105098_10566648	Not Available	587	Open in IMG/M
3300009147\|Ga0114129_10028753	All Organisms → cellular organisms → Bacteria → Proteobacteria	7876	Open in IMG/M
3300009147\|Ga0114129_10356061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1938	Open in IMG/M
3300009147\|Ga0114129_11431134	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300009162\|Ga0075423_13083615	Not Available	510	Open in IMG/M
3300009167\|Ga0113563_11926837	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300009553\|Ga0105249_10998124	Not Available	906	Open in IMG/M
3300009678\|Ga0105252_10000414	All Organisms → cellular organisms → Bacteria	30082	Open in IMG/M
3300009678\|Ga0105252_10043432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1682	Open in IMG/M
3300009805\|Ga0105079_1045968	Not Available	510	Open in IMG/M
3300009809\|Ga0105089_1089331	Not Available	533	Open in IMG/M
3300009818\|Ga0105072_1053179	Not Available	773	Open in IMG/M
3300010391\|Ga0136847_10046909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	687	Open in IMG/M
3300010400\|Ga0134122_13010272	Not Available	525	Open in IMG/M
3300011120\|Ga0150983_15600657	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300011432\|Ga0137428_1007128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3075	Open in IMG/M
3300011433\|Ga0137443_1054349	Not Available	1096	Open in IMG/M
3300011442\|Ga0137437_1003124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5897	Open in IMG/M
3300012040\|Ga0137461_1000182	All Organisms → cellular organisms → Bacteria	14574	Open in IMG/M
3300012159\|Ga0137344_1021928	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300012174\|Ga0137338_1077788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300012202\|Ga0137363_10047366	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300012205\|Ga0137362_10334168	Not Available	1312	Open in IMG/M
3300012207\|Ga0137381_11445513	Not Available	579	Open in IMG/M
3300012228\|Ga0137459_1247785	Not Available	515	Open in IMG/M
3300012353\|Ga0137367_10344575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1061	Open in IMG/M
3300012361\|Ga0137360_10233583	Not Available	1503	Open in IMG/M
3300012486\|Ga0157331_1016666	Not Available	612	Open in IMG/M
3300012532\|Ga0137373_10731343	Not Available	736	Open in IMG/M
3300012922\|Ga0137394_10292192	Not Available	1393	Open in IMG/M
3300012923\|Ga0137359_10079670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2874	Open in IMG/M
3300012923\|Ga0137359_10689863	Not Available	890	Open in IMG/M
3300012931\|Ga0153915_10354239	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300012938\|Ga0162651_100046737	Not Available	674	Open in IMG/M
3300012958\|Ga0164299_10158495	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300014321\|Ga0075353_1077750	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300014861\|Ga0180061_1041068	Not Available	742	Open in IMG/M
3300014873\|Ga0180066_1005700	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300014883\|Ga0180086_1212502	Not Available	500	Open in IMG/M
3300015259\|Ga0180085_1172657	Not Available	651	Open in IMG/M
3300015371\|Ga0132258_11463520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1725	Open in IMG/M
3300015371\|Ga0132258_11480115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1715	Open in IMG/M
3300015371\|Ga0132258_11920634	Not Available	1490	Open in IMG/M
3300015372\|Ga0132256_100006980	All Organisms → cellular organisms → Bacteria	9719	Open in IMG/M
3300015372\|Ga0132256_100660072	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300015372\|Ga0132256_101940737	Not Available	696	Open in IMG/M
3300017792\|Ga0163161_11521563	Not Available	588	Open in IMG/M
3300017930\|Ga0187825_10006391	All Organisms → cellular organisms → Bacteria	3943	Open in IMG/M
3300017997\|Ga0184610_1014404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2045	Open in IMG/M
3300017997\|Ga0184610_1146196	Not Available	774	Open in IMG/M
3300018028\|Ga0184608_10007279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3654	Open in IMG/M
3300018031\|Ga0184634_10000116	All Organisms → cellular organisms → Bacteria	17224	Open in IMG/M
3300018052\|Ga0184638_1049242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1533	Open in IMG/M
3300018052\|Ga0184638_1057649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1418	Open in IMG/M
3300018053\|Ga0184626_10020852	Not Available	2658	Open in IMG/M
3300018054\|Ga0184621_10036914	Not Available	1587	Open in IMG/M
3300018056\|Ga0184623_10044722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2014	Open in IMG/M
3300018063\|Ga0184637_10075551	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300018071\|Ga0184618_10003174	All Organisms → cellular organisms → Bacteria	4326	Open in IMG/M
3300018072\|Ga0184635_10358144	Not Available	559	Open in IMG/M
3300018073\|Ga0184624_10007042	All Organisms → cellular organisms → Bacteria	3746	Open in IMG/M
3300018073\|Ga0184624_10133671	Not Available	1082	Open in IMG/M
3300018074\|Ga0184640_10093854	All Organisms → cellular organisms → Bacteria → PVC group	1299	Open in IMG/M
3300018074\|Ga0184640_10263060	Not Available	783	Open in IMG/M
3300018074\|Ga0184640_10311485	Not Available	714	Open in IMG/M
3300018076\|Ga0184609_10059675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1646	Open in IMG/M
3300018077\|Ga0184633_10004304	All Organisms → cellular organisms → Bacteria	6479	Open in IMG/M
3300018077\|Ga0184633_10028469	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300018077\|Ga0184633_10269802	Not Available	872	Open in IMG/M
3300018077\|Ga0184633_10613551	Not Available	512	Open in IMG/M
3300018078\|Ga0184612_10001140	All Organisms → cellular organisms → Bacteria	12838	Open in IMG/M
3300018079\|Ga0184627_10041421	All Organisms → cellular organisms → Bacteria	2359	Open in IMG/M
3300018081\|Ga0184625_10008579	All Organisms → cellular organisms → Bacteria	4666	Open in IMG/M
3300018081\|Ga0184625_10089849	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300018082\|Ga0184639_10048470	Not Available	2191	Open in IMG/M
3300018082\|Ga0184639_10499909	Not Available	613	Open in IMG/M
3300018084\|Ga0184629_10026202	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300018084\|Ga0184629_10032636	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2265	Open in IMG/M
3300018084\|Ga0184629_10105440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1384	Open in IMG/M
3300018422\|Ga0190265_10156946	All Organisms → cellular organisms → Bacteria → Proteobacteria	2234	Open in IMG/M
3300018422\|Ga0190265_12488200	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	617	Open in IMG/M
3300019263\|Ga0184647_1120901	Not Available	685	Open in IMG/M
3300019789\|Ga0137408_1366524	Not Available	987	Open in IMG/M
3300019879\|Ga0193723_1037090	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300019881\|Ga0193707_1001449	All Organisms → cellular organisms → Bacteria	8637	Open in IMG/M
3300019886\|Ga0193727_1082333	Not Available	975	Open in IMG/M
3300020003\|Ga0193739_1005884	Not Available	3312	Open in IMG/M
3300020018\|Ga0193721_1016279	Not Available	1956	Open in IMG/M
3300020063\|Ga0180118_1085645	Not Available	718	Open in IMG/M
3300020583\|Ga0210401_10927228	Not Available	730	Open in IMG/M
3300021081\|Ga0210379_10040757	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300021090\|Ga0210377_10074512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2306	Open in IMG/M
3300021344\|Ga0193719_10021284	All Organisms → cellular organisms → Bacteria	2773	Open in IMG/M
3300022756\|Ga0222622_10502121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	867	Open in IMG/M
3300022756\|Ga0222622_11342154	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300024241\|Ga0233392_1006730	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1024	Open in IMG/M
3300025324\|Ga0209640_10019282	All Organisms → cellular organisms → Bacteria	5953	Open in IMG/M
3300025905\|Ga0207685_10740738	Not Available	538	Open in IMG/M
3300025910\|Ga0207684_11544583	Not Available	539	Open in IMG/M
3300025917\|Ga0207660_11112736	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300025939\|Ga0207665_10081831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2224	Open in IMG/M
3300025949\|Ga0207667_11164045	Not Available	752	Open in IMG/M
3300026014\|Ga0208776_1018202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300026535\|Ga0256867_10011811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3817	Open in IMG/M
3300027027\|Ga0209844_1021757	Not Available	511	Open in IMG/M
3300027364\|Ga0209967_1002856	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300027552\|Ga0209982_1031588	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300027573\|Ga0208454_1000332	All Organisms → cellular organisms → Bacteria	30073	Open in IMG/M
3300027637\|Ga0209818_1037427	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300027682\|Ga0209971_1007651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2565	Open in IMG/M
3300027722\|Ga0209819_10003643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4886	Open in IMG/M
3300027873\|Ga0209814_10065845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1519	Open in IMG/M
3300028047\|Ga0209526_10084648	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300028145\|Ga0247663_1004663	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300028380\|Ga0268265_11764546	Not Available	625	Open in IMG/M
3300028381\|Ga0268264_12072206	Not Available	578	Open in IMG/M
3300028814\|Ga0307302_10443087	Not Available	643	Open in IMG/M
3300030006\|Ga0299907_10086395	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300030006\|Ga0299907_10498123	Not Available	964	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10020127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1716	Open in IMG/M
3300031720\|Ga0307469_10790644	Not Available	869	Open in IMG/M
3300031720\|Ga0307469_11635966	Not Available	619	Open in IMG/M
3300031720\|Ga0307469_12407691	Not Available	514	Open in IMG/M
3300031740\|Ga0307468_100662319	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300031965\|Ga0326597_10008087	All Organisms → cellular organisms → Bacteria	14234	Open in IMG/M
3300031965\|Ga0326597_10019158	All Organisms → cellular organisms → Bacteria → Proteobacteria	8871	Open in IMG/M
3300032770\|Ga0335085_11092549	All Organisms → cellular organisms → Bacteria → Proteobacteria	855	Open in IMG/M
3300033417\|Ga0214471_10296837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1315	Open in IMG/M
3300033480\|Ga0316620_10162162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1812	Open in IMG/M
3300033513\|Ga0316628_101036757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1089	Open in IMG/M
3300033513\|Ga0316628_101950226	Not Available	780	Open in IMG/M
3300034115\|Ga0364945_0002244	All Organisms → cellular organisms → Bacteria	5319	Open in IMG/M
3300034150\|Ga0364933_182842	Not Available	548	Open in IMG/M
3300034178\|Ga0364934_0063112	Not Available	1376	Open in IMG/M
3300034643\|Ga0370545_034861	Not Available	922	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	46.11%
Aquatic	Environmental → Aquatic	33.89%
Plants	Host-Associated → Plants	20.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.33%
Sediment	Environmental → Aquatic → Sediment	26.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.78%
Freshwater	Environmental → Aquatic → Freshwater	5.56%
Marine	Environmental → Aquatic → Marine	1.67%
Floodplain	Environmental → Terrestrial → Floodplain	1.67%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.56%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	26.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.33%
Sand	Environmental → Terrestrial → Soil → Sand	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Lake	Environmental → Aquatic → Freshwater → Lake	0.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	26.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.33%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.22%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.11%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.11%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.56%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	17.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.44%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.22%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.22%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.11%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.11%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.56%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.56%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.56%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.56%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.56%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.56%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024241	Subsurface microbial communities from Mancos shale, Colorado, United States - Mancos A_50_July_PB	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027027	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00052600	2199352025	Soil	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKSALLNKRIRERP
ICCgaii200_06751082	2228664021	Soil	MLATLLIVVMILLQTGALSLGIMVGRRIITAKASVSRRWFY
ICChiseqgaiiFebDRAFT_108246102	3300000363	Soil	MLATILIVVMILLQTGAFSLGLMFDLRFITAKARLIRKSAH*
JGI11643J11755_116455502	3300000787	Soil	MLATLLIVVMILLQTGALSLGIMVGRRIITAKASVSRRWFY*
C687J29651_102815251	3300002407	Soil	IAVMILLQTGALSLGLMVGRRFITAAASLNRKSALLNKHNRERP*
Ga0005471J37259_1085171	3300002681	Forest Soil	RRDMLATILIVVMILLQTGALSLGLMVDRRFITAATSLNRKSAHSTIHNRERP*
Ga0055433_100985972	3300004025	Natural And Restored Wetlands	MLATILIVIMILLQTGALSLGLMVGRRVITAAVGSNRKSAQNNR*
Ga0055490_100648692	3300004052	Natural And Restored Wetlands	VFATILIVVMIFLQTGALSLGVALARRFLTAAAGSKGKSTLLNGVNN
Ga0058883_14707671	3300004137	Forest Soil	ILLQTGALSLGLVVGPSFITEAARLNRKSALLNKHNRERP*
Ga0062589_1023270061	3300004156	Soil	IYMLASILIVFMILLQTGALSFGLMMDRRFITPAAGSKRKSSHSNNP*
Ga0062589_1025531972	3300004156	Soil	MLATILIVAMILLQTGALSLSFMIDRRFITAAVSSKRKSSAHSTIHKRER
Ga0063356_1003780391	3300004463	Arabidopsis Thaliana Rhizosphere	MLATLLIVVMILLQTGALSLGLMVDRRFISAAVSLNRKLTH*
Ga0063356_1006205383	3300004463	Arabidopsis Thaliana Rhizosphere	MLASILIVFMILLQTGALSFGLMMDRRFITPAAGSKRKSSHSNNP*
Ga0063356_1011602482	3300004463	Arabidopsis Thaliana Rhizosphere	MLATFLIVVMILLQTGALSLGLMVDRRSIAAAVSLNRKLAAQKK*
Ga0066809_100700552	3300005168	Soil	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSAHSTIHNRERP*
Ga0066673_105302681	3300005175	Soil	MLATILVVVMILLQTGALSLGLMVDRRFITAAVRLNRKSAH*
Ga0068993_103608792	3300005183	Natural And Restored Wetlands	MLATILIVIMILLQAGVLSLGLMVGRRVITAAAGSNRKSAHKQ*
Ga0065705_101096234	3300005294	Switchgrass Rhizosphere	MLATLLIVVMILLQTGALSLGLMVDLRLIVAAVSLNRKLAA*
Ga0065705_107106051	3300005294	Switchgrass Rhizosphere	MLATLLIVVMILLQTGALSLGLMVDRRLIVAAMSLNRKLAR*
Ga0065707_100057773	3300005295	Switchgrass Rhizosphere	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSAHSTIHNRERH*
Ga0070708_1009259121	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLATILIVVMILLQTGALSLGLLVGRRFIAAAVSLNRKSAHSTIHNRE
Ga0066686_106960142	3300005446	Soil	MPATILIVVMILLQTGVLSLGLMVGRRFITEAASVKRKSSLLKKHNRERP*
