NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F032421

Metagenome / Metatranscriptome Family F032421

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F032421
Family Type Metagenome / Metatranscriptome
Number of Sequences 180
Average Sequence Length 67 residues
Representative Sequence MNKRPGHVTVTTEVGVCSFCGRPRNLRREDHQLGTLVRTIVTCETCHRTLSSSMGVASAESET
Number of Associated Samples 143
Number of Associated Scaffolds 180

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 45.71 %
% of genes near scaffold ends (potentially truncated) 97.22 %
% of genes from short scaffolds (< 2000 bps) 87.78 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (61.111 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(19.444 % of family members)
Environment Ontology (ENVO) Unclassified
(35.556 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.889 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 39.56%    Coil/Unstructured: 60.44%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 180 Family Scaffolds
PF02729OTCace_N 86.67
PF00156Pribosyltran 4.44
PF00988CPSase_sm_chain 3.89
PF01063Aminotran_4 0.56
PF02787CPSase_L_D3 0.56
PF02786CPSase_L_D2 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 180 Family Scaffolds
COG0505Carbamoylphosphate synthase small subunitAmino acid transport and metabolism [E] 7.78
COG0115Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyaseAmino acid transport and metabolism [E] 1.11

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.11 %
UnclassifiedrootN/A38.89 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918006|ConsensusfromContig85970All Organisms → cellular organisms → Bacteria2133Open in IMG/M
3300001086|JGI12709J13192_1020015All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300001154|JGI12636J13339_1005382Not Available2091Open in IMG/M
3300001412|JGI20173J14856_1010179All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300001536|A1565W1_10709242Not Available734Open in IMG/M
3300001538|A10PFW1_10223169All Organisms → cellular organisms → Bacteria3911Open in IMG/M
3300001593|JGI12635J15846_10547757All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300001661|JGI12053J15887_10091502Not Available1658Open in IMG/M
3300001661|JGI12053J15887_10104375All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300001661|JGI12053J15887_10163785Not Available1157Open in IMG/M
3300001661|JGI12053J15887_10630940All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300001661|JGI12053J15887_10633555All Organisms → cellular organisms → Bacteria → Terrabacteria group508Open in IMG/M
3300002558|JGI25385J37094_10055067All Organisms → cellular organisms → Bacteria1319Open in IMG/M
3300002562|JGI25382J37095_10028281All Organisms → cellular organisms → Bacteria2194Open in IMG/M
3300002562|JGI25382J37095_10274979All Organisms → cellular organisms → Bacteria → Terrabacteria group506Open in IMG/M
3300002853|draft_1001071All Organisms → cellular organisms → Bacteria3149Open in IMG/M
3300002911|JGI25390J43892_10138008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium564Open in IMG/M
3300002912|JGI25386J43895_10170284All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300002914|JGI25617J43924_10024577Not Available2109Open in IMG/M
3300002914|JGI25617J43924_10183503All Organisms → cellular organisms → Bacteria → Terrabacteria group697Open in IMG/M
3300002914|JGI25617J43924_10324416All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300002916|JGI25389J43894_1013631Not Available1384Open in IMG/M
3300002916|JGI25389J43894_1076945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium582Open in IMG/M
3300005171|Ga0066677_10196924Not Available1126Open in IMG/M
3300005171|Ga0066677_10409514Not Available775Open in IMG/M
3300005172|Ga0066683_10151021Not Available1426Open in IMG/M
3300005174|Ga0066680_10116244All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300005179|Ga0066684_11043314All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005180|Ga0066685_10716920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium685Open in IMG/M
3300005187|Ga0066675_10021607All Organisms → cellular organisms → Bacteria3639Open in IMG/M
3300005435|Ga0070714_101360580Not Available693Open in IMG/M
3300005439|Ga0070711_100819887Not Available790Open in IMG/M
3300005446|Ga0066686_10958708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium558Open in IMG/M
3300005446|Ga0066686_10993072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium545Open in IMG/M
3300005450|Ga0066682_10308174Not Available1022Open in IMG/M
3300005467|Ga0070706_101442882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium629Open in IMG/M
3300005471|Ga0070698_101500559All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300005542|Ga0070732_10154000Not Available1369Open in IMG/M
3300005549|Ga0070704_101997713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium538Open in IMG/M
3300005552|Ga0066701_10126054All Organisms → cellular organisms → Bacteria1521Open in IMG/M
3300005557|Ga0066704_10761756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium604Open in IMG/M
3300005560|Ga0066670_10679864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium624Open in IMG/M
3300005561|Ga0066699_10594196Not Available795Open in IMG/M
3300005575|Ga0066702_10834157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium549Open in IMG/M
3300005576|Ga0066708_10033132All Organisms → cellular organisms → Bacteria2776Open in IMG/M
3300005602|Ga0070762_10653368Not Available702Open in IMG/M
3300005614|Ga0068856_100281688All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300005615|Ga0070702_101166122All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005764|Ga0066903_106462370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium611Open in IMG/M
3300006028|Ga0070717_10523481Not Available1073Open in IMG/M
3300006028|Ga0070717_11705956All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300006032|Ga0066696_10279930Not Available1081Open in IMG/M
3300006041|Ga0075023_100435861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium575Open in IMG/M
3300006050|Ga0075028_100649835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium630Open in IMG/M
3300006172|Ga0075018_10595777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium587Open in IMG/M
3300006755|Ga0079222_11797454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium593Open in IMG/M
3300006797|Ga0066659_10330957Not Available1174Open in IMG/M
3300006800|Ga0066660_10554834Not Available964Open in IMG/M
3300006800|Ga0066660_10756469Not Available793Open in IMG/M
3300006804|Ga0079221_10398838Not Available852Open in IMG/M
3300006804|Ga0079221_10722654All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300006854|Ga0075425_102329982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium595Open in IMG/M
3300007076|Ga0075435_100702849Not Available879Open in IMG/M
3300009088|Ga0099830_10172319Not Available1678Open in IMG/M
3300009089|Ga0099828_10552554Not Available1037Open in IMG/M
3300009090|Ga0099827_10718833Not Available863Open in IMG/M
3300009137|Ga0066709_100442348All Organisms → cellular organisms → Bacteria1815Open in IMG/M
3300009137|Ga0066709_102912318All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300010047|Ga0126382_11594230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium605Open in IMG/M
3300010109|Ga0127497_1106583Not Available668Open in IMG/M
3300010335|Ga0134063_10022741All Organisms → cellular organisms → Bacteria2607Open in IMG/M
3300011269|Ga0137392_10276845Not Available1384Open in IMG/M
3300011269|Ga0137392_11184185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium622Open in IMG/M
3300011270|Ga0137391_11100327All Organisms → cellular organisms → Bacteria → Terrabacteria group643Open in IMG/M
3300011271|Ga0137393_11407981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium586Open in IMG/M
3300011444|Ga0137463_1136120Not Available924Open in IMG/M
3300012004|Ga0120134_1089606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium568Open in IMG/M
3300012014|Ga0120159_1156802Not Available623Open in IMG/M
3300012180|Ga0153974_1164846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium525Open in IMG/M
3300012198|Ga0137364_10877264All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300012199|Ga0137383_10615477Not Available794Open in IMG/M
3300012200|Ga0137382_10479765Not Available882Open in IMG/M
3300012203|Ga0137399_10290901All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300012209|Ga0137379_11766709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium514Open in IMG/M
3300012210|Ga0137378_10211738All Organisms → cellular organisms → Bacteria1804Open in IMG/M
3300012349|Ga0137387_10790265Not Available687Open in IMG/M
3300012349|Ga0137387_10824237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium671Open in IMG/M
3300012349|Ga0137387_11194602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium537Open in IMG/M
3300012351|Ga0137386_11110744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium558Open in IMG/M
3300012359|Ga0137385_10160533All Organisms → cellular organisms → Bacteria1975Open in IMG/M
3300012362|Ga0137361_10080699All Organisms → cellular organisms → Bacteria2780Open in IMG/M
3300012362|Ga0137361_11734047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium544Open in IMG/M
3300012918|Ga0137396_10595620Not Available818Open in IMG/M
3300012918|Ga0137396_11010108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium602Open in IMG/M
3300012922|Ga0137394_10489401Not Available1045Open in IMG/M
3300012925|Ga0137419_10026283All Organisms → cellular organisms → Bacteria3497Open in IMG/M
3300012944|Ga0137410_10250458All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300012944|Ga0137410_11229447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium646Open in IMG/M
3300012957|Ga0164303_10936693All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300012977|Ga0134087_10243976Not Available821Open in IMG/M
3300012977|Ga0134087_10565853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium583Open in IMG/M
3300014054|Ga0120135_1014440Not Available923Open in IMG/M
3300014056|Ga0120125_1028901Not Available1184Open in IMG/M
3300014056|Ga0120125_1082579Not Available735Open in IMG/M
3300014150|Ga0134081_10299532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium577Open in IMG/M
3300014157|Ga0134078_10138779All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300015079|Ga0167657_1007934All Organisms → cellular organisms → Bacteria1520Open in IMG/M
3300015241|Ga0137418_10467542Not Available1015Open in IMG/M
3300015245|Ga0137409_10175906All Organisms → cellular organisms → Bacteria1942Open in IMG/M
3300015374|Ga0132255_102566329Not Available779Open in IMG/M
3300016404|Ga0182037_11086187Not Available700Open in IMG/M
3300018468|Ga0066662_10303768Not Available1342Open in IMG/M
3300018468|Ga0066662_11357621All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300018468|Ga0066662_11996539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium607Open in IMG/M
3300020004|Ga0193755_1116872Not Available834Open in IMG/M
3300020581|Ga0210399_10335898Not Available1261Open in IMG/M
3300021086|Ga0179596_10568668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium575Open in IMG/M
3300021478|Ga0210402_10914155Not Available804Open in IMG/M
3300024330|Ga0137417_1211647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium569Open in IMG/M
3300025544|Ga0208078_1104299All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300025911|Ga0207654_11271710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium536Open in IMG/M
3300025929|Ga0207664_11674280All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300026078|Ga0207702_11032564Not Available816Open in IMG/M
3300026277|Ga0209350_1016644All Organisms → cellular organisms → Bacteria2300Open in IMG/M
3300026277|Ga0209350_1106705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium660Open in IMG/M
3300026297|Ga0209237_1058533All Organisms → cellular organisms → Bacteria1884Open in IMG/M
3300026298|Ga0209236_1043428All Organisms → cellular organisms → Bacteria2296Open in IMG/M
3300026301|Ga0209238_1074552All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300026301|Ga0209238_1177425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium628Open in IMG/M
3300026301|Ga0209238_1206662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium576Open in IMG/M
3300026305|Ga0209688_1048248All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300026309|Ga0209055_1056631All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300026309|Ga0209055_1171229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium683Open in IMG/M
3300026315|Ga0209686_1206840All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300026316|Ga0209155_1035687All Organisms → cellular organisms → Bacteria1994Open in IMG/M
3300026318|Ga0209471_1058789All Organisms → cellular organisms → Bacteria1754Open in IMG/M
3300026320|Ga0209131_1157332Not Available1138Open in IMG/M
3300026327|Ga0209266_1093231Not Available1334Open in IMG/M
3300026331|Ga0209267_1095634Not Available1268Open in IMG/M
3300026332|Ga0209803_1119943Not Available1053Open in IMG/M
3300026332|Ga0209803_1240548All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300026334|Ga0209377_1277994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium553Open in IMG/M
3300026335|Ga0209804_1004848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia7668Open in IMG/M
3300026354|Ga0257180_1005322All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300026469|Ga0257169_1022158Not Available908Open in IMG/M
3300026514|Ga0257168_1157080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium507Open in IMG/M
3300026529|Ga0209806_1192701Not Available720Open in IMG/M
3300026530|Ga0209807_1128582Not Available1014Open in IMG/M
3300026532|Ga0209160_1060084All Organisms → cellular organisms → Bacteria2133Open in IMG/M
3300026532|Ga0209160_1136689Not Available1165Open in IMG/M
3300026548|Ga0209161_10040976All Organisms → cellular organisms → Bacteria3106Open in IMG/M
3300026551|Ga0209648_10494155All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300027388|Ga0208995_1051203All Organisms → cellular organisms → Bacteria → Terrabacteria group727Open in IMG/M
3300027546|Ga0208984_1097386Not Available636Open in IMG/M
3300027669|Ga0208981_1036371Not Available1257Open in IMG/M
3300027681|Ga0208991_1043079Not Available1364Open in IMG/M
3300027681|Ga0208991_1214848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium554Open in IMG/M
3300027748|Ga0209689_1241645All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300027765|Ga0209073_10345869All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300027787|Ga0209074_10286111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium654Open in IMG/M
3300027842|Ga0209580_10681928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium508Open in IMG/M
3300027875|Ga0209283_10196930Not Available1339Open in IMG/M
3300027875|Ga0209283_10244959Not Available1189Open in IMG/M
3300027875|Ga0209283_10600794All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300027882|Ga0209590_10785089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium606Open in IMG/M
3300027915|Ga0209069_10483091Not Available694Open in IMG/M
3300028047|Ga0209526_10085885All Organisms → cellular organisms → Bacteria2215Open in IMG/M
3300028673|Ga0257175_1016464Not Available1186Open in IMG/M
3300028787|Ga0307323_10111890Not Available981Open in IMG/M
3300028828|Ga0307312_10081188All Organisms → cellular organisms → Bacteria1983Open in IMG/M
3300031561|Ga0318528_10609867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium585Open in IMG/M
3300031720|Ga0307469_10303961Not Available1316Open in IMG/M
3300031720|Ga0307469_10692271Not Available923Open in IMG/M
3300031720|Ga0307469_11286939All Organisms → cellular organisms → Bacteria → Terrabacteria group694Open in IMG/M
3300031859|Ga0318527_10188779Not Available871Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil18.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil13.33%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost4.44%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.33%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.78%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.22%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.67%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.11%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.11%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.11%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.11%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.11%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.56%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.56%
Hydrocarbon Resource EnvironmentsEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Hydrocarbon Resource Environments0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.56%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.56%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918006Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
3300001086Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3EnvironmentalOpen in IMG/M
3300001154Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1EnvironmentalOpen in IMG/M
3300001412Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002853PDIso9.ppmwps2EnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010109Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012180Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaGHost-AssociatedOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014054Permafrost microbial communities from Nunavut, Canada - A34_5cm_12MEnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015079Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025544Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_C_020634802140918006SoilVNKRPGQIRVTVETGYCSFCDRTRNLRREERQLGALIRTVVACESCHRVLSSTIGVAGADTT
JGI12709J13192_102001523300001086Forest SoilMNKRPGHVEVTTEVNYCSFCDRVRNLRREEHHLGTLVRTVITCETCHRTLSSTMGVAAVEAPADEAAPATAEVKAEAKPQ
JGI12636J13339_100538213300001154Forest SoilMNKRPGHVDVTVETGYCSFCGRPRNLRREAHHLGALVRTIVTCESCHRTLSSSIGVAQAEPAAVEEAAATEV
JGI20173J14856_101017913300001412Arctic Peat SoilMNKRPGHVEVTVETGYCSFCDRVRNLRHEEHHLGTLVRTVITCETCHRTLSSTMGVAAAE
A1565W1_1070924213300001536PermafrostVNKRPGHVVVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIITCETCHRTLSSTIGVAGTAPAEPEP
A10PFW1_1022316913300001538PermafrostMNKRPGHVNVTTELGYCSVCGRPRNLRREEHQLGTFVRTVVTCETCHRTLSSTMGVASEEAPATEQAAAPETEAKAAKSAPA
JGI12635J15846_1054775713300001593Forest SoilMNKRPGHVNVTTELGYCSVCGRPRNLRREEHQLGTFVRTVVTCETCHRTLSSTMGVAGTEAQADQPVEAKSEVEADRPAPVTTRPAA
JGI12053J15887_1009150233300001661Forest SoilMVTTEVAYCSFCARPRTLRSEERHLGTFVRTIVTCETCHRTLSSTMGV
JGI12053J15887_1010437533300001661Forest SoilMNKRPGHVTVTIETGFCSFCGRARNLRREEHQLGTFVRTVVTCETCHRTLSSTMGVASVETEAAAEK
JGI12053J15887_1016378513300001661Forest SoilMNKRPGHVNVTTEVGFCNFCGRPRNLRSEEHQLGTFIRTVLTCETCHRTLSSTMGVADAEPKXAGKA
JGI12053J15887_1063094013300001661Forest SoilMGPMNKRPGHVNVTTEVGFCNFCGRPRNLRSEEHQLGTFVRTVVTCETCHRTLSSTMGVAEAE
JGI12053J15887_1063355523300001661Forest SoilMNKRPGHVVVTTEVGFCSFCGRPRNLRXEAHQLGTLVRTIVTCETCHRTLSSTIGVAAAQPEAEAEAVPAVAEPEPEAGPEPA
P5cmW16_106676013300001664PermafrostMNKRPGHVNVTTEVGFCNFCGRPRNLRSEEHQLGTFVRTVVTCETCHRTLSS
JGI25385J37094_1005506723300002558Grasslands SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCESCHRTLSSSVGVASAEPAAAEEPINA
JGI25382J37095_1002828143300002562Grasslands SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCESCHRTLSSSVGVASAEPAAAEEPIKAEAPAKA
JGI25382J37095_1027497913300002562Grasslands SoilMNKRPGHVEVTTEVGFCSFCGRPRTLRREAHQLGTLVRTLVTCETCHRTLSSTIGIATAETAEPAEAAAVEPVAVQAEAT
draft_100107113300002853Hydrocarbon Resource EnvironmentsMNKRPGHVDVTVETGYCSFCGRTRNLRREEHHLGALVRTIVTCETCHRTLSSSIGVAQAEAAAAEEPAGIEPPAAEAAPA
JGI25390J43892_1013800813300002911Grasslands SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCESCHRTLSSSVGVAVV
JGI25386J43895_1017028423300002912Grasslands SoilMNKRPGHVEVTTEVGFCSFCGRPRTLRREAHQLGTLVRTLVTCETCHRTLSSTIGIATAETA
JGI25617J43924_1002457743300002914Grasslands SoilMNKRPGHVDVTTDVAYCSFCNRTRTLRREAHHLGTLVRTIVTCETCHRTLSSSIGVAQAEPATAEEPA
JGI25617J43924_1018350313300002914Grasslands SoilVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIASAETAEPAEAAAVQPVAEEAETAPTPK
JGI25617J43924_1032441623300002914Grasslands SoilMNKRPGHVAVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIITCESCHRTLSSTIGVAGAAPAEPEPVAPEPAPXAEGRSRS
JGI25389J43894_101363133300002916Grasslands SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCESCHRTLSSSVGVAVVAPEVVEAPAEIEV
JGI25389J43894_107694523300002916Grasslands SoilMNKRPGQVDVITEVGYCPSCGRTRNLRREEHHLGALVRAIVTCETCHRTLSSSIGVASGEQAPAEAEA
Ga0066677_1019692423300005171SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCETCHRTLSS
Ga0066677_1040951413300005171SoilMNKRPGQVRVTTEVGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASPEPVAAEAPVAVEEPAKMTASVPA
Ga0066683_1015102123300005172SoilMNKRPGHVDVATEVGFCNFCSRTRNLRREEHHLGALVRTIVTCETCHRTLSSSVGVA
Ga0066680_1011624413300005174SoilMNKRPGHVEVFTEVGYCSFCDRTRNLRREEHHLGTLVRTIVTCETCHRTLSSSIGVAQAEPAAAEESADVQAAVAEAA
Ga0066684_1104331423300005179SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCETCHRTLSSSVGVAAVEPEPVEA
Ga0066685_1071692023300005180SoilMPLMNKRPGHVNVSTEVAYCSFCGRPRTLRREEHQLGTLVRTIVTCETCHRTLSSSIGVASSEPAAAAEEPKKVEEP
Ga0066675_1002160743300005187SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAAEAPV
Ga0070714_10136058013300005435Agricultural SoilMAKRPGHVDVVTEVGFCNFCGRTRNLRREVHHLGGLLRVVTTCEACHRTLSSTMEVAQAQAE
Ga0070711_10081988723300005439Corn, Switchgrass And Miscanthus RhizosphereMNKRPGHVEVTTEVAYCSFCDRVRNLRREEHHLGTLVRTVITCETCHRTLSSTMGVAPVEAPAD
Ga0066686_1095870823300005446SoilMNKRPGHVDVATEVGFCNFCSRTRNLRREEHHLGALVRTIVTCETCHRTLSSSVGVASSEPAAAEEPATAEAE
Ga0066686_1099307223300005446SoilVNRRPGHVDVTTEVGFCNFCNRTRNLRREQHHLGALVRTIVSCETCHRTLSSS
Ga0066682_1030817423300005450SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAAEAPVAVEE
Ga0070706_10144288213300005467Corn, Switchgrass And Miscanthus RhizosphereMNKRPGHVTVTTEVGYCNFCQRTRNLRREDHQLGQLVRTIVACETCHRTLSSTIGVAAAPPEPAPT
Ga0070698_10150055923300005471Corn, Switchgrass And Miscanthus RhizosphereVNKRPGHVLVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIITCESCHRTLSSTI
Ga0070732_1015400023300005542Surface SoilMNKRPGQLNVFTEVGYCPFCERPRNLRREERHLGALVRMTLTCETCHRTLESTMTVAGAEQPAAAQPPEGSAEPVADQPAPAKK
Ga0070704_10005966443300005549Corn, Switchgrass And Miscanthus RhizosphereVTTEVAYCSFCGRPRTLRREERQLGALVRTVVTCETCHRTLSSTVGV
Ga0070704_10199771313300005549Corn, Switchgrass And Miscanthus RhizosphereMNKRPGHVVVTTEVAMCTFCGRPRTLRNEQHQLGALVRTIVTCETCHRTLSSTI
Ga0066701_1012605413300005552SoilMNKRPGHVEVTTEVGFCSFCGRPRTLRREAHQLGTLVRTLVTCETCHRTLSSTIGIATAETAE
Ga0066704_1076175623300005557SoilMNKRPGHVVVTTEVGFCSFCGRPRNLRNEAHQLGTLVRTIVTCETCHRTLSSTIGVA
Ga0066670_1067986413300005560SoilMNKRPGQVDVITEVGYCPSCGRTRNLRREEHHLGALVRAIVTCETCHRTLSSSIGVASGEQAPAEAE
Ga0066699_1059419613300005561SoilMGQRPGHVTVTTEVGYCSFCNRTRNLRREEHQLGNLVRTIVTCETCHRTLSSAIGVASAEPEVTAEPVQAEAPVISEE
Ga0066702_1083415713300005575SoilMNRRPGHVNVTTEVGFCNFCSRTRNLRSEEHQLGQLVRTIVTCETCHRTLSSTIGVAATPEPVEEEAPAAKP
Ga0066708_1003313243300005576SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCETCHRTLSSSVGVAAVEPEPVEAPVAAAATAAEPPA
Ga0070762_1065336823300005602SoilMNKRPGHVEVTVETGYCSFCDRVRNLRREEHHLGTLVRTVLTCETCHRTLSSTMGVAPAETE
Ga0068856_10028168833300005614Corn RhizosphereVVTTEVAVCTFCGRPRTLRSEQHQLGALVRTIVTCETCHRTLSSTIGVAASEAVAAETPA
Ga0070702_10116612223300005615Corn, Switchgrass And Miscanthus RhizosphereVTTEVAYCTFCGRPRTLRREERQLGALVRTVVTCETCHRTLSSTVGVADAEP
Ga0066903_10646237023300005764Tropical Forest SoilMNRRPGHVKVTTEVGLCGFCGRPRNLRREEHQLGTLVRTIITCETCHRTLSSEIGVAQPEPVAAEPVAEKPVTP
Ga0070717_1052348123300006028Corn, Switchgrass And Miscanthus RhizosphereVNKRPGTVVVTTEVGFCSFCGRPRNLRHEQHQLGTLVRTIITCETCHRTLS
Ga0070717_1170595613300006028Corn, Switchgrass And Miscanthus RhizosphereMSNRPRQVEVVTEVGYCPSCGRTRNLRREEHHLGGLVRTIVTCETCHRTLSSSIGPATVPEPAKAEPEPALEPQTE
Ga0066696_1027993013300006032SoilMNKRPGQVDVITEVGYCPSCGRTRNLRREEHHLGALVRAIVTCETCHRTLSSSIGVASGEQAQAEAEAEVAPAQA
Ga0075023_10043586123300006041WatershedsMCSFCGRPRTLRSEQHQLGALVRTIVTCETCHRTLSSSIAVANLEPA
Ga0075028_10064983523300006050WatershedsMNKRPGHVVVTTEVAMCSFCGRPRTLRNEQHQLGALVRTIVTCETCHRTLSSSIAVASVEPAAPEPAAAEPLS
Ga0075018_1059577713300006172WatershedsMNKRPGHVNVTTEVGFCNFCGRPRNLRSEEHQLGTFVRTVLTCETCHRTLSS
Ga0079222_1179745413300006755Agricultural SoilMNKRPGHVDVTTEVAYCSFCNRTRTLRREEHHLGALVRTIVTCETCHRTLSSSIGVAQAE
Ga0066659_1033095713300006797SoilVVTTEVGFCSFCGRPRTLRSEAHQLGTLVRTIVTCETCHRTLSSSIGVASAEPEPAAAAQEPEPPAP
Ga0066660_1055483423300006800SoilMAKRPGHVEVLTEVGFCNFCNRTRNLRNEEHHLGGLVRTIVTCETCHRTLSSTMGVAETSADAQATVGAPTPP
Ga0066660_1075646913300006800SoilMNKRPGQVDVITEVGYCPSCGRTRNLRREEHHLGALVRAIVTCETCHRTLSSSIGVASGEQPQAEAET
Ga0079221_1039883823300006804Agricultural SoilMNRRPGHVDVTTEVGYCNFCQRPRNLRTEAHHLGTLVRTIVTCETCHRTLSGTMGVATTPEPEPAKVEAQAETAVAEAARPKRA
Ga0079221_1072265413300006804Agricultural SoilMNKRPGHIEVTTEVAYCSFCNRTRTLRREEHHLGTLVRTIVTCETCHRTLSSSIGVAQAEPAA
Ga0075425_10232998223300006854Populus RhizosphereMNKRPGHVIVTTDVAYCNFCGRPRTLRREEHQLGTLVRTIITCETCHRTLSSSIGV
Ga0075435_10070284923300007076Populus RhizosphereMNKRPGHVKVTTEVALCSFCGRPRTLRREEHQLGTLVRTIVTCETCHRTLSSSIGVASAEPPAAAEVAEMPAPASAPEPE
Ga0099830_1017231913300009088Vadose Zone SoilMANPTGQTKVTTEVAFCPFCNRPRNLRREERQLGALVRTTVTCESCHRTLSSSMGVGTAEPA
Ga0099828_1055255413300009089Vadose Zone SoilVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIASAETAEPAEAA
Ga0099827_1071883323300009090Vadose Zone SoilMNKRPGHVEVFTEVGYCSFCDRTRNLRREEHHLGALVRTIVTCETCHRTLSSSIGVAQAEPAAAEVEAPV
Ga0066709_10044234813300009137Grasslands SoilVNRRPGHVDVTTEVGFCNFCNRTRNLRREQHHLGALVRTIVSCETCHRTLSSSVGVASTEPEPAAAPA
Ga0066709_10291231813300009137Grasslands SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCETCHRTLSSEIGV
Ga0126382_1159423013300010047Tropical Forest SoilMAKRPGHVEVVTEVGFCNFCNRTRNLRREEHHLGGLVRTIVSCETCHRTLSSTMGVETAQPEPAPEPVKAEAPVAAAREGKP
Ga0127497_110658323300010109Grasslands SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCESCHRTLSSSVGV
Ga0134063_1002274143300010335Grasslands SoilVNRRPGHVDVTTEVGFCNFCNRTRNLRREQHHLGALVRTIVSCETCHRTLSSSVGVASTEPEPAAAPASQPEPAKAEVVA
Ga0137392_1027684533300011269Vadose Zone SoilMNKRPGHVAVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIITCESCHRTLSSTIGVAG
Ga0137392_1118418523300011269Vadose Zone SoilVVTTEVGFCSFCGRPRNLRHEAHQLGTLVRTIVTCETCHRTLSSTVGIATAEPAAAEPVTEVAAAPAA
Ga0137391_1110032723300011270Vadose Zone SoilVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIASAETAEPAE
Ga0137393_1140798123300011271Vadose Zone SoilMNKRPGHVVVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIITCETCHRTLSSTIGVAGSQAEAPEPV
Ga0137463_113612023300011444SoilMNKRPGHVKVTTEVGYCSVCGRSRNLRREEHQLGTFVRTVVTCETCHRTLSSTMGVANAVEPAPNLDAAAVEA
Ga0120134_108960613300012004PermafrostVNKRPGQITVIVESGFCSFCDRTRNLRREERQLGALVRTVTSCESCHRVLS
Ga0120159_115680213300012014PermafrostVNKRPGHVVVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIIPCETCHRTLSS
Ga0153974_116484613300012180Attine Ant Fungus GardensMNRRPGHIDVVTEVGYCPSCGRTRNLRREEHHLGTLVRTIVTCETCHRTLSSSI
Ga0137364_1087726413300012198Vadose Zone SoilVTVTVETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLTSSIGVAAVEAAAEEIS
Ga0137383_1061547713300012199Vadose Zone SoilMNKRPGHVEVFTEVGYCSFCDRARNLRREEHHLGALVRTIVTCETCHRTLS
Ga0137382_1047976523300012200Vadose Zone SoilMNKRPGHVNVTTEVGYCSFCGRPRTLRREEHQLGTLVRTIVTCETCHRTLSSSIGVASTEPAAAAEEPKKVEEP
Ga0137399_1029090133300012203Vadose Zone SoilMNKRPGQVNVTVEVGYCTVCGRTRNLRREEHHLGALVRTIVSCETCHRTLSSSIGLAS
Ga0137379_1176670923300012209Vadose Zone SoilMNKRPGHVTVSTEVGYCSFCGRPRTLRREDHQLGALVRTIVTCETCHRTLSSSIGVAASEPA
Ga0137378_1021173833300012210Vadose Zone SoilMNKRPGQVSVTTEVAFCNFCGRPRTLRREERQLGTLVRTVITCETCHRTLS
Ga0137387_1079026523300012349Vadose Zone SoilMNKRPGHVVVTTEVAVCSFCGRPRTLRTEQHQLGALVRTIVTCETCHRTLSSSIGVASLEPDALEP
Ga0137387_1082423723300012349Vadose Zone SoilMNKRPGHVTVTTEVGYCNFCQRTRTLRREDHQLGQLVRTIVACETCHRTLSSTIGVAAPPEPVKEEVPVVEAAAAV
Ga0137387_1119460213300012349Vadose Zone SoilMNKRPGQVSVTTEVAFCNFCGRPRTLRREERQLGALVRTVITCETCHRTLSSTVGVATAEQAVAELV
Ga0137386_1111074413300012351Vadose Zone SoilMNKRPGHVTVTTEVGYCNFCQRTRTLRREDHQLGQLVRTIVACETCHRTLSSTIGVAAPPEPVKEEV
Ga0137385_1016053343300012359Vadose Zone SoilVNKRPGHVVVTTEVGFCNFCDRTRNLRREERQLGALVRSVITCESCHRTLSSTMGVASA
Ga0137361_1008069943300012362Vadose Zone SoilVNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGALVRTIITCETCHRTLSSSVGVAAVEPEPSEAPAA
Ga0137361_1173404713300012362Vadose Zone SoilMNKRPGHVTVTTEVGVCSFCGRPRNLRREDHQLGTLVRTIVTCETCHRTLSSSMGVASAESET
Ga0137396_1059562013300012918Vadose Zone SoilMNRRPGQIKVTIETGYCSFCDRTRNLRREERHLGALVRTIVACESCHRTLSSTMGVAGAEPPAAEDAAT
Ga0137396_1077141323300012918Vadose Zone SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAAEAPVAVEEPVETAAPVKAKAPAKP
Ga0137396_1101010823300012918Vadose Zone SoilMCSFCGRPRNLRREEHQLGTFVRTVVTCETCHRTLSSTMGVASTEAPASEGAPVRAEAAV
Ga0137394_1048940113300012922Vadose Zone SoilMNKRPGHVNVTTEAGYCNFCGRPRNLRREEHQLGNFVRTVVTCETCHRTLSSTMGVAS
Ga0137419_1002628343300012925Vadose Zone SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAAEAPVAVEEPAETATPVKA
Ga0137410_1025045813300012944Vadose Zone SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTMVRSIITCESCHRTLSSSVGVATAE
Ga0137410_1122944713300012944Vadose Zone SoilMNKRPGHVNVTTEAGYCNFCGRPRNLRSEEHQLGNFVRTVVTCETCHRTLSSTMGVATQESPDVEAPAKQ
Ga0164303_1093669323300012957SoilMNKRPGTVNVTTEVAFCNFCGRPRTLRREEHQLGNLVRTIVTCETCHRTLSSSIGVASTEPAAAEEPAAVE
Ga0134087_1024397623300012977Grasslands SoilVNRRPGHVDVTTEVGFCNFCNRTRNLRREQHHLGALVRTIVSCETCHRTLSSSVGVASTEPEPAAAPASQPEPAKAEVV
Ga0134087_1056585313300012977Grasslands SoilMNKRPGQVDVITEVGYCPSCGRTRNLRREEHHLGALVRAIVTCETCHRTLSSSI
Ga0120135_101444033300014054PermafrostVNKRPGQIKVTVEVGFCSFCDRTRNLRSEERQLGALVRTVTSCESCHRVLSSTIG
Ga0120125_102890123300014056PermafrostVNKRPGHVVVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIITCETCHRTLSSTIG
Ga0120125_108257923300014056PermafrostMNKRPGHVVVTTEVGVCSFCGRPRNLRIEEHQLGALVRTIVTCETCHRTLSSAIGVVSAEAE
Ga0134081_1029953223300014150Grasslands SoilVNRRPGHVDVTTEVGFCNFCSRTRNLRREEHQLGSLVRTIVTCETCHRTLSSSIGVAPAEPEAPPEPVAEAPKTAAATR
Ga0134078_1013877923300014157Grasslands SoilMNKRPGHVDVATEVGFCNFCSRTRNLRREEHHLGALVRTIVTCETCHRTLSSSVGVAAPEPAAAEEPATAEVEAGAAVEQKPVPK
Ga0167657_100793433300015079Glacier Forefield SoilMNKRPGHVAVTNEVSYCSFCGRARNLRREEHQLGTFVRTVVTCETCHRTLSSTMGVAGGEAPASESA
Ga0137418_1046754233300015241Vadose Zone SoilVNKRPGHVVVTTEVGLCSFCGRPRNLRHEAHQLGTLVRTIVTCETCHRTISSSIGVASAEPEPAPAASESETAP
Ga0137409_1017590613300015245Vadose Zone SoilMNKRPGQVRVTMETGYCSFCGRPRNLRREEHQLGTMVRSIITCESCHRTLSSSVGVASAEPAAVEEPVPAAAPVK
Ga0132255_10256632923300015374Arabidopsis RhizosphereMNKRPGHVNVTTEVGYCSFCGRPRTLRREEHQLGTLVRTIVTCETCHRTLSSSIGVASTEPAAAEEPR
Ga0182037_1108618723300016404SoilMNRRPGHVDVTTEVGYCNFCQRPRNLRSEAHHLGTLVRTIVTCESCHRTLSSTMGVAAA
Ga0066662_1030376823300018468Grasslands SoilMNKRPGHVTVTTEVGVCSFCGRPRNLRREDHQLGTLVRTIVTCETCHRTLSSSMGVASAESETEPAPAEVVTPVKDEAPPAAT
Ga0066662_1135762113300018468Grasslands SoilVNKRPGHVTVTVETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLTSSIGVAAVEAAAEEISGEAPAPIPAPA
Ga0066662_1199653913300018468Grasslands SoilVNKRPGHVVVTTEVGFCSFCGRPRTLRSEAHQLGTLVRTIVTCETCHRTLSSSIGVASAEPEPAPAAS
Ga0193755_111687213300020004SoilMNKRPGHVNVTTEAGYCNFCGRPRNLRSEEHQLGNFVRTVVTCETCHRTLSSTMGVATHESADVEAPAKQEESASAPDTKPAKRTTA
Ga0210399_1033589833300020581SoilMNKRPGHVEVFVETGYCSFCDRVRNLRREEHHLGTLVRTVLTCETCHRTLS
Ga0179596_1056866823300021086Vadose Zone SoilVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIASAETAEPAEAAAVQPV
Ga0210404_1052459323300021088SoilMCSFCGRPRTLRNEQHQLGALVRTIVTCETCHRTLSSSIAVASVEPAAPEPAAAEPLSKPAATAAPDEAYPEDPTSRP
Ga0210402_1091415523300021478SoilMNKRPGHVKVTTEVAYCSVCGRSRTLRREEHQLGTFVRTVVTCETCHRTLSSTMGVAGVEEPATTLD
Ga0137417_121164723300024330Vadose Zone SoilMNKRPGHVVVTTEVGFCSFCGRPRTLRREAHQLGTLVRTLVTCETCHRTLSSTIGIATAETSEPAEAAAAQP
Ga0208078_110429923300025544Arctic Peat SoilMNKRPGHIKVTTEPGYCSFCDRTRNLRREEHQLGTFVRTVVTCESCHRTLSSTMGVASAEGPVSERAPDVGT
Ga0207654_1127171013300025911Corn RhizosphereMNKRPGEVRVTTEVAYCTFCGRPRTLRREERQLGALVRTVVTCETCHRTLSSTVGVADAEPATPDPAEAP
Ga0207664_1167428023300025929Agricultural SoilMNRRPGHVDVTTEVGYCNFCQRPRNLRSEAHHLGTLVRTIVTCETCHRTLSSTMGVATAPEPEPAKIEAQAEAEVVETAKP
Ga0207702_1103256413300026078Corn RhizosphereMNKRPGHVNVTTEVDYCSFCGRPRTLRREEHQLGTLVRTIVTCETCHRTLS
Ga0209350_101664413300026277Grasslands SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAVEAPVAVEEP
Ga0209350_110670513300026277Grasslands SoilMNKRPGHVTVTTEVGVCSFCGRPRNLRREDHQLGTLVRTIVTCETCHRTLSSSMGVASAESETEAAPAEVVTAVKDEAPPTATPK
Ga0209237_105853343300026297Grasslands SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCESCHRTLSSSVGVASAEPAAAEEPINAEAPAQPE
Ga0209236_104342813300026298Grasslands SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCESCHRTLSSSVGVASAEPAAAEEPINAE
Ga0209238_107455213300026301Grasslands SoilMNKRPGQVDVITEVGYCPSCGRTRNLRREEHHLGALVRAIVTCETCHRTLSSSIGVASGEQAPAEAEAP
Ga0209238_117742523300026301Grasslands SoilMNKRPGHVNVTTEAGYCNFCGRPRNLRSEEHQLGNFVRTVVTCETCHRTLSSTMGVATQESPDVEAPAKQEE
Ga0209238_120666213300026301Grasslands SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCESCHRTLSSSVGVAAVEPEVVESPGKV
Ga0209688_104824813300026305SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCETCHRTLSSSVG
Ga0209055_105663113300026309SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAAEAPVAVEEPVEPAAPVKAKA
Ga0209055_117122913300026309SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCESCHRTLSSSVGVAVVAPEVVEAPAEIEVPV
Ga0209686_120684013300026315SoilVTVTVETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLTSSIGVA
Ga0209155_103568743300026316SoilMNKRPGHVTVTTEVGVCSFCGRPRNLRREDHQLGTLVRTIVTCETCHRTLSSSMGVASAESETEAAPAE
Ga0209471_105878913300026318SoilMNKRPGHVVVTTEVGFCSFCGRPRNLRNEAHQLGTLVRTIVTCETCHRTLSSTIAVAAAQPEP
Ga0209131_115733213300026320Grasslands SoilMNKRPGHVNVTTEAGYCNFCGRPRNLRSEEHQLGNFVRTVVTCETCHRTLSSTMGVAT
Ga0209266_109323113300026327SoilVNRRPGHVDVTTEVGFCNFCNRTRNLRREQHHLGALVRTIVSCETCHRTLSSSVGVASTEPEPAAAPASQPE
Ga0209267_109563423300026331SoilMNKRPGHVNVTVETGYCNFCGRTRNLRREEHQLGTLVRTIITCESCHRTLSSSVGVAVVAPEVVEAPAEIEVPVQAAAQP
Ga0209803_111994323300026332SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAVEA
Ga0209803_124054823300026332SoilMNKRPGHVTVTPEVGHCSFCNRTRNLRREEHQLGALVRTIVTCETCHRTLSSSIGVAPEPATAEAPAELEPAELEPAEVEAA
Ga0209377_127799423300026334SoilVNKRPGHVVVTTEVGFCSFCGRPRTLRSEAHQLGTLVRTIVTCETCHRTL
Ga0209804_100484813300026335SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASA
Ga0257180_100532213300026354SoilVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIAS
Ga0257169_102215823300026469SoilVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIASAETAEPAETA
Ga0257168_115708013300026514SoilMNKRPGHVVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIASAE
Ga0209806_119270113300026529SoilMNKRPGQVRVTTEVGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVA
Ga0209807_112858213300026530SoilMNKRPGHVEVFTEVGYCSFCDRARNLRREEHHLGALVRTIVTCETCHRTLSSSIGVAQAEPAAAEQPAEVEVPAAA
Ga0209160_106008453300026532SoilMNKRPGHVVVTTEVGFCSFCGRPRNLRNEAHQLGTLVRTIVTCETCHRTLSSTIGVAGAQPEPEAEP
Ga0209160_113668923300026532SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAA
Ga0209161_1004097613300026548SoilMNKRPGQVRVTIETGYCSFCGRPRNLRREEHQLGTLVRSIVTCETCHRTLSSSVGVASAEPVAVEAPVAVEEPVQTAAPVKA
Ga0209648_1049415523300026551Grasslands SoilVVTTEVAVCSFCGRPRTLRHEEHQLGTLVRTIVTCETCHRTLSSTISVASTPAATPETVAAEPSTAAEPPAAAPKT
Ga0208995_105120333300027388Forest SoilMNKRPGHVVVTTEVGFCSFCGRPRNLRSEAHQLGTLVRTIVTCETCHRTLSSTIGVAAAQPEAEAEDEP
Ga0208984_109738613300027546Forest SoilMNKRPGHVEVTTEVNYCSFCDRVRNLRREEHHLGTLVRTVITCETCHRTLSSTMGV
Ga0208988_115071213300027633Forest SoilMNKRPGHVTVTIETGFCSFCGRARNLRREEHQLGTFVRTVVTCETCHRTLSS
Ga0208981_103637113300027669Forest SoilMNKRPGHVEVTTEVNYCSFCDRVRNLRREEHHLGTLVRTVITCETCHRTLSSTMGVATVETPADEEAKAAPDLEPEVK
Ga0208991_104307933300027681Forest SoilMNKRPGHVTVTIETGFCSFCGRARNLRREEHQLGTFVRTVVTCETCHRTLSST
Ga0208991_121484823300027681Forest SoilMNKRPGHVEVTTEVNYCSFCDRVRNLRREEHHLGTLVRTVITCETCHRTLSSTMGVATVETPADEEAKASPDLEP
Ga0209689_124164513300027748SoilMNKRPGHVTVTTEVGVCSFCGRPRNLRREDHQLGTLVRTIVTCETCHRTLSSSMGVASAESETEAAPAEVVTAVKDEAPPTATPKR
Ga0209073_1034586923300027765Agricultural SoilMNRRPGHVDVTTEVGYCNFCQRPRNLRTEAHHLGTLVRTIVTCETCHRTLSSTMGVATTSEPEPAKVEAQAPDEVVEPA
Ga0209074_1028611123300027787Agricultural SoilMNRRPGHVDVTTEVGYCNFCQRPRNLRTEAHHLGTLVRTIVTCETCHRTLSSTMGVATAAEPEPAKVEAQAKSEVVETAAPKPAA
Ga0209580_1068192813300027842Surface SoilMNRRPGQVNVTTEVAYCSFCGRPRNLRREEHQLGTLVRTIITCETCHRTLSSSMGVATPEPAPQA
Ga0209283_1019693033300027875Vadose Zone SoilMNKRPGHVAVTTEVAVCSFCGRPRTLRREEHQLGTLVRTIITCESCHRTLSSTIGVAGAAPAEPEP
Ga0209283_1024495923300027875Vadose Zone SoilVVTTEVGICSFCGRPRTLRKEAHQLGTLVRTLVTCETCHRTLSSTIGI
Ga0209283_1060079413300027875Vadose Zone SoilMNKRPGHVVVTTEVGFCSFCGRPRNLRHEAHQLGTLVRNIVTCETCHRTLSSTVGIAATEPAAAEPTA
Ga0209590_1078508913300027882Vadose Zone SoilMNKRPGHVKVTTEVGYCSVCGRSRNLRREEHQLGTFVRTVVTCETCHRTLSSTMGVATGEEPATNAE
Ga0209069_1048309113300027915WatershedsMNKRPGHVEVFVETGYCSFCDRVRNLRREEHHLGTLVRTVLTCETCHRTLSS
Ga0209526_1008588543300028047Forest SoilVNKRPGHVVVTTEVGFCSFCGRPRNLRSEAHQLGTLVRTIVTCETCHRTLSSTIGVAGAQPEPEAEPV
Ga0257175_101646423300028673SoilVVTTEVGFCSFCGRPRTLRHEAHQLGTLVRTLVTCETCHRTLSSTIGIASAETAEPAEAAAVQPVAEEAETP
Ga0307323_1011189023300028787SoilMNKRPGHVVVTTEVAFCSFCGRPRTLRTEQHQLGALVRTIVTCESCHRTLSSSIGVAD
Ga0307312_1008118813300028828SoilMNKRPGHVEVTTEVAYCSFCDRVRNLRREEHHLGTLVRTVITCETCHRTLSSTM
Ga0318528_1060986723300031561SoilMNRRPGHVDVTTEVGYCNFCQRPRNLRTEAHHLGTLVRTIVTCETCHRTLSSTMGVATTAPE
Ga0307469_1030396133300031720Hardwood Forest SoilMRSSGEIVTLVRPMNKRPGEVRVTTEVAYCTFCGRPRTLRREERQLGALVRTVITCETCHRTLSSMVGVASPDAPTAELAAPEPAA
Ga0307469_1069227113300031720Hardwood Forest SoilMNKRPGHVNVTTEVAYCNFCGRPRTLRREEHQLGTLVRRIVTCETCHRTLSSSIGVAASEPAAAEEPAKKVESPAPPTPAPDG
Ga0307469_1128693913300031720Hardwood Forest SoilVNKRPGHVVVTTEVGFCSFCGRPRTLRKEAHQLGTLVRTLVTCETCHRTLSSTIGIAMAETAEAA
Ga0318527_1018877913300031859SoilMNRRPGHVDVTTEVGYCNFCQRPRNLRSEAHHLGTLVRTIVTCESCHRTLSSTMGVAAAPEPEPAKVEEPVEKEQE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.