Metagenome / Metatranscriptome Family F032690

Basic Information
Family ID	F032690
Family Type	Metagenome / Metatranscriptome
Number of Sequences	179
Average Sequence Length	55 residues
Representative Sequence	VKELSLEEVLRIAGGVPLSAALDELTYRAPEESGSDPIDYAHLLGAGLRPTEPT
Number of Associated Samples	153
Number of Associated Scaffolds	179

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.68 %
% of genes near scaffold ends (potentially truncated)	22.35 %
% of genes from short scaffolds (< 2000 bps)	86.59 %
Associated GOLD sequencing projects	137
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Unclassified (55.866 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.173 % of family members)
Environment Ontology (ENVO)	Unclassified (40.782 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.251 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.05% β-sheet: 0.00% Coil/Unstructured: 71.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 179 Family Scaffolds
PF00009	GTP_EFTU	16.76
PF03681	Obsolete Pfam Family	8.94
PF02517	Rce1-like	3.91
PF15919	HicB_lk_antitox	2.79
PF14492	EFG_III	2.23
PF13437	HlyD_3	1.12
PF02646	RmuC	0.56
PF11104	PilM_2	0.56
PF11198	DUF2857	0.56
PF02897	Peptidase_S9_N	0.56
PF00563	EAL	0.56
PF00892	EamA	0.56

COG ID	Name	Functional Category	% Frequency in 179 Family Scaffolds
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	3.91
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	3.91
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	0.56
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.56
COG1770	Protease II	Amino acid transport and metabolism [E]	0.56
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.56
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.56
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.56
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.56

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
All Organisms	root	All Organisms	44.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
cellular organisms	root	All Organisms → cellular organisms	44.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.58 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.12 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.56 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	25.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.12 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	20.67 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.12 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.12 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.56 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	20.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Chlorophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	20.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.12 %
CS clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	20.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.12 %
Chlamydomonadales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	20.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.12 %
Dunaliellaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	20.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.12 %
Dunaliella	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.87 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	20.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.12 %
Dunaliella tertiolecta	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02GQ28X	Not Available	527	Open in IMG/M
2199352024\|deeps__Contig_172721	Not Available	3127	Open in IMG/M
2199352024\|deeps__Contig_84209	Not Available	767	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105741887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1102	Open in IMG/M
3300000955\|JGI1027J12803_103138324	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300002907\|JGI25613J43889_10006804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	3130	Open in IMG/M
3300002917\|JGI25616J43925_10075125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1422	Open in IMG/M
3300003321\|soilH1_10213754	All Organisms → cellular organisms → Bacteria → Proteobacteria	2399	Open in IMG/M
3300003324\|soilH2_10121176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3017	Open in IMG/M
3300004114\|Ga0062593_102222897	Not Available	615	Open in IMG/M
3300004114\|Ga0062593_102372060	Not Available	598	Open in IMG/M
3300004157\|Ga0062590_101483389	Not Available	679	Open in IMG/M
3300004463\|Ga0063356_101430715	Not Available	1019	Open in IMG/M
3300004463\|Ga0063356_102812117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	749	Open in IMG/M
3300004643\|Ga0062591_102321603	Not Available	560	Open in IMG/M
3300004778\|Ga0062383_10416767	Not Available	663	Open in IMG/M
3300005093\|Ga0062594_100502456	All Organisms → cellular organisms → Bacteria → Proteobacteria	1026	Open in IMG/M
3300005093\|Ga0062594_101291999	Not Available	731	Open in IMG/M
3300005175\|Ga0066673_10437481	Not Available	768	Open in IMG/M
3300005176\|Ga0066679_11013388	Not Available	516	Open in IMG/M
3300005184\|Ga0066671_10553152	Not Available	742	Open in IMG/M
3300005327\|Ga0070658_10004871	All Organisms → cellular organisms → Bacteria	10934	Open in IMG/M
3300005334\|Ga0068869_100827446	Not Available	797	Open in IMG/M
3300005337\|Ga0070682_100814163	Not Available	760	Open in IMG/M
3300005338\|Ga0068868_100313523	All Organisms → cellular organisms → Bacteria → Proteobacteria	1335	Open in IMG/M
3300005340\|Ga0070689_100419507	Not Available	1134	Open in IMG/M
3300005343\|Ga0070687_101215127	Not Available	556	Open in IMG/M
3300005355\|Ga0070671_100175520	All Organisms → cellular organisms → Bacteria → Proteobacteria	1813	Open in IMG/M
3300005356\|Ga0070674_100553891	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005365\|Ga0070688_101028412	Not Available	656	Open in IMG/M
3300005434\|Ga0070709_10327511	Not Available	1126	Open in IMG/M
3300005434\|Ga0070709_10391555	Not Available	1036	Open in IMG/M
3300005438\|Ga0070701_10256963	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300005440\|Ga0070705_100189700	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005441\|Ga0070700_101173430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	640	Open in IMG/M
3300005444\|Ga0070694_101178001	Not Available	641	Open in IMG/M
3300005445\|Ga0070708_102171041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	513	Open in IMG/M
3300005468\|Ga0070707_101860229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	569	Open in IMG/M
3300005471\|Ga0070698_100965097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	799	Open in IMG/M
3300005518\|Ga0070699_101060729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	743	Open in IMG/M
3300005538\|Ga0070731_10003041	All Organisms → cellular organisms → Bacteria → Proteobacteria	15375	Open in IMG/M
3300005539\|Ga0068853_100809536	Not Available	897	Open in IMG/M
3300005545\|Ga0070695_100988253	Not Available	684	Open in IMG/M
3300005547\|Ga0070693_100052961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2328	Open in IMG/M
3300005547\|Ga0070693_100454846	Not Available	899	Open in IMG/M
3300005548\|Ga0070665_100996620	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005578\|Ga0068854_100814749	Not Available	815	Open in IMG/M
3300005718\|Ga0068866_10510625	Not Available	797	Open in IMG/M
3300005764\|Ga0066903_100558009	Not Available	1967	Open in IMG/M
3300005764\|Ga0066903_103815476	Not Available	810	Open in IMG/M
3300005892\|Ga0075275_1051324	Not Available	659	Open in IMG/M
3300005993\|Ga0080027_10129386	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300005994\|Ga0066789_10152163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	983	Open in IMG/M
3300006047\|Ga0075024_100006578	All Organisms → cellular organisms → Bacteria → Proteobacteria	4674	Open in IMG/M
3300006237\|Ga0097621_100547298	Not Available	1053	Open in IMG/M
3300006358\|Ga0068871_100196982	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300006358\|Ga0068871_100925435	Not Available	809	Open in IMG/M
3300006755\|Ga0079222_10969925	Not Available	725	Open in IMG/M
3300006755\|Ga0079222_10996115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	719	Open in IMG/M
3300006806\|Ga0079220_10648656	Not Available	763	Open in IMG/M
3300006854\|Ga0075425_101841148	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300006871\|Ga0075434_101072868	Not Available	819	Open in IMG/M
3300006876\|Ga0079217_10320931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	870	Open in IMG/M
3300006894\|Ga0079215_10137561	Not Available	1144	Open in IMG/M
3300006894\|Ga0079215_10703562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	684	Open in IMG/M
3300006954\|Ga0079219_12197222	Not Available	531	Open in IMG/M
3300007004\|Ga0079218_13689404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	520	Open in IMG/M
3300009078\|Ga0105106_10106971	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300009087\|Ga0105107_11136197	Not Available	545	Open in IMG/M
3300009089\|Ga0099828_10165905	Not Available	1959	Open in IMG/M
3300009093\|Ga0105240_10480513	Not Available	1385	Open in IMG/M
3300009094\|Ga0111539_10936731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1007	Open in IMG/M
3300009098\|Ga0105245_10577538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300009098\|Ga0105245_11284276	Not Available	781	Open in IMG/M
3300009137\|Ga0066709_100809420	Not Available	1358	Open in IMG/M
3300009162\|Ga0075423_10954243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	910	Open in IMG/M
3300009174\|Ga0105241_11717146	Not Available	610	Open in IMG/M
3300009551\|Ga0105238_10662701	Not Available	1054	Open in IMG/M
3300009553\|Ga0105249_13281620	Not Available	520	Open in IMG/M
3300009660\|Ga0105854_1056278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1203	Open in IMG/M
3300009873\|Ga0131077_10043763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6479	Open in IMG/M
3300010399\|Ga0134127_10564259	Not Available	1161	Open in IMG/M
3300010399\|Ga0134127_11929230	Not Available	668	Open in IMG/M
3300010869\|Ga0126359_1316238	Not Available	560	Open in IMG/M
3300011269\|Ga0137392_11396923	Not Available	559	Open in IMG/M
3300011271\|Ga0137393_11337496	Not Available	605	Open in IMG/M
3300012096\|Ga0137389_10999285	Not Available	717	Open in IMG/M
3300012189\|Ga0137388_10202433	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300012359\|Ga0137385_10576547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	947	Open in IMG/M
3300012892\|Ga0157294_10109675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	720	Open in IMG/M
3300012923\|Ga0137359_11286580	Not Available	619	Open in IMG/M
3300012961\|Ga0164302_11602881	Not Available	541	Open in IMG/M
3300014318\|Ga0075351_1024357	Not Available	976	Open in IMG/M
3300014325\|Ga0163163_10965188	Not Available	916	Open in IMG/M
3300014326\|Ga0157380_10346925	Not Available	1387	Open in IMG/M
3300014326\|Ga0157380_10572948	Not Available	1112	Open in IMG/M
3300014326\|Ga0157380_12695442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	563	Open in IMG/M
3300015063\|Ga0167649_105469	Not Available	1183	Open in IMG/M
3300015063\|Ga0167649_108115	Not Available	946	Open in IMG/M
3300015078\|Ga0167660_1002740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1782	Open in IMG/M
3300015167\|Ga0167661_1056247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	735	Open in IMG/M
3300015200\|Ga0173480_10336312	Not Available	856	Open in IMG/M
3300015203\|Ga0167650_1075827	Not Available	796	Open in IMG/M
3300015257\|Ga0180067_1149530	Not Available	534	Open in IMG/M
3300017965\|Ga0190266_10763823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	614	Open in IMG/M
3300018052\|Ga0184638_1021165	Not Available	2303	Open in IMG/M
3300018429\|Ga0190272_10188880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1474	Open in IMG/M
3300018476\|Ga0190274_10871681	Not Available	965	Open in IMG/M
3300018476\|Ga0190274_11184413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	847	Open in IMG/M
3300018476\|Ga0190274_12844786	Not Available	580	Open in IMG/M
3300018481\|Ga0190271_11962014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	695	Open in IMG/M
3300019362\|Ga0173479_10236974	Not Available	794	Open in IMG/M
3300019377\|Ga0190264_10928780	Not Available	684	Open in IMG/M
3300020146\|Ga0196977_1000013	All Organisms → cellular organisms → Bacteria → Proteobacteria	195089	Open in IMG/M
3300020202\|Ga0196964_10294052	Not Available	769	Open in IMG/M
3300020215\|Ga0196963_10295802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	713	Open in IMG/M
3300021445\|Ga0182009_10642346	Not Available	571	Open in IMG/M
3300021560\|Ga0126371_11438604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	819	Open in IMG/M
3300024177\|Ga0247686_1027582	Not Available	661	Open in IMG/M
3300024181\|Ga0247693_1059277	Not Available	562	Open in IMG/M
3300025505\|Ga0207929_1075122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300025885\|Ga0207653_10148315	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300025905\|Ga0207685_10765478	Not Available	530	Open in IMG/M
3300025908\|Ga0207643_11024969	Not Available	533	Open in IMG/M
3300025909\|Ga0207705_10009865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6953	Open in IMG/M
3300025913\|Ga0207695_10081941	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	3264	Open in IMG/M
3300025913\|Ga0207695_11227293	Not Available	630	Open in IMG/M
3300025918\|Ga0207662_10296356	Not Available	1074	Open in IMG/M
3300025918\|Ga0207662_11177018	Not Available	545	Open in IMG/M
3300025922\|Ga0207646_11478792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	589	Open in IMG/M
3300025923\|Ga0207681_11099433	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300025930\|Ga0207701_10295010	Not Available	1409	Open in IMG/M
3300025931\|Ga0207644_11696388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	529	Open in IMG/M
3300025934\|Ga0207686_10199921	Not Available	1431	Open in IMG/M
3300025936\|Ga0207670_10351034	Not Available	1168	Open in IMG/M
3300025937\|Ga0207669_10675298	Not Available	847	Open in IMG/M
3300025960\|Ga0207651_11124937	Not Available	704	Open in IMG/M
3300026075\|Ga0207708_11503661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	592	Open in IMG/M
3300026088\|Ga0207641_10297701	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300026089\|Ga0207648_11220071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300026276\|Ga0209847_1087169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	583	Open in IMG/M
3300026319\|Ga0209647_1003500	All Organisms → cellular organisms → Bacteria	12117	Open in IMG/M
3300026320\|Ga0209131_1003261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	10812	Open in IMG/M
3300027587\|Ga0209220_1194102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	516	Open in IMG/M
3300027840\|Ga0209683_10595207	Not Available	503	Open in IMG/M
3300027869\|Ga0209579_10031161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2908	Open in IMG/M
3300027876\|Ga0209974_10371924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	557	Open in IMG/M
3300027886\|Ga0209486_10164837	Not Available	1231	Open in IMG/M
3300027910\|Ga0209583_10444342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	628	Open in IMG/M
3300027979\|Ga0209705_10055745	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300028379\|Ga0268266_10824596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300031170\|Ga0307498_10202440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	693	Open in IMG/M
3300031247\|Ga0265340_10280411	Not Available	740	Open in IMG/M
3300031366\|Ga0307506_10161680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	794	Open in IMG/M
3300031455\|Ga0307505_10002771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11761	Open in IMG/M
3300031548\|Ga0307408_100306073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1333	Open in IMG/M
3300031548\|Ga0307408_100504328	Not Available	1060	Open in IMG/M
3300031716\|Ga0310813_12178874	Not Available	524	Open in IMG/M
3300031720\|Ga0307469_10079776	Not Available	2212	Open in IMG/M
3300031720\|Ga0307469_10545709	Not Available	1026	Open in IMG/M
3300031731\|Ga0307405_11634724	Not Available	569	Open in IMG/M
3300031740\|Ga0307468_101302259	Not Available	662	Open in IMG/M
3300031908\|Ga0310900_10578504	Not Available	885	Open in IMG/M
3300031911\|Ga0307412_10193301	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300031911\|Ga0307412_10202667	Not Available	1508	Open in IMG/M
3300031911\|Ga0307412_10404028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1113	Open in IMG/M
3300031939\|Ga0308174_10660216	Not Available	870	Open in IMG/M
3300032002\|Ga0307416_101094898	Not Available	901	Open in IMG/M
3300032002\|Ga0307416_102977095	Not Available	567	Open in IMG/M
3300032157\|Ga0315912_11141084	Not Available	618	Open in IMG/M
3300032157\|Ga0315912_11296242	Not Available	576	Open in IMG/M
3300032421\|Ga0310812_10286116	Not Available	731	Open in IMG/M
3300032770\|Ga0335085_10047707	Not Available	5817	Open in IMG/M
3300032829\|Ga0335070_10441365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1239	Open in IMG/M
3300033004\|Ga0335084_10162711	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300033412\|Ga0310810_10826157	Not Available	831	Open in IMG/M
3300033412\|Ga0310810_11028762	Not Available	699	Open in IMG/M
3300033807\|Ga0314866_001006	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300034965\|Ga0370497_0003668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	2695	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.51%
Host-Associated	Host-Associated	27.93%
Engineered	Engineered	0.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.48%
Plants	Host-Associated → Plants	27.93%
Aquatic	Environmental → Aquatic	5.03%
Wastewater	Engineered → Wastewater	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.15%
Freshwater	Environmental → Aquatic → Freshwater	2.79%
Sediment	Environmental → Aquatic → Sediment	2.23%
Roots	Host-Associated → Plants → Roots	2.23%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.02%
Loam	Environmental → Terrestrial → Soil → Loam	15.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.23%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.68%
Sand	Environmental → Terrestrial → Soil → Sand	1.68%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.23%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.23%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.23%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.12%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.68%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.35%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.35%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.23%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.12%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.12%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.12%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.12%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.12%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.56%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.56%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.56%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.56%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.56%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.56%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.56%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015063	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015078	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026276	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_03381680	2170459010	Grass Soil	VKELSLEEVLRIAGGVPVTAALDELTYRAPQPAATDAVDASRLLPAGVRDSEPR
deeps_03199170	2199352024	Soil	VKELNLEEVLRIAGGVPVSAALDEITYRAPEETGSQTAERARFLASGVRESEPS
deeps_01420470	2199352024	Soil	VKELSLEEVLRIAGGVPSSAALDEVTYRAPEECVNDPIDYAHLLGVPFRSTESV
INPhiseqgaiiFebDRAFT_1057418872	3300000364	Soil	VKELTLEEVLRIAGGVPVTAALDEITYRAPEEPASDPVDLARLLAQDLRASEPT*
JGI1027J12803_1031383242	3300000955	Soil	VKELTLEEVLRIAGGVPVTAALDEITYRAPEEPASDPVDLARLLAQ
JGI25613J43889_100068044	3300002907	Grasslands Soil	VKELTLEEVLRIAGGVPVSAALDELTYRAPEESASESDHARLLGAGLRDSEPA*
JGI25616J43925_100751252	3300002917	Grasslands Soil	VKELTLEEVLRIAGGVPVSAALDELTYRAPEESASESEHARLLGAGLRDSEPA*
soilH1_102137546	3300003321	Sugarcane Root And Bulk Soil	MSLEEVLRIAGGVPVTAALDELTYRAPQEPERDADERARRLGTFVRGSEPL*
soilH2_101211763	3300003324	Sugarcane Root And Bulk Soil	MKELTLEEVLRIAGGVPPSAVLDEITYRTPQAGVIDPVDYAHLLELPPRSPTQNP*
Ga0062593_1022228971	3300004114	Soil	VKELSLEEVLRIAGGVPLSAALDELTYRAPEETVNDPVDYAHLLGTALRSTEPT*
Ga0062593_1023720601	3300004114	Soil	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEESVNDPIDYAHLLGVPLHSSEPT*
Ga0062590_1014833893	3300004157	Soil	REDDVKELSLEEVLRIAGGVPLSAALDELTYRAPEETVNDPVDYAHLLGTALRSTEPT*
Ga0063356_1014307152	3300004463	Arabidopsis Thaliana Rhizosphere	VKELSLEEVLRIAGGVPLSAALDELTYRAPEEAVDDPIDYAHLLGAPLRSTEPT*
Ga0063356_1028121172	3300004463	Arabidopsis Thaliana Rhizosphere	VKELSVEEVLRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLNPGLRTPEPT*
Ga0062591_1023216031	3300004643	Soil	SLEEVLRIAGGVPVTAALDEVTYRAPQEPAGEPTGNAHLLGLGLRPPEPT*
Ga0062383_104167672	3300004778	Wetland Sediment	MKELTLEEVLRIAGGVPFPATLDELTYRAPDDSPRDPVEGTRLLGGIPGPSEPE*
Ga0062594_1005024561	3300005093	Soil	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFRATESA*
Ga0062594_1012919992	3300005093	Soil	VKELSLEEVLRIAGGLPLSAALDELTYRAPTESSNDPIDYAHLAGASRHPSQTA*
Ga0066673_104374812	3300005175	Soil	VKELSLEEVLRIAGGVPLSAALDEVTYRSPEENVNDPVDYAHLLGAPFRTTESA*
Ga0066679_110133881	3300005176	Soil	VKELNLDEVLRIAGGVPVSAALDELTYRAPAESASDPLDATRLLGTALRDFEPT*
Ga0066671_105531523	3300005184	Soil	EDDVKKLNLDEVLRIAGGVPVSAALDELTYRAPAESASDPLDATRLLGTALRDFEPT*
Ga0070658_100048715	3300005327	Corn Rhizosphere	VKELSLEEVLRIAGGLPLSAALDELTYRAPTESSSDPIDYAHLVGASRHPSQTA*
Ga0068869_1008274461	3300005334	Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEITYRAPEEALNDPVDYAHLLGTALRPTEST*
Ga0070682_1008141632	3300005337	Corn Rhizosphere	VKELSLEEVLRIAGGVPVTAALDEVTYRASQDPAGEPLDYARLLNLGLRPPEPT*
Ga0068868_1003135232	3300005338	Miscanthus Rhizosphere	VKELSFEEALRIPGGRPFAAALDELTYRSPLQSVADPIDYAHTLGALRHPSDMA*
Ga0070689_1004195074	3300005340	Switchgrass Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFHATESA*
Ga0070687_1012151273	3300005343	Switchgrass Rhizosphere	VLRIAGGVPVSAALDELTYRAPADPAGEPVDFAHLLGPNPSAPEPT*
Ga0070671_1001755203	3300005355	Switchgrass Rhizosphere	VKELSFEEVLRIPGGRPFAAALDELTYRSPLQSVADPIDYAHTLGALRHPSDMA*
Ga0070674_1005538912	3300005356	Miscanthus Rhizosphere	VKELSFEEVLRIAGGVPVSAALDELTYRTPQESAGEPVDYARLLNASLRPSEPT*
Ga0070688_1010284123	3300005365	Switchgrass Rhizosphere	GSQAPASREDDVKELSLEEVLRIAGGVPLSAALDELTYRAPEETVNDPVDYAHLLGTALRSTEPT*
Ga0070709_103275112	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VKEMSLEEVLRIAGGVPVTAALDELTYRAPQPPVSGAEDRAKLLGTVLRESEPL*
Ga0070709_103915552	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSLEEVLRIAGGVPVTAALDELTYRAPQEPERDAEERARRLGTFLRESEPL*
Ga0070701_102569631	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFRTTESA*
Ga0070705_1001897003	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VKELNLEEVLRIAGGVPVSAALDELTYRAPEESAGEPVDLARLLGSGPRESESV*
Ga0070700_1011734301	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDELTYRAPEESGSDPIDYVHLLGAGLRPTEPT*
Ga0070694_1011780011	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDELTYRAPEESGCDPIDYVHLLGAGLRPTEPT*
Ga0070708_1021710411	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	APASWEDEVKELNLEEVLRIAGGVPVSAALDELTYRAPEESAGEPVDLARLLGSGPRESESV*
Ga0070707_1018602291	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RAPASWEDEVKELNLEEVLRIAGGVPVSAALDELTYRAPEESAGEPVDLARLLGSGPRESESV*
Ga0070698_1009650972	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VKELDFEEVLRIAGGVPVSAALDELTYRVPEESAADPVDYARLLGAGLRESEPA*
Ga0070699_1010607292	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSIEEVMRIAGGVPVAAALDELTYRAPQESAGEPVDFAHLLNPGLRAPEPT*
Ga0070731_100030413	3300005538	Surface Soil	VKELSLEEVLRIAGGVPVTAALDELTYRAPQPAASEAVDASRMLPPGVRDAEPR*
Ga0068853_1008095364	3300005539	Corn Rhizosphere	RIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFRATESA*
Ga0070695_1009882532	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEESVNDPIDYAHLLGVPLRSTEPT*
Ga0070693_1000529611	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	AGSKAPASQEVVVKELSLEEVLRIAGGVPVTAALDEVTYRASQDPAGEPLDYARLLNLGLRPPEPT*
Ga0070693_1004548462	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSLEEVLRIAGGVPVTAALDELTYRAPQEPGRDADERARRLGTLLRESEPL*
Ga0070665_1009966201	3300005548	Switchgrass Rhizosphere	VKELSVEEVLRIAGGVPVSAALDEITYRAPQDSAGEPIDYARLLNVNLRPS
Ga0068854_1008147491	3300005578	Corn Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFCATESA*
Ga0068866_105106252	3300005718	Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEESVNDPIDYAHLLGVPLHSSEPK*
Ga0066903_1005580093	3300005764	Tropical Forest Soil	MSLEEVLRIAGGVPVTAALDELTYRAPQEPVDEAEDRAALLGTVLREFKPL*
Ga0066903_1038154761	3300005764	Tropical Forest Soil	VKELTLEEVLKIAGGVPVAAALDEVTYRAPEEAVNEPVDYARLLGVPLRSTDPT*
Ga0075275_10513241	3300005892	Rice Paddy Soil	VKELTLEEVLRIAGGVPAAAALDEVTYRAPAERRADPADYARLAGADLRPSETG*
Ga0080027_101293863	3300005993	Prmafrost Soil	VKELSLEEVLRIAGGVPVSAALDEITYRAPEEAGSEPIDYARFLGSTLRPPEPS*
Ga0066789_101521631	3300005994	Soil	LEEVLRIAGGVPVSAALDEITYRAPEEAGSEPIDYARFLGSSLRPPEPS*
Ga0075024_1000065785	3300006047	Watersheds	VEDDVKELNLEEVLRIAGGVPVSAALDEITYRAPQEQGNEPIDYARFLGSSLRPPEPS*
Ga0097621_1005472982	3300006237	Miscanthus Rhizosphere	VKELSLEEVLRIAGGLPLSAALDELTYRAPTESSNDPIDYAHLVGASRHPSQTA*
Ga0068871_1001969823	3300006358	Miscanthus Rhizosphere	MKELSLEEVLRIAGGVPLSAALDELTYRAPEEAMNDPVDYAHLLGTALRSTEST*
Ga0068871_1009254353	3300006358	Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDAVDYAHLLGAPFRATESA*
Ga0079222_109699253	3300006755	Agricultural Soil	LEEVLRIAGGVPVTAALDELTYRAPQEPQRDAEERARRLGTFLRESEPL*
Ga0079222_109961152	3300006755	Agricultural Soil	VKELDLVEVMRIAGGVPVSAALDELTYRTPERSAGDTVDYARLLGLLPRESEPV*
Ga0079220_106486562	3300006806	Agricultural Soil	MSLEEVLRIAGGVPVTAALDELTYRAPQEPQRDAEERARRLGTFLRESEPL*
Ga0075425_1018411482	3300006854	Populus Rhizosphere	VKELSLEEVLRIAGGLPIQSALDEITYRAPAESSSDPVDYAHLLGVSRHPSEPA*
Ga0075434_1010728683	3300006871	Populus Rhizosphere	VKELSLEEVLRIAGGLPIQSALDEITYRAPAESSSDPVDYAHLLGASRHPSEPA*
Ga0079217_103209313	3300006876	Agricultural Soil	VKELSLEEVLRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLAPAPRAPDPT*
Ga0079215_101375612	3300006894	Agricultural Soil	VKELSVEEVLRIAGGLPMTAALDEVTYRASSESVEDPVDYAHLLGLDLRATEP*
Ga0079215_107035622	3300006894	Agricultural Soil	VKELSLEEVLRIAGGVPVSAALDEITYRAPQESAGEPVDFAHLLAPVPRAPDPT*
Ga0079219_121972221	3300006954	Agricultural Soil	GPVPAALPTEAGGTMKELTLEEVLRIAGGVPLSAALDEVTYRAPEEGVNDPIDFAHLLGAPSRSAEST*
Ga0079218_136894041	3300007004	Agricultural Soil	VKELSLEEVLRIAGGVPVSAALDELTYRAPEESVNDPIDYAHLLGAALRATDPS*
Ga0105106_101069713	3300009078	Freshwater Sediment	MKELTLEELLRIAGGVPLPAALDELTYRAPQEEGRDRLDREHLLGNGSRPSEPL*
Ga0105107_111361972	3300009087	Freshwater Sediment	MKELTLEELLRIAGGVPLPAALDELTYRAPQEEGRDRLDREQLLGNGSRPSEPL*
Ga0099828_101659053	3300009089	Vadose Zone Soil	VKELNLDEVLRIAGGVPVSAALDELTYRAPAESAADPLDATRLL
Ga0105240_104805133	3300009093	Corn Rhizosphere	VPAGSKAPASQEVVVKELSLEEVLRIAGGVPVTAALDEVTYRASQDPAGEPLDYARLLNLGLRPPEPT*
Ga0111539_109367314	3300009094	Populus Rhizosphere	VKELSIEEVMRIAGGVPVAAALDELTYRAPQESAGEPVDFAHLLNPGPRAPEPT*
Ga0105245_105775381	3300009098	Miscanthus Rhizosphere	ATKEVDVKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFRATESA
Ga0105245_112842762	3300009098	Miscanthus Rhizosphere	VKELSLEEVLRIAGGLPLSAALDELTYRAPTESSNDPIDYAHLVGASRHPSQSA*
Ga0066709_1008094203	3300009137	Grasslands Soil	VKELNFDEVLRIAGGVPVSAALYELTYRAPAESASDPLDATRLLGTALRDFEPS*
Ga0075423_109542432	3300009162	Populus Rhizosphere	VKELSIEEVMRIAGGVPVAAALDELTYRAPQESAGEPVDFAHLLSPGPRAPEPT*
Ga0105241_117171461	3300009174	Corn Rhizosphere	VKEMSLEEVLRIAGGVPVTAALDELTYRAPQEPGRDADERARRLGTLLRESEPL*
Ga0105238_106627014	3300009551	Corn Rhizosphere	DDVKELSFEEVLRIPGGRPFAAALDELTYRSPLQSVADPIDYAHTLGALRHPSDMA*
Ga0105249_132816202	3300009553	Switchgrass Rhizosphere	LPDRRVLATKEVDVKELSLEEVLRIAGGVPLSAALDEVTYRAPEESVNDPIDYAHLLGVPLHSSEPT*
Ga0105854_10562783	3300009660	Permafrost Soil	VEDDVKELNLEEVLRIAGGVPVSAALDEITYRAPEEAGSEPIDYARFLGSSLRPPEPS*
Ga0131077_100437632	3300009873	Wastewater	VKELSLEEVMRIAGGVPLPAALDEVTYGAPQEAAGEPVDFAHLLGPGPRAPEPT*
Ga0134127_105642593	3300010399	Terrestrial Soil	VKELSLEEVLRIAGGVPLSAALDELTYRAPEEAGSDPIDYVHLLGAGLRPTEPT*
Ga0134127_119292303	3300010399	Terrestrial Soil	ATKEVDVKELSLEEVLRIAGGVPLSAALDEVTYRAPEESVNDPIDYAHLLGVPLHSSEPT
Ga0126359_13162382	3300010869	Boreal Forest Soil	VKELSLEEVLRIAGGVPVTAALDELTYRAPQPAATEGVDSAQLLAPGIRDSEPH*
Ga0137392_113969231	3300011269	Vadose Zone Soil	VKELNLDEVLRIAGGVPVSAALDELTYRAPAESAADPLDATRLLGTALRDFEPS*
Ga0137393_113374961	3300011271	Vadose Zone Soil	VKELTLEEVLRIAGGVPLSAALDELTYRAPEEAAGDPADSARLLGVNLRESEPI*
Ga0137389_109992851	3300012096	Vadose Zone Soil	EDDVKELNLDEVLRIAGGVPVSAALDELTYRAPAESAADPLDATRLLGTALRDFEPS*
Ga0137388_102024333	3300012189	Vadose Zone Soil	VKELNLDEVLRIAGGVPVSAALDELTYRAPAESAADPLDATRLLGTALRDFEPT*
Ga0137385_105765473	3300012359	Vadose Zone Soil	VEDPVKELNLEEVLRIAGGVPVSAALDELTYRAPQETGSEPIDRARILGTGVRESGPS*
Ga0157294_101096752	3300012892	Soil	MPLIEEGVMKELSLEEVLRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLAAGPRAPEPT*
Ga0137359_112865802	3300012923	Vadose Zone Soil	VKELNLDEVLRIAGGVPVSAALDEVTYRAPAESATDPLDATQLLGTALRDFEPI*
Ga0164302_116028812	3300012961	Soil	MRSACRVESTCIQEVVVKELSLEEVLRSAGGVVVTAALDEVTYRAPQDPAGEPLDYARLLNLGLRPPEPT*
Ga0075351_10243572	3300014318	Natural And Restored Wetlands	VKELSLEEVLRIAGGVPVSAALDELTYRAPQEAAGEPIDYARLLNASLHPSEPT*
Ga0163163_109651882	3300014325	Switchgrass Rhizosphere	VKELSLEEVLRIAGGVPLSAALDELTYRAPEETVNDPVDYAHLLGTALRSTEST*
Ga0157380_103469253	3300014326	Switchgrass Rhizosphere	MPLIEEGVMKELSLEEVLRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLAAAPRAPEPT*
Ga0157380_105729482	3300014326	Switchgrass Rhizosphere	VKELTLEEVLRIAGGVPVSAALDELTYRTPQESARNPVDYARLSGKDLPSPEPT*
Ga0157380_126954421	3300014326	Switchgrass Rhizosphere	VKELSIEEVMRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLNPGPRAPEPT*
Ga0167649_1054693	3300015063	Glacier Forefield Soil	MPAGSKSTCSQEDAVKELSVEEVLRIAGGVPVTAALDELTYRAPQESAGEPIDYARLLNASLRPSEPT*
Ga0167649_1081153	3300015063	Glacier Forefield Soil	MQVKELSVEEVLRIAGGVPVSAALDELTYRAPQEAAGGPIDYARLLGATLRPSEPT*
Ga0167660_10027406	3300015078	Glacier Forefield Soil	MPAGSKSTCSQEDAVKELSVEEVLRIAGGVPVSAALDELTYRAPQESAGEPIDYARLLNASLRPSEPT*
Ga0167661_10562472	3300015167	Glacier Forefield Soil	VKELSVEEVLRIAGGVPVSAALDELTYRAPQESAGEPIDYARLLNASLRPSEPT*
Ga0173480_103363122	3300015200	Soil	VKELSLEEVLRIAGGVPLSAALDELTYRAPEESVNDPVDYAHLLGTALRSTEPT*
Ga0167650_10758273	3300015203	Glacier Forefield Soil	VKELNLEEVLRIAGGVPVSAALDELTYRAPEESLSDPVDYARLLGPVLRESEPS*
Ga0180067_11495303	3300015257	Soil	EVLRIAGGVPVSGVLDELSYRVPQGSAGEPVDFAHLLDSVPRAPEPK*
Ga0190266_107638232	3300017965	Soil	VKELSIEEVMRIAGGVPVAAALDELTYRAPQESAGEPVDFAHLLNPGLRTPEPT
Ga0184638_10211653	3300018052	Groundwater Sediment	VKELTLEEVLRIAGGVPVSAALDELTYRAPEELALEPGDHARLLGAGLRDSEPA
Ga0190272_101888803	3300018429	Soil	VKELSLEEVLRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLAPVPRAPDPT
Ga0190274_108716812	3300018476	Soil	VKELTLEEVLRIAGGVPVSAALDELTYRTPQESARNPVDYARLSGKDLHAPEPT
Ga0190274_111844132	3300018476	Soil	MKELSLEEVLRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLAAGPRAPEPT
Ga0190274_128447861	3300018476	Soil	VKELSLEEVLRIAGGVPVSGVLDELSYRAPQESAGEPVDFAHLLDSVPRAPEPK
Ga0190271_119620141	3300018481	Soil	MKELSLEEVLRIAGGVPLSAALDEVTYRAPQESACDPIDRARLLGKDPPPSETV
Ga0173479_102369743	3300019362	Soil	VKELSLEEVLRIAGGVPLSAALDELTYRAPEETVNDPVDYAHLLGTALRSTEPT
Ga0190264_109287803	3300019377	Soil	VKELSLEEVMRIAGGVPVAAALDEVTYGAPQESAGEPVDFAHLLNPGLRSPEPT
Ga0196977_1000013139	3300020146	Soil	MVKELSLEEVLRIAGGLPLSAALDEITYHAQLESACGPVDRARLLGKDPPSSEPV
Ga0196964_102940521	3300020202	Soil	LQIAGGVPLSAALDELTYRAPKEAASDPIDRARLLGKDPSPSEPV
Ga0196963_102958023	3300020215	Soil	MKELTIEEVLRIAGGLPVPAALDELTYRTAEESAGDPVDYAHLLGPGLRPSEPT
Ga0182009_106423462	3300021445	Soil	VKELSLEEVLRIAGGLPLSAALDELTYRAPTESSNDPIDYAHLVGASRHPSQSA
Ga0126371_114386041	3300021560	Tropical Forest Soil	MSLEEVLRIAGGVPVTAALDELTYRAPQQPGDEAGERAKRLGTFLRESEPL
Ga0247686_10275821	3300024177	Soil	ELSFEEVLRIPGGQPVAAALDELTYRSPAQSAADPIDYAHSLGALRHPSDTA
Ga0247693_10592771	3300024181	Soil	EEDGVKELSFEEVLRIPGGQPVAAALDELTYRSPAQSAADPIDYAHSLGALRHPSDIA
Ga0207929_10751222	3300025505	Arctic Peat Soil	VKELNLEEVLRIAGGVPVSAALDEITYRAPEESGSEPAERTRLLGSVLRESEPS
Ga0207653_101483153	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEESVNDPIDYAHLLGVPLHSSEPT
Ga0207685_107654783	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	SKVPATKEVDVKELSLEEVLRIAGGVPSSAALDEVTYRAPEEAMNDPVDYAHLLGTALRSTEST
Ga0207643_110249691	3300025908	Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEESVNDPIDYAHLL
Ga0207705_100098655	3300025909	Corn Rhizosphere	VKELSLEEVLRIAGGLPLSAALDELTYRAPTESSSDPIDYAHLVGASRHPSQTA
Ga0207695_100819412	3300025913	Corn Rhizosphere	VKELSFEDVLRIPGGRPFAAALDELTYRSPLQSVADPIDYAHTLGALRHPSDMA
Ga0207695_112272931	3300025913	Corn Rhizosphere	ECEVPAGSKAPASQEVVVKELSLEEVLRIAGGVPVTAALDEVTYRASQDPAGEPLDYARLLNLGLRPPEPT
Ga0207662_102963562	3300025918	Switchgrass Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFRATESA
Ga0207662_111770183	3300025918	Switchgrass Rhizosphere	VLRIAGGVPVSAALDELTYRAPADPAGEPVDFAHLLGPNPSAPEPT
Ga0207646_114787921	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RAPASWEDEVKELNLEEVLRIAGGVPVSAALDELTYRAPEESAGEPVDLARLLGSGPRESESV
Ga0207681_110994331	3300025923	Switchgrass Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEITYRAPEEALNDPVDYAHLLGTALRPTE
Ga0207701_102950102	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEITYRAPEEALNDPVDYAHLLGTALRPTEST
Ga0207644_116963881	3300025931	Switchgrass Rhizosphere	VKELNLEEVLRIAGGVPVSAALDEITYRSPQEQPSDPVDYAHLLGLVPHGADPA
Ga0207686_101999213	3300025934	Miscanthus Rhizosphere	MKELSLEEVLRIAGGVPLSAALDELTYRAPEEAMNDPVDYAHLLGTALRSTEST
Ga0207670_103510341	3300025936	Switchgrass Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFHATESA
Ga0207669_106752982	3300025937	Miscanthus Rhizosphere	MRSACRVESTCIQEVVVKELSLEEVLRIAGGVPVTATLDEVTYRAPQEPAGEPTGNAHLLGLGLRPPEPT
Ga0207651_111249373	3300025960	Switchgrass Rhizosphere	LATKEVDVKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFRATES
Ga0207708_115036612	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VKELSLEEVLRIAGGVPLSAALDELTYRAPEESGSDPIDYAHLLGAGLRPTEPT
Ga0207641_102977013	3300026088	Switchgrass Rhizosphere	VKELNLEEVLRIAGGVPVSAALDEITYRSPQEQPSDPVDYAHLLG
Ga0207648_112200711	3300026089	Miscanthus Rhizosphere	EEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFRATESA
Ga0209847_10871691	3300026276	Permafrost Soil	VEDDVKELNLEEVLRIAGGVPVSAALDEITYRAPEEAGSEPIDYARFLGSSLRPPEPS
Ga0209647_100350013	3300026319	Grasslands Soil	VKELNLEEVLRIAGGVPVTATLDEVTYRAPEEPVSDPVDYARLLGPGLRGSEPV
Ga0209131_10032618	3300026320	Grasslands Soil	VKELTLEEVLRIAGGVPVSAALDELTYRAPEESASESDHARLLGAGLRDSEPA
Ga0209220_11941022	3300027587	Forest Soil	VKELSLEEVLRIAGGVPVSAALDELTYRAPEESASDPVDYALLLGVGLRDSEPV
Ga0209683_105952072	3300027840	Wetland Sediment	MKELTLEEVLRIAGGVPFPATLDELTYRAPDDSPRDPVEGTRLLGGIPGPSEPE
Ga0209579_100311613	3300027869	Surface Soil	VKELSLEEVLRIAGGVPVTAALDELTYRAPQPAASEAVDASRMLPPGVRDAEPR
Ga0209974_103719242	3300027876	Arabidopsis Thaliana Rhizosphere	VKELSLEEVLRIAGGVPLSAALDELTYRAPEESGSDPIDYVHLLGAGLRPTEPT
Ga0209486_101648373	3300027886	Agricultural Soil	VKELSLEEVLRIAGGVPVSAALDELTYRAPQESAGEPVDFAHLLAPAPRAPDPT
Ga0209583_104443421	3300027910	Watersheds	VKELNLEEVLRIAGGVPVSAALDELTYRAPEETVGDAVDAARLLRAVVRESEPL
Ga0209705_100557453	3300027979	Freshwater Sediment	MKELTLEELLRIAGGVPLPAALDELTYRAPQEEGRDRLDREHLLGNGSRPSEPL
Ga0268266_108245963	3300028379	Switchgrass Rhizosphere	VKELSVEEVLRIAGGVPVSAALDEITYRAPQDSAGEPIDYARSLNVNLRPSEPT
Ga0307498_102024402	3300031170	Soil	VKELSLEEVLRIAGGVPVSAALDELTYRAPQEAAGEPIDYARLLNASLHPSEPT
Ga0265340_102804112	3300031247	Rhizosphere	VKELSLEEVLRIAGGVPVTAALDELTYRAPQPAVAEGVDSAQMLPPGIRDSEPH
Ga0307506_101616803	3300031366	Soil	VKELSFEEVLRIAGGVPVSAALDELTYRTPQESAGEPVDYARLLNASLRPSEPT
Ga0307505_100027713	3300031455	Soil	VKELSLEEVLRIAGGVPVSAALDEITYRAPQESAGEPVDFAHLLAPVPRAPDPT
Ga0307408_1003060731	3300031548	Rhizosphere	VKELSLEEVLRIAGGVPHSAALDEVTYRAPAESVNDPIDYAHLLGAPFRSTESA
Ga0307408_1005043282	3300031548	Rhizosphere	MEEVLRIAGGVPVTAALDEVTYRAPREPAGEPLDYARLLNASLHPSEPT
Ga0310813_121788741	3300031716	Soil	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEEGVNDPIDFAHLLGAPS
Ga0307469_100797763	3300031720	Hardwood Forest Soil	VKELNLEEVLRIAGGVPVSAALDELTYRAPEESAGEPVDLARLLGSGPRESESV
Ga0307469_105457092	3300031720	Hardwood Forest Soil	VKELNLDEVLRIAGGVPVSAALDEVTYRAPAESATHPLDATQLLGTALRDFEPI
Ga0307405_116347242	3300031731	Rhizosphere	MEEVLRIAGGVPVTAALDEVTYRAPHEPAGEPLDYAQRLNASLRPSEPT
Ga0307468_1013022593	3300031740	Hardwood Forest Soil	MKELSLEEVLRIAGGVPLASTLDELTYRAPEESRDPLEAARRTGTDLRPAEAD
Ga0310900_105785042	3300031908	Soil	VPLIEEGVVKELSIEEVLRIAGGVPVSGVLDELSYRAPQESAGEPVDYAHLLDAVPRVPEPK
Ga0307412_101933012	3300031911	Rhizosphere	VKELSVEEVMRIAGGVPVAAALDEVTYGAPQESAGEPVDFAHLLNPGLRAPEPT
Ga0307412_102026673	3300031911	Rhizosphere	VKELSLEEVLRIAGGVPVSAVLDELSYRAPQPPAGEPVDFAHLLDCVSRAPDPK
Ga0307412_104040281	3300031911	Rhizosphere	MKELSIEEVLRIAGGLPIAAALDELTYRTPEASGREPVDYAHLLGPNLAASEPA
Ga0308174_106602162	3300031939	Soil	VKELTLEEVLKIAGGVPFSAALDEVTYRAPEESVNDSVDYAHLLGVPFRPTEST
Ga0307416_1010948984	3300032002	Rhizosphere	VKELSLEEVLRIAGGVPLSAALDEITYRAPQESACDPQDRARLLGKDRPPFETV
Ga0307416_1029770951	3300032002	Rhizosphere	VKELSLEEVLRIAGGVPHSAALDEVTYRAPAESVNDPIDYAHLLGA
Ga0315912_111410842	3300032157	Soil	MEEGIVKELSLEEVLRIAGGVPVSGVLDELSYRAPQESAGEPVDYAHLLDAVPRAPEPK
Ga0315912_112962421	3300032157	Soil	MEEGVVKELSLEEILRIAGGVPVSAVLDELSYRAPQPPAGEPVDFAHLHDCVSRAPDPK
Ga0310812_102861162	3300032421	Soil	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGAPFHGTESA
Ga0335085_100477076	3300032770	Soil	VKELSLEEVLRIAGGVPVTAALDELTYRAQQPAASEAVDPAQLFPAGVRDSEPR
Ga0335070_104413653	3300032829	Soil	VKELSLEEVLRIAGGVPVTAALDELTYRAPQPAVTEAVDASQLLPEGIRDPEPR
Ga0335084_101627113	3300033004	Soil	VKELSVEEVLRIAGGVPVSAALDELTYRAPQEAAGEPIDYAHLINASLRPSEPT
Ga0310810_108261571	3300033412	Soil	MKELTLEEVLRIAGGVPPSAVLDEITYRTPQGRAADPVDYAHLLERPPRSTTEDP
Ga0310810_110287622	3300033412	Soil	VKELSLEEVLRIAGGVPLSAALDEVTYRAPEENVNDPVDYAHLLGA
Ga0314866_001006_1169_1345	3300033807	Peatland	MEEVVKELSLEEVLRVAGGVPVTAALDELTYRAPQEAGTDPADPARLLRAPARDSEPL
Ga0370497_0003668_1288_1467	3300034965	Untreated Peat Soil	MKEDVVKELSLEEVLRIAGGLPLTSALDEITYRAPEQAAPDPVDSARLLVTGLRAPEPT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032690

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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