Ga0070698_1007181812	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLATILIVVMILLQTGALSLGLMVGRRFITAAASLNRKSAH*
Ga0070698_1020205982	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRATILIVVMILLQTGVLSLGLMVGRRFITEAASVKRKSSLLKKHNRERP*
Ga0073909_100125973	3300005526	Surface Soil	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKSALLNKRIRERP*
Ga0070697_1001284732	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLATILIVVMILLQTGVFSLGLMVGRRFITEAARLNRKSALLNKHNRERS*
Ga0070672_1011259921	3300005543	Miscanthus Rhizosphere	MLATILIIVMILLQTGAFSLGLMAIPRFAAAASLKRKLALLNKRIRERP*
Ga0074470_112747221	3300005836	Sediment (Intertidal)	MRAATLIVVMIFLQTGLLSLGLLLGRRFITVAASFKYKWLI*
Ga0068862_1010776132	3300005844	Switchgrass Rhizosphere	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKLALLNKRIRERP*
Ga0075286_10062293	3300005886	Rice Paddy Soil	MLATILIVFMILLQTGALSLGLMVDRRFITAKARLIRKSAH*
Ga0075417_100586783	3300006049	Populus Rhizosphere	MRATILIVVMILLQTGVLSLGLMVGRTFITEAESVKRKSALLNKHNRERP*
Ga0075428_1019214212	3300006844	Populus Rhizosphere	MLATILIIVMILLQTGAFSLGLMAIPRFAAAASLKRKSALLNKRIRERP*
Ga0075421_1019250391	3300006845	Populus Rhizosphere	MLAAILIVVMILLQTGVLSLGLMIDRRFITAKTSLARKAALLQKHDRERP*
Ga0075421_1021301851	3300006845	Populus Rhizosphere	ATIFVVMILLQTGALLLSFMIDRRLITAVVRLKCKSAYSTKRKWERP*
Ga0075433_103007931	3300006852	Populus Rhizosphere	MLATILIVVMILLQTGVFSLGLMLGRQFITEAVRLNRKSALLNKHNWERP*
Ga0075420_1008480701	3300006853	Populus Rhizosphere	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSAHS
Ga0075425_1002001721	3300006854	Populus Rhizosphere	MLATILIVFMILLQTGALSLGLMMDRRFITPAAGSKRKSSHSTIT*
Ga0079217_100105464	3300006876	Agricultural Soil	LIVVMILLQTGALSLGLMVDRRFIIAKASLTGKSL*
Ga0075426_100216856	3300006903	Populus Rhizosphere	MLATILIIVMILLQTGALALGLKVDRRFITAAVSLTRQSA
Ga0075426_101472921	3300006903	Populus Rhizosphere	GVLSLGLMVGCRFIAEAASFNRKSALLNKHNRERP*
Ga0075436_1001190942	3300006914	Populus Rhizosphere	MLATILIIVMILLQTGALALGLKVDRRFITAAVSLTRQSAH*
Ga0075436_1008216312	3300006914	Populus Rhizosphere	MLAFILIVAMILLQTGVLSLGLMVGRRFIAEAASFNRKSALLNKHNRERP*
Ga0079216_101150512	3300006918	Agricultural Soil	MLATILIVVMILLQTGALSLGLMVDRRFIIAKASLTRKSL*
Ga0079219_112321232	3300006954	Agricultural Soil	MLASILIVFMILLQTGALSFGLMIDRRFITPAAGSKRKSSHSN
Ga0075435_1016377292	3300007076	Populus Rhizosphere	MLATILIVVMILLQTGVFSLGLMLGRQFITEAVRLNRKSALLNKHNRERP*
Ga0105098_105666481	3300009081	Freshwater Sediment	MLATILIVVMILLQTGALSLGLMVGRRFVTAAASFNRKSALNNT*
Ga0114129_100287536	3300009147	Populus Rhizosphere	MRATILIVVMILLQTGALSLGLMVGRRFITEAASLKRKSALLNKHNQERP*
Ga0114129_103560612	3300009147	Populus Rhizosphere	MRATILIVVMISLQTGALSLGLIVGRRFITEAASLNRKPAPRNKQRP*
Ga0114129_114311341	3300009147	Populus Rhizosphere	ATILIVVMILLQTGALSLGLMVGPRFITEAASLNRKSALPNKHNRQRP*
Ga0075423_130836151	3300009162	Populus Rhizosphere	MLATILIVFMILLQTGALSLGLMMDRRFITPAAGSK
Ga0113563_119268371	3300009167	Freshwater Wetlands	MLATILIVVMILLQTGVLSLGLMVGHRFITEAAGSNRKSAHSTTHNRERH*
Ga0105249_109981241	3300009553	Switchgrass Rhizosphere	MLATILIVAMILLQTGALSLSFMIDRRFITAAVSSKRKSARSTIHKREWR*
Ga0105252_100004145	3300009678	Soil	MLATILIFVMILLQTGALSLGLMIGHGFITAAVGSNRKFTLLNSVYNRERR*
Ga0105252_100434323	3300009678	Soil	MLATILIVVMILLQTGAMQLGLMVGRRFFTAAASSNGRSILLNSVYNRERC*
Ga0105079_10459681	3300009805	Groundwater Sand	MLATILFAVMILLQTGALSLGLTVGRRFITAAAGSNGKYSRPNSVYHRERH*
Ga0105089_10893312	3300009809	Groundwater Sand	MLATILIAAMILLQTGALSLGLMVGRRFITAAASLNLKSALLNKHNRE
Ga0105072_10531791	3300009818	Groundwater Sand	MRATILIVVMILLQTGVLSLGLMVGRRFITEAASLNRKSALLN
Ga0136847_100469091	3300010391	Freshwater Sediment	MLATILIFVMILLQTGALSLGLMVGRRFITAAAGSNRKSTLLNIVYNRERR*
Ga0134122_130102722	3300010400	Terrestrial Soil	MLATFLIVVMILLQTGALSLALMVDRRFMTAAVNRKLAAQ
Ga0150983_156006571	3300011120	Forest Soil	QRRDMLATILIVVMILLQTGALSLGLMVDRRFITAATSLNRKSAHSTIHNRERP*
Ga0137428_10071282	3300011432	Soil	MRATLLIVVMILLQTGVLSLGLMVGRRFYSRAASVNRKSALFNKHNPQRR*
Ga0137443_10543491	3300011433	Soil	MLATILIVVMILLQTGALSLSLMVDRRFIIAAVSSKRKSVHSTIDNRERP*
Ga0137437_10031245	3300011442	Soil	MLATILIFVMILLQTGALSLGLIIGRTIINAVAGSNRKSILLNSVYNRERP*
Ga0137461_10001823	3300012040	Soil	MLSTILIVVMILLQTGALSLGLRVRRKFIPAAASLNRKSALLNKRNRDRP*
Ga0137344_10219282	3300012159	Soil	MLATILIVVMILLQTGALSFGLMVDRRFIAAAASLNRKSAHSTIHNRERP*
Ga0137338_10777881	3300012174	Soil	MLATILIAVMILLQTGALSLGLMVGGRFIIAAASLNRK
Ga0137363_100473664	3300012202	Vadose Zone Soil	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSAQRP*
Ga0137362_103341684	3300012205	Vadose Zone Soil	LATILIVVMILLQTGALSLGLMVDRRFITARRRA*
Ga0137381_114455131	3300012207	Vadose Zone Soil	ATILIVVMILLQTGVLSLGLMVGRRFITEAASVKRKSSLLKKHNRERP*
Ga0137459_12477852	3300012228	Soil	MLATILIVVMILLQTGALSLSLMVDRRFIIAAVSSKRKSVHSTIDNRE
Ga0137367_103445752	3300012353	Vadose Zone Soil	MRATILIVVMILLQTGALSLGFMVGRRFITEAASVKRKSALFNKHNRE
Ga0137360_102335833	3300012361	Vadose Zone Soil	MLATILIVVMILLQTGALSLGLMVDRRFITAATSLNRKSAHSTIHNRERP*
Ga0157331_10166661	3300012486	Soil	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKSALLNK
Ga0137373_107313432	3300012532	Vadose Zone Soil	MRATILIVVMILLQTGALSLGFMVGRRFINEAASVKRKSALFNKHNRERP*
Ga0137394_102921924	3300012922	Vadose Zone Soil	LVVVMILLQTGALSLGLMVDRRFITAAARLNRKSAH*
Ga0137359_100796701	3300012923	Vadose Zone Soil	MLATILIVAMILLQTGALSLGLMVDRRFITAAARLNRKSAH*
Ga0137359_106898631	3300012923	Vadose Zone Soil	MILLQTGALSLGLMVDRRFITAAASLNRKSAQRP*
Ga0153915_103542393	3300012931	Freshwater Wetlands	MLAIILIVLTILLQTGAWSLGLMADRRLITAAVSLIHKSALLNKHNQERP*
Ga0162651_1000467372	3300012938	Soil	MLATILIIVMILLQTGALSLGLMVDRRFITAAASLNRKSALLNRHNRERP*
Ga0164299_101584951	3300012958	Soil	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKSALLNKRIRER
Ga0075353_10777501	3300014321	Natural And Restored Wetlands	MLATILIVVMISLQSGALSLGLMVDRRLITAAASLNRKSALLNKHNRARP*
Ga0180061_10410682	3300014861	Soil	MRATLLIVVMILLQTGVLSLGLMVGRRFYSRAASVNRKSALFN
Ga0180066_10057003	3300014873	Soil	MLATILIAVMILLQTGALSLGLMVGRRFITAAASLNRKSAL
Ga0180086_12125021	3300014883	Soil	MLATILVVVMILLQTGALSLGLMVDRRFITSAFSFNRKSTRWREV*
Ga0180085_11726571	3300015259	Soil	MLATILIAVMILLQTGALSLGRMVRRRFITAAASLNRKSALLNKHIR
Ga0132258_114635203	3300015371	Arabidopsis Rhizosphere	MLATILIIVMILLQTGALSLGLMAGPRFAAAASLKRKSTLLNKAMRERP*
Ga0132258_114801154	3300015371	Arabidopsis Rhizosphere	MLATILIAVMIPLQTGVLSLGLMVGRRFITEAARSNRKPAHSTIRNRERP
Ga0132258_119206343	3300015371	Arabidopsis Rhizosphere	MLATILIVVMILLQTGALSLSFMIDRRFITAAVSAKRKSARSTIHKREWR*
Ga0132256_10000698014	3300015372	Arabidopsis Rhizosphere	MLATTLIVVMILLQTGALSLGLMVDRRFITAAASLNRKSAHS
Ga0132256_1006600721	3300015372	Arabidopsis Rhizosphere	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKSA
Ga0132256_1019407371	3300015372	Arabidopsis Rhizosphere	SYMLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKSALLNKRIRERP*
Ga0163161_115215633	3300017792	Switchgrass Rhizosphere	MLATILIIVMILLQTGAFSLGLMAIPRFAAAASLKRKLALLNKRIRERP
Ga0187825_100063913	3300017930	Freshwater Sediment	MLAIILIVLTILLQTGAWSLGLMADRRLITAAVSLIHKSALLNKHNQERP
Ga0184610_10144041	3300017997	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSAHSTIHNRERP
Ga0184610_11461963	3300017997	Groundwater Sediment	VLATILIVVMILLQAGALSLGLMIGRRFITAAVSSNRKSAR
Ga0184608_100072793	3300018028	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSALLNRHNRERP
Ga0184634_100001161	3300018031	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVGRRFITAAASLNRKSAH
Ga0184638_10492422	3300018052	Groundwater Sediment	MLATILIVVMILLQTGALSFGLMVDRRFIAAAASLNRKSAHSTIHNRERP
Ga0184638_10576493	3300018052	Groundwater Sediment	MLAIILIVVMILLQTGALSLGLMVGRRIITAAASLNRKSAH
Ga0184626_100208523	3300018053	Groundwater Sediment	MSLQESDMRATILIIVMILLQAGALSLGLMIGRRFITAAVSSNRKSAH
Ga0184621_100369142	3300018054	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRLITAAASLNRKSAHST
Ga0184623_100447222	3300018056	Groundwater Sediment	MSLQGSDMLATILIVVMILLQAGALSLGLMIGRRFITAAVSSNRKSAH
Ga0184637_100755513	3300018063	Groundwater Sediment	MLATILILAMILLHTGALSLGLMVGPRFITGAARWNRKSALLNKHNRERP
Ga0184618_100031746	3300018071	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITGAASLKRKSAVLNRHNRERP
Ga0184635_103581441	3300018072	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSTHSTIHNRERP
Ga0184624_100070425	3300018073	Groundwater Sediment	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKSALLNKRIRERS
Ga0184624_101336713	3300018073	Groundwater Sediment	MLATVLIVVMILLQTGALSLGLMVDRRFITAAASLNRKSVHSTIHNRERP
Ga0184640_100938541	3300018074	Groundwater Sediment	MLATILIVVMILQQTGALSLGLMVSLRFITAAAGSNRNSTLLNRVYNRERR
Ga0184640_102630602	3300018074	Groundwater Sediment	MLATILIIVMMLLQTGALSLGLMAIPRFAAAASLKRKSPLLNKRIRERP
Ga0184640_103114851	3300018074	Groundwater Sediment	LQTGALSLGLMVGRRFITVAAGSNRKSTVLNSVCNRERR
Ga0184609_100596753	3300018076	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLKRKSALLNRHNRERP
Ga0184633_100043043	3300018077	Groundwater Sediment	MLATILIAVMILLQTGALSLGLMVGRRFISAAASLNRKSALLNKHNRERP
Ga0184633_100284691	3300018077	Groundwater Sediment	MLATILIVVMILLQTRALSLGLMVGRRFITAAASLNRKSAH
Ga0184633_102698023	3300018077	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVGLRFIPSAAGSNRKLVLLN
Ga0184633_106135511	3300018077	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVGRRFITAAATLNRKSAH
Ga0184612_100011406	3300018078	Groundwater Sediment	MRATILIIVMILLQAGALSLGLMIGRRFITAAVSSNRKSAH
Ga0184627_100414213	3300018079	Groundwater Sediment	MLATILIFVMILLQTGALSLSLTVGRRFIAAAAGTNRKSTLLNSVYNREQR
Ga0184625_100085793	3300018081	Groundwater Sediment	MLATILIIVMILLQTGAFSLGLMAIPRFAAAASLKRKSALLNKRIRERP
Ga0184625_100898493	3300018081	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSAHSTIHNRERS
Ga0184639_100484703	3300018082	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVGLRFIPSAAGSNRKLVLLNKHNRELR
Ga0184639_104999091	3300018082	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVGRRFITAAATLNRKSA
Ga0184629_100262023	3300018084	Groundwater Sediment	MLATILIVVMILLQTGAMQLGLMVGRRFFTAAASSNGRSILLNSVYNRERC
Ga0184629_100326362	3300018084	Groundwater Sediment	MLATILIAVMILLQTGALALGLMVGRRFITAAASLNRKSALLNKANRERP
Ga0184629_101054402	3300018084	Groundwater Sediment	MLATILIVVMILLQTGALSLGLTIGRRFIAAAASLNRKSALLNKHNRGRP
Ga0190265_101569463	3300018422	Soil	MLATILIVVMILLQTGALSLVLMVDRRLITSAVSFNRKSTH
Ga0190265_124882001	3300018422	Soil	MLVTILIVVMILLQTGALSLGLMVDRRFITAALSLNRKSAH
Ga0184647_11209012	3300019263	Groundwater Sediment	MLATILIVAMILLQTGALSLSFMIDRRFITAAVSSKRKSARSTIHKREWR
Ga0137408_13665242	3300019789	Vadose Zone Soil	MRATILIVVMILLQTGVLSLGLMVGRRFITEAASVKRKSSLLKKHNRERP
Ga0193723_10370903	3300019879	Soil	MLATILIIVMILLQTGALSLGLMAAPLFAAAASLKRKSALLNKPMRERP
Ga0193707_10014493	3300019881	Soil	MLATILIVAMILLQTGALSLGLMVDRRFITGAVSLNRKSAH
Ga0193727_10823332	3300019886	Soil	MLATILIIVMILLKTGALSLGLMAIPRFAAAASLKRKSALLNKRIRERP
Ga0193739_10058842	3300020003	Soil	MLATILIVVMILLQTGVLSLGLMVGRRFITAAASLNRKSAH
Ga0193721_10162791	3300020018	Soil	TILIVVMILLQTGALSLGLMVDRRFITGAVSLNRKSAH
Ga0180118_10856453	3300020063	Groundwater Sediment	ILLQTGALSLGLMVGRRFITAAASLNRKSALLNKHNRERP
Ga0210401_109272282	3300020583	Soil	MLATILIVVMILLQTGALSLGLVVGRRFITEAARLNRKSALLNKHNRERP
Ga0210379_100407572	3300021081	Groundwater Sediment	MLATILIFVMILLQTGALSLGLMVGRTFINAVAGSNRKSILLNSVYNRERP
Ga0210377_100745123	3300021090	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRLITAAVSLNRKSAH
Ga0193719_100212843	3300021344	Soil	LATILVVVMILLQTGALSLGLMVDRRFITAAASLNRKSAH
Ga0222622_105021211	3300022756	Groundwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSTHSTIHN
Ga0222622_113421542	3300022756	Groundwater Sediment	YACTTVLIVVMILLQTGALSLGLMVDRRFITAAASLNRKSTHSTIHNRERP
Ga0233392_10067301	3300024241	Deep Subsurface Sediment	QTGALSLGLMVGRRFITEAVSLNRKSALLNRLNRERP
Ga0209640_100192826	3300025324	Soil	MLATILIVVMILQQTGALSLGLMVGRRFITAVAGSNGKSTLLNSVYNRERRQRRRAR
Ga0207685_107407382	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKS
Ga0207684_115445831	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLATILIVVMILLQTGALSLGLAVGPRFITEAARLNRKSALLNKHNRERP
Ga0207660_111127362	3300025917	Corn Rhizosphere	MLASILIVFMILLQTGALSFGLMMDRRFITPAAGSKRKSSHSNNP
Ga0207665_100818311	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLATILIVVMILLQTGVFSLGLMVGRRFITEAARLNRKSALLNKHNRERS
Ga0207667_111640451	3300025949	Corn Rhizosphere	MLASILIVFMILLQTGALSFGLMMDRRFITPAAGSKRKSSH
Ga0208776_10182022	3300026014	Rice Paddy Soil	MLATILIVFMILLQTGALSLGLMVDRRFITTKARLIRKSAH
Ga0256867_100118116	3300026535	Soil	MLAIILIVAMILLQTGALSLGLMVGRRFITAVVSLNRKSPR
Ga0209844_10217571	3300027027	Groundwater Sand	MLATILFAVMILLQTGALSLGLTVGRRFITAAAGSNGKYSRPNSVYHRERH
Ga0209967_10028562	3300027364	Arabidopsis Thaliana Rhizosphere	MLATILIVVMILLQTGAFSLGLMFDLRFITAKARLIRKSAH
Ga0209982_10315882	3300027552	Arabidopsis Thaliana Rhizosphere	LIVAMILLQTGALSLGLMVDRRFFTAKARLNRKSAH
Ga0208454_10003325	3300027573	Soil	MLATILIFVMILLQTGALSLGLMIGHGFITAAVGSNRKFTLLNSVYNRERR
Ga0209818_10374272	3300027637	Agricultural Soil	LIVVMILLQTGALSLGLMVDRRFIIAKASLTGKSL
Ga0209971_10076511	3300027682	Arabidopsis Thaliana Rhizosphere	MLATILIVAMILLQTGALSLGLMVDRRFFTAKARLNRKSAH
Ga0209819_100036436	3300027722	Freshwater Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSALNNT
Ga0209814_100658453	3300027873	Populus Rhizosphere	MRATILIVVMILLQTGVLSLGLMVGRTFITEAESVKRKSALLNKHNRERP
Ga0209526_100846483	3300028047	Forest Soil	MLATILIVVMILLQTGALSLGLVVGPRFITEAARLNR
Ga0247663_10046632	3300028145	Soil	MLVTIMIVAMILLQTGALSLGFLVDRRFFAAAAGTKRKSALSTIGNREQA
Ga0268265_117645461	3300028380	Switchgrass Rhizosphere	MLATILIIVMILLQTGALSLGLMAIPRFAAAASLKRKLALLNKRIRERP
Ga0268264_120722062	3300028381	Switchgrass Rhizosphere	MLATILIIVMILLQTGAFSLGLMAIPRFAAAASLKRKLALLNK
Ga0307302_104430871	3300028814	Soil	IVVMILLQTGALSLGLMVDRRFITAAASLNRKSAHSTIHNRERP
Ga0299907_100863953	3300030006	Soil	MLATILIVGMILLHTGALSLGLMAGRRLITAAASLSPKQRDNSCL
Ga0299907_104981231	3300030006	Soil	MLAIILIVAMILLQTGALSLGLMIGRRFITAVVSLNRKSPR
(restricted) Ga0255310_100201273	3300031197	Sandy Soil	MLATLLIVVMILLQTGALSLGLMVDRRFIDAATSLIRKLTH
Ga0307469_107906442	3300031720	Hardwood Forest Soil	MLATILIVVMILLQTGVFSLGLAVGPRFITEAARLNRKSALLNKHNRERP
Ga0307469_116359661	3300031720	Hardwood Forest Soil	MLATILIVVMILLQTGVFSLGLMLGRRFITEAVRLNRKSALFNKHSRERP
Ga0307469_124076911	3300031720	Hardwood Forest Soil	VVMILLQTGVLSLGLMVGRRFITEAASVKRKSALLKKHNRERP
Ga0307468_1006623192	3300031740	Hardwood Forest Soil	MLATILIVVMILLQTGALSLGLMLGRRFITEAVRLNRKSALFNKHSRERP
Ga0326597_100080871	3300031965	Soil	MLATILITVMILPQTGALSLGLMVGRRFITAAATLNRKSALLNKHIRERP
Ga0326597_100191581	3300031965	Soil	MLATILIAVMILLQTGALSLGLMVGRRFITSAASLNRKSALLNKHNRERL
Ga0335085_110925491	3300032770	Soil	MLATILIVVMILLQTGALSLGLMVGRRFITEAASLKRESALLNKHNPERP
Ga0214471_102968373	3300033417	Soil	MRTTILIAVMILLQTGALSLGLMTGHRLFTAALGWNRKSVH
Ga0316620_101621621	3300033480	Soil	MLAIILIVLTILLQTGAWSLGLMADRRLITAAVSLKHKSALLKKHNQERP
Ga0316628_1010367573	3300033513	Soil	QTGAWSLGLMADRRLITAAVSLIHKSALLNKHNQERP
Ga0316628_1019502261	3300033513	Soil	MLAIILIVLTILLQTGAWSLGLMADRRLITAAVSLNHKSALLNKHNQERP
Ga0364945_0002244_801_953	3300034115	Sediment	MLATILIVVMILLQTGALSLGLMVDRRFITAAASLNRKSVHSTIHNRERP
Ga0364933_182842_160_309	3300034150	Sediment	MLATILIIVMILLQTGALSLGLMAITRFAAAASLKRKSALLNKRIRERP
Ga0364934_0063112_593_757	3300034178	Sediment	VLATILIVVMILLQTSALSLGLMVGGKFITAAASSNRKSTLLNSVNNQERAKGG
Ga0370545_034861_13_165	3300034643	Soil	MLATSLIVVMILLQTGALSLGLMVDRRFITAAASLNRKSVHSTIHNRERP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters