Metagenome / Metatranscriptome Family F032781

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F032781
Family Type	Metagenome / Metatranscriptome
Number of Sequences	179
Average Sequence Length	41 residues
Representative Sequence	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAG
Number of Associated Samples	143
Number of Associated Scaffolds	179

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.21 %
% of genes near scaffold ends (potentially truncated)	92.18 %
% of genes from short scaffolds (< 2000 bps)	85.47 %
Associated GOLD sequencing projects	129
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.156 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.905 % of family members)
Environment Ontology (ENVO)	Unclassified (29.050 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.955 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 20.29% Coil/Unstructured: 79.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 179 Family Scaffolds
PF00378	ECH_1	45.25
PF13561	adh_short_C2	6.70
PF00230	MIP	4.47
PF13376	OmdA	1.68
PF00578	AhpC-TSA	1.68
PF10517	DM13	1.68
PF01668	SmpB	1.12
PF13602	ADH_zinc_N_2	1.12
PF00106	adh_short	0.56
PF08843	AbiEii	0.56
PF13730	HTH_36	0.56
PF00175	NAD_binding_1	0.56
PF11412	DsbC	0.56
PF16576	HlyD_D23	0.56
PF00970	FAD_binding_6	0.56
PF06912	DUF1275	0.56
PF07080	DUF1348	0.56
PF00872	Transposase_mut	0.56
PF03992	ABM	0.56
PF04224	DUF417	0.56
PF01850	PIN	0.56
PF03328	HpcH_HpaI	0.56
PF10130	PIN_2	0.56
PF00512	HisKA	0.56
PF00753	Lactamase_B	0.56
PF07730	HisKA_3	0.56
PF12697	Abhydrolase_6	0.56
PF08570	DUF1761	0.56
PF11172	DUF2959	0.56
PF03466	LysR_substrate	0.56
PF07689	KaiB	0.56
PF13628	DUF4142	0.56

COG ID	Name	Functional Category	% Frequency in 179 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	4.47
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	1.12
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.56
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.56
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.56
COG3059	Reactive chlorine resistance protein RclC/YkgB, DUF417 family	Defense mechanisms [V]	0.56
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.56
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.56
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.56
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.56
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.56
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.56
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.56
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.16 %
Unclassified	root	N/A	31.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.16 %
Unclassified	root	N/A	31.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.16 %
Unclassified	root	N/A	31.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.03 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.41 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.47 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.12 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.56 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.41 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.47 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.12 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.56 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.12 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.56 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.56 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.56 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.56 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.12 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.56 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.56 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.56 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.56 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002JSYKU	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300001661\|JGI12053J15887_10083035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1760	Open in IMG/M
3300001661\|JGI12053J15887_10217990	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300002245\|JGIcombinedJ26739_100660025	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300002916\|JGI25389J43894_1034797	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005174\|Ga0066680_10924985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300005184\|Ga0066671_10391493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	888	Open in IMG/M
3300005436\|Ga0070713_102236716	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005468\|Ga0070707_101042382	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005468\|Ga0070707_102258525	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005540\|Ga0066697_10223289	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300005554\|Ga0066661_10518117	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005555\|Ga0066692_10022164	All Organisms → cellular organisms → Bacteria → Proteobacteria	3244	Open in IMG/M
3300005558\|Ga0066698_10364673	Not Available	997	Open in IMG/M
3300005559\|Ga0066700_10179138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300005561\|Ga0066699_10448400	Not Available	923	Open in IMG/M
3300005568\|Ga0066703_10560208	Not Available	670	Open in IMG/M
3300005598\|Ga0066706_10008263	All Organisms → cellular organisms → Bacteria	5513	Open in IMG/M
3300005598\|Ga0066706_10041618	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300005602\|Ga0070762_10604003	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005617\|Ga0068859_100969277	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300005764\|Ga0066903_104172433	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005834\|Ga0068851_10471075	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005921\|Ga0070766_10007140	All Organisms → cellular organisms → Bacteria	5667	Open in IMG/M
3300005921\|Ga0070766_10120425	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300006028\|Ga0070717_10019071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5371	Open in IMG/M
3300006047\|Ga0075024_100801678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300006052\|Ga0075029_100820563	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006173\|Ga0070716_100100417	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300006173\|Ga0070716_100684101	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300006176\|Ga0070765_100824395	Not Available	877	Open in IMG/M
3300006176\|Ga0070765_101053725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	769	Open in IMG/M
3300006796\|Ga0066665_11122463	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300006797\|Ga0066659_10234282	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300006893\|Ga0073928_10098600	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300007982\|Ga0102924_1227688	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300009012\|Ga0066710_101316503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1120	Open in IMG/M
3300009038\|Ga0099829_11533568	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009089\|Ga0099828_10094947	All Organisms → cellular organisms → Bacteria	2569	Open in IMG/M
3300009090\|Ga0099827_10817879	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300009090\|Ga0099827_11155626	Not Available	673	Open in IMG/M
3300009094\|Ga0111539_10654734	Not Available	1223	Open in IMG/M
3300009094\|Ga0111539_12923014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300009137\|Ga0066709_101638851	Not Available	918	Open in IMG/M
3300009137\|Ga0066709_103948941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010046\|Ga0126384_10772128	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300010343\|Ga0074044_10835614	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010358\|Ga0126370_11523048	Not Available	637	Open in IMG/M
3300010359\|Ga0126376_11374705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300010361\|Ga0126378_11315571	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300010361\|Ga0126378_12397858	Not Available	602	Open in IMG/M
3300010376\|Ga0126381_104801556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300010379\|Ga0136449_102367794	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300010398\|Ga0126383_12658584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300011269\|Ga0137392_11508083	Not Available	531	Open in IMG/M
3300011269\|Ga0137392_11548872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300011270\|Ga0137391_10091187	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300012189\|Ga0137388_10578488	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300012200\|Ga0137382_10952430	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012201\|Ga0137365_10728676	Not Available	724	Open in IMG/M
3300012202\|Ga0137363_10937032	Not Available	735	Open in IMG/M
3300012205\|Ga0137362_11143224	Not Available	661	Open in IMG/M
3300012206\|Ga0137380_11590829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012285\|Ga0137370_10778536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012361\|Ga0137360_10780669	Not Available	822	Open in IMG/M
3300012362\|Ga0137361_11769471	Not Available	536	Open in IMG/M
3300012582\|Ga0137358_10461980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	856	Open in IMG/M
3300012582\|Ga0137358_10491549	Not Available	827	Open in IMG/M
3300012911\|Ga0157301_10281335	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012917\|Ga0137395_11266673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300012918\|Ga0137396_10058451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2666	Open in IMG/M
3300012918\|Ga0137396_11151259	Not Available	551	Open in IMG/M
3300012923\|Ga0137359_10323124	All Organisms → cellular organisms → Bacteria → Acidobacteria	1372	Open in IMG/M
3300012923\|Ga0137359_11392942	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012923\|Ga0137359_11614918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300012923\|Ga0137359_11620444	Not Available	535	Open in IMG/M
3300012925\|Ga0137419_10192965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1503	Open in IMG/M
3300012925\|Ga0137419_10990200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012929\|Ga0137404_12210444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012944\|Ga0137410_10347603	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300012957\|Ga0164303_10117272	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300012971\|Ga0126369_10986598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	930	Open in IMG/M
3300012971\|Ga0126369_11710258	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300012976\|Ga0134076_10514363	Not Available	548	Open in IMG/M
3300012977\|Ga0134087_10487563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012986\|Ga0164304_11363291	Not Available	581	Open in IMG/M
3300014969\|Ga0157376_10295594	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300015053\|Ga0137405_1098325	Not Available	1102	Open in IMG/M
3300015241\|Ga0137418_10060687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3462	Open in IMG/M
3300016341\|Ga0182035_10421739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1125	Open in IMG/M
3300016371\|Ga0182034_11363540	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300018433\|Ga0066667_11207773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300018468\|Ga0066662_10589717	Not Available	1037	Open in IMG/M
3300020170\|Ga0179594_10227867	Not Available	701	Open in IMG/M
3300020199\|Ga0179592_10233242	Not Available	829	Open in IMG/M
3300020583\|Ga0210401_10293845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300020583\|Ga0210401_10440046	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300021046\|Ga0215015_10164705	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300021086\|Ga0179596_10118524	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300021086\|Ga0179596_10648741	Not Available	535	Open in IMG/M
3300021088\|Ga0210404_10128855	All Organisms → cellular organisms → Bacteria → Acidobacteria	1307	Open in IMG/M
3300021168\|Ga0210406_10984892	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300021170\|Ga0210400_10068799	All Organisms → cellular organisms → Bacteria	2769	Open in IMG/M
3300021170\|Ga0210400_10970368	Not Available	692	Open in IMG/M
3300021170\|Ga0210400_11163498	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300021171\|Ga0210405_10030240	All Organisms → cellular organisms → Bacteria	4342	Open in IMG/M
3300021178\|Ga0210408_11236786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300021180\|Ga0210396_10086253	All Organisms → cellular organisms → Bacteria	2847	Open in IMG/M
3300021180\|Ga0210396_10777965	Not Available	822	Open in IMG/M
3300021181\|Ga0210388_10780988	Not Available	829	Open in IMG/M
3300021402\|Ga0210385_10795842	Not Available	725	Open in IMG/M
3300021404\|Ga0210389_11245259	Not Available	571	Open in IMG/M
3300021405\|Ga0210387_10177214	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300021420\|Ga0210394_10017923	All Organisms → cellular organisms → Bacteria	6647	Open in IMG/M
3300021432\|Ga0210384_11340419	Not Available	620	Open in IMG/M
3300021477\|Ga0210398_10092674	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300021479\|Ga0210410_10724573	Not Available	877	Open in IMG/M
3300021559\|Ga0210409_10154259	All Organisms → cellular organisms → Bacteria	2103	Open in IMG/M
3300022557\|Ga0212123_10000924	All Organisms → cellular organisms → Bacteria	87714	Open in IMG/M
3300025910\|Ga0207684_10598011	Not Available	942	Open in IMG/M
3300025922\|Ga0207646_10449148	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300025928\|Ga0207700_10244334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531	Open in IMG/M
3300025972\|Ga0207668_12016199	Not Available	520	Open in IMG/M
3300026301\|Ga0209238_1020122	All Organisms → cellular organisms → Bacteria	2549	Open in IMG/M
3300026309\|Ga0209055_1070995	All Organisms → cellular organisms → Bacteria → Proteobacteria	1453	Open in IMG/M
3300026326\|Ga0209801_1180502	Not Available	867	Open in IMG/M
3300026328\|Ga0209802_1174688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300026329\|Ga0209375_1062099	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300026361\|Ga0257176_1016411	Not Available	1034	Open in IMG/M
3300026508\|Ga0257161_1097887	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300026514\|Ga0257168_1042675	Not Available	987	Open in IMG/M
3300026538\|Ga0209056_10112291	Not Available	2188	Open in IMG/M
3300026548\|Ga0209161_10525259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300026552\|Ga0209577_10370007	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300026552\|Ga0209577_10742562	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300026557\|Ga0179587_10962248	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300027635\|Ga0209625_1083027	Not Available	718	Open in IMG/M
3300027655\|Ga0209388_1069813	Not Available	1012	Open in IMG/M
3300027663\|Ga0208990_1013650	All Organisms → cellular organisms → Bacteria	2705	Open in IMG/M
3300027663\|Ga0208990_1056033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300027667\|Ga0209009_1041221	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300027681\|Ga0208991_1080466	Not Available	981	Open in IMG/M
3300027855\|Ga0209693_10510267	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300027889\|Ga0209380_10009564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5678	Open in IMG/M
3300027903\|Ga0209488_10302187	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300027903\|Ga0209488_10844091	Not Available	646	Open in IMG/M
3300027903\|Ga0209488_11239138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300028036\|Ga0265355_1015251	Not Available	649	Open in IMG/M
3300028536\|Ga0137415_10054199	All Organisms → cellular organisms → Bacteria	3878	Open in IMG/M
3300028792\|Ga0307504_10115462	Not Available	874	Open in IMG/M
3300031057\|Ga0170834_105672708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300031057\|Ga0170834_113905486	Not Available	707	Open in IMG/M
3300031114\|Ga0308187_10453103	Not Available	518	Open in IMG/M
3300031122\|Ga0170822_16178376	Not Available	758	Open in IMG/M
3300031128\|Ga0170823_16202994	Not Available	621	Open in IMG/M
3300031231\|Ga0170824_111219155	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031474\|Ga0170818_104856885	Not Available	598	Open in IMG/M
3300031708\|Ga0310686_109334045	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031708\|Ga0310686_119640181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300031715\|Ga0307476_11090314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300031715\|Ga0307476_11248813	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031715\|Ga0307476_11311307	Not Available	528	Open in IMG/M
3300031744\|Ga0306918_10022755	All Organisms → cellular organisms → Bacteria	3832	Open in IMG/M
3300031754\|Ga0307475_10091866	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300031754\|Ga0307475_10385259	Not Available	1126	Open in IMG/M
3300031754\|Ga0307475_10990023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300031781\|Ga0318547_10900348	Not Available	552	Open in IMG/M
3300031823\|Ga0307478_10560236	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300031947\|Ga0310909_11499830	Not Available	537	Open in IMG/M
3300031962\|Ga0307479_10083848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3086	Open in IMG/M
3300032180\|Ga0307471_100174840	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300032180\|Ga0307471_103235359	Not Available	577	Open in IMG/M
3300032205\|Ga0307472_100792877	Not Available	864	Open in IMG/M
3300032515\|Ga0348332_14120615	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300032783\|Ga0335079_10258794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	1911	Open in IMG/M
3300032805\|Ga0335078_10372863	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300032805\|Ga0335078_11436223	Not Available	776	Open in IMG/M
3300032898\|Ga0335072_11088270	Not Available	723	Open in IMG/M
3300032898\|Ga0335072_11774326	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.09%
Host-Associated	Host-Associated	3.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.30%
Plants	Host-Associated → Plants	3.91%
Aquatic	Environmental → Aquatic	2.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.79%
Sediment	Environmental → Aquatic → Sediment	1.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.12%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.68%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.42%
Loam	Environmental → Terrestrial → Soil → Loam	13.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.12%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.12%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.12%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.12%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.56%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.56%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.56%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_07630500	2170459003	Grass Soil	MKRTESTSSAQILKKMQPEEFDIVILGGGTGATLAASI
JGI12053J15887_100830351	3300001661	Forest Soil	MKRTESTSSAQVLRKTQPEEFDLVILGGGTGSTIAAW
JGI12053J15887_102179903	3300001661	Forest Soil	MKSTETSPSAHVFKKSQPEEFDLVILGGGTGSTIAAWTFAGEGK
JGIcombinedJ26739_1006600251	3300002245	Forest Soil	MNRTADLSSPRVLEKTEPEEFDLVILGGGTGSTVAAWTFAGEGKR
JGI25389J43894_10347972	3300002916	Grasslands Soil	MNTLESVSSAQLLTKTDPEEFDLVVLGGGTGSTIAAWTFASGESVWR*
Ga0066680_109249851	3300005174	Soil	MKSNETCPSAPVLKKSQPEEFDLVILDGGTGSTIAAWTFAGE
Ga0066671_103914931	3300005184	Soil	MNTLESVSSAQLLTKTDPEEFDLVVLGGGTGSTIAAWTFASGESV
Ga0070713_1022367161	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRSTESSPSAHLLKKSQPEEIDLVILGGGTGSTVAAWTFAGEGKR
Ga0070707_1010423821	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKGTETSPSAHVKKSQPEEFDLVILGGGTGSTIAAWTFAGE
Ga0070707_1022585252	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKSFETSPSAHVFKKSQPEEFDLVILGGGTGSTIAAWTFAGEGK
Ga0066697_102232894	3300005540	Soil	MKSTETSPSAHGLKKSQPEEYDLVILGGGTGSTVAAWTFAAE
Ga0066661_105181172	3300005554	Soil	MKSTESSPSAHVLKKSQPEEFDLVILGGGTGSTVAAWTFAGEGKR
Ga0066692_100221641	3300005555	Soil	MNSTKSISSTQARRTQPEEFDFVILGGGTRSTIAAWT
Ga0066698_103646731	3300005558	Soil	MNSTKSISSAQARRTQPEEFDFVILGGGTRSTIAAWTLAGE
Ga0066700_101791381	3300005559	Soil	MKSTEDPSPSAHVFKKSQPEEFDLVILGGGTGSTIAAW
Ga0066699_104484001	3300005561	Soil	MKRTEITSSPQVLKKSQPEEFDLVILGGGTGSTIA
Ga0066703_105602081	3300005568	Soil	MNSTKTSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTF
Ga0066706_100082638	3300005598	Soil	MKSNETCPSAPVLKKSQPEEFDLVILDGGTGSTIAAWTFAGEGKRV
Ga0066706_100416185	3300005598	Soil	MKSNETSPSAPVLKKSQPEEFDLVILDGGTGSTIAAWTFAGEGKRV
Ga0070762_106040031	3300005602	Soil	MKRTERTPSPQVLKKAQPEEFDLLILGGGTGSTIAAWTFAGEGK
Ga0068859_1009692771	3300005617	Switchgrass Rhizosphere	MNSTKNASSAQARKRQPEEFDLVILGGGTGSTIAAWTFAGEGKQV
Ga0066903_1041724331	3300005764	Tropical Forest Soil	MKSTTNTSSAQSLKQTDSEAYDLVILGGGTGSTIAAWTFAKQGQ
Ga0068851_104710751	3300005834	Corn Rhizosphere	MKRTESTSSPQVVKKTQPEEFDLVILGGGTGSTIAAWT
Ga0070766_100071404	3300005921	Soil	MKSTENTSGQGCTKKQPEEFDLVILGGSMGWTIAAWFPHY*
Ga0070766_101204251	3300005921	Soil	MKSTESTSSAQVLKKAQPEEFDLVILGGGTGLTIDAWTFAGEGKRVAV
Ga0070717_100190717	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAGEGK
Ga0075024_1008016781	3300006047	Watersheds	MTTTGSSSTGRLIKDTQPEEFDLVILGGGTGSTVAA
Ga0075029_1008205632	3300006052	Watersheds	MKNTKNTSSPQPREKTQPEEFDLVILGGGTGSTIAAWTFAGE
Ga0070716_1001004173	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKGTVTSPSAHVKKSQPEEFDLVILGGGTGSTIAAWTFAGEGK
Ga0070716_1006841012	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNSTESTSSAQVLKNAQLEEFDLVILGGGTGSTIAAWTFAGEGKRVA
Ga0070765_1008243953	3300006176	Soil	MKRTESTSSPQVHKKAQPEEFDLVILGGGTGSTIA
Ga0070765_1010537253	3300006176	Soil	MKSTETSPSANVLKNSQQEEFDLVILGGGTGSTVAAWTFAGEGK
Ga0066665_111224631	3300006796	Soil	MKRTESISSAQVIKKTQPEESDLVILGRGTGSTIAAWW*
Ga0066659_102342821	3300006797	Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTVAAWTFAGEGKRV
Ga0073928_100986003	3300006893	Iron-Sulfur Acid Spring	MRSTESTLSAQVRNKTQPEEFDLVILAGGTGSTDQR*
Ga0102924_12276881	3300007982	Iron-Sulfur Acid Spring	MKRTQSTSSPQVLKKAQPEEFDLVILGGGTGSTIAAWTFAGE
Ga0066710_1013165033	3300009012	Grasslands Soil	MKSTETSPSDHVLKKSQAEEFDLVILGGGTGSTIAAWTFAGEG
Ga0099829_115335681	3300009038	Vadose Zone Soil	MKSLENTPSAQGLQKTQPEAFDLVMLGGGTGSTIAAWTFAGPLLL
Ga0099828_100949474	3300009089	Vadose Zone Soil	MKSLENTPSAQGLQKTQPEAFDLVMLGGGTGSTIAAWTFAG
Ga0099827_108178791	3300009090	Vadose Zone Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAA
Ga0099827_111556261	3300009090	Vadose Zone Soil	MKSTETSPSAHVFKKSQPKEFDLVILGGGTSSTIAAWTFGGEGKRVA
Ga0111539_106547341	3300009094	Populus Rhizosphere	MKSLENTPSAQGVTKTQPEAFDLVILGGGTGSTIAAWTFAGQ
Ga0111539_129230141	3300009094	Populus Rhizosphere	MDSMENTSPSQPFKKPQAEKFDVVILGGGTGSTIAAWTFAAEGK
Ga0066709_1016388511	3300009137	Grasslands Soil	MKSTKNTSSAQALKKTQLEEFDLVILGGGTGSTIAT*
Ga0066709_1039489412	3300009137	Grasslands Soil	MKNTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAGEGK
Ga0126384_107721282	3300010046	Tropical Forest Soil	MNSTKKSSSLQVTTSLQPEEFDLVFLGGGTGSTVAAWTFAGEGK
Ga0074044_108356141	3300010343	Bog Forest Soil	MTRTETASVTQTLTLQTTDVEEFDLVILGGGTGSTVAAWTFAAQ
Ga0126370_115230482	3300010358	Tropical Forest Soil	MKSTEKTSFTQTLENVEPEEFDLVILGGGTGSTIAAWTFA
Ga0126376_113747052	3300010359	Tropical Forest Soil	MQSVENTSFAQVLKKRQPEEFDLVILGGGTGSTIAAWTFAGQGK
Ga0126378_113155713	3300010361	Tropical Forest Soil	MNSIENTSSTHTVKSTRPEDFDLVILGGGTGSTVAAWTFAAEGK
Ga0126378_123978581	3300010361	Tropical Forest Soil	MKSTETSLSSHVLKQSQPEEFDLVILGGGTGSTIAAWT
Ga0126381_1048015562	3300010376	Tropical Forest Soil	MKSIENTSPTKASNNTQPEEFDVVILGGGTGSTIAAWTFAG
Ga0136449_1023677941	3300010379	Peatlands Soil	MKQTESTSSAQVLKKMQPEEFDLVILGGGTGSTIAAWTFA
Ga0126383_126585842	3300010398	Tropical Forest Soil	MKSMENTSSPQVLKKTQPEESDLVILGSGTGSTIAAWTFAG
Ga0137392_115080832	3300011269	Vadose Zone Soil	MKTLEHTSSISSPQKSTPEEYDLVILGGGTGGTIAAWTFAGQG
Ga0137392_115488722	3300011269	Vadose Zone Soil	MKSTEISPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAGEGKR
Ga0137391_100911875	3300011270	Vadose Zone Soil	MKRTESTSAAQALKKTQPEECDLVILGGGTGSTIAAWTFAG
Ga0137388_105784881	3300012189	Vadose Zone Soil	MKRTEGTSSAQVLKKTQPEEFDLVILGGGTGSTIAAWTF
Ga0137382_109524302	3300012200	Vadose Zone Soil	MENVSSAQLPKKADLEEFDLVILGGGTGSTIAAWTFAHQGQR
Ga0137365_107286762	3300012201	Vadose Zone Soil	MKRTESTSSAQVLEKTQPEEFDLVILGGGTGSTIAV*
Ga0137363_109370322	3300012202	Vadose Zone Soil	MNSTKNASSAQARRKTQPEEFDLVILGGGTGSTIAAWTFAGEG
Ga0137362_111432242	3300012205	Vadose Zone Soil	VNGQAQPSSAQSAKGSKPEEFDLVILGGGTGSTIAAWTFAAQG
Ga0137380_115908291	3300012206	Vadose Zone Soil	MKGTETSPSAHVKKSQPEEFDLVILGGGTGSTIAAWTFAGEGKR
Ga0137370_107785362	3300012285	Vadose Zone Soil	MNSTKNISSAQGRKTQPEEFDLVILGGGTGSTIAAWTFAGEG*
Ga0137360_107806691	3300012361	Vadose Zone Soil	MKSTETSPSSQVLKKSQPEEFDLVILGGGTGSTVAAWT
Ga0137361_117694712	3300012362	Vadose Zone Soil	MKTRERTSSTPSPQKSTPEEYDLVILGGGTGSTIATWTFAGQGK
Ga0137358_104619802	3300012582	Vadose Zone Soil	MENVSSVHQAKAADPEEYDIVILSGGTGSTIAAWTFAAEGKRV
Ga0137358_104915492	3300012582	Vadose Zone Soil	MSSTKNASLAQARKKTQPEEFDLVILGGGTGSTIAAWTFAAEGKQVA
Ga0157301_102813352	3300012911	Soil	MKNTKEVSLAQVSENMQPQEFDLVMLGGGTGSTVAAWTFAGE
Ga0137395_112666731	3300012917	Vadose Zone Soil	MNSTKNISSAQAHKTQPEEFDLVILGGGTGSTIAAWTFAGEGK
Ga0137396_100584511	3300012918	Vadose Zone Soil	MKSLENTPFAQGVTQTQPEAFYGGVLGGGTGATFS
Ga0137396_111512592	3300012918	Vadose Zone Soil	MKRPEPSPSAHVLKQSQPEEFDLVILGGGTGSTIAAWT
Ga0137359_103231242	3300012923	Vadose Zone Soil	MKRTESTSSAQVLKKTQPEEFDLVILGGGTGTKKTAWTFAGE
Ga0137359_113929422	3300012923	Vadose Zone Soil	MKRTESTSPPQVLNKTQPEEFDLVILGGGTGSTIAAW
Ga0137359_116149182	3300012923	Vadose Zone Soil	MNSTKNTSSAQSRKTKTQPEEFDLVILGGGTGSTVAAWTFAGEG
Ga0137359_116204441	3300012923	Vadose Zone Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTVAA
Ga0137419_101929651	3300012925	Vadose Zone Soil	MKTTESTSSTQVFKKTQPEEFDLVILGGGTGSTIAA
Ga0137419_109902003	3300012925	Vadose Zone Soil	MKGSESTSSAQILKKTQPEDFDLVILGGGTGSTIAAWTFAGEGKKVA
Ga0137404_122104442	3300012929	Vadose Zone Soil	MKSSKNASPAEASSKTQPEEFDLVILGGGTGSTVAAW
Ga0137410_103476031	3300012944	Vadose Zone Soil	MNSTKNTSSAQSRKKKTQPEEFDLVILGGGTGSTVA
Ga0164303_101172721	3300012957	Soil	MNRTESTSSTKVLKKTQPEKFDLVILGGGTGSTVAAW
Ga0126369_109865981	3300012971	Tropical Forest Soil	MKNTKQISAVEISRNMQPEEFDLVILGGGTGSTDAAWT
Ga0126369_117102582	3300012971	Tropical Forest Soil	MNNTKEISTAQLNKSLQPEEFDLVILGGGTGSTIAAWTFAG
Ga0134076_105143631	3300012976	Grasslands Soil	MKSIETSPSAHVLKRSQPEEFDLVILGGGSGSTVAAWTF
Ga0134087_104875632	3300012977	Grasslands Soil	MKRTESTSSAQVLKKTQPEEFDLVILGGGTGSTIAA*
Ga0164304_113632911	3300012986	Soil	MKTTETSPSARVLRKSQPEEFDLVILGGGTGSTVAAWTF
Ga0157376_102955941	3300014969	Miscanthus Rhizosphere	MKSAETSPSAPVLKKSQPEEFDLVILGGGTGSTVAAWTF
Ga0137405_10983252	3300015053	Vadose Zone Soil	MSSTKNASLAQARKKTQPEELDLVILGGGTGSTIAAWTFAAEGKQVAVV
Ga0137418_100606878	3300015241	Vadose Zone Soil	MKRTESISSAQVLKKTQPEEFDLVILGGGRGSTIAAWTFAGEGKQVA
Ga0182035_104217391	3300016341	Soil	MEKISSAQSPEKTNPEEHDLVILGGGTGSTIAAWTFARQGQH
Ga0182034_113635402	3300016371	Soil	MTSLENTRSVPTIQRAQPEDFDLVILGGGTGSTVAAW
Ga0066667_112077732	3300018433	Grasslands Soil	MKSNETSPSAPVLKKSQPEEFDLVILGGGTGSTIAAWTFAGEGK
Ga0066662_105897172	3300018468	Grasslands Soil	MKSTESSPSAHVLKKSQPEEFDLVILGGGTGSTVAAWTFAGEGKRV
Ga0179594_102278671	3300020170	Vadose Zone Soil	MRRTESTSSAQVLKKTQPEEFDLVILGGGTGSTIA
Ga0179592_102332421	3300020199	Vadose Zone Soil	MKSTKNASPAQARKKTQPEEFDLVILGGGTGSTIA
Ga0210401_102938453	3300020583	Soil	MNSTKNTSSAQAGKNTQPEEFDLVILGGGTGSTVAAWTFASEGKQV
Ga0210401_104400461	3300020583	Soil	MKSTEPSPSAEVLKKSQPEEFDLVILGGGTGSTVAAW
Ga0215015_101647052	3300021046	Soil	MNTLEGVSSAQLLKKTDPEEFDLVILGGGTGSTIAAWTFASEGER
Ga0179596_101185243	3300021086	Vadose Zone Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAG
Ga0179596_106487411	3300021086	Vadose Zone Soil	MNSMKNASPAQARKQTQPEEFDLVILGGGTGSTVAAW
Ga0210404_101288551	3300021088	Soil	MNTMESVSSAPLLKKTDPEEYDLVILGGGTGSTIAAWTFASQ
Ga0210406_109848921	3300021168	Soil	MKRTESTSSAQILKKTQPEEFDLVILGGGTGSTIAAWTFAGEGKQ
Ga0210400_100687995	3300021170	Soil	MKGTETSPSAHVMQSQPEEFDLLILGGGTGSTVAAWTFAGEGKR
Ga0210400_109703681	3300021170	Soil	MKNTETSPSAYVLESTQLEEFDLVILGGGTGSTIAAW
Ga0210400_111634981	3300021170	Soil	MKRTESTSSAQILKKTQPEEFDLVILGGGTGSTIAAW
Ga0210405_100302401	3300021171	Soil	MKNTETSPSAHVLENTQQEEFDLVILGGGTGSTIAA
Ga0210408_112367862	3300021178	Soil	MNSTKNISSAQTRNMQPEEFDLVILGSGTGSTIAAWAFAV
Ga0210396_100862534	3300021180	Soil	MNSTETSLSPQASKNTQPEDFDLVILGGGTGSTVAAWTFA
Ga0210396_107779651	3300021180	Soil	MKSTEPSPSAEVLKKSQPEEFDLVILGGGTGSTVA
Ga0210388_107809881	3300021181	Soil	MNTLEGVSSAQLLKKTDPEEFDLVILGGGTGSTIAAWTFASEGKRVA
Ga0210385_107958422	3300021402	Soil	MSTLENVSSAQLLNKTAPEEFDLVILGGGTGSTIAAWTFA
Ga0210389_112452591	3300021404	Soil	MTRTESTLSAQVLKKTQPEEFDLVILGGGTGSTIAAW
Ga0210387_101772143	3300021405	Soil	MNTAEEVTSAQPLKNRQPEEFDLVILGGGTGSTIAAWT
Ga0210394_100179236	3300021420	Soil	MKRTEINSSAQVLKKTQPEEFDLVILGGGTGSTVAAW
Ga0210384_113404191	3300021432	Soil	MKSTEPSPSAEVLKKSQPEEFDLVILGGGTGSTVAAWTFAGEGKRV
Ga0210398_100926744	3300021477	Soil	MKRTESTSSAQAIRKTQPEEFDLVILGGGTGSTIAAWTFAGEDKHVAV
Ga0210410_107245731	3300021479	Soil	MNSTETTPSAHVLKKSQPEEFDVVILGGGTGSTIAAWTFAGE
Ga0210409_101542593	3300021559	Soil	MTTEKPSSAKLRKQNQPEEYDLVILGGGTGSTIAAWTFASEG
Ga0212123_1000092472	3300022557	Iron-Sulfur Acid Spring	MRSTESTLSAQVRNKTQPEEFDLVILAGGTGSTDQR
Ga0207684_105980111	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKATETSPSAHVKKSQPEEFDLLILGGGTGSTIAAWTFA
Ga0207646_104491483	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKTGETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAAEG
Ga0207700_102443341	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRSTESSPSAHLLKKSQPEEIDLVILGGGTGSTVAAWTFAGE
Ga0207668_120161991	3300025972	Switchgrass Rhizosphere	MKRTESTSSAQVLEKTKPEEFDLVILGGGTGSTIAALLA
Ga0209238_10201224	3300026301	Grasslands Soil	MNTLESVSSAQLLTKTDPEEFDLVVLGGGTGSTIAAWTFASGESVWR
Ga0209055_10709953	3300026309	Soil	MKGIESTASPQVLEKSQPEEFDLVILGGGTGSTIAAWTFAG
Ga0209801_11805022	3300026326	Soil	MKGTETSPSAHVKKSQPEEFDLVILGGGTGSTVAAWPFAG
Ga0209802_11746883	3300026328	Soil	MKSTEDPSPSAHVFKKSQPEEFDLVILGGGTGSTIAAWT
Ga0209375_10620993	3300026329	Soil	MKSTEISPSAHVLKKSQPEEFDLVIFGGGTGSTVA
Ga0257176_10164111	3300026361	Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWT
Ga0257161_10978871	3300026508	Soil	MKRTESTSSAQILKKTQPEEFDLVILGGGTGSTIAAWTF
Ga0257168_10426751	3300026514	Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAGEGKR
Ga0209056_101122912	3300026538	Soil	MKRTESISSAQVIKKTQPEESDLVILGRGTGSTIAAWW
Ga0209161_105252592	3300026548	Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTIAAWTFAGEGKQV
Ga0209577_103700072	3300026552	Soil	MNSTKNISSAQGRKTQPEEFDLVILGGGTGSTIAAWTFAGEG
Ga0209577_107425622	3300026552	Soil	MKSTEDPSPSAHVFKKSQPEEFDLVILGGGTGSTIAAWTFAGEG
Ga0179587_109622482	3300026557	Vadose Zone Soil	MKRAETSPTAHVLKKTQPEKFDLVILGGGTGSTVAAGTFAGEGKRVAVVDRRY
Ga0209625_10830271	3300027635	Forest Soil	MKRTESTSSTQVLTKTQPEEFDLVILGGGTGATIAAWTFA
Ga0209388_10698131	3300027655	Vadose Zone Soil	MKSTETSSSAHGLKKSQPEEFDLVIFGGGTGSTVAAWTFAGEGKR
Ga0208990_10136503	3300027663	Forest Soil	MKSTKNTLPAQARKKTQPEEFDLVILGGGTGSTIAAWTFAG
Ga0208990_10560333	3300027663	Forest Soil	MKSTETSPSAHVLKKSQPEEFDLVILGGGTGSTVAAWTFA
Ga0209009_10412213	3300027667	Forest Soil	MNKKNTSSAPASKKTQPEEFDLVILGGGTGSTIAAWTFAS
Ga0208991_10804662	3300027681	Forest Soil	MKRTESTSSAQVLKKTQPEEFDLVILGGGTGSTIAA
Ga0209693_105102672	3300027855	Soil	MKPTESISSPRILKKTQQEEFDLVILGGGTGSTIAAWTFAGE
Ga0209380_100095644	3300027889	Soil	MKSTENTSGQGCTKKQPEEFDLVILGGSMGWTIAAWFPHY
Ga0209488_103021871	3300027903	Vadose Zone Soil	MNRTESTSSAQVLKTQPEEFDLVILGGGTGSTIAAWTFAGEGKR
Ga0209488_108440911	3300027903	Vadose Zone Soil	MKSTKNASPAQARKKTQPEEFDLVILGGGTGSTIAAWIFAGEGKQVAV
Ga0209488_112391381	3300027903	Vadose Zone Soil	MKTTESTASAQILTKTQPEEFDLVILGGGTGSTIAAWTFAGEGKRV
Ga0265355_10152512	3300028036	Rhizosphere	MNRMESPSAAHRVKKSQPEEFDLVILGGGTGSTVAAWTFAGEGKRR
Ga0137415_100541997	3300028536	Vadose Zone Soil	MKTLEHTSSISSPQKSTPEEYDLVILGGGTGGTIAAWTFAGQ
Ga0307504_101154622	3300028792	Soil	MKSTETSPSAHVLEKSQPEEFDLVILGGGTGSTVAAWTFAGEGK
Ga0170834_1056727082	3300031057	Forest Soil	MKRTENISSAPILKKSQPEEFDLVILGGGTGSTIAAWTFAGE
Ga0170834_1139054861	3300031057	Forest Soil	MKSTENTSSTPAPKKTQPEEFDLVILGGGTGSTVAAWTFAAEG
Ga0308187_104531032	3300031114	Soil	MKSLENTPSAQVLKQTPPEEFDLVILGGGTGSTIAA
Ga0170822_161783761	3300031122	Forest Soil	MKSTETSPSADVLKKTQPEEFDLVILGGGTGSTVAAW
Ga0170823_162029942	3300031128	Forest Soil	MNNTKNTSSAQARKNTQPEEFDLVILGGGTGSTIAAWTFAGEGKQVA
Ga0170824_1112191552	3300031231	Forest Soil	MKRTESTSSAQILKKTQPEEFDIVILGGGTGATLAASI
Ga0170818_1048568852	3300031474	Forest Soil	MKSTETSPSSHVLKKSQPEEFDLVILGGGTGSTIAAWTFAGEG
Ga0310686_1093340451	3300031708	Soil	MNTLEGVSSAQLLKKTDPEEFDLVILGGGTGSTIAAWTFASE
Ga0310686_1196401811	3300031708	Soil	MNSTKNISSAQAHKTQPEEFDLVILGGGTGSTIAAWTF
Ga0307476_110903141	3300031715	Hardwood Forest Soil	MNRTETTSSPQVFKKSQPEEFDLVILGGGTGSTVAA
Ga0307476_112488132	3300031715	Hardwood Forest Soil	VKVGSKVKQVSTETPLQTNPEEFDIVILGGGTGGTVAAWTFAGEGR
Ga0307476_113113072	3300031715	Hardwood Forest Soil	MKRTKSTSSPQVLKKAQPEEFDLVILGGGTGSTIAAWTF
Ga0306918_100227557	3300031744	Soil	MQSTSNSSSAKVFTKTQPEEFDLVILGGGTGSTIAA
Ga0307475_100918661	3300031754	Hardwood Forest Soil	MNHTESTSSSSVQIFKKSQPEEFDLVILGGGTGSTIAAWTFAG
Ga0307475_103852593	3300031754	Hardwood Forest Soil	MKSTKTPPSDHVLKKSQPEEFDLVILGGGTGSTIAAWTF
Ga0307475_109900231	3300031754	Hardwood Forest Soil	MKSAETTSSAQVLKQTQPEEFDLVILGGGTGSTIAAWTFAGEGKR
Ga0318547_109003481	3300031781	Soil	MNPIESSSATAKTTQPEEFDLVILGGGTGSTIAAWT
Ga0307478_105602361	3300031823	Hardwood Forest Soil	MKGTESISSAQVLKKTEPEEFDLVILGGGTGSTIAAWTFAGEGKRV
Ga0310909_114998301	3300031947	Soil	MKSTETSLSSHVLKQSQPEEFDLVILGGGTGSTIAAWTFAGEEKRVA
Ga0307479_100838481	3300031962	Hardwood Forest Soil	MKSTETSPSAHVFKKTQPEEFDLLILGGGTGSTIA
Ga0307471_1001748404	3300032180	Hardwood Forest Soil	MKSAKTSPSAHVLKRSQPEEFDLVILGGGTGSTVAAW
Ga0307471_1032353591	3300032180	Hardwood Forest Soil	MTSTKNDSATQARKKTLPEEFDLVILGGGTGSTIAAWTFA
Ga0307472_1007928772	3300032205	Hardwood Forest Soil	MNSTKNASSAQARKNTQPEEFDLVILGGGTGSTIAAWTFAGEGKQ
Ga0348332_141206151	3300032515	Plant Litter	MKTADNNSAAESNNQTAAEEYDVVILGGGTGSTVAAWTFA
Ga0335079_102587941	3300032783	Soil	MQTTEKASSAEAVTRAKPEEYDLVIFGGGTGSTLAA
Ga0335078_103728631	3300032805	Soil	MKSRDNSSHAQVVKNTQPEEFDVVILGGGTGSTVAAWTFASEGKR
Ga0335078_114362233	3300032805	Soil	MTRSESSSSVHSVRSVQAEDFDLSILGGGTGWTIAAWTFAS
Ga0335072_110882701	3300032898	Soil	MNGTANNSSPPVPKPHIEEFDLVILGGGTGSTIAAWTFAGRG
Ga0335072_117743261	3300032898	Soil	MATTEAVPSAQLVKDTKPEEYDLVILGGGTGSTVAAWTFAGQGKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032781

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences