Metagenome / Metatranscriptome Family F032944

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032944
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	46 residues
Representative Sequence	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGD
Number of Associated Samples	112
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.07 %
% of genes near scaffold ends (potentially truncated)	98.88 %
% of genes from short scaffolds (< 2000 bps)	92.13 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.236 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.809 % of family members)
Environment Ontology (ENVO)	Unclassified (75.843 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.247 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.43% β-sheet: 0.00% Coil/Unstructured: 69.57%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF04392	ABC_sub_bind	22.47
PF17201	Cache_3-Cache_2	6.74
PF10417	1-cysPrx_C	3.93
PF07813	LTXXQ	3.37
PF03401	TctC	2.81
PF07369	DUF1488	2.81
PF01068	DNA_ligase_A_M	2.25
PF13412	HTH_24	2.25
PF07045	DUF1330	1.69
PF13467	RHH_4	0.56
PF05532	CsbD	0.56
PF02371	Transposase_20	0.56
PF13577	SnoaL_4	0.56
PF00536	SAM_1	0.56
PF07228	SpoIIE	0.56
PF02743	dCache_1	0.56
PF05974	DUF892	0.56
PF02518	HATPase_c	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	22.47
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	13.48
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.81
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.25
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.25
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.69
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.56
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.56
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.56
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.75 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.51 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.60 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	15.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.87 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.81 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.87 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.81 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	1.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.87 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.81 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.25 %
Methylocystis hirsuta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis hirsuta	1.12 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.87 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.81 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.25 %
Bradyrhizobium sp. URHA0002	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0002	1.12 %
Methylocystis hirsuta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis hirsuta	1.12 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02JC0X8	Not Available	510	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10008525	Not Available	2824	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10088753	Not Available	769	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1029023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1024	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10017378	Not Available	1733	Open in IMG/M
3300005332\|Ga0066388_102730205	Not Available	901	Open in IMG/M
3300005363\|Ga0008090_10199401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2501	Open in IMG/M
3300005436\|Ga0070713_101121109	Not Available	761	Open in IMG/M
3300005439\|Ga0070711_100264648	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300005467\|Ga0070706_100537349	Not Available	1087	Open in IMG/M
3300005467\|Ga0070706_101644176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0002	585	Open in IMG/M
3300005471\|Ga0070698_100786079	Not Available	895	Open in IMG/M
3300005616\|Ga0068852_100410431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1334	Open in IMG/M
3300005713\|Ga0066905_101768505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	569	Open in IMG/M
3300005713\|Ga0066905_102125993	Not Available	522	Open in IMG/M
3300006852\|Ga0075433_11444735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0002	594	Open in IMG/M
3300010043\|Ga0126380_11277196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	637	Open in IMG/M
3300010046\|Ga0126384_10434533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1117	Open in IMG/M
3300010048\|Ga0126373_12664356	Not Available	558	Open in IMG/M
3300010358\|Ga0126370_11710963	Not Available	606	Open in IMG/M
3300010359\|Ga0126376_10531147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1096	Open in IMG/M
3300010360\|Ga0126372_10208783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1634	Open in IMG/M
3300010361\|Ga0126378_10410947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1466	Open in IMG/M
3300010362\|Ga0126377_11739495	Not Available	699	Open in IMG/M
3300010366\|Ga0126379_12999545	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010366\|Ga0126379_13271669	Not Available	543	Open in IMG/M
3300010398\|Ga0126383_11066673	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300012201\|Ga0137365_10409489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1000	Open in IMG/M
3300012205\|Ga0137362_11093618	Not Available	678	Open in IMG/M
3300012362\|Ga0137361_11663385	Not Available	558	Open in IMG/M
3300012948\|Ga0126375_11404061	Not Available	592	Open in IMG/M
3300012948\|Ga0126375_11848007	Not Available	529	Open in IMG/M
3300012971\|Ga0126369_10709879	Not Available	1083	Open in IMG/M
3300012971\|Ga0126369_13676447	Not Available	503	Open in IMG/M
3300012986\|Ga0164304_11674816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300016270\|Ga0182036_10372947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300016270\|Ga0182036_11537159	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300016319\|Ga0182033_10254636	Not Available	1428	Open in IMG/M
3300016319\|Ga0182033_11205334	Not Available	678	Open in IMG/M
3300016341\|Ga0182035_10496037	Not Available	1042	Open in IMG/M
3300016341\|Ga0182035_11107883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	705	Open in IMG/M
3300016357\|Ga0182032_10286391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1295	Open in IMG/M
3300016357\|Ga0182032_10489357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1010	Open in IMG/M
3300016357\|Ga0182032_11274585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	634	Open in IMG/M
3300016357\|Ga0182032_11995066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300016371\|Ga0182034_11572317	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300016387\|Ga0182040_10121108	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300016387\|Ga0182040_10425922	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300016387\|Ga0182040_10490001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300016387\|Ga0182040_10661671	Not Available	851	Open in IMG/M
3300016387\|Ga0182040_11715965	Not Available	536	Open in IMG/M
3300016387\|Ga0182040_11839626	Not Available	519	Open in IMG/M
3300016404\|Ga0182037_10310257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1272	Open in IMG/M
3300016404\|Ga0182037_10461469	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300016404\|Ga0182037_11414274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	615	Open in IMG/M
3300016404\|Ga0182037_12122828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	505	Open in IMG/M
3300016445\|Ga0182038_10242142	Not Available	1445	Open in IMG/M
3300016445\|Ga0182038_10458160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300021170\|Ga0210400_11015931	Not Available	674	Open in IMG/M
3300021478\|Ga0210402_11642288	Not Available	569	Open in IMG/M
3300021560\|Ga0126371_12750800	Not Available	596	Open in IMG/M
3300021560\|Ga0126371_13732775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300025898\|Ga0207692_10527408	Not Available	752	Open in IMG/M
3300025910\|Ga0207684_10054836	All Organisms → cellular organisms → Bacteria → Proteobacteria	3382	Open in IMG/M
3300026308\|Ga0209265_1205351	Not Available	532	Open in IMG/M
3300031543\|Ga0318516_10086490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1755	Open in IMG/M
3300031545\|Ga0318541_10253790	Not Available	977	Open in IMG/M
3300031546\|Ga0318538_10157498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1202	Open in IMG/M
3300031549\|Ga0318571_10224549	Not Available	681	Open in IMG/M
3300031561\|Ga0318528_10099222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1527	Open in IMG/M
3300031561\|Ga0318528_10205460	Not Available	1054	Open in IMG/M
3300031561\|Ga0318528_10320275	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300031573\|Ga0310915_10108558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1883	Open in IMG/M
3300031573\|Ga0310915_10237034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M
3300031573\|Ga0310915_10258279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1226	Open in IMG/M
3300031573\|Ga0310915_10322876	Not Available	1092	Open in IMG/M
3300031573\|Ga0310915_10388764	Not Available	990	Open in IMG/M
3300031573\|Ga0310915_10704910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	712	Open in IMG/M
3300031640\|Ga0318555_10259983	Not Available	938	Open in IMG/M
3300031679\|Ga0318561_10127872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1354	Open in IMG/M
3300031679\|Ga0318561_10400557	Not Available	754	Open in IMG/M
3300031680\|Ga0318574_10317273	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300031681\|Ga0318572_10045624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2344	Open in IMG/M
3300031681\|Ga0318572_10350412	Not Available	875	Open in IMG/M
3300031682\|Ga0318560_10218909	Not Available	1019	Open in IMG/M
3300031713\|Ga0318496_10227379	Not Available	1027	Open in IMG/M
3300031713\|Ga0318496_10857643	Not Available	500	Open in IMG/M
3300031719\|Ga0306917_10574077	Not Available	886	Open in IMG/M
3300031736\|Ga0318501_10099208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1450	Open in IMG/M
3300031744\|Ga0306918_10478350	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300031744\|Ga0306918_10518432	Not Available	933	Open in IMG/M
3300031744\|Ga0306918_10747754	Not Available	764	Open in IMG/M
3300031748\|Ga0318492_10184513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1063	Open in IMG/M
3300031763\|Ga0318537_10119182	Not Available	980	Open in IMG/M
3300031763\|Ga0318537_10268928	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031763\|Ga0318537_10338715	Not Available	556	Open in IMG/M
3300031765\|Ga0318554_10074974	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300031771\|Ga0318546_10347057	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031771\|Ga0318546_10651061	Not Available	741	Open in IMG/M
3300031777\|Ga0318543_10149173	Not Available	1027	Open in IMG/M
3300031777\|Ga0318543_10455438	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031781\|Ga0318547_10322467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	941	Open in IMG/M
3300031782\|Ga0318552_10251065	Not Available	898	Open in IMG/M
3300031795\|Ga0318557_10506623	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031796\|Ga0318576_10492505	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031797\|Ga0318550_10534840	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300031798\|Ga0318523_10052043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1927	Open in IMG/M
3300031805\|Ga0318497_10100424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1552	Open in IMG/M
3300031819\|Ga0318568_10066601	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300031832\|Ga0318499_10105445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1091	Open in IMG/M
3300031835\|Ga0318517_10559936	Not Available	514	Open in IMG/M
3300031845\|Ga0318511_10438907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031859\|Ga0318527_10316048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	665	Open in IMG/M
3300031879\|Ga0306919_11526810	Not Available	502	Open in IMG/M
3300031890\|Ga0306925_10107530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2973	Open in IMG/M
3300031893\|Ga0318536_10225387	Not Available	954	Open in IMG/M
3300031894\|Ga0318522_10036868	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300031896\|Ga0318551_10865913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	526	Open in IMG/M
3300031897\|Ga0318520_10959072	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031910\|Ga0306923_10560525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1286	Open in IMG/M
3300031910\|Ga0306923_12468021	Not Available	513	Open in IMG/M
3300031912\|Ga0306921_10123654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3016	Open in IMG/M
3300031912\|Ga0306921_10562647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1321	Open in IMG/M
3300031912\|Ga0306921_10800341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1076	Open in IMG/M
3300031912\|Ga0306921_11192107	Not Available	848	Open in IMG/M
3300031942\|Ga0310916_11445438	Not Available	562	Open in IMG/M
3300031945\|Ga0310913_10357052	Not Available	1034	Open in IMG/M
3300031945\|Ga0310913_10871943	Not Available	633	Open in IMG/M
3300031946\|Ga0310910_10174094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1658	Open in IMG/M
3300031947\|Ga0310909_10858128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300031954\|Ga0306926_10768690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis hirsuta	1163	Open in IMG/M
3300031954\|Ga0306926_11215810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	884	Open in IMG/M
3300031959\|Ga0318530_10023243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2151	Open in IMG/M
3300031959\|Ga0318530_10069741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300032001\|Ga0306922_10074916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3545	Open in IMG/M
3300032001\|Ga0306922_10461021	Not Available	1357	Open in IMG/M
3300032001\|Ga0306922_10614773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1150	Open in IMG/M
3300032001\|Ga0306922_11395222	Not Available	704	Open in IMG/M
3300032025\|Ga0318507_10043042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1745	Open in IMG/M
3300032035\|Ga0310911_10269800	Not Available	976	Open in IMG/M
3300032035\|Ga0310911_10466772	Not Available	731	Open in IMG/M
3300032039\|Ga0318559_10308758	Not Available	734	Open in IMG/M
3300032039\|Ga0318559_10384075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654	Open in IMG/M
3300032042\|Ga0318545_10305092	Not Available	572	Open in IMG/M
3300032043\|Ga0318556_10061361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis hirsuta	1841	Open in IMG/M
3300032051\|Ga0318532_10075445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1176	Open in IMG/M
3300032051\|Ga0318532_10111059	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300032052\|Ga0318506_10423787	Not Available	590	Open in IMG/M
3300032054\|Ga0318570_10032646	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300032054\|Ga0318570_10086715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1352	Open in IMG/M
3300032054\|Ga0318570_10276620	Not Available	762	Open in IMG/M
3300032055\|Ga0318575_10136444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1212	Open in IMG/M
3300032059\|Ga0318533_10272074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1225	Open in IMG/M
3300032059\|Ga0318533_10276877	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300032059\|Ga0318533_10298024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1169	Open in IMG/M
3300032059\|Ga0318533_10319354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1128	Open in IMG/M
3300032059\|Ga0318533_10339292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1093	Open in IMG/M
3300032060\|Ga0318505_10034539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2087	Open in IMG/M
3300032064\|Ga0318510_10070854	Not Available	1277	Open in IMG/M
3300032065\|Ga0318513_10041054	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300032066\|Ga0318514_10129879	Not Available	1296	Open in IMG/M
3300032068\|Ga0318553_10271046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	887	Open in IMG/M
3300032068\|Ga0318553_10337565	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300032090\|Ga0318518_10034914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2325	Open in IMG/M
3300032090\|Ga0318518_10053810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1921	Open in IMG/M
3300032091\|Ga0318577_10428762	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300032094\|Ga0318540_10137263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1167	Open in IMG/M
3300032261\|Ga0306920_100328114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2278	Open in IMG/M
3300032261\|Ga0306920_103461325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	584	Open in IMG/M
3300032893\|Ga0335069_11758383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300033289\|Ga0310914_10593213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	999	Open in IMG/M
3300033289\|Ga0310914_10841258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	816	Open in IMG/M
3300033289\|Ga0310914_11623091	Not Available	550	Open in IMG/M
3300033289\|Ga0310914_11830238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	511	Open in IMG/M
3300033290\|Ga0318519_10065734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1866	Open in IMG/M
3300033290\|Ga0318519_10087228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1655	Open in IMG/M
3300033290\|Ga0318519_10108007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1507	Open in IMG/M
3300033290\|Ga0318519_10164758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1247	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.88%
Host-Associated	Host-Associated	1.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.88%
Plants	Host-Associated → Plants	1.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.70%
Loam	Environmental → Terrestrial → Soil → Loam	5.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.12%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.56%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.56%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_10161080	2170459010	Grass Soil	VQRREFIILLAGAALIGPPTAIAQTPKVYRLGTLTAGAPMSPASGEGAVLIGAL
AF_2010_repII_A1DRAFT_100085251	3300000597	Forest Soil	VRRRQFITLLGGAALIGPSTAIAQTPKVYRLGTLTTGPPMSPAS
AF_2010_repII_A1DRAFT_100887531	3300000597	Forest Soil	VQRREFITLLAGAALIGPSTAIAQTQTPKVYRLGT
AF_2010_repII_A100DRAFT_10290231	3300000655	Forest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMVPSGDAAVLIGAL
AF_2010_repII_A001DRAFT_100173784	3300000793	Forest Soil	VRRREFITLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVL
Ga0066388_1027302051	3300005332	Tropical Forest Soil	MPFDRLKRRDFITLLGGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGA
Ga0008090_101994011	3300005363	Tropical Rainforest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPDSGD
Ga0070713_1011211092	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHFNQLKRREFITFLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDAT
Ga0070711_1002646482	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MHFNQLKRREFITFLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDATVLISALTQRG*
Ga0070706_1005373494	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSP
Ga0070706_1016441761	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSP
Ga0070698_1007860792	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPM
Ga0068852_1004104313	3300005616	Corn Rhizosphere	MRRREFITLLTGAAMAGPRLAQAQPSKVYRLATLN
Ga0066905_1017685052	3300005713	Tropical Forest Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTSGPPMSPASALRGNGLQGVVE*
Ga0066905_1021259932	3300005713	Tropical Forest Soil	VRRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPAS
Ga0075433_114447351	3300006852	Populus Rhizosphere	LDYSRMCGHVMQRREFITLLAGAALIGPLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMS
Ga0126380_112771961	3300010043	Tropical Forest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTA
Ga0126384_104345331	3300010046	Tropical Forest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGD
Ga0126373_126643561	3300010048	Tropical Forest Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPASGDAAV
Ga0126370_117109631	3300010358	Tropical Forest Soil	MQFNQLKRREFITLLAGAALIAPPAAIAQKPKVYRLGTLT
Ga0126376_105311472	3300010359	Tropical Forest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDAAVL
Ga0126372_102087831	3300010360	Tropical Forest Soil	MAMACGIGWRQSVQRREFIALLAGAALIGPSRAIAQTPKVYRLGTLTAGPPMSPASGDAAVLI
Ga0126378_104109471	3300010361	Tropical Forest Soil	VQRRELITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDA
Ga0126377_117394951	3300010362	Tropical Forest Soil	MHFNQLKRREFITLLAGAALVGPPTAIAQKPKVYRLGTLTAGPPMSPASGDAAVLIG
Ga0126379_129995451	3300010366	Tropical Forest Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTTGPPMSPASGDAAVLI
Ga0126379_132716691	3300010366	Tropical Forest Soil	MRDRCRQSVQRREFITLLAGAALIGPSTAIAQTPKVYRLGT
Ga0126383_110666732	3300010398	Tropical Forest Soil	VQRRQFITLLAGTALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDAAVL
Ga0137365_104094891	3300012201	Vadose Zone Soil	ITLLAASALIGPPTAAQTPKVYRLGTLTAGSPMSPASGDAAKPVVRRAN*
Ga0137362_110936181	3300012205	Vadose Zone Soil	VQRREFITLLGGAALIGPPTAIAQTPKVYRLGTLTAGPPM
Ga0137361_116633852	3300012362	Vadose Zone Soil	MTRRAFITLLAGAALIGPRTAIAQTPKVYRLGTLTAG
Ga0126375_114040611	3300012948	Tropical Forest Soil	MHFNQLKRREFITLLAGAALIGPSTSIAQTPRLYRLGTLTAGPPMSPDSGDGAVLIG
Ga0126375_118480071	3300012948	Tropical Forest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGPPMSPD
Ga0126369_107098793	3300012971	Tropical Forest Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDS
Ga0126369_136764472	3300012971	Tropical Forest Soil	MHFRQVKRRDFITLLGGASLIAPSAAIAQTPKVYRLGTLTAGPPM
Ga0164304_116748161	3300012986	Soil	VQRREFITLVAGAALIGPRTAIAQTPKVYRLGTLTAGPPMTPASGDA
Ga0182036_103729471	3300016270	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMS
Ga0182036_115371591	3300016270	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLT
Ga0182033_102546364	3300016319	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDSGDA
Ga0182033_112053341	3300016319	Soil	VQRREFITLLTGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPASGDAAV
Ga0182035_104960372	3300016341	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGALTQR
Ga0182035_111078832	3300016341	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPDSGDAAVLIG
Ga0182032_102863913	3300016357	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGD
Ga0182032_104893572	3300016357	Soil	MRDRMEQSVQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDG
Ga0182032_112745851	3300016357	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPDSGDAAV
Ga0182032_119950662	3300016357	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPAS
Ga0182034_115723172	3300016371	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTA
Ga0182040_101211081	3300016387	Soil	VQRREFITLLAGAALIGPSTVIAQTPKVYRLGTAA
Ga0182040_104259221	3300016387	Soil	VQRREFITLLAGAALIGPPTVIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGALT
Ga0182040_104900012	3300016387	Soil	MRDRMEQSVQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLT
Ga0182040_106616711	3300016387	Soil	VQRREFIILLAGAALIGPPTAIAQTRKVYRLGTLT
Ga0182040_117159652	3300016387	Soil	VQRREFITLLTGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPAS
Ga0182040_118396261	3300016387	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMS
Ga0182037_103102573	3300016404	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGAL
Ga0182037_104614693	3300016404	Soil	VQRREFITLLAGAALIGPPTVIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGALTQ
Ga0182037_114142741	3300016404	Soil	MAMACGIGWRQSVQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGA
Ga0182037_121228281	3300016404	Soil	VRRREFITLLAGAALIRPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGAL
Ga0182038_102421424	3300016445	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGA
Ga0182038_104581602	3300016445	Soil	MRDRMEQSVQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASG
Ga0210400_110159311	3300021170	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAG
Ga0210402_116422882	3300021478	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPT
Ga0126371_127508001	3300021560	Tropical Forest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLT
Ga0126371_137327751	3300021560	Tropical Forest Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGT
Ga0207692_105274081	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MHFNQLKRREFITFLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDATVLIS
Ga0207684_100548361	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VQRREFITLLAGAALIGPPTAIAQTPKVYRLVRLQLPL
Ga0209265_12053511	3300026308	Soil	VQRREFITLLAGAALIGPRTAIAQTPKVYRLGTLTA
Ga0318516_100864901	3300031543	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPMSPD
Ga0318541_102537902	3300031545	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAV
Ga0318538_101574981	3300031546	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPM
Ga0318571_102245492	3300031549	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPM
Ga0318528_100992222	3300031561	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLT
Ga0318528_102054601	3300031561	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAV
Ga0318528_103202752	3300031561	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAG
Ga0310915_101085581	3300031573	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPP
Ga0310915_102370341	3300031573	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVHRLGTLTA
Ga0310915_102582792	3300031573	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTA
Ga0310915_103228763	3300031573	Soil	VQRREFIILLAGAALIGPPTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIG
Ga0310915_103887642	3300031573	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPP
Ga0310915_107049101	3300031573	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDAAVLIGALTQR
Ga0318555_102599831	3300031640	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPD
Ga0318561_101278724	3300031679	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMGPASGDAAVLI
Ga0318561_104005572	3300031679	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPDSGD
Ga0318574_103172732	3300031680	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMGPASGDAAVSVP
Ga0318572_100456241	3300031681	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGPP
Ga0318572_103504122	3300031681	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDSGDGAVLI
Ga0318560_102189091	3300031682	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSP
Ga0318496_102273793	3300031713	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLI
Ga0318496_108576432	3300031713	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDAAV
Ga0306917_105740772	3300031719	Soil	VRRREFITLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGALTQR
Ga0318501_100992081	3300031736	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGPPMSPASGDATVLIG
Ga0306918_104783503	3300031744	Soil	VQRREFITLLTGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPASGD
Ga0306918_105184321	3300031744	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPMSPD
Ga0306918_107477541	3300031744	Soil	VRRREFITLLAGAALIRPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGALTQR
Ga0318492_101845131	3300031748	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDG
Ga0318537_101191821	3300031763	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVHRLGTLTAGPPMSPGSG
Ga0318537_102689281	3300031763	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPM
Ga0318537_103387151	3300031763	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPMSPDSGD
Ga0318554_100749744	3300031765	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPSALQRG
Ga0318546_103470571	3300031771	Soil	VRWREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMS
Ga0318546_106510611	3300031771	Soil	MRDRMEQSVQRREFITLLAGAALIGPSTAIAQTPTVY
Ga0318543_101491731	3300031777	Soil	VQRREFIILLAGAALIGPPTAIAQTRKVYRLGTLTAGPPMSPD
Ga0318543_104554382	3300031777	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSP
Ga0318547_103224673	3300031781	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTL
Ga0318552_102510651	3300031782	Soil	VQRREFIILLAGAALIGPPTAIAQTRKVYRLGTLTA
Ga0318557_105066232	3300031795	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTA
Ga0318576_104925051	3300031796	Soil	MAMACGIGWRQSVQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPASGDAA
Ga0318550_105348402	3300031797	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYR
Ga0318523_100520434	3300031798	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMGPASG
Ga0318497_101004241	3300031805	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGPPMSPASGDAAVLIG
Ga0318568_100666011	3300031819	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAV
Ga0318499_101054453	3300031832	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGPPMSPASGD
Ga0318517_105599362	3300031835	Soil	VRRREFITLLAGAALIRPSTAIAQTRKVYRLGTLTAGPPM
Ga0318511_104389072	3300031845	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGP
Ga0318527_103160482	3300031859	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDAAVLIGALT
Ga0306919_115268101	3300031879	Soil	VQRREFITLLTGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPASG
Ga0306925_101075304	3300031890	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGAL
Ga0318536_102253872	3300031893	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAG
Ga0318522_100368681	3300031894	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPM
Ga0318551_108659131	3300031896	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGPPM
Ga0318520_109590721	3300031897	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRL
Ga0306923_105605252	3300031910	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPASGD
Ga0306923_124680211	3300031910	Soil	VQRREFITLLAGAALIGPSRAIAQTPKVYRLGTLTAGPPMSP
Ga0306921_101236544	3300031912	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPSALQRGD
Ga0306921_105626473	3300031912	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDGAVL
Ga0306921_108003413	3300031912	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVL
Ga0306921_111921072	3300031912	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPD
Ga0310916_114454382	3300031942	Soil	VRRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAA
Ga0310913_103570521	3300031945	Soil	VQRREFIILLAGAALIGPPTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVL
Ga0310913_108719432	3300031945	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPM
Ga0310910_101740941	3300031946	Soil	MEQSVQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDGAVLIG
Ga0310909_108581281	3300031947	Soil	VRRREFITLLAGAALIRPSTAIAQTRKVYRLGTLTAGPPMSPDS
Ga0306926_107686901	3300031954	Soil	VQRREFIILLAGAALIGPPTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLI
Ga0306926_112158101	3300031954	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIG
Ga0318530_100232435	3300031959	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPASGDAAVLI
Ga0318530_100697411	3300031959	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPDSGDAA
Ga0306922_100749164	3300032001	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPDSG
Ga0306922_104610214	3300032001	Soil	VRRREFITLLAGAALIGPSTSIAQTPRVYRLGTLTAG
Ga0306922_106147731	3300032001	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDGAVLIGA
Ga0306922_113952221	3300032001	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPDSGD
Ga0318507_100430424	3300032025	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTA
Ga0310911_102698001	3300032035	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPAS
Ga0310911_104667723	3300032035	Soil	VQRREFITLLTGAALIGPPTAIAQTPKVYRLGTLTAGPPMSP
Ga0318559_103087582	3300032039	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGP
Ga0318559_103840751	3300032039	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPDSGDAAVL
Ga0318545_103050922	3300032042	Soil	VRRREFITLLAGAALIEPSTAIAQTRKVYRLGTLTAGPPMSPASGD
Ga0318556_100613611	3300032043	Soil	VQRREFIILLAGAALIGPPTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVSV
Ga0318532_100754452	3300032051	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGA
Ga0318532_101110591	3300032051	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMGPASGDA
Ga0318506_104237872	3300032052	Soil	MQRREFITLLAGAALIGPLAGAALIGPPTAIAQTPKVYRLGTLTAGPPISPASGDGAVLI
Ga0318570_100326466	3300032054	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMGPASGDAAV
Ga0318570_100867151	3300032054	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLG
Ga0318570_102766201	3300032054	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTA
Ga0318575_101364443	3300032055	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGALT
Ga0318533_102720741	3300032059	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGALT
Ga0318533_102768773	3300032059	Soil	MRDRMEQSVQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMS
Ga0318533_102980241	3300032059	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDGAVLIG
Ga0318533_103193542	3300032059	Soil	VQRREFITLLTGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPDSGDAAVLI
Ga0318533_103392921	3300032059	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTA
Ga0318505_100345393	3300032060	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLGTLTAGPPMSPASGDAAVLI
Ga0318510_100708541	3300032064	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAG
Ga0318513_100410544	3300032065	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPSALQRAR
Ga0318514_101298791	3300032066	Soil	VRRREFVTLLAGAALIGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDG
Ga0318553_102710462	3300032068	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPASGDAAVL
Ga0318553_103375652	3300032068	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAG
Ga0318518_100349145	3300032090	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVSKVYRLG
Ga0318518_100538101	3300032090	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPA
Ga0318577_104287621	3300032091	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGTLTAGPPMSPASGDAAVLIG
Ga0318540_101372631	3300032094	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPMS
Ga0306920_1003281141	3300032261	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVHRLGTLTAGPPMSPGSGD
Ga0306920_1034613251	3300032261	Soil	VRRREFITLLAGAALIRPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGALTQ
Ga0335069_117583832	3300032893	Soil	MHRRKFTALLAGAALAGPRAALAETSRVYRLGTLTGGAPMNAT
Ga0310914_105932132	3300033289	Soil	MHFNQLKRREFITLLAGAALIGPPTAIAQKPKVYRLGT
Ga0310914_108412581	3300033289	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPASGDGAVLIGA
Ga0310914_116230911	3300033289	Soil	MRDRMEQSVQRREFITLLAGAALIGPSTAIAQTPKVY
Ga0310914_118302381	3300033289	Soil	VQRREFITLLAGAALIGPSKAIAQTPKVYRLGTLTAGPPMSPASGDAAVLIGAL
Ga0318519_100657341	3300033290	Soil	VQRREFITLLAGAALIGPSTAIAQTPKVYRLGTLTAGPPMSPASGDAAVLI
Ga0318519_100872281	3300033290	Soil	VQRREFIALLAGAALIGPSTVIAQTPKVYRLGTAARLHA
Ga0318519_101080071	3300033290	Soil	VQRREFITLLAGAALIGPPTAIAQTPKVYRLGTLTAGPPMSPDSG
Ga0318519_101647581	3300033290	Soil	VQRREFITLLAGAALVGPSTAIAQTRKVYRLGTLTAGPPMSPDSGDAAVLIGGPAVSVPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032944

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences