Metagenome / Metatranscriptome Family F032424

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032424
Family Type	Metagenome / Metatranscriptome
Number of Sequences	180
Average Sequence Length	44 residues
Representative Sequence	ACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Number of Associated Samples	120
Number of Associated Scaffolds	180

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.56 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	87.78 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.333 % of family members)
Environment Ontology (ENVO)	Unclassified (45.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.889 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.56% β-sheet: 11.11% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 180 Family Scaffolds
PF04343	DUF488	3.89
PF13460	NAD_binding_10	3.89
PF03279	Lip_A_acyltrans	2.78
PF13378	MR_MLE_C	2.78
PF13432	TPR_16	1.67
PF01553	Acyltransferase	1.67
PF00903	Glyoxalase	1.11
PF13701	DDE_Tnp_1_4	1.11
PF08388	GIIM	1.11
PF00403	HMA	1.11
PF00296	Bac_luciferase	1.11
PF01425	Amidase	1.11
PF00072	Response_reg	0.56
PF13847	Methyltransf_31	0.56
PF06627	DUF1153	0.56
PF00732	GMC_oxred_N	0.56
PF01042	Ribonuc_L-PSP	0.56
PF13602	ADH_zinc_N_2	0.56
PF02771	Acyl-CoA_dh_N	0.56
PF07386	DUF1499	0.56
PF00486	Trans_reg_C	0.56
PF01165	Ribosomal_S21	0.56
PF01609	DDE_Tnp_1	0.56
PF00392	GntR	0.56
PF00271	Helicase_C	0.56
PF01717	Meth_synt_2	0.56
PF00872	Transposase_mut	0.56
PF02798	GST_N	0.56
PF01135	PCMT	0.56
PF13416	SBP_bac_8	0.56
PF01261	AP_endonuc_2	0.56
PF04828	GFA	0.56
PF01547	SBP_bac_1	0.56
PF13229	Beta_helix	0.56
PF13751	DDE_Tnp_1_6	0.56
PF01799	Fer2_2	0.56
PF12531	DUF3731	0.56
PF13649	Methyltransf_25	0.56
PF02518	HATPase_c	0.56
PF03972	MmgE_PrpD	0.56
PF08241	Methyltransf_11	0.56
PF05231	MASE1	0.56
PF13676	TIR_2	0.56
PF01878	EVE	0.56
PF07683	CobW_C	0.56
PF00857	Isochorismatase	0.56
PF00216	Bac_DNA_binding	0.56
PF10518	TAT_signal	0.56
PF03466	LysR_substrate	0.56
PF00326	Peptidase_S9	0.56
PF12833	HTH_18	0.56

COG ID	Name	Functional Category	% Frequency in 180 Family Scaffolds
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	3.89
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	2.78
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	2.78
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.11
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.11
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.11
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	1.11
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.56
COG0523	Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family	General function prediction only [R]	0.56
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.56
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.56
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.56
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.56
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.56
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.56
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.56
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.56
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.56
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.56
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.56
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.56
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.56
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.56
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.56
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.56
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.56
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.56
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.56
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.56
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.56
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.56
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.56
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.56
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
All Organisms	root	All Organisms	49.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
cellular organisms	root	All Organisms → cellular organisms	49.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.11 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.11 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.00 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.56 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.11 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.67 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.67 %
Elioraeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae	1.11 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.11 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.56 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.56 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.11 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.67 %
Elioraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea	1.11 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.11 %
Roseococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseococcus	0.56 %
Lichenicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus	0.56 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.56 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.11 %
Elioraea rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1.11 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.56 %
Mesorhizobium tianshanense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense	0.56 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.56 %
unclassified Roseococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseococcus → unclassified Roseococcus	0.56 %
Lichenicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus → Lichenicoccus roseus	0.56 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.56 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.11 %
Elioraea rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1.11 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.56 %
Roseococcus sp. SYP-B2431	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseococcus → unclassified Roseococcus → Roseococcus sp. SYP-B2431	0.56 %
Mesorhizobium sp. BH1-1-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. BH1-1-5	0.56 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.56 %
Mesorhizobium tianshanense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense	0.56 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.56 %
Lichenicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus → Lichenicoccus roseus	0.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100926586	Not Available	754	Open in IMG/M
3300005171\|Ga0066677_10785330	Not Available	528	Open in IMG/M
3300005187\|Ga0066675_10804695	Not Available	710	Open in IMG/M
3300005332\|Ga0066388_103098815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300005435\|Ga0070714_100423251	All Organisms → cellular organisms → Bacteria → Proteobacteria	1262	Open in IMG/M
3300005437\|Ga0070710_10182616	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300005451\|Ga0066681_10611932	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005536\|Ga0070697_100174244	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300005536\|Ga0070697_100725570	Not Available	877	Open in IMG/M
3300005559\|Ga0066700_10702449	Not Available	693	Open in IMG/M
3300005764\|Ga0066903_100959792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1556	Open in IMG/M
3300006172\|Ga0075018_10443015	Not Available	668	Open in IMG/M
3300007258\|Ga0099793_10158619	Not Available	1074	Open in IMG/M
3300007265\|Ga0099794_10788437	Not Available	508	Open in IMG/M
3300009012\|Ga0066710_104654356	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009038\|Ga0099829_10381550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	1163	Open in IMG/M
3300009143\|Ga0099792_10271879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300009143\|Ga0099792_10771101	Not Available	628	Open in IMG/M
3300009792\|Ga0126374_10694771	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300009792\|Ga0126374_11843259	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010048\|Ga0126373_12207730	Not Available	612	Open in IMG/M
3300010154\|Ga0127503_10241841	Not Available	529	Open in IMG/M
3300010154\|Ga0127503_11108610	Not Available	811	Open in IMG/M
3300010333\|Ga0134080_10445861	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300010359\|Ga0126376_10568429	Not Available	1065	Open in IMG/M
3300010359\|Ga0126376_12363545	Not Available	578	Open in IMG/M
3300010360\|Ga0126372_10395458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1259	Open in IMG/M
3300010361\|Ga0126378_13156915	Not Available	524	Open in IMG/M
3300010376\|Ga0126381_102840246	Not Available	691	Open in IMG/M
3300010398\|Ga0126383_10331593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1534	Open in IMG/M
3300011270\|Ga0137391_10065387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3118	Open in IMG/M
3300011270\|Ga0137391_11434886	Not Available	536	Open in IMG/M
3300012189\|Ga0137388_11904538	Not Available	525	Open in IMG/M
3300012199\|Ga0137383_10069839	Not Available	2529	Open in IMG/M
3300012202\|Ga0137363_10762681	Not Available	820	Open in IMG/M
3300012203\|Ga0137399_10165696	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300012203\|Ga0137399_10274386	All Organisms → cellular organisms → Bacteria → Proteobacteria	1388	Open in IMG/M
3300012203\|Ga0137399_10595165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300012203\|Ga0137399_10826807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense	780	Open in IMG/M
3300012205\|Ga0137362_10295355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1402	Open in IMG/M
3300012205\|Ga0137362_11126486	Not Available	667	Open in IMG/M
3300012210\|Ga0137378_11442881	Not Available	601	Open in IMG/M
3300012361\|Ga0137360_10198331	Not Available	1623	Open in IMG/M
3300012361\|Ga0137360_10395613	All Organisms → cellular organisms → Bacteria → Proteobacteria	1164	Open in IMG/M
3300012361\|Ga0137360_10660158	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300012361\|Ga0137360_11424580	Not Available	596	Open in IMG/M
3300012362\|Ga0137361_10113957	All Organisms → cellular organisms → Bacteria → Proteobacteria	2373	Open in IMG/M
3300012362\|Ga0137361_10220590	Not Available	1721	Open in IMG/M
3300012362\|Ga0137361_10303658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1461	Open in IMG/M
3300012362\|Ga0137361_10943092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus → Lichenicoccus roseus	781	Open in IMG/M
3300012362\|Ga0137361_11400087	Not Available	622	Open in IMG/M
3300012917\|Ga0137395_11144016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300012918\|Ga0137396_10363232	Not Available	1072	Open in IMG/M
3300012922\|Ga0137394_10503945	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300012922\|Ga0137394_10673485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	872	Open in IMG/M
3300012923\|Ga0137359_10217007	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1709	Open in IMG/M
3300012923\|Ga0137359_10372373	Not Available	1269	Open in IMG/M
3300012929\|Ga0137404_10714887	Not Available	906	Open in IMG/M
3300012930\|Ga0137407_12376315	Not Available	507	Open in IMG/M
3300012944\|Ga0137410_11226397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300012948\|Ga0126375_10696415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseococcus → unclassified Roseococcus → Roseococcus sp. SYP-B2431	790	Open in IMG/M
3300012948\|Ga0126375_12082301	Not Available	504	Open in IMG/M
3300012971\|Ga0126369_12146152	Not Available	646	Open in IMG/M
3300015241\|Ga0137418_10627440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300015245\|Ga0137409_10190509	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300015245\|Ga0137409_10583997	Not Available	946	Open in IMG/M
3300016294\|Ga0182041_10095280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. BH1-1-5	2170	Open in IMG/M
3300016294\|Ga0182041_10665305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921	Open in IMG/M
3300016341\|Ga0182035_11098875	Not Available	708	Open in IMG/M
3300016357\|Ga0182032_10297726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1273	Open in IMG/M
3300016357\|Ga0182032_10806298	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300016371\|Ga0182034_11155504	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300016387\|Ga0182040_11297480	Not Available	614	Open in IMG/M
3300016422\|Ga0182039_10881228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	798	Open in IMG/M
3300016445\|Ga0182038_10794916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300016445\|Ga0182038_11736196	Not Available	563	Open in IMG/M
3300016445\|Ga0182038_12174359	Not Available	503	Open in IMG/M
3300016445\|Ga0182038_12189245	Not Available	501	Open in IMG/M
3300018468\|Ga0066662_10785786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921	Open in IMG/M
3300020579\|Ga0210407_10186637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1608	Open in IMG/M
3300020579\|Ga0210407_10299479	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300020579\|Ga0210407_10304168	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300020580\|Ga0210403_11307703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300020581\|Ga0210399_10951142	Not Available	694	Open in IMG/M
3300020581\|Ga0210399_11547680	Not Available	513	Open in IMG/M
3300020583\|Ga0210401_11513533	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300021088\|Ga0210404_10556588	Not Available	650	Open in IMG/M
3300021170\|Ga0210400_10263701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1410	Open in IMG/M
3300021170\|Ga0210400_10752142	Not Available	800	Open in IMG/M
3300021171\|Ga0210405_10758876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300021178\|Ga0210408_10047144	All Organisms → cellular organisms → Bacteria → Proteobacteria	3372	Open in IMG/M
3300021432\|Ga0210384_11676060	Not Available	541	Open in IMG/M
3300021560\|Ga0126371_13934715	Not Available	500	Open in IMG/M
3300022507\|Ga0222729_1042260	Not Available	610	Open in IMG/M
3300022533\|Ga0242662_10273477	Not Available	555	Open in IMG/M
3300022726\|Ga0242654_10013560	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300022726\|Ga0242654_10121427	Not Available	844	Open in IMG/M
3300025898\|Ga0207692_10054939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	2036	Open in IMG/M
3300026507\|Ga0257165_1071662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	634	Open in IMG/M
3300027050\|Ga0209325_1006568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1247	Open in IMG/M
3300027603\|Ga0209331_1012865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2181	Open in IMG/M
3300027655\|Ga0209388_1108874	Not Available	793	Open in IMG/M
3300027783\|Ga0209448_10246137	Not Available	590	Open in IMG/M
3300028047\|Ga0209526_10209734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1346	Open in IMG/M
3300029636\|Ga0222749_10356851	Not Available	767	Open in IMG/M
3300031231\|Ga0170824_110777726	Not Available	668	Open in IMG/M
3300031474\|Ga0170818_100301690	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031474\|Ga0170818_102644945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300031546\|Ga0318538_10035654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2355	Open in IMG/M
3300031546\|Ga0318538_10821860	Not Available	505	Open in IMG/M
3300031561\|Ga0318528_10354258	Not Available	788	Open in IMG/M
3300031561\|Ga0318528_10483968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300031564\|Ga0318573_10452528	Not Available	691	Open in IMG/M
3300031564\|Ga0318573_10602229	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031573\|Ga0310915_10168688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1520	Open in IMG/M
3300031573\|Ga0310915_10483418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	880	Open in IMG/M
3300031573\|Ga0310915_10874411	Not Available	630	Open in IMG/M
3300031668\|Ga0318542_10418896	Not Available	692	Open in IMG/M
3300031679\|Ga0318561_10816109	Not Available	512	Open in IMG/M
3300031680\|Ga0318574_10205119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1133	Open in IMG/M
3300031680\|Ga0318574_10813250	Not Available	547	Open in IMG/M
3300031744\|Ga0306918_11142089	Not Available	602	Open in IMG/M
3300031747\|Ga0318502_10363536	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300031770\|Ga0318521_10664948	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031777\|Ga0318543_10343754	Not Available	668	Open in IMG/M
3300031781\|Ga0318547_10010877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4168	Open in IMG/M
3300031781\|Ga0318547_10466349	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031781\|Ga0318547_11031353	Not Available	514	Open in IMG/M
3300031797\|Ga0318550_10031635	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300031820\|Ga0307473_10744162	Not Available	693	Open in IMG/M
3300031820\|Ga0307473_11222066	Not Available	559	Open in IMG/M
3300031833\|Ga0310917_10349442	Not Available	1003	Open in IMG/M
3300031835\|Ga0318517_10048255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1776	Open in IMG/M
3300031835\|Ga0318517_10557659	Not Available	515	Open in IMG/M
3300031846\|Ga0318512_10540103	Not Available	592	Open in IMG/M
3300031879\|Ga0306919_10328283	Not Available	1165	Open in IMG/M
3300031890\|Ga0306925_10094084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3184	Open in IMG/M
3300031890\|Ga0306925_10871646	Not Available	928	Open in IMG/M
3300031894\|Ga0318522_10059559	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300031894\|Ga0318522_10260650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300031896\|Ga0318551_10676131	Not Available	598	Open in IMG/M
3300031897\|Ga0318520_10341489	Not Available	907	Open in IMG/M
3300031910\|Ga0306923_10009588	All Organisms → cellular organisms → Bacteria → Proteobacteria	9747	Open in IMG/M
3300031910\|Ga0306923_10564200	Not Available	1281	Open in IMG/M
3300031910\|Ga0306923_11629820	Not Available	669	Open in IMG/M
3300031912\|Ga0306921_10430714	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300031912\|Ga0306921_10569361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1312	Open in IMG/M
3300031941\|Ga0310912_10003448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9222	Open in IMG/M
3300031941\|Ga0310912_10665030	Not Available	808	Open in IMG/M
3300031946\|Ga0310910_11421602	Not Available	533	Open in IMG/M
3300031947\|Ga0310909_10020150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4791	Open in IMG/M
3300031954\|Ga0306926_10174471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2666	Open in IMG/M
3300031954\|Ga0306926_10272252	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300031954\|Ga0306926_10752099	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300031954\|Ga0306926_11728823	Not Available	713	Open in IMG/M
3300031959\|Ga0318530_10030615	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300031959\|Ga0318530_10421562	Not Available	553	Open in IMG/M
3300031962\|Ga0307479_10856210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300032001\|Ga0306922_10027951	All Organisms → cellular organisms → Bacteria → Proteobacteria	5709	Open in IMG/M
3300032001\|Ga0306922_10188662	Not Available	2211	Open in IMG/M
3300032035\|Ga0310911_10744354	Not Available	567	Open in IMG/M
3300032042\|Ga0318545_10199986	Not Available	715	Open in IMG/M
3300032043\|Ga0318556_10208992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300032052\|Ga0318506_10282877	Not Available	735	Open in IMG/M
3300032054\|Ga0318570_10587585	Not Available	508	Open in IMG/M
3300032055\|Ga0318575_10267940	Not Available	863	Open in IMG/M
3300032059\|Ga0318533_10527768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300032059\|Ga0318533_10583254	Not Available	820	Open in IMG/M
3300032059\|Ga0318533_11024889	Not Available	605	Open in IMG/M
3300032064\|Ga0318510_10083425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300032064\|Ga0318510_10106368	Not Available	1073	Open in IMG/M
3300032064\|Ga0318510_10454438	Not Available	550	Open in IMG/M
3300032065\|Ga0318513_10049222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1884	Open in IMG/M
3300032076\|Ga0306924_10135530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	2811	Open in IMG/M
3300032076\|Ga0306924_12621709	Not Available	502	Open in IMG/M
3300032090\|Ga0318518_10538177	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300032261\|Ga0306920_104378274	Not Available	506	Open in IMG/M
3300033289\|Ga0310914_10012558	Not Available	6345	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.78%
Aquatic	Environmental → Aquatic	2.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.78%
Freshwater	Environmental → Aquatic → Freshwater	1.67%
Sediment	Environmental → Aquatic → Sediment	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.11%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1009265861	3300002245	Forest Soil	ELYAGCPRDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHAIA*
Ga0066677_107853301	3300005171	Soil	ACPNDRPNHIGMAVQRHIRAGRIRERDGKLYATPPATEQAHATT*
Ga0066675_108046951	3300005187	Soil	PSDRPNHVGIAVQRHIRAGRIQERDGKLYATSTATEQARATA*
Ga0066388_1030988151	3300005332	Tropical Forest Soil	ATGKTRQELYVACPTDRPNHVGMAVQRHIRAGRIQERDGKLYATPTAMEQAHATA*
Ga0070714_1004232511	3300005435	Agricultural Soil	SDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAQATA*
Ga0070710_101826163	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAPATA*
Ga0066681_106119321	3300005451	Soil	RQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAQATA*
Ga0070697_1001742441	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AACPSDRPNHVGIAVQRHIRAGRIQERDGKFYATSTATERARATA*
Ga0070697_1007255702	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LYAACPSDRPNHIGMAVQRHIRAGRIQERDGKLYATSTATERARATA*
Ga0066700_107024491	3300005559	Soil	GKTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQAHATA*
Ga0066903_1009597921	3300005764	Tropical Forest Soil	NHVGMAVQRHIRAGRIQERDGKLYATSTAAQQAPATA*
Ga0075018_104430152	3300006172	Watersheds	RPNHVGIAVQRHIRAGRIQERDGKLYATPTATERARATA*
Ga0099793_101586193	3300007258	Vadose Zone Soil	CPTDRPNHVGMAVQRHIRAGRIQERDGKLYATSPPTEQVPATA*
Ga0099794_107884371	3300007265	Vadose Zone Soil	NDRPNHIGMAVQRHIRAGRIQERDGKLHATPSATEQAHATA*
Ga0066710_1046543562	3300009012	Grasslands Soil	SDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATAQA
Ga0099829_103815501	3300009038	Vadose Zone Soil	KTRRELYAACPNDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0099792_102718791	3300009143	Vadose Zone Soil	TDRPNHVGMAVQRHIRAGRIQERDGKLHATPPATEQAHATA*
Ga0099792_107711011	3300009143	Vadose Zone Soil	SDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0126374_106947713	3300009792	Tropical Forest Soil	PNDRPNHVGIAVQRHLRAGRIQERDGKLYATPTAADQDRATA*
Ga0126374_118432591	3300009792	Tropical Forest Soil	RREIYLACPSDRPNVVGMAVQRHIRAGRIQERDGKLYATSPAPEQAHARG*
Ga0126373_122077301	3300010048	Tropical Forest Soil	AACPSDRPNHVGIAVQRHIRAGRIQERDGKLYATPTATDQDHATA*
Ga0127503_102418412	3300010154	Soil	LYVACPNDRPNHIGMAVQRHIRAGRIQERDGKLHATPPATEQAHATA*
Ga0127503_111086101	3300010154	Soil	KTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0134080_104458611	3300010333	Grasslands Soil	TRQELYAACPSDRPNHVGISVQRHIRAGRIQERDGKLYATPTATEQVQATA*
Ga0126376_105684291	3300010359	Tropical Forest Soil	NHIGIAVQRHLRAGRIQERDGKLYATSSATEQARATA*
Ga0126376_123635451	3300010359	Tropical Forest Soil	AACPSDRPNHVGIAVQRHIRAGRIQERHGKLYTTSTPAEQARETA*
Ga0126372_103954581	3300010360	Tropical Forest Soil	NDRPNHVGIAVQRHIRAGRIQERDGKLYATLITTDQDRATA*
Ga0126378_131569152	3300010361	Tropical Forest Soil	YAACPSDRPNHVGIAVQRHIRAGRIQERDGKLYATSTATERPRATA*
Ga0126381_1028402461	3300010376	Tropical Forest Soil	ATGKTRQELYAACPSDRPNHVGIAVQRHIRAGRIQERDGKLYATPTATDQDHATA*
Ga0126383_103315931	3300010398	Tropical Forest Soil	KTRQELYAACPGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTAMEQAHATA*
Ga0137391_100653871	3300011270	Vadose Zone Soil	GKTRQELYVACPTDRPNHVGMAVQRHIRAGRIQERDGKLYAISATEQAHATA*
Ga0137391_114348861	3300011270	Vadose Zone Soil	YAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0137388_119045381	3300012189	Vadose Zone Soil	SDRPNHVGMAVQRHIRGGRIQERDGKLYATPTATEQAHATA*
Ga0137383_100698391	3300012199	Vadose Zone Soil	ACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0137363_107626812	3300012202	Vadose Zone Soil	TGDRPNHVGIAVQRHIRAGRIQERDGKLYATPTAAEQAHATA*
Ga0137399_101656962	3300012203	Vadose Zone Soil	DRPNHVGMAVQRHIRAGRIQERDGKLHATPPATEQAHATA*
Ga0137399_102743861	3300012203	Vadose Zone Soil	RPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQVPATA*
Ga0137399_105951652	3300012203	Vadose Zone Soil	PSDRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAPATA*
Ga0137399_108268072	3300012203	Vadose Zone Soil	YAACPSDRPNHIGMAAQRHIRAGRIRERDGKFYATSTATEQARATA*
Ga0137362_102953554	3300012205	Vadose Zone Soil	AWRYKRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0137362_111264862	3300012205	Vadose Zone Soil	AACPSDRTNHVGIAVQRHVRAGRVQERDGKLYATPTATDQDHATA*
Ga0137378_114428812	3300012210	Vadose Zone Soil	LYVACPNDRPNHIGMAVQRHIRAGRIQERDGKLHATPSATEQAHARA*
Ga0137360_101983311	3300012361	Vadose Zone Soil	RPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAPATA*
Ga0137360_103956133	3300012361	Vadose Zone Soil	ELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0137360_106601582	3300012361	Vadose Zone Soil	CPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQVHPTA*
Ga0137360_114245801	3300012361	Vadose Zone Soil	DRPNHVGIAVQRHIRAGRIEARDGKLYATSSATEQAHPAA*
Ga0137361_101139571	3300012362	Vadose Zone Soil	KTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQAHATA*
Ga0137361_102205901	3300012362	Vadose Zone Soil	KTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA*
Ga0137361_103036581	3300012362	Vadose Zone Soil	NHVGIAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0137361_109430921	3300012362	Vadose Zone Soil	QELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYSTPTATEQARATA*
Ga0137361_114000871	3300012362	Vadose Zone Soil	VGIAVQRHIRAGRIQERDGKLYATSTATERARATA*
Ga0137395_111440161	3300012917	Vadose Zone Soil	QELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAPATA*
Ga0137396_103632323	3300012918	Vadose Zone Soil	YAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQVPATA*
Ga0137394_105039451	3300012922	Vadose Zone Soil	AACPGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0137394_106734853	3300012922	Vadose Zone Soil	ELYTACPNDRPNHIGIAVQRHIRAGRIQERDGKLYATSPATEQAHAAA*
Ga0137359_102170071	3300012923	Vadose Zone Soil	KTRQELYAVCPGDRPNHVGMAVQRHIRAGRIQEGDGKLYATPTATEQAHATA*
Ga0137359_103723731	3300012923	Vadose Zone Soil	ELYAACPGDRPNHVGMAVQRHIRAGRIEERDGKLYATPTATEQAHAPA*
Ga0137404_107148871	3300012929	Vadose Zone Soil	QELYAACPSDRPNHVGIAVQRHIRAGRIQERDGKLYATPTATEQAQATA*
Ga0137407_123763151	3300012930	Vadose Zone Soil	NDRPNHVGIAVQRHIRAGRIEERDGKLYATSPTTAQAHAAA*
Ga0137410_112263972	3300012944	Vadose Zone Soil	PNHVGMAVQRHIRAGRIQERDGKLHATPTATEQAHATA*
Ga0126375_106964151	3300012948	Tropical Forest Soil	KTRQELYAACSGDRPNHVGIAVQRHIRAGQERDGKLYATSTATGRDHATA*
Ga0126375_120823012	3300012948	Tropical Forest Soil	DRPNHVGIAVQRHIRAGRIQERDGKLYATPTATDQDHATA*
Ga0126369_121461521	3300012971	Tropical Forest Soil	KTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATATAAEQAPATA*
Ga0137418_106274402	3300015241	Vadose Zone Soil	ELYVACPNDRPNHIGMAVQRHIRAGRIQERDGKLHATPSATEQAHATA*
Ga0137409_101905091	3300015245	Vadose Zone Soil	RPNHVGMAVQRHIRAGRIQERDGKLHATPPATEQAHATA*
Ga0137409_105839971	3300015245	Vadose Zone Soil	RPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA*
Ga0182041_100952804	3300016294	Soil	RPNHVGIAVQRHIRAGRIQERDGKLYATSTATERAHATA
Ga0182041_106653051	3300016294	Soil	YAACPSDRPNHVGIAVQRHIRAGWIQERDGKLYATSTATERARATA
Ga0182035_110988752	3300016341	Soil	PNHVGMAVQRHIRAGRIQERDGKLYATSTATERVRATA
Ga0182032_102977261	3300016357	Soil	AACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQSHATA
Ga0182032_108062981	3300016357	Soil	NHVGIAVQRHLRAGRIQERDGKLYATSPAMKQSRATA
Ga0182034_111555041	3300016371	Soil	DSPNHVGIEVQRHLCAGRIQERDGKLYATSPAMKQSRATA
Ga0182040_112974801	3300016387	Soil	PNHVGIAVQRHIRAGRIQERDGKLYATSTATERAHHPTA
Ga0182039_108812283	3300016422	Soil	ACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0182038_107949161	3300016445	Soil	CPSDRPNHVGIAVQRHIRAGWIQERDGKLYATSTETERARATA
Ga0182038_117361961	3300016445	Soil	HVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0182038_121743592	3300016445	Soil	YRACPNDRPNHIGMAVQRHIRAGRIQERDGKLYATSPAT
Ga0182038_121892452	3300016445	Soil	YAACPSDRPNHIGIAVQRHIRAGRIQERDGKLYATSTATERVRATA
Ga0066662_107857862	3300018468	Grasslands Soil	NHIGMAVQRHIRAGRIRERDGKLHATPPATEQAHATA
Ga0210407_101866371	3300020579	Soil	RPNHVGIAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0210407_102994793	3300020579	Soil	SNHVGMAVQRHIRAGRIQERDGKLYATATATEQAHATA
Ga0210407_103041681	3300020579	Soil	GKTRQELYAACPSDRPNHVGIAVQRHIRAGRIQERDGKLYTTPTATELDQATA
Ga0210403_113077032	3300020580	Soil	YVACPTDRPNHIGMAVQRHIRAGRIHERDGKLYATSPAAEQAHATA
Ga0210399_109511422	3300020581	Soil	ELYAACPSDRPNHVGIAVQRHIRAGRIQERDGKLYTTPTATELDQATA
Ga0210399_115476802	3300020581	Soil	CPSDRPNHVGIAVQRHIRAGRIQERDGKLYATSTATEQVRATA
Ga0210401_115135332	3300020583	Soil	SPGDRPNHVGMAVQRHIRAGRIQERGGKLYAISTAAE
Ga0210404_105565881	3300021088	Soil	VGIAVQRHIRAGRIQERDGKFYATSTATERARATA
Ga0210400_102637012	3300021170	Soil	PSDRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAPATA
Ga0210400_107521422	3300021170	Soil	RPNHIGMAVQRHIRAGRIQERDGKLYATSTATERARATA
Ga0210405_107588761	3300021171	Soil	TRQQFYAACPSDRPNHVGIALQRHIRAGRIQERDGKLYATPTATDQGHSTA
Ga0210408_100471441	3300021178	Soil	NHVGIALQRHIRAGRIQERDGKLYATPTATDQDHSTA
Ga0210384_116760601	3300021432	Soil	PSDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQVRATA
Ga0126371_139347152	3300021560	Tropical Forest Soil	GKTRRELYLACPKDRPNVIGMAVQRHIRAGRIEERDGKLYASPAAQEQAHAAV
Ga0222729_10422601	3300022507	Soil	LYAACPSDRPNHIGMAVQRHIRAGRIQERDGKLYATSTATERARATA
Ga0242662_102734771	3300022533	Soil	NHVGMAVQRHIRAGRIQERDGKLYATPTVTEQAHATA
Ga0242654_100135602	3300022726	Soil	AVCPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTAREQAPATA
Ga0242654_101214271	3300022726	Soil	ACPSDRPNHIGMAVQRHIRAGRIQERDGKLYATSTATERARATA
Ga0207692_100549393	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	DRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAPATA
Ga0257165_10716622	3300026507	Soil	TGKTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0209325_10065682	3300027050	Forest Soil	MPSVGVPSDRPKHVGMAVQRHIRAGRIQERDGKLYATSTATERARATA
Ga0209331_10128654	3300027603	Forest Soil	AGKTRQELYVACPTDRPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAPATA
Ga0209388_11088742	3300027655	Vadose Zone Soil	KTRQELYAACPSDRPNHVGMAVQRHIRAGRIQERDGKLYATSATEQAHATA
Ga0209448_102461371	3300027783	Bog Forest Soil	WLPVRPDGNYLACPNDRPNVIGMAIQRHIRAGRIHERDGKLYLTPPALAQAHAAG
Ga0209526_102097341	3300028047	Forest Soil	HVGMAVQRHIRAGRIQERDGKLYATSPAAAQAHATA
Ga0222749_103568511	3300029636	Soil	KTRQELYAACPSDRPNHVGIAVRRHIRAGRIQERDGKFYATSTATERARATA
Ga0170824_1107777261	3300031231	Forest Soil	RQELYVACPNDRPNHIGMAVQRHIRAGRIQERDGKLYATPPATEQAHAIA
Ga0170818_1003016902	3300031474	Forest Soil	ELYAACTGDRPNHVGIAVQRHIRAGRIQERDGKLYATPTATEQAQATA
Ga0170818_1026449452	3300031474	Forest Soil	NHVGIAVQRHIRAGRIAERDGKLYATSPAAEQAPATA
Ga0318538_100356541	3300031546	Soil	RPNHVGIAVQRHIRAGWIQERDGKLYATSTETERARATA
Ga0318538_108218602	3300031546	Soil	LATGIGIAVQRHIRAGRIQDRDGKLYATSTATERARATA
Ga0318528_103542582	3300031561	Soil	HVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0318528_104839681	3300031561	Soil	PGDRPNHVGMAVQRHIRAGRIQERGGKLYAISTAAE
Ga0318573_104525281	3300031564	Soil	YAACPGDRPNHVGIAVQRHIRAGRIQERDGKLYATSTATERVRATA
Ga0318573_106022291	3300031564	Soil	ACPGDRPNHVGMAVQRHIRAGRIQERGGKLYAISTAAE
Ga0310915_101686881	3300031573	Soil	NFYAACPSDRPNHIGIAVQRHIRAGRIQDRDGKLYATSTTTERARATA
Ga0310915_104834183	3300031573	Soil	RPNHIGVVVQRHLRAGRIQERDGKLYATSPVTDQARATT
Ga0310915_108744111	3300031573	Soil	RPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318542_104188961	3300031668	Soil	IGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318561_108161091	3300031679	Soil	VGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0318574_102051193	3300031680	Soil	AACNSDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318574_108132501	3300031680	Soil	AACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0306918_111420891	3300031744	Soil	GKTRQELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQAHATA
Ga0318502_103635361	3300031747	Soil	RELYAACPGDRPNHVGMAVQRHIRAGRIQERGGKLYAISTAAE
Ga0318521_106649482	3300031770	Soil	PNHVGMAVQRHIRAGRIQERDGKLYATPTATQQAHATA
Ga0318543_103437541	3300031777	Soil	NHVGIAVQRHIRAGRIQERDGKLYATSTATERAHHPTA
Ga0318547_100108771	3300031781	Soil	PSDRPNHVGIAVQRHIRAGWIQERDGKLYATSTATERARATA
Ga0318547_104663491	3300031781	Soil	RELYAASPGDRPNHVGMAVQRHIRAGRIQERGGKLYAISTAAE
Ga0318547_110313531	3300031781	Soil	CIGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318550_100316352	3300031797	Soil	CPSDRPNHIGIAVQRHIRAGRIQDRDGKLYATSTTTERARATA
Ga0307473_107441622	3300031820	Hardwood Forest Soil	RPNHVGIAVQRHIRAGRIEERDGKLYATLPATEQAHAAA
Ga0307473_112220661	3300031820	Hardwood Forest Soil	CPSDRPNHVGIAVQRHIRAGRIQERDGKLYATSTATERARATA
Ga0310917_103494421	3300031833	Soil	YAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQSHATA
Ga0318517_100482551	3300031835	Soil	NHVGIAVQRHIRAGWIQERDGKLYATSTETERARATA
Ga0318517_105576591	3300031835	Soil	QELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318512_105401031	3300031846	Soil	GKTRQELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0306919_103282832	3300031879	Soil	TRQELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQSHATA
Ga0306925_100940844	3300031890	Soil	CTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0306925_108716461	3300031890	Soil	KTRQELYAACNGDRPNHVGMAVQRHIRAGRIQERDGKLYAIPTATEQAHATA
Ga0306925_112601951	3300031890	Soil	AACPGDRPNHVGIAVQRHIRAGRIQEREGKLYAISTAAE
Ga0318522_100595593	3300031894	Soil	GDRPNHVGMAVQRHIRAGRIQERGGKLYAISTAAE
Ga0318522_102606501	3300031894	Soil	PNHIGIAVQRHIRAGRIQERDGKLYATSTATERARATA
Ga0318551_106761311	3300031896	Soil	NHVGIAVQRHIRAGRIHERDGKLYATPTAADQDRATA
Ga0318520_102993241	3300031897	Soil	RELYAACPGDRPNHVGIAVQRHIRAGRIQEREGKLYAVPTAAE
Ga0318520_103414891	3300031897	Soil	LATGKTRQELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0306923_100095881	3300031910	Soil	DRPNHVGMAVQRHIRAGRIQERDGKLYATPTATQQAHATA
Ga0306923_105642003	3300031910	Soil	GKTRQELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQSHATA
Ga0306923_116298203	3300031910	Soil	NHVGIAVQRHIRAGRIQERDGKLYATSTATERARATA
Ga0306921_104307141	3300031912	Soil	LPFTRQELYPACPNDRPNHVGIAVQRHIRAGRIHERDGKLYATPTAADQDRATA
Ga0306921_105693611	3300031912	Soil	LYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQSHATA
Ga0310912_100034481	3300031941	Soil	HVGIAVQRHIRAGRIQERDGKLYATSTATERAHATA
Ga0310912_106650301	3300031941	Soil	TGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQAHATA
Ga0310910_114216022	3300031946	Soil	PNHVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0310909_100201501	3300031947	Soil	QELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATQQAHATA
Ga0306926_101744711	3300031954	Soil	NHVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0306926_102722521	3300031954	Soil	VGMAVQRHIRAGRIQERDGKLYATPTATQQAHATA
Ga0306926_107520991	3300031954	Soil	QELYAACNGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0306926_117288232	3300031954	Soil	ACPNDRPNHIGAAVQRHIRAGRIQERDGKLYATSPTLEQVDATA
Ga0318530_100306152	3300031959	Soil	PSDRPNHIGIAVQRHIRAGRIQDRDGKLYATSTTTERARATA
Ga0318530_104215621	3300031959	Soil	DRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0307479_108562103	3300031962	Hardwood Forest Soil	RPNHVGMAVQRHIRAGRIQERDGKLYATSPATEQAHATA
Ga0306922_100279511	3300032001	Soil	AACPSDRPNHVGIAVQRHIRAGRIQERDGKLYATSTATERANATA
Ga0306922_101886621	3300032001	Soil	ACPNDRPNHIGMAVQRHIRAGRIQERDGKLYATSPAT
Ga0310911_107443541	3300032035	Soil	GRTRQELYRACPKDRPNHIGMAVQRHIRAGRIQERDGKLYAISPAT
Ga0318545_101999861	3300032042	Soil	NHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318556_102089921	3300032043	Soil	ACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQSHATA
Ga0318506_102828771	3300032052	Soil	LYAACIGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318570_105875851	3300032054	Soil	LYAACNGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318575_102679401	3300032055	Soil	CTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318533_105277681	3300032059	Soil	ELYAACIGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318533_105832541	3300032059	Soil	TGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0318533_110248892	3300032059	Soil	PGDRPNHVGIAVQRHIRAGRIQERDGKLYATSTATERVRATA
Ga0318510_100834252	3300032064	Soil	HVGIAEQRHIRAGRIQERDGKLYAISTSTDRDHTTA
Ga0318510_101063682	3300032064	Soil	ELYRACPNDRPNHIGMAVQRHIRAGRIQERDGKLYATSPAT
Ga0318510_104544381	3300032064	Soil	ATGKTRQELYAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA
Ga0318513_100492223	3300032065	Soil	ELYAACPSDRPNHVGIAVQRHIRAGWIQERDGKLYATSTETERARATA
Ga0306924_101355303	3300032076	Soil	YAACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQARATA
Ga0306924_126217091	3300032076	Soil	AACTGDRPNHVGMAVQRHIRAGRIQERDGKLYATSTATEQAHATA
Ga0318518_105381772	3300032090	Soil	ELYAACPGDRPNHVGMAVQRHIRAGRIQERGGKLYAISTAAE
Ga0306920_1043782742	3300032261	Soil	DRPNHVGIAVQRHIRAGRIQERDGKLYATSTATERAHATA
Ga0310914_100125581	3300033289	Soil	GDRPNHVGMAVQRHIRAGRIQERDGKLYATPTATEQAHATA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032424

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences