Metagenome / Metatranscriptome Family F032764

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F032764
Family Type	Metagenome / Metatranscriptome
Number of Sequences	179
Average Sequence Length	42 residues
Representative Sequence	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Number of Associated Samples	126
Number of Associated Scaffolds	179

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.28 %
% of genes near scaffold ends (potentially truncated)	44.69 %
% of genes from short scaffolds (< 2000 bps)	84.36 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (63.687 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.726 % of family members)
Environment Ontology (ENVO)	Unclassified (35.754 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.190 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 80.95% β-sheet: 0.00% Coil/Unstructured: 19.05%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 179 Family Scaffolds
PF00132	Hexapep	35.75
PF06035	Peptidase_C93	11.73
PF11324	DUF3126	2.79
PF06426	SATase_N	2.23
PF13356	Arm-DNA-bind_3	1.68
PF01694	Rhomboid	1.68
PF14602	Hexapep_2	1.12
PF03401	TctC	0.56
PF12307	DUF3631	0.56
PF02371	Transposase_20	0.56
PF13560	HTH_31	0.56
PF00571	CBS	0.56
PF10028	DUF2270	0.56

COG ID	Name	Functional Category	% Frequency in 179 Family Scaffolds
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	11.73
COG1045	Serine acetyltransferase	Amino acid transport and metabolism [E]	2.23
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.56
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.69 %
Unclassified	root	N/A	36.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.69 %
Unclassified	root	N/A	36.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.69 %
Unclassified	root	N/A	36.31 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.69 %
Unclassified	root	N/A	36.31 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.01 %
Unclassified	root	N/A	36.31 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	37.43 %
Unclassified	root	N/A	36.31 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.59 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.12 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	1.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.59 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.12 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	1.12 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.59 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1.12 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.56 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.59 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1.12 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.56 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.56 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig36799	Not Available	541	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig1244514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig541499	Not Available	699	Open in IMG/M
3300000559\|F14TC_101953656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1428	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10031231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1437	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10142492	Not Available	579	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1006715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2201	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1025139	Not Available	1113	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1049119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10004714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3152	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10033980	Not Available	1187	Open in IMG/M
3300000955\|JGI1027J12803_101646063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1118	Open in IMG/M
3300001867\|JGI12627J18819_10138464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	995	Open in IMG/M
3300002906\|JGI25614J43888_10011563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2850	Open in IMG/M
3300002914\|JGI25617J43924_10289471	Not Available	562	Open in IMG/M
3300004267\|Ga0066396_10027498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	809	Open in IMG/M
3300004479\|Ga0062595_100715756	Not Available	807	Open in IMG/M
3300004629\|Ga0008092_11321994	Not Available	599	Open in IMG/M
3300004633\|Ga0066395_10723022	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
3300005166\|Ga0066674_10232776	Not Available	876	Open in IMG/M
3300005332\|Ga0066388_100515801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1829	Open in IMG/M
3300005332\|Ga0066388_102041323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300005332\|Ga0066388_102536139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300005332\|Ga0066388_104140873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300005332\|Ga0066388_105326487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	652	Open in IMG/M
3300005332\|Ga0066388_105524269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300005332\|Ga0066388_106222013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	602	Open in IMG/M
3300005332\|Ga0066388_106243773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300005332\|Ga0066388_106856072	Not Available	573	Open in IMG/M
3300005434\|Ga0070709_10058185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2451	Open in IMG/M
3300005467\|Ga0070706_101787789	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300005553\|Ga0066695_10300622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1012	Open in IMG/M
3300005554\|Ga0066661_10127419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1544	Open in IMG/M
3300005558\|Ga0066698_10553897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	780	Open in IMG/M
3300005713\|Ga0066905_100181853	Not Available	1552	Open in IMG/M
3300005713\|Ga0066905_100869846	Not Available	786	Open in IMG/M
3300005713\|Ga0066905_101071456	Not Available	714	Open in IMG/M
3300005713\|Ga0066905_101563779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300005713\|Ga0066905_102180324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300005713\|Ga0066905_102207491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300005764\|Ga0066903_104160203	Not Available	775	Open in IMG/M
3300005764\|Ga0066903_106358312	Not Available	616	Open in IMG/M
3300005937\|Ga0081455_10003815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17198	Open in IMG/M
3300005937\|Ga0081455_10463070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	863	Open in IMG/M
3300006173\|Ga0070716_100967723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	671	Open in IMG/M
3300006800\|Ga0066660_10195156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1539	Open in IMG/M
3300006854\|Ga0075425_101914686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	664	Open in IMG/M
3300009090\|Ga0099827_10130746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2033	Open in IMG/M
3300009094\|Ga0111539_13156402	Not Available	531	Open in IMG/M
3300009100\|Ga0075418_10133517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2639	Open in IMG/M
3300009137\|Ga0066709_100475932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1753	Open in IMG/M
3300009137\|Ga0066709_101891314	Not Available	831	Open in IMG/M
3300009147\|Ga0114129_10064374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5116	Open in IMG/M
3300009147\|Ga0114129_10635570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300009792\|Ga0126374_10458600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300009792\|Ga0126374_11230471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300010041\|Ga0126312_11253620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300010043\|Ga0126380_11252312	Not Available	643	Open in IMG/M
3300010046\|Ga0126384_10066649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2543	Open in IMG/M
3300010046\|Ga0126384_10431726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1120	Open in IMG/M
3300010046\|Ga0126384_11283055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300010047\|Ga0126382_12185971	Not Available	532	Open in IMG/M
3300010366\|Ga0126379_12121620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300010366\|Ga0126379_12148485	Not Available	660	Open in IMG/M
3300010376\|Ga0126381_101296647	Not Available	1053	Open in IMG/M
3300010376\|Ga0126381_104860557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300010398\|Ga0126383_12511756	Not Available	599	Open in IMG/M
3300010863\|Ga0124850_1011565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2807	Open in IMG/M
3300012200\|Ga0137382_10015166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4264	Open in IMG/M
3300012202\|Ga0137363_10080099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2430	Open in IMG/M
3300012205\|Ga0137362_11708668	Not Available	516	Open in IMG/M
3300012207\|Ga0137381_11402804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300012210\|Ga0137378_11747998	Not Available	527	Open in IMG/M
3300012285\|Ga0137370_10269860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1011	Open in IMG/M
3300012353\|Ga0137367_10037042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3737	Open in IMG/M
3300012355\|Ga0137369_10571296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300012356\|Ga0137371_11045260	Not Available	617	Open in IMG/M
3300012361\|Ga0137360_10292476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1350	Open in IMG/M
3300012362\|Ga0137361_10772183	Not Available	875	Open in IMG/M
3300012948\|Ga0126375_10202877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1304	Open in IMG/M
3300012958\|Ga0164299_10461850	Not Available	834	Open in IMG/M
3300012960\|Ga0164301_10505055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	873	Open in IMG/M
3300012961\|Ga0164302_10018215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2976	Open in IMG/M
3300012971\|Ga0126369_10278489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1662	Open in IMG/M
3300012971\|Ga0126369_10693000	Not Available	1095	Open in IMG/M
3300016270\|Ga0182036_10897182	Not Available	726	Open in IMG/M
3300016341\|Ga0182035_10942236	Not Available	763	Open in IMG/M
3300016357\|Ga0182032_11399813	Not Available	605	Open in IMG/M
3300016371\|Ga0182034_10540099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	977	Open in IMG/M
3300016371\|Ga0182034_10978593	Not Available	730	Open in IMG/M
3300016371\|Ga0182034_11063993	Not Available	700	Open in IMG/M
3300016422\|Ga0182039_10696377	Not Available	895	Open in IMG/M
3300018431\|Ga0066655_10342834	Not Available	979	Open in IMG/M
3300018431\|Ga0066655_11388656	Not Available	509	Open in IMG/M
3300018433\|Ga0066667_10097679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1945	Open in IMG/M
3300018433\|Ga0066667_10301438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300018433\|Ga0066667_11498207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300018433\|Ga0066667_11631947	Not Available	576	Open in IMG/M
3300018468\|Ga0066662_12283445	Not Available	568	Open in IMG/M
3300018482\|Ga0066669_10546174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300020580\|Ga0210403_10760981	Not Available	772	Open in IMG/M
3300021372\|Ga0213877_10123097	Not Available	804	Open in IMG/M
3300021479\|Ga0210410_11581915	Not Available	549	Open in IMG/M
3300021560\|Ga0126371_10460009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1419	Open in IMG/M
3300021560\|Ga0126371_10651683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1202	Open in IMG/M
3300021560\|Ga0126371_11008890	Not Available	974	Open in IMG/M
3300021560\|Ga0126371_11240788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	881	Open in IMG/M
3300025885\|Ga0207653_10005704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3884	Open in IMG/M
3300025922\|Ga0207646_11215630	Not Available	660	Open in IMG/M
3300026304\|Ga0209240_1066802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1341	Open in IMG/M
3300026313\|Ga0209761_1174279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	986	Open in IMG/M
3300026319\|Ga0209647_1015240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4963	Open in IMG/M
3300026319\|Ga0209647_1092123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300026326\|Ga0209801_1351722	Not Available	519	Open in IMG/M
3300026482\|Ga0257172_1090975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300027874\|Ga0209465_10360578	Not Available	728	Open in IMG/M
3300027882\|Ga0209590_10246635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1139	Open in IMG/M
3300027903\|Ga0209488_10570573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300027909\|Ga0209382_10653428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1137	Open in IMG/M
3300028784\|Ga0307282_10484905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031544\|Ga0318534_10453966	Not Available	734	Open in IMG/M
3300031545\|Ga0318541_10103375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1531	Open in IMG/M
3300031545\|Ga0318541_10404923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300031546\|Ga0318538_10176644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1135	Open in IMG/M
3300031573\|Ga0310915_10249208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1249	Open in IMG/M
3300031640\|Ga0318555_10142672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1280	Open in IMG/M
3300031640\|Ga0318555_10207934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1055	Open in IMG/M
3300031668\|Ga0318542_10045937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1963	Open in IMG/M
3300031668\|Ga0318542_10112407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300031668\|Ga0318542_10334636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300031668\|Ga0318542_10554701	Not Available	598	Open in IMG/M
3300031679\|Ga0318561_10052768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2039	Open in IMG/M
3300031681\|Ga0318572_10953292	Not Available	509	Open in IMG/M
3300031682\|Ga0318560_10141434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1269	Open in IMG/M
3300031682\|Ga0318560_10402679	Not Available	740	Open in IMG/M
3300031682\|Ga0318560_10734157	Not Available	533	Open in IMG/M
3300031719\|Ga0306917_10005103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7009	Open in IMG/M
3300031723\|Ga0318493_10030401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2451	Open in IMG/M
3300031723\|Ga0318493_10075492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1651	Open in IMG/M
3300031747\|Ga0318502_10188603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1189	Open in IMG/M
3300031763\|Ga0318537_10379253	Not Available	521	Open in IMG/M
3300031765\|Ga0318554_10108829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1560	Open in IMG/M
3300031771\|Ga0318546_10258975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1198	Open in IMG/M
3300031792\|Ga0318529_10113643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1229	Open in IMG/M
3300031793\|Ga0318548_10090859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1452	Open in IMG/M
3300031798\|Ga0318523_10028256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2520	Open in IMG/M
3300031799\|Ga0318565_10069498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1660	Open in IMG/M
3300031805\|Ga0318497_10286438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300031821\|Ga0318567_10034250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2549	Open in IMG/M
3300031832\|Ga0318499_10343090	Not Available	574	Open in IMG/M
3300031845\|Ga0318511_10093970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1268	Open in IMG/M
3300031846\|Ga0318512_10047116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1911	Open in IMG/M
3300031879\|Ga0306919_10053639	Not Available	2681	Open in IMG/M
3300031879\|Ga0306919_10165140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1625	Open in IMG/M
3300031896\|Ga0318551_10032348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2543	Open in IMG/M
3300031896\|Ga0318551_10148663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1277	Open in IMG/M
3300031910\|Ga0306923_11281382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300031941\|Ga0310912_10238818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1396	Open in IMG/M
3300031941\|Ga0310912_10726000	Not Available	769	Open in IMG/M
3300031942\|Ga0310916_10451085	Not Available	1095	Open in IMG/M
3300031946\|Ga0310910_10219648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1478	Open in IMG/M
3300032041\|Ga0318549_10109044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1212	Open in IMG/M
3300032044\|Ga0318558_10112305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1285	Open in IMG/M
3300032051\|Ga0318532_10059524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1319	Open in IMG/M
3300032051\|Ga0318532_10293331	Not Available	577	Open in IMG/M
3300032055\|Ga0318575_10147635	Not Available	1167	Open in IMG/M
3300032055\|Ga0318575_10197606	Not Available	1009	Open in IMG/M
3300032059\|Ga0318533_10039846	Not Available	3087	Open in IMG/M
3300032059\|Ga0318533_10666645	Not Available	763	Open in IMG/M
3300032060\|Ga0318505_10075080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1496	Open in IMG/M
3300032066\|Ga0318514_10269074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300032089\|Ga0318525_10297940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300032091\|Ga0318577_10269919	Not Available	814	Open in IMG/M
3300032094\|Ga0318540_10004453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5038	Open in IMG/M
3300032261\|Ga0306920_100058047	All Organisms → cellular organisms → Bacteria → Proteobacteria	5641	Open in IMG/M
3300033290\|Ga0318519_10543988	Not Available	702	Open in IMG/M
3300033290\|Ga0318519_10928326	Not Available	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.53%
Host-Associated	Host-Associated	4.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.97%
Plants	Host-Associated → Plants	4.47%
Unclassified	Environmental → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.12%
Unclassified	Environmental → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.33%
Loam	Environmental → Terrestrial → Soil → Loam	15.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.12%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.56%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.23%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.12%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.56%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.56%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.56%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.56%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_00430200	2124908016		GVMLAERVDFCVLAVGFAIAGCWSMVSGAVVVLALRAFGLGVG
KansclcFeb2_07414030	2124908045	Soil	MVAERVDFLVLAIGFAIAGCWSLVSGTVVVLALRAFGIIAG
KansclcFeb2_07303100	2124908045	Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
F14TC_1019536562	3300000559	Soil	MVAERVDFLVLAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
AF_2010_repII_A1DRAFT_100312313	3300000597	Forest Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMALRAFGVPVG*
AF_2010_repII_A1DRAFT_101424921	3300000597	Forest Soil	HVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG*
AF_2010_repII_A100DRAFT_10067155	3300000655	Forest Soil	AQRVDVFALAIAFAIAGCWSLVSGAVVVMGLRALGISAG*
AF_2010_repII_A100DRAFT_10251392	3300000655	Forest Soil	VIQAGRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG*
AF_2010_repII_A100DRAFT_10491192	3300000655	Forest Soil	MTAQRVDVFSLAIAFAIAGCWSLVSGAVVVLGLRAFGII
AF_2010_repII_A001DRAFT_100047142	3300000793	Forest Soil	MTAQRVDVFALAIAFAIAGCWSLVSGAVVVMGLRALGISAG*
AF_2010_repII_A001DRAFT_100339802	3300000793	Forest Soil	MTAQRVDVFALAIAFAIAGCWSLVSGAVVVLGLRAFGIIAG*
JGI1027J12803_1016460631	3300000955	Soil	FGTSGGDMTAERVDIFALAIGFTIASCWSLVSGAVVVMGLRAFGITAG*
JGI12627J18819_101384641	3300001867	Forest Soil	MLAERVDFCALAVGFAIAGCWSMVSGAVVVLALRAFGLGVG*
JGI25614J43888_100115635	3300002906	Grasslands Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG*
JGI25617J43924_102894712	3300002914	Grasslands Soil	TTGRVDFFALAIGFAISSCWSLVSGAVVVMGLRAFGLVVG*
Ga0066396_100274982	3300004267	Tropical Forest Soil	MTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG*
Ga0062595_1007157562	3300004479	Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG*
Ga0008092_113219942	3300004629	Tropical Rainforest Soil	MTVERVDVFALAIAFAIAGCWSLVSGAVVVMGLRAFSIVAG*
Ga0066395_107230222	3300004633	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSLIGGAIVVMGLRAFGISAG*
Ga0066674_102327762	3300005166	Soil	MTTDRVDFFALAIGFAISGCWSLVSGAVVVMGLGAFGLVVG*
Ga0066388_1005158013	3300005332	Tropical Forest Soil	MTAEQVEHVFALAIGFAIAGCWSLIGGAIVVMALRAFGISAG*
Ga0066388_1020413231	3300005332	Tropical Forest Soil	GLMTAERVDFFALAIGCAIAGCWSMVSGAVVVMALRAFGLAG*
Ga0066388_1025361392	3300005332	Tropical Forest Soil	MTTDRVDFFALAIGFAISSCWSLVSGAVVVIGLRAFGLVVG*
Ga0066388_1041408732	3300005332	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSVTGGAIVVMGLRAFGVPVG*
Ga0066388_1053264871	3300005332	Tropical Forest Soil	MTAQRVDVFALAIAFAIAGCWSLVSGAVVVMGLRAFGIIAG*
Ga0066388_1055242691	3300005332	Tropical Forest Soil	VIRAGRIMTAERVEHVFALAIGFAIAGCWSVTGGAILVMGLRAFGVPVG*
Ga0066388_1062220132	3300005332	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVAVG*
Ga0066388_1062437732	3300005332	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG*
Ga0066388_1068560721	3300005332	Tropical Forest Soil	HRGGNMTAERVDTFALAIGFAIAGCWSVVSGAIVVMGLRAFGITVG*
Ga0070709_100581855	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLAERVDFCVLAVGFAIAGCWSMVSGAVVVLALRAFGLGVG*
Ga0066687_108206301	3300005454	Soil	DIGVGLMTAERVDFFALAIGCAIAGCWSMVSGAVVVMALRAFGLVAG*
Ga0070706_1017877892	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTAERVEHVFALAIGFAIASCWSLIGGAIVVMGLRAFGISAG*
Ga0066695_103006222	3300005553	Soil	MGMGRMVAERVDFLALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0066661_101274193	3300005554	Soil	MGMGRMVAERVGFFALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0066698_105538972	3300005558	Soil	MGMGRMVAERVDFFALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0066905_1001818534	3300005713	Tropical Forest Soil	MTAERVDTFALAIGFAIAGCWSVVSGAIVVMGLRAFGITVG*
Ga0066905_1008698462	3300005713	Tropical Forest Soil	EHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG*
Ga0066905_1010714562	3300005713	Tropical Forest Soil	DRVDFFALAIGFAISSCWSLVSGAVVVIGLRAFGLVVG*
Ga0066905_1015637791	3300005713	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGV
Ga0066905_1021803241	3300005713	Tropical Forest Soil	VIRAGRIMTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG*
Ga0066905_1022074912	3300005713	Tropical Forest Soil	VIRAGRIMTAERVEHVFALAIGFAIAGCWSVTGGAIVVMGLRAFGVPVG*
Ga0066903_1041602032	3300005764	Tropical Forest Soil	MTAEWVEHVFALAIGFAMAGCWSVMSGAIVVMGLRAFGVPVG*
Ga0066903_1063583122	3300005764	Tropical Forest Soil	MTAERVDHVFALAIGFAIAGCWSLIGGAIVAMWLRAFGISAG*
Ga0081455_1000381518	3300005937	Tabebuia Heterophylla Rhizosphere	MVAERVDFLALAIGFAIAGCWSLVSGMVVVLALRAFGILPG*
Ga0081455_104630702	3300005937	Tabebuia Heterophylla Rhizosphere	SRGVIRVGRVMTAERVEHVFALAMGFAIAGCWSVICGAIVVMGLRAFGISAG*
Ga0070716_1009677232	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTAERVDFFALAIGCAIAGCWSMVSGTVVVMALRAFGLVAG*
Ga0066660_101951562	3300006800	Soil	MTAEQVEHVFALAIGFAIASCWSLIGGAIVVMGLRAFGISAG*
Ga0075425_1019146861	3300006854	Populus Rhizosphere	MTAERVDFVALAIGFAITGCWSLVSGTVVVMGLRAFGITAG*
Ga0099827_101307461	3300009090	Vadose Zone Soil	MTEERVDIFALAIGFAIAGCWSLVSGAVVVMGLRAFGITAG*
Ga0111539_131564022	3300009094	Populus Rhizosphere	MLAERVDFCVLAVGFAIAVCWSMVSGAVVVLALRAFGLGVG*
Ga0075418_101335172	3300009100	Populus Rhizosphere	MVAERVDLLALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0066709_1004759323	3300009137	Grasslands Soil	MTAERVDFFALAIGCAIAGCWSMVSGAVVVMALREFGLVAG*
Ga0066709_1018913142	3300009137	Grasslands Soil	MTTDRVDFFALAVGFAISGCWSLVSGAVVVMGLGAFGLVVG*
Ga0099792_106899442	3300009143	Vadose Zone Soil	MTWEHGVGVMTAERVDFFALAIGCAIAGCWSMVSGTVVVMALRAFGLVAG*
Ga0114129_100643747	3300009147	Populus Rhizosphere	MGRMVAERVDLLALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0114129_106355703	3300009147	Populus Rhizosphere	MGRMVAERVDFFALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0126374_104586001	3300009792	Tropical Forest Soil	MTAERVDFFALAIGCAIAGCWSMVSGAVVVMALRAFGLAAG*
Ga0126374_112304711	3300009792	Tropical Forest Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPV
Ga0126312_112536202	3300010041	Serpentine Soil	MGRMVAERVDFLVLAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0126380_112523121	3300010043	Tropical Forest Soil	MGRMLAERVDLTALAIGFAIAGCWSLVSGTVLVLALRAFGIIAG*
Ga0126384_100666494	3300010046	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSLICGAIVVMGLRAFGIAAG*
Ga0126384_104317262	3300010046	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSVTGGAILVMGLRAFGVPVG*
Ga0126384_112830551	3300010046	Tropical Forest Soil	MTAERVDFFALAIGCAIAGCWSMVSGAVVVMALRAFGLVAG*
Ga0126382_121859711	3300010047	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSLIGGAIVVMGLRAFGISVG*
Ga0126379_121216201	3300010366	Tropical Forest Soil	MTVERVDVFALAIAFAIAGCWSLVSGAVVVMGLRAFSIV
Ga0126379_121484851	3300010366	Tropical Forest Soil	RVDVFALAIAFAIAGCWSLVSGAVVVMGLRAFGISAG*
Ga0126381_1012966471	3300010376	Tropical Forest Soil	MTAERVDVFALAIAFSIAGCWSLVSGAVVVMGLRAFSIVAG*
Ga0126381_1048605572	3300010376	Tropical Forest Soil	MTAERVDHVFALAIGFAIAGCWSLIGGAIVVMGLRAFGISVG*
Ga0126383_125117561	3300010398	Tropical Forest Soil	MTAERVEHVFALVIGFAIAGCWSVTGGAIVVMGLRAFGVPVG*
Ga0124850_10115654	3300010863	Tropical Forest Soil	MTAEQVEHVFGLAIGFAIAGCWSVMSGAIVVMALRAFGVPVG*
Ga0137382_100151661	3300012200	Vadose Zone Soil	MTAERVDFFALAIGFAIAGCWSMVSGAVVVMALRALSLVAG*
Ga0137363_100800995	3300012202	Vadose Zone Soil	MTTGRVDFFALAIGFAISSCWSQVSGAVVVMGLRAFGLVVG*
Ga0137362_117086681	3300012205	Vadose Zone Soil	MTTGRVDFFALAIGFAISSCWSLVSGAVVVMGLRAFGLVVG*
Ga0137381_114028042	3300012207	Vadose Zone Soil	MTAERVDIFALAIGFAIAGCWSLVSGAVVVMGLRAFGITAG*
Ga0137378_117479981	3300012210	Vadose Zone Soil	QTGLFEGGVMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG*
Ga0137370_102698601	3300012285	Vadose Zone Soil	ERVDFFALAIGFAIAGCWSMVSGAVVVMALRALSLVAG*
Ga0137367_100370422	3300012353	Vadose Zone Soil	MGMGRMIAERVDFLALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG*
Ga0137369_105712962	3300012355	Vadose Zone Soil	MTAERVEHVFTLAVGFAIASCWSLIGGAIVVMGLRAFGISAG*
Ga0137371_110452601	3300012356	Vadose Zone Soil	MTTDRVDFFALAIGFAISGCWSLVSGAVVVMGLGAFGLGVG*
Ga0137360_102924763	3300012361	Vadose Zone Soil	VEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG*
Ga0137361_107721831	3300012362	Vadose Zone Soil	MTTDRVDYFALAIGFAISSCWSLVSGAVVVMGLRTFGLGVG*
Ga0126375_102028772	3300012948	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAILVMGLRAFGVPVG*
Ga0164299_104618501	3300012958	Soil	EGGVMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG*
Ga0164301_105050552	3300012960	Soil	MLAERVDFCVLAVGFAIAGCWSMISGAVVVLALRAFGLGVG*
Ga0164302_100182151	3300012961	Soil	MLAERVDFCVLAVGFAIAGCWSMVSGAVVVLALRAFGLG
Ga0126369_102784893	3300012971	Tropical Forest Soil	MTAERVDHVFALAIGFAIAGCWSLIGGAIVVMGLRAFGISAG*
Ga0126369_106930001	3300012971	Tropical Forest Soil	RIMTAEPVEHVFALAIGFAIAGCWSVMSGAIVVMALRAFGVPVG*
Ga0182036_108971821	3300016270	Soil	RIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0182035_109422361	3300016341	Soil	MTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRA
Ga0182032_113998131	3300016357	Soil	AERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0182034_105400992	3300016371	Soil	MTAQRVDVFALAIAFAIAGCWSLVSGAVVVLGLRAFG
Ga0182034_109785932	3300016371	Soil	GRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0182034_110639931	3300016371	Soil	VIRAGRIMTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRA
Ga0182039_106963771	3300016422	Soil	MTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRA
Ga0066655_103428342	3300018431	Grasslands Soil	MTTDRVDFFALAIGFAISGCWSLVSGAVVVMGLEAFGLVVG
Ga0066655_113886561	3300018431	Grasslands Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLR
Ga0066667_100976794	3300018433	Grasslands Soil	MTTDRVDFFALAIGFAISGCWSLVSGAVVVMGLGAFGLVVG
Ga0066667_103014383	3300018433	Grasslands Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0066667_114982072	3300018433	Grasslands Soil	MTTDRVDFFALAVGFAISGCWSLVSGAVVVMGLGAFGLVVG
Ga0066667_116319472	3300018433	Grasslands Soil	MGMGRMVAERVDFFALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG
Ga0066662_122834451	3300018468	Grasslands Soil	MTAERVEHVFALAIGFAIASCWSLIGGAIVVMGLRAFGISAG
Ga0066669_105461742	3300018482	Grasslands Soil	MTAERVDFFALAIGCAIAGCWSMVSGAVVVMALRAFGLVAG
Ga0210403_107609812	3300020580	Soil	MTAERVDFFALAIGCAIAGCWSMVSGTVVVMALRAFGLVAG
Ga0213877_101230971	3300021372	Bulk Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFG
Ga0210410_115819152	3300021479	Soil	MTAEQVEHVFALAVGLALAGCWSVMSGAIVVMGLRAFGVPVG
Ga0126371_104600091	3300021560	Tropical Forest Soil	MTTDRVDFFALAIGFAISSCWSLVSGAVVVIGLRAFGLVVG
Ga0126371_106516832	3300021560	Tropical Forest Soil	MTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0126371_110088901	3300021560	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSVTGGAIVVMGLRAFGVPVG
Ga0126371_112407882	3300021560	Tropical Forest Soil	MTAERVDHVFALAIGFAIAGCWSLIGGAIVVMGLRAFGISAG
Ga0207653_100057044	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTAEQVEHVFSLAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0207646_112156301	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GGVMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0209240_10668023	3300026304	Grasslands Soil	MTTDRVDYFALAIGFAISSCWSLVSGAVVVMGLRTFGLGVG
Ga0209761_11742792	3300026313	Grasslands Soil	LIQHNVAWRVDFFALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG
Ga0209647_10152407	3300026319	Grasslands Soil	MTEERVDIFALAIGFAIAGCWSLVSGAVVVMGLRAFGITAG
Ga0209647_10921233	3300026319	Grasslands Soil	MTTGRVDFFALAIGFAISSCWSLVSGAVVVMGLRAFGLVVG
Ga0209801_13517221	3300026326	Soil	VMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0257172_10909752	3300026482	Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVS
Ga0209465_103605781	3300027874	Tropical Forest Soil	MTAERVEHVFALAIGFAIAGCWSLIGAAIVVMGLRAFGISAG
Ga0209590_102466353	3300027882	Vadose Zone Soil	MTAERVDIFALAIGFAIAGCWSLVSGAVVVMGLRAFGITAG
Ga0209488_105705732	3300027903	Vadose Zone Soil	MTWEHGVGVMTAERVDFFALAIGCAIAGCWSMVSGTVVVMALRAFGLVAG
Ga0209382_106534282	3300027909	Populus Rhizosphere	MGRMVAERVDLLALAIGFAIAGCWSLVSGTVVVLALRAFGIIAG
Ga0307282_104849052	3300028784	Soil	MLAERVDFCALAVGFAIAGCWSMVSGAVVVLALRAFSLGVG
Ga0318534_104539661	3300031544	Soil	MTAQRVDVFALAIAFAIAGCWSLVSGAVVVLGLRAFGIIAG
Ga0318541_101033751	3300031545	Soil	EQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318541_104049232	3300031545	Soil	MTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318538_101766443	3300031546	Soil	VEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0310915_102492081	3300031573	Soil	GRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318555_101426721	3300031640	Soil	GRIMTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318555_102079343	3300031640	Soil	IMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318542_100459371	3300031668	Soil	ERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0318542_101124073	3300031668	Soil	TAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318542_103346361	3300031668	Soil	MTAEQVEHVFALAIGFAIAGCWSVVSGAIVVMGLRAFGVPVG
Ga0318542_105547011	3300031668	Soil	VEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318561_100527683	3300031679	Soil	IMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318572_109532922	3300031681	Soil	AGRIMTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318560_101414343	3300031682	Soil	IRAGRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318560_104026792	3300031682	Soil	IRAGRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318560_107341572	3300031682	Soil	AEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0306917_100051031	3300031719	Soil	RVMTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0318493_100304014	3300031723	Soil	LIRAGRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318493_100754923	3300031723	Soil	AERVERVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318502_101886031	3300031747	Soil	IMTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318537_103792531	3300031763	Soil	TAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318554_101088291	3300031765	Soil	RAGRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318546_102589753	3300031771	Soil	GRVMTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0318529_101136433	3300031792	Soil	IMTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318548_100908593	3300031793	Soil	HVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318523_100282564	3300031798	Soil	RAGRIMTAERVERVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318565_100694983	3300031799	Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318497_102864382	3300031805	Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVP
Ga0318567_100342501	3300031821	Soil	MTAERVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFG
Ga0318499_103430901	3300031832	Soil	RAGRVMTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0318511_100939703	3300031845	Soil	AEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318512_100471161	3300031846	Soil	RIMTAERVERVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0306919_100536394	3300031879	Soil	AERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0306919_101651401	3300031879	Soil	EQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVSVG
Ga0318551_100323481	3300031896	Soil	MTAERVERVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318551_101486631	3300031896	Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGV
Ga0306923_112813822	3300031910	Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRA
Ga0310912_102388181	3300031941	Soil	MTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFG
Ga0310912_107260001	3300031941	Soil	MTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAF
Ga0310916_104510852	3300031942	Soil	VIRAGRIMTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFG
Ga0310910_102196481	3300031946	Soil	SKGGVMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318549_101090443	3300032041	Soil	VIQAGRVMTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0318558_101123051	3300032044	Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVP
Ga0318532_100595242	3300032051	Soil	MTAERVEDVFVLAIGFANVGCWSVMSGVIVVMGLRAFGVPVG
Ga0318532_102933312	3300032051	Soil	AGRIMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318575_101476351	3300032055	Soil	MTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318575_101976061	3300032055	Soil	VIRAGRVMTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAFGVPVG
Ga0318533_100398463	3300032059	Soil	MTAEQGEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318533_106666451	3300032059	Soil	MTTEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLR
Ga0318505_100750801	3300032060	Soil	NGVIRRGGVMTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0318514_102690742	3300032066	Soil	MTAEQVEHVFALAIGFAIAGCWSVMSGAIVVMGLSAFGV
Ga0318525_102979401	3300032089	Soil	MTAERVERVFALAIGFAIAGCWSVMSGAIVVMGLRA
Ga0318577_102699191	3300032091	Soil	VIRAGRIMTTEQVEHVFALAIGFAIAGCWSVMSGAIVV
Ga0318540_100044534	3300032094	Soil	MTAERVEQVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG
Ga0306920_1000580471	3300032261	Soil	VIQAGRVMTAERVEDVFVLAIGFAIVGCWSVMSGVIVVMGLRAF
Ga0318519_105439881	3300033290	Soil	MTAQRVDVFALAIAFAIAGCWSLVSGAVVVLGAFGIIAG
Ga0318519_109283262	3300033290	Soil	VIRAGLIMTAERVERVFALAIGFAIAGCWSVMSGAIVVMGLRAFGVPVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032764

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